I C CAregular scientific meetings, workshops and publications of The Journal of Antibiotics (the official journal, joint publication with Japan Antibiotics Research Association), Actinomycetologica

CTINOMYCETO

LOG

IC

2020 VO

L. 34 N

O. 1

ACTIN

OMYC

ETOLO

GIC

A

VOL. 34 NO. 1

1990年12月18日第４種郵便物認可 ISSN 0914-5818

http://www. actino.jp/Published byThe Society for Actinomycetes Japan

日本放線菌学会誌第28 巻1 号ACTINOMYCETOLOGICA VOL.28 NO.1, 2014

誌会学菌線放本日

A B C D

(

2020

公開

S1

SAJ NEWS

Vol. 34, No. 1, 2020

Contents

• Outline of SAJ: Activities and Membership S2

• List of New Scientific Names and Nomenclatural Changes in the Phylum

Actinobacteria Validly Published in 2019 S3

• Cancelation of the 2020 Annual Meeting of the Society for Actinomycetes

Japan

S54

• Online access to The Journal of Antibiotics for SAJ members S55

S2

Outline of SAJ: Activities and Membership

The Society for Actinomycetes Japan

(SAJ) was established in 1955 and authorized as

a scientific organization by Science Council of

Japan in 1985. The Society for Applied Genetics

of Actinomycetes, which was established in

1972, merged in SAJ in 1990. SAJ aims at

promoting actinomycete researches as well as

social and scientific exchanges between

members domestically and internationally. The

Activities of SAJ have included annual and

regular scientific meetings, workshops and

publications of The Journal of Antibiotics (the

official journal, joint publication with Japan

Antibiotics Research Association),

Actinomycetologica (Newsletter) and laboratory

manuals. Contributions to International

Streptomyces Project (ISP) and International

Symposium on Biology of Actinomycetes

(ISBA) have also been SAJ's activities. In

addition, SAJ have occasional special projects

such as the publication of books related to

actinomycetes: “Atlas of Actinomycetes,

1997”,“Identification Manual of Actinomycetes,

2001” and “Digital Atlas of Actinomycetes,

2002” (http://atlas.actino.jp/). These activities

have been planned and organized by the board

of directors with association of executive

committees consisting of active members who

belong to academic and nonacademic

organizations.

The SAJ Memberships comprise active

members, student members, supporting

members and honorary members. Currently

(as of June, 2020), SAJ has 554 active members

including 219 student members, 35 oversea

members, 8 honorary members, 1 oversea

honorary members, and 12 supporting members.

The SAJ members are allowed to join the

scientific and social meetings or projects

(regular and specific) of SAJ on a membership

basis and to browse The Journal of Antibiotics

from a link on the SAJ website and will receive

each issue of Actinomycetologica, currently

published in June and December. Actinomycete

researchers in foreign countries are welcome to

join SAJ. For application of SAJ membership,

please contact the SAJ secretariat (see below).

Annual membership fees are currently 5,000 yen

for active members, 3,000 yen for student

members and 20,000 yen or more for supporting

members (mainly companies), provided that the

fees may be changed without advance

announcement.

The current members (April 2020 - March

2022) of the Board of Directors are: Tohru Dairi

(Chairperson; Hokkaido Univ.), Yasuo Ohnishi

(Vice Chairperson; Univ. of Tokyo), Hisayuki

Komaki (Secretary General; NITE), Susumu

Iwamoto (Kyowa Kirin Co., Ltd.), Kaoru

Okayama (MicroBiopharm Japan Co., Ltd.),

Miyuki Otsuka (Tamagawa Univ.), Shigeru

Kitani (Osaka Univ.), Mamoru Komatsu

(Kitasato Univ.), Hideaki Takano (Nihon Univ.),

Shunji Takahashi (RIKEN), Takeshi Hosaka

(Shinshu Univ.), Yasutaka Hoshino (NIID),

Hideyuki Muramatsu (BIKAKEN), Chitose

Maruyama (Fukui Pref. Univ.), Michihiko

Kobayashi (Tsukuba Univ.) and Masahiro

Natsume (Tokyo Univ. of Agr. & Tech.).

The members of the Advisory Board are:

Fumio Kato, Yoko Takahashi, Ken-ichiro Suzuki,

Masayuki Hayakawa and Taichi Manome.

