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Immunodominant peptides derived from the heavy constant region of IgG1 stimulate natural regulatory T cells: identification of pan- HLA binders for clinical translation Alessandra Franco MD PhD UCSD School of Medicine Department of Pediatrics Division of Allergy Immunology and Rheumatology

Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications

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Page 1: Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications

Immunodominant peptides derived from the heavy constant region of IgG1 stimulate natural regulatory T cells: identification of pan-

HLA binders for clinical translation

Alessandra Franco MD PhDUCSD School of MedicineDepartment of Pediatrics

Division of Allergy Immunology and Rheumatology

Page 2: Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications

• Immune regulation is key in the immune homeostasis

• Immune regulation is key in the response to therapy in a large variety of immune-mediated diseases

Page 3: Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications

Two main human Treg lineages have been described

1) natural (n)Treg are derived from the thymus during fetal life and recognize self peptides.

2) peripherally-induced (i)Treg recognize not-self, arise from:a) naïve T cells under unique repeated stimulatory conditions (i.e.

transforming grow factor (TGF-b)

b) pro-inflammatory T cells (Th17, Th1, CD8+ cytotoxic T cells) following repeated antigenic stimulation (iTreg are specific for the pathogen)

Regulatory T cells phenotypically CD4+ CD25 high

Page 4: Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications

Kawasaki Disease: a disease model where immune regulation is key in the response to therapy

Page 5: Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications

• Kawasaki Disease (KD) is a self-limited T cell-mediated pediatric vasculitis of the coronary arteries.

• In San Diego County, the average incidence is 25/100,000 children <5 yrs. of age and approximately 80-90 new cases are diagnosed and treated each year by the KD Team at Rady Children's Hospital San Diego

• If untreated, 25% of children will develop aneurysms of the coronary arteries.

• Treatment with high dose intravenous immunoglobulin (IVIG) reduces the rate of aneurysms to 5%

Page 6: Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications

T helper 17 cells recruit CD8+ T cells (CTL) in the arterial walls

Human Pathology 2012

α-SMA α-SMA αSMA and IL17

Page 7: Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications
Page 8: Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications

Understanding IVIG therapy and its success in Kawasaki disease: Fc-specific Treg?

Page 9: Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications

Fc-specific Treg expand only in sub-acute KD subjects with normal arteries after IVIG

% C

D4+

CD

25hi

ghT

cells

subject 1 subject 2 subject 3 subject 4 subject 5

subject 6 subject 7 subject 8 subject 9 subject 10

subject 11 subject 12 subject 13 subject 14 subject 20

Fc µg/ml

0.01.53.0

No

Ag 1 10 100

0.01.53.0

No

Ag 1 10 100

0.01.53.0

No

Ag 1 10 100

0.01.53.0

No

Ag 1 10 100

0.01.53.0

No

Ag 1 10 100

0.01.53.0

No

Ag 1 10 100

0.01.53.0

No

Ag 1 10 100

0.01.53.0

No

Ag 1 10 100

0.01.53.0

No

Ag 1 10 100

0.01.53.0

No

Ag 1 10 100

0.01.53.0

No

Ag 1 10 100

0.01.53.0

No

Ag 1 10 100

0.01.53.0

No

Ag 1 10 100

0.01.53.0

No

Ag 1 10 100

Dilated arteries or aneurysm

CD4

CD

25

Control 1µg/ml 10µg/ml10µg/ml1µg/mlFc F(ab)2100µg/ml 100µg/ml

0.01.53.0

No

Ag 1 10 100

Subj

ect

7

Autoimmunity 2014

Page 10: Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications

Autoimmunity 2014

Page 11: Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications

Fc-specific nTreg circulate in healthy donors but not adult KD patients

Page 12: Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications

Hypothesis for the lack of Fc-specific nTreg

• Clonal deletion (mutated maternal Fc?)• Clonal anergy• HLA type/HLA binding affinity of the relevant Fc

peptides• Antigen processing

Page 13: Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications

The T cell receptor (TCR) recognizes a complex represented by MHC molecules and a peptide bound to the MHC binding groove

Page 14: Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications

Antigen Processing and Presentation to MHC class II-restricted T Cells (CD4+): the data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications

Page 15: Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications

Fine specificity of nTreg: 64 peptides 15 amino acid long, 10 amino acid overlap

Page 16: Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications

Method to define nTreg specificity

PBMC separation

Culture 4 days PBMC with 20µg/ml Fc peptide (97% pure) without exogenous IL-2

Read outs:1. IL-10 measured in culture supernatants2. CD4+ CD25 high T cell expansion by flow cytometry

Page 17: Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications

Study population – KD subjects after IVIG

Page 18: Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications

5 6 8

IL10 responses to 6 immunodominant Fc peptides recognized by nTreg in KD subjects after IVIG

Fc 51-65(Rank 1, 4/8, 50%)

Fc 181-195 (Rank 2, 3/8, 37.5%)

Fc 61-75 (Rank 2, 3/8, 37.5%)

Fc 21-35 (Rank 3, 2/8, 25%)

Fc 271-285 (Rank 3, 2/8, 25%)

Fc 306-320 (Rank 3, 2/8, 25%)

5 6 8

5 6 8

5 6 8

5 6 8

5 6 8

Page 19: Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications

Fc position Sequence21-35 TAALGCLVKDYFPEP

26-40 CLVKDYFPEPVTVSW

31-45 YFPEPVTVSWNSGAL

36-50 VTVSWNSGALTSGVH

51-65 TFPAVLQSSGLYSLS

56-70 LQSSGLYSLSSVVTV

61-75 LYSLSSVVTVPSSSL

66-80 SVVTVPSSSLGTQTY

121-135 SVFLF PPKPKDTLMI

126-140 PPKPKDTLMISRTPE

181-195 TYRVVSVLTVLHQDW

186-200 SVLTVLHQDWLNGKE

271-285 NNYKTTPPVLDSDGS

276-290 TPPVLDSDGSFFLYS

301-315 QGNVFSCSVMHEALH

306-320 SCSVMHEALHNHYTQAutoimmunity 2015

Page 20: Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications

Study population – healthy adult donors

Page 21: Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications

Fc 306-320 (Rank 1, 18/36, 50.0%)

Fc 181-195 (Rank 2, 16/36, 44.4%)

Fc 271-285 (Rank 3, 15/36, 41.7%)

Fc 21-35 (Rank 4, 14/36, 38.9%)

Fc 61-75 (Rank 7, 11/36, 30.6%)

Fc 51-65 (Rank 9, 9/36, 25%)

IL10 responses to 6 immunodominant Fc peptides recognized by nTreg in healthy adult donors

Page 22: Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications

DR alleles DQ alleles DP alleles

No binding

Fc 181-195

No binding

Fc 61-75

Fc 51-65

HLA bindingFc 306-320

Fc 21-35

Fc 271-285

Binding affinity of 6 immunodominant Fc peptides to different DR, DQ and DP alleles of MHC class II

Page 23: Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications

Study population – RA subjects

Page 24: Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications

Fc 181-195 (Rank 1, 6/14, 42.9%)

Fc 21-35 (Rank 2, 5/14, 35.7%)

Fc 306-320 (Rank 2, 5/14, 35.7%)

Fc 61-75 (Rank 3, 3/14, 21.4%)

Fc 51-65 (Rank 3, 3/14, 21.4%)

Fc 271-285 (Rank 4, 2/14, 14.3%)

IL10 responses to 6 immunodominant Fc peptides recognized by nTreg in RA subjects

Page 25: Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications

Promiscuous HLA class II binder Fc 181-195 Promiscuous HLA class II binder Fc 61-75 Promiscuous HLA class II binder Fc 51-65

Fc 21-35 (binds DRB1*12:01) Fc 306-320 (binds DQB1*06:02) Fc 271-285 (binds DRB1*07:01 and DRB1*04:05 )

Page 26: Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications

21-35 61-75 181-195 306-320

nTreg expansion in response to peptide stimulation

Healthyadult

donors

RA subjects In progress

Page 27: Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications

Culture supernatant of a Fc 21-35 specific nTreg line down-regulate IFNγ secretion by autologous pro-inflammatory T cells

Page 28: Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications

P = 0.0013, Mann-Whitney test

nTreg responses to the Fc are different in healthy donors and RA patients

Page 29: Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications

The phenotype of Fc-specific Treg clones indicate that these T cells are natural Treg(nTreg)

CD4

CD

25

CCR7CCR6IL-15rIL-7r CD45RAFOXP3 CCR4

Treg clonesIL-10 IL-4 TGFβCTLA-4

Treg clonesIL-17GITR PDCD1

Page 30: Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications

Treg expansion IL-10

IL-4B cell expansion?

TCR

Treg

HLAClass II

IgG+ B cells and their role in expanding Fc-specific nTreg

A new model of B cell-T cell cooperation?

Page 31: Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications

Fc-specific nTreg recognize autologous IgG+ B cells

Page 32: Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications

Treg clones

IL-4

pg/

ml

Live autologous IgG+ B cells

Fixed autologous IgG+ B cellsIL

-10

pg/m

l

Treg clones

Live autologous IgG+ B cells

Fixed autologous IgG+ B cells

IgG molecules on B cells need to be processed and presented by HLA molecules to stimulate Fc-specific Treg clones

live versus fixed IgG+ autologous B cells as antigen presenting cells

Page 33: Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications

Anti-CD4102 103 104 105

102

103

104

105

Ant

i-CD

25 71.7

Anti-CXCR5102 103 104 105

42.3

Even

ts

Anti-CCR7

Even

ts

52.9

102 103 104 105

Chemokine receptors suggest homing to the lymph nodes and proximity to the germinal center: representative Fc 181-195 specific Treg line

Page 34: Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications
Page 35: Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications

Conclusions

We identified the fine specificity of an important nTreg lineage involved in immune homeostasis in health and diseases: 3-5 immunodominant Fc peptides could serve in the clinic as the first approach to induce immune regulation

CCR7 expression and B cell antigen presentation suggest that Fc-specific nTreg operates in the lymph nodes

IgG+ B cells can activate Fc-specific nTreg that reside in the germinal centers (CXCR5+)

Fc-specific nTreg secrete IL-4 in addition to IL-10 and promotes B cell survival/expansion

This is the main mechanism of IVIG in some clinical settings: Fc peptides by-pass the need for antigen processing that is affected in the two disease models studied (KD and RA): Fc peptides offer an optimized approach to expand Fc-specific nTreg in vivo

Page 36: Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications

Application of the technology

Autoimmunity

Vascular inflammation

Prevention of miscarriages in autoimmune women

Neurological disorders successfully treated with IVIG

Kawasaki disease and other diseases where the IVIG mechanism resides in Immune regulation

Page 37: Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications
Page 38: Immunodominant peptides derived from the heavy constant ... · data suggest that relevant Fc peptides are not presented to nTreg in KD patients that develop arterial complications

Acknowledgments

Li-En HisiehNegar BenhamfarRanim Touma

Gary FiresteinDavid BoyleAndre Matti

Jane C BurnsAdriana H TremouletChisato ShimizuJoan PancheriDeeAnna Sherrer

UCSD School of MedicineDepartment of Medicine RAI division

UCSD School of MedicineDepartment of Pediatrics AIR Division

La Jolla Institute for Allergy and Immunology

Alessandro SetteJohn Sidney

Kawasaki Disease Center