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BIG DATA IN HEALTHCARE
JUHO PAASOVP of Engineering
BC PLATFORMS FROM DATA TO DISCOVERIES
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● Finnish-Swiss bioinformatics software company established in 1997.
○ Spin-off from a unique genome project with MIT based on unique population cohort in Finland.
● Pioneers in data management and analysis software for genetic research.
○ Solutions used in 20 countries at over 70 institutions.
○ Presence in Europe, Americas, Oceania and Asia.
● Focusing on three life science market segments:
○ Pharmaceutical and Biotech industry
○ Healthcare and Biobanks
○ Academia
● All have similar challenges in managing and analyzing growing, complex data in a systematic and secure manner.
BC Platforms
GENOMICS IN HEALTHCARE
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In media
https://www.hs.fi/kotimaa/art-2000005495317.html https://www.insurancejournal.com/news/national/2018/04/09/485681.htmhttps://www.hs.fi/tiede/art-2000005629221.html https://www.hs.fi/politiikka/art-2000005636644.html
A revolution in healthcare is happening now
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Genome data production
● Not expensive anymore○ 30 € - main risk factors
(genotyping).○ 1500 € - all known and
unknown factors (whole genome sequencing).
● Will become a common practice in healthcare○ Produced for each citizen.
● Enabling○ Better preventive care.○ More accurate diagnosis.○ Personalised healthcare.
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Moving beyond the one-size-fits-all approach to treatment
Genomic prediction of coronary heart disease Eur Heart J. I 2016;37(43):3267-3278. I doi:10.1093/eurheartj/ehw450
Genomic Risk Scoring
● Improves Coronary Heart Disease (sepelvaltimotauti) risk prediction.
● Encodes different trajectories of lifetime risk not captured by traditional clinical risk scores
Knowing your genetic risk factors
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CASE EXAMPLE BIG DATA IN HEALTHCARE
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University of Colorado ● Leading translational biomedical research
organization. ● Building a next-generation service platform with
○ 5M patients with clinical data.○ 500k with whole genome data.
● Data used in○ Healthcare○ Academic research○ Pharma collaboration
● Expect to have breakthrough innovations as well as everyday benefits in their clinical workflows.
Customer case in Healthcare & Biobank
“BC Platforms has delivered a high performing platform so that we can make a difference in next generation precision medicine research and clinical workflows .”— Dr. Kathleen Barnes, Director of Unit
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HEALTHCARE USE GENOMIC RESEARCH
Population scale
genotyping (500k)
Storage: 3 PB Calculation cluster:750 CPU cores
Genomedata
Pedigrees Public annotation databases
DataLake(COMPASS)
ElectronicHealth
Records
PHARMA INDUSTRYCOLLABORATION
5M clinical data
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Customer case in Healthcare & Biobank
GLOBAL ECOSYSTEM OF HEALTH DATA
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● We are building a global network of health data for○ Academic use○ Drug development○ AI model training
● Target is to have 5M patients with clinical and genome data by 2020.○ We have 70 customers in 20 countries collecting clinical and
genomic data.
● We are looking for partners to add value on this unique database.
Ecosystem of health data
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More about GeneVision and BC Platforms