Copyright: The copyright of the articles

published in Actinomycetologica is transferred

from the authors to the publisher, The Society

for Actinomycetes Japan, upon acceptance of the

manuscript.

The SAJ Secretariat

c/o Institute of Microbial Chemistry

(BIKAKEN), 3-14-23 Kamiosaki, Shinagawa,

Tokyo 141-0021, JAPAN

Phone: +81-3-6455-7169

Fax: +81-3-3441-7589

E-mail: [email protected]

S3

List of new scientific names and nomenclatural changes

in the phylum Actinobacteria validly published in 2019

Abbreviations

IJSEM, International Journal of Systematic and

Evolutionary Microbiology

LCTO, List of changes in taxonomic opinion

VL, Validation List

Ref., Refrerence

References of ‘List of changes in taxonomic opinion

(LCTO)’ and ‘Validation List (VL)’ are shown as

follows.

LCTO no. 29, [IJSEM, 2019, 69: 13–32.]

LCTO no. 30, [IJSEM, 2019, 69: 1850–1851.]

VL no. 185, [IJSEM, 2019, 69: 5–9.]

VL no. 186, [IJSEM, 2019, 69: 597–599.]

VL no. 187, [IJSEM, 2019, 69: 1247–1250.]

VL no. 188, [IJSEM, 2019, 69: 1844–1846.]

VL no. 189, [IJSEM, 2019, 69: 2627–2629.]

NEW FAMILY

Baekduiaceae An et al. 2019, fam. nov.

Type genus: Baekduia An et al. 2019.

Ref.: J Microbiol., 2018, 56: 24–29; VL no. 187.

A member of the order Baekduiaceae.

NEW GENUS

Allorhizocola Sun et al. 2019, gen. nov.

Type species: Allorhizocola rhizosphaerae Sun et al. 2019.

Ref.: IJSEM, 2019, 69: 109–115.

A member of the family Micromonosporaceae.

Antribacter Zhang et al. 2019, gen. nov.

Type species: Antribacter gilvus Zhang et al. 2019.

Ref.: IJSEM, 2019, 69: 3792–3799.

A member of the family Promicromonosporaceae.

Baekduia An et al. 2019, gen. nov.

Type species: Baekduia soli An et al. 2019.

Ref.: J Microbiol., 2018, 56: 24-2; VL no. 187.

A member of the family Rubrobacterales.

Bailinhaonella Feng et al. 2019, gen. nov.

Type species: Bailinhaonella thermotolerans Feng et al.

2019.

Ref.: IJSEM, 2019, 69: 1903–1909.

A member of the family Streptosporangiaceae.

Desertactinospora corrig. Saygin et al. 2019, gen. nov.

Type species: Desertactinospora gelatinilytica corrig.

Saygin et al. 2019.

Ref.: Antonie Van Leeuwenhoek, 2019, 112: 409-423;

VL no. 187.


Desertihabitans Sun et al. 2019, gen. nov.

Type species: Desertihabitans aurantiacus Sun et al. 2019.

Ref.: IJSEM, 2019, 69: 2486–2491.


Allorhizocola Sun et al. 2019, gen. nov.

Type species: Allorhizocola rhizosphaerae Sun et al.

2019.

Ref.: IJSEM, 2019, 69: 109–115.

A member of the family Propionibacteriaceae.

Fudania Zhu et al. 2019, gen. nov.

Type species: Fudania jinshanensis Zhu et al. 2019.

Ref.: IJSEM, 2019, 69: 2942–2947.

A member of the family Actinomycetaceae.

Galactobacter Hahne et al. 2019, gen. nov.

Type species: Galactobacter caseinivorans Hahne et al.

2019.

Ref.: IJSEM, 2019, 69: 2862–2869.

A member of the family Micrococcaceae.

Gandjariella Ningsih et al. 2019, gen. nov.

Type species: Gandjariella thermophila Ningsih et al. 2019.

Ref.: IJSEM, 2019, 69: 3080–3086.

A member of the family Pseudonocardiaceae.

S4

Litorihabitans Hamada et al. 2019, gen. nov.

Type species: Litorihabitans aurantiacus Hamada et al.

2019.

Ref.: IJSEM, 2019, 69: 1202–1206.

A member of the family Beutenbergiaceae.

Marinitenerispora Ng et al. 2019, gen. nov.

Type species: Marinitenerispora sediminis Ng et al.

2019.

Ref.: IJSEM, 2019, 69: 3031–3040.

A member of the family Nocardiopsaceae.

Planctomonas Liu et al. 2019, gen. nov.

Type species: Planctomonas deserti Liu et al. 2019.

Ref.: IJSEM, 2019, 69: 616–624.

A member of the family Microbacteriaceae.

Protaetiibacter Heo et al. 2019, gen. nov.

Type species: Protaetiibacter intestinalis Heo et al. 2019.

Ref.: IJSEM, 2019, 69: 2101–2107.


Pseudolysinimonas Heo et al. 2019, gen. nov.

Type species: Pseudolysinimonas kribbensis (Dastager

et al. 2009) Heo et al. 2019.

Ref.: IJSEM, 2019, 69: 2101–2107.


Specibacter Lee and Schumann 2019, gen. nov.

Type species: Specibacter cremeus Lee and Schumann

2019.

Ref.: IJSEM, 2019, 69: 1767–1774.


Spongiactinospora Li et al. 2019, gen. nov.

Type species: Spongiactinospora rosea Li et al. 2019.

Ref.: IJSEM, 2019, 69: 427–433.


NEW SPECIES

Actinomadura craniellae Li et al. 2019, sp. nov.

Type strain: LHW63021 = DSM 106125 = CCTCC AA

2018015.

Ref.: IJSEM, 2019, 69: 1207–1212.

Actinomadura hankyongensis corrig. Siddiqi et al. 2019, sp. nov.

Type strain: Gsoil 556 = KACC 19438 = LMG 30327.

Ref.: Curr Microbiol., 2018, 75: 1401–1407; VL no.

187.

Actinomadura logoneensis Shi et al. 2019, sp. nov.

Type strain: NEAU-G17 = CGMCC 4.7411 = DSM

105122.

Ref.: IJSEM, 2019, 69: 2914–2920.

Actinomadura roseirufa Wieme et al. 2019, sp. nov.

Type strain: LMG 30035 = CECT 9808 = ATCC 53664.

Ref.: IJSEM, 2019, 69: 3068–3073.

Actinomyces lilanjuaniae Li et al. 2019, sp. nov.

Type strain: 2129 = CGMCC 4.7483 = DSM 106426.

Ref.: IJSEM, 2019, 69: 3485–3491.

Actinomycetospora callitridis Kaewkla and Franco

2019, sp. nov.

Type strain: CAP 335 = DSM 101857 = NRRL B-

65350.

Ref.: Antonie Van Leeuwenhoek, 2019, 112: 331–337; VL no. 188

Actinoplanes deserti Habib et al. 2019, sp. nov.

Type strain: YIM CF22 = CCTCC AB 2018113 =

KCTC 39543.

Ref.: Syst Appl Microbiol., 2018, 41: 2303–2310; VL

no. 186

Aeromicrobium lacus Sun et al. 2019, sp. nov.

Type strain: CPCC 204604 = NBRC 112936 = DSM

105424.

Ref.: IJSEM, 2019, 69: 460–464.

Aeromicrobium panacisoli Siddiqi et al. 2019, sp. nov.

Type strain: Gsoil 137 = DSM 17940 = KCTC 191305.

Ref.: Curr Microbiol., 2018, 75: 624–629; VL no. 187.

Agromyces mangrove Hamada et al. 2019, sp. nov.

Type strain: HIr16-25 = NBRC 112812 = TBRC 7760.

Ref.: Arch Microbiol., 2018, 200: 939–943; VL no. 188.

Agromyces tardus Sun et al. 2019, sp. nov.

Type strain: SJ-23 = CGMCC 4.7419 = DSM 105049.

Ref.: IJSEM, 2019, 69: 3268–3275.

Allorhizocola rhizosphaerae Sun et al. 2019, sp. nov.

Type strain: CPCC 204380 = DSM 102292 = KCTC

39746.

Ref.: IJSEM, 2019, 69: 109–115.

Alloscardovia theropitheci Modesto et al. 2019, sp.

S5

nov.

Type strain: GLDI4/2 = DSM 106019 = JCM 32430.

Ref.: IJSEM, 2019, 69: 3041–3048.

Amnibacterium flavum Tuo et al. 2019, sp. nov.

Type strain: M8JJ-5 = KCTC 49089 = CGMCC

1.16390.

Ref.: IJSEM, 2019, 69: 285–290.

Amycolatopsis cappadoca Işik et al. 2019, sp. nov.

Type strain: AG28 = DSM 104280 = KCTC 39884.

Ref.: Antonie Van Leeuwenhoek, 2018, 111: 1175–

1182; VL no. 185.

Amycolatopsis eburnean Chaiya et al. 2019, sp. nov.

Type strain: GLM-1 = TBRC 9315 = NBRC 113658.

Ref.: IJSEM, 2019, 69: 3603–3608.

Amycolatopsis panacis Peng et al. 2019, sp. nov.

Type strain: YIM PH21725 = CCTCC AA 2017044 =

KCTC 49031 = DSM 105902.

Ref.: IJSEM, 2019, 69: 567–571.

Amycolatopsis suaedae Chantavorakit et al. 2019, sp.

nov.

Type strain: 8-3EHSu = TBRC 8488 = NBRC 113449.

Ref.: IJSEM, 2019, 69: 2591–2596.

Amycolatopsis vastitatis Idris et al. 2019, sp. nov.

Type strain: H5 = NCIMB 14970 = NRRL B-65279.


1533; VL no. 185.

Antribacter gilvus Zhang et al. 2019, sp. nov.

Type strain: CFH 30434 = CGMCC 1.13856 = KCTC

49093.

Ref.: IJSEM, 2019, 69: 3792–3799.

Arthrobacter celericrescens Yan et al. 2019, sp. nov.

Type strain: NEAU-SA2 = DSM 106718 = CCTCC AB

2017272.

Ref.: IJSEM, 2019, 69: 3093–3099.

Arthrobacter glacialis Liu et al. 2019, sp. nov.

Type strain: HLT2-12-2 = CGMCC 1.10025 = NBRC

113092.

Ref.: Syst Appl Microbiol., 2019, 42: 168–177; VL no.

188.

Baekduia soli An et al. 2019, sp. nov.

Type strain: BR7-21 = KCTC 22257 = LMG 24797.


Bailinhaonella thermotolerans Feng et al. 2019, sp.

nov.

Type strain: YIM 75507 = KCTC 49229 = CGMCC

4.7547.

Ref.: IJSEM, 2019, 69: 1903–1909.

Bifidobacterium aemilianum Alberoni et al. 2019, sp.

nov.

Type strain: XV10 = DSM 104956 = LMG 30143.


188.

Bifidobacterium avesanii Michelini et al. 2019, sp.

nov.

Type strain: TRE-C = DSM 100685 = JCM 30943.

Ref.: Syst Appl Microbiol., 2018, 41: 528; VL no. 185.

Bifidobacterium callimiconis Duranti et al. 2019, sp.

nov.

Type strain: 2028B = LMG 30938 = CCUG 72814.

Ref.: IJSEM, 2019, 69: 1288–1298.

Bifidobacterium castoris Duranti et al. 2019, sp. nov.


Ref.: IJSEM, 2019, 69: 1288–1298.

Bifidobacterium dolichotidis Duranti et al. 2019, sp.

nov.


Ref.: IJSEM, 2019, 69: 1288–1298.

Bifidobacterium goeldii Duranti et al. 2019, sp. nov.


Ref.: IJSEM, 2019, 69: 1288–1298.

Bifidobacterium jacchi Modesto et al. 2019, sp. nov.

Type strain: MRM 9.3 = DSM 103362 = JCM 31788.

Ref.: IJSEM, 2019, 69: 2477–2485.

Bifidobacterium samirii Duranti et al. 2019, sp. nov.


Ref.: IJSEM, 2019, 69: 1288–1298.

Bifidobacterium xylocopae Alberoni et al. 2019, sp.

nov.

Type strain: XV2 = DSM 104955 = LMG 30142.


188.

Blastococcus deserti Yang et al. 2019, sp. nov.

Type strain: SYSU D8006 = CGMCC 1.15935 = CPCC

204618 = KCTC 49026.

Ref.: Arch Microbiol., 2019, 201: 193–198; VL no. 187.

Brevibacterium anseongense Jung et al. 2019, sp. nov.

S6



Cellulomonas algicola Yamamura et al. 2019, sp. nov.

Type strain: TKZ-21 = NBRC 112905 = TBRC 8129.

Ref.: IJSEM, 2019, 69: 2723–2728.

Cellulomonas rhizosphaerae Tian et al. 2019, sp. nov.

Type strain: NEAU-TCZ24 = CCTCC AA 2018042 =

JCM 32383.

Ref.: IJSEM, 2019, 69: 1001–1008.

Collinsella vaginalis Diop et al. 2019, sp. nov.

Type strain: Marseille-P2666 = CSUR 2666 =

DSM103342.

Ref.: IJSEM, 2019, 69: 949–956.

Corynebacterium alimapuense Claverías et al. 2019,

sp. nov.

Type strain: VA37-3 = CCUG 69366 = NCIMB 15118.

Ref.: IJSEM, 2019, 69: 783–790.

Corynebacterium choanae Busse et al. 2019, sp. nov.

Type strain: 200CH = LMG 30628 = CCM 8831.

Ref.: IJSEM, 2019, 69: 2928–2935.

Corynebacterium gerontici Busse et al. 2019, sp. nov.

Type strain: W8 = LMG 30629 = CCM 8833.

Ref.: IJSEM, 2019, 69: 2928–2935.

Corynebacterium pseudopelargi Busse et al. 2019, sp.

nov.

Type strain: 812CH = LMG 30627 = CCM 8832.

Ref.: IJSEM, 2019, 69: 2928–2935.

Cryobacterium melibiosiphilum Liu et al. 2019, sp.

nov.

Type strain: Hh39 = NBRC 107884 = CGMCC

1.11212.

Ref.: IJSEM, 2019, 69: 3276–3280.

Cryobacterium zongtaii Liu et al. 2019, sp. nov.

Type strain: TMN-42 = CGMCC 1.9695 = NBRC

111591.


188.

Desertactinospora gelatinilytica corrig. Sayginet al. 2019, sp. nov.

Type strain: 7K107 = DSM 107423 = JCM 32585 =

KCTC 49108.

Ref.: Antonie Van Leeuwenhoek, 2019, 112: 409–423;

VL no. 187.

Desertihabitans aurantiacus Sun et al. 2019, sp. nov.

Type strain: CPCC 204711 = KCTC 39977 = DSM

105431.

Ref.: IJSEM, 2019, 69: 2486–2491.

Frankia torreyi Nouioui et al. 2019, sp. nov.

Type strain: CpI1 = CECT 9035 = DSM 44263.

Ref.: Antonie Van Leeuwenhoek, 2019, 112: 57–65; VL

no. 188.

Fudania jinshanensis Zhu et al. 2019, sp. nov.


Ref.: IJSEM, 2019, 69: 2942–2947.

Galactobacter caseinivorans Hahne et al. 2019, sp.

nov.

Type strain: JZ R-183 = DSM 107700 = LMG 30902.

Ref.: IJSEM, 2019, 69: 2862–2869.

Galactobacter valiniphilus Hahne et al. 2019, sp. nov.

Type strain: JZ R-35 = DSM 107699 = LMG 30901.

Ref.: IJSEM, 2019, 69: 2862–2869.

Gandjariella thermophila Ningsih et al. 2019, sp. nov.

Type strain: SL3-2-4 = UICC B-83 = NRRL B-67478

= InaCC A981.

Ref.: IJSEM, 2019, 69: 3080–3086.

Gardnerella leopoldii Vaneechoutte et al. 2019, sp. nov.

Type strain: UGent 06.41 = LMG 30814 = CCUG

72425.

Ref.: IJSEM, 2019, 69: 679–687.

Gardnerella piotii Vaneechoutte et al. 2019, sp. nov.

Type strain: UGent 18.01 = LMG 30818 = CCUG

72427.

Ref.: IJSEM, 2019, 69: 679–687.

Gardnerella swidsinskii Vaneechoutte et al. 2019, sp.

nov.

Type strain: GS 9838-1 = LMG 30812 = CCUG 72429.

Ref.: IJSEM, 2019, 69: 679–687.

Geodermatophilus marinus Li et al. 2019, sp. nov.


2018014.

Ref.: IJSEM, 2019, 69: 2966–2971.

Georgenia alba Li et al. 2019, sp. nov.

Type strain: SYSU D8008 = CGMCC 1.1580 = KCTC

39988.


VL no. 187.

S7

Glaciihabitans arcticus