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Measuring covariate data_Presentation (November 14, 2007) 1 Measuring covariate Measuring covariate data in subsets of data in subsets of study populations: study populations: Design options Design options Jean-François Boivin, MD, ScD McGill University 19 August 2007

Measuring covariate data in subsets of study populations: Design options

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Measuring covariate data in subsets of study populations: Design options. Jean-François Boivin, MD, ScD McGill University 19 August 2007. 16 th International Conference on Pharmacoepidemiology Barcelona 2000. What about missing covariate data?. Option #1. Do not research that topic. - PowerPoint PPT Presentation

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  • Measuring covariate data in subsets of study populations: Design optionsJean-Franois Boivin, MD, ScDMcGill University19 August 2007

    Measuring covariate data_Presentation (November 14, 2007)

  • 16th International Conference on Pharmacoepidemiology Barcelona 2000

  • What about missing covariate data?

  • Do not research that topicOption #1

  • Conduct study without covariatesScientifically reasonable for certain questionsExample: Sharpe et al. 2000Option #2

  • British Journal of Cancer 2002The effects of tricyclic antidepressants on breast cancer riskGenotoxicity in Drosophila

    Comparison of antidepressants:6 genotoxic vs 4 nongenotoxic Confounding unlikely

  • Option #3Confounding by other determinants was studied in analyses with data obtained by interviewing samples of subjects

  • List 4 - 6 different sampling strategies:Confounding by other determinants was studied in analyses with data obtained by interviewing samples of subjectsa) ?b) ?c) ?d) ?

  • Two-stage sampling

  • Entire population (=truth)OR=0.5OR=0.5OR=2.5ObeseNot obeseAllE+E-D+D+D+D-D-D-12,00014010,20010,40022,20010,54032,740

    2,0004010,000100

    20040010,00010,000

    2,20044020,00010,100

  • ObeseNot obeseAllE+E-D+D+D-D-22,20010,540not availablecomputerized databasesD+D-

    2,20044020,00010,100

  • Two-stage sampling

  • ObeseNot obeseAllE+E-D+D-D+D-D+D-Two-stage samplingOR1 biasedOR2 biased250 x 250 250 x 250= 1

    250/250/250/250/

    2,200 440 20,000 10,100 32,740

    227231252

    23227125248

  • White. AJE 1982Walker. Biometrics 1982Cain, Breslow. AJE 1988Weinberg, Wacholder. Biometrics 1990Weinberg, Sandler. AJE 1991Statistical analysis; further design issues

  • Option 1:Option 2:Option 3:Option 4: No study No covariate measurement 2-stage sampling Case only measurement

  • Ray et al.Archives of Internal Medicine 1991

  • Cyclic antidepressants and the risk of hip fracture

  • E+E-AllD+D-D+D-D+D-AllNot obeseObeseConfounding: Quick review

    RR=0.5

    RR=0.5

    RR=

    RR=0.5

    N1=?N2=?

    RR=0.5

    N3=?N4=?

    RR=

    RR=0.5

    N1=1,000 N2=1,000

    RR=0.5

    N3=1,000N4=1,000

    RR=0.5

    RR=0.5

    N1=1,000 N2=1,000cross-product ratio =1

    RR=0.5

    N3=1,000N4=1,000

    RR=

    RR=0.5

    N1=1,000 N2=1,000

    RR=0.5

    N3=1,000N4=1,000

    RR=

  • ObeseNot obeseAllD+D+D+D-D-D-E+E-Case-control study

    OR=0.5

    OR=0.5

    OR=

    OR=0.55001,500

    OR=0.51,0003,000

    OR=

    OR=0.5

    OR=0.5

    OR=0.5

    OR=0.5

    cross-product ratio =1

    OR=0.5

    OR=

  • Cyclic antidepressants and the risk of hip fracture

  • E+E-D+ObeseNot obeseAllD-D+D-D+D-Covariate data on cases only

    2,200440computerized database20,00010,10022,20010,540

    medical record review

    2,200440computerized database20,00010,10022,20010,540

    2,000400??

    20040??

    2,20044020,00010,10022,20010,540

  • E+E-D+ObeseNot obeseAllD-D+D-D+D-assume OR1 = OR2then: cross-product ratio =1 implies no confoundingCovariate data on cases only

    2,000400??

    20040??

    2,20044020,00010,10022,20010,540

    OR1

    OR2

  • What if confounding seems to be present?Extensions

  • Option 1: No studyOption 2: No covariate measurementOption 3: 2-stage samplingOption 4: Case only measurements Suissa, Edwardes. 1997

  • Confounder data on cases onlyObeseNot obeseE+E-D+D-Cross-product ratio =10Confounding plausibleD+D-

    2,000220??

    200220??

  • Epidemiology 1997Extensions of Rays method to presence of confoundingRequires additional data from external sources

  • SmokerNonsmokerAllE+E-D+D+D+D-D-D-TheophyllineConfounding; no interaction

    1713309563,1544,080

    14519

    3811

    14519 24% of 4,080

    3811 76% of 4,080

    14519 24% of 4,080obtained from population survey

    3811 76% of 4,080

  • Extensions of Rays method to presence of interactionRequires further additional data from external sourcesSuissa, Edwardes. 1997

  • No interactionOR=0.5OR=0.5ObeseNot obeseE+E-D+D+D-D-12,00014010,20010,400

    2,0004010,000100

    20040010,00010,000

  • Option 1: No studyOption 2: No covariate measurementOption 3: 2-stage samplingOption 4: Case only measurementsSuissa, Edwardes. 1997Multi-stage samplingPartial questionnairesPropensity score adjustmentsOthers:

  • Monotone missingness

  • Wacholder S, et al.

  • Cov 12345678Subject 12345678910n

    Cov 12345678Subject 12345678910n

    Cov 12345678Subject 12345678910n

    Cov 12345678Subject 12345678910n

    Cov 12345678Subject 12345678910n

    Cov 12345678Subject 12345678910n

    Cov 12345678Subject 12345678910n

    Cov 12345678Subject 12345678910n

    Cov 12345678Subject 12345678910n

  • Wacholder S, et al.Restricted to a small number of discrete covariates

  • Methodologic researchStrmer et al. AJE 2005, 2007Propensity score calibration

  • Summarizes information about several covariates into a single number

    Used for matching, stratification, regressionPropensity score

  • Main cohort: selected covariates-error-prone scores estimated -regression coefficients estimated

    Sample: additional covariates-gold standard scores-regression calibration

    Advantage: multivariable techniqueStrmer et al. 2005

  • Until the validity and limitation of [propensity score calibration] have been assessed in different settings, the method should be seen as a sensitivity analysis.Strmer et al. 2005

  • Stage 1: 278 cases in 4561 pregnanciesStage 2: 244 cases + 728 non cases

  • Relatively few examples of two-and three-phase sampling designs for case-control studies have appeared to date in the epidemiologic literature.This is unfortunate, because the stratified designs are easy to implement and can result in substantial savings.

    NE Breslow (2000)

  • Consent for second-stage interviews: Cases: 49% Controls: 39%

  • [email protected]