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Integration Live ADMS inside an ELN: User benefits from integration

Live ADMS inside an ELN: User benefits from integration

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Page 1: Live ADMS inside an ELN: User benefits from integration

Integration

Live ADMS inside an ELN: User benefits from integration

Page 2: Live ADMS inside an ELN: User benefits from integration

Tools availableTools available

• Database connections: SQL/ODBCDatabase connections: SQL/ODBC• Web Services: read and write

S b • Screen scrape web pages• Run executables

Page 3: Live ADMS inside an ELN: User benefits from integration

Database ConnectionDatabase Connection

• Customer created structure Customer created structure repository

• Pull metadata as text and mol file as • Pull metadata as text and mol file as CLOBI t i ACD t l d t b• Incorporate in ACD spectral database

Page 4: Live ADMS inside an ELN: User benefits from integration

Build QueryBuild Query

Page 5: Live ADMS inside an ELN: User benefits from integration

Run QueryRun Query

Page 6: Live ADMS inside an ELN: User benefits from integration

Web ServicesWeb Services

• ChemSpider is a ChemSpider is a repository of Chemical information

• Can use Web Services to look up molecule from CAS retrieve CAS, retrieve structure plus metadatametadata

Page 7: Live ADMS inside an ELN: User benefits from integration

Import FID with CAS directory name

Page 8: Live ADMS inside an ELN: User benefits from integration

Automatically TransformAutomatically Transform

Page 9: Live ADMS inside an ELN: User benefits from integration

Attach StructureAttach Structure

Page 10: Live ADMS inside an ELN: User benefits from integration

Attach MetadataAttach Metadata

Page 11: Live ADMS inside an ELN: User benefits from integration

Make Webservice RequestMake Webservice Request

Page 12: Live ADMS inside an ELN: User benefits from integration

Process, Retrieve, AttachProcess, Retrieve, Attach

Page 13: Live ADMS inside an ELN: User benefits from integration

Webservice XML SkeletonWebservice XML Skeleton

Page 14: Live ADMS inside an ELN: User benefits from integration

Web Structure RepositoryWeb Structure Repository

• Customer has a Customer has a website with structures

• User submits an internal reference number

• Website returns a O f lMOL file

Page 15: Live ADMS inside an ELN: User benefits from integration

View Webpage with MOLView Webpage with MOL

Page 16: Live ADMS inside an ELN: User benefits from integration

ExecutablesExecutables

• “Print to” utilityPrint to utility• Use command line

Print to insert t to se treports into NuGenesis archive

Page 17: Live ADMS inside an ELN: User benefits from integration

ELN Integration DesignELN Integration Design

• ACD: • ELN Vendor:ACD:◦ Store UID from ELN

in SpecDB record

ELN Vendor:◦ Generate WL link

from UID and ◦ When displaying

spectrum, pull metadata for

display in ELN◦ Provide webservice

for obtaining metadata for display in specDB

◦ Generate PDF and

for obtaining metadata

◦ Parse and place in ELN hot folder

incorporate PDFs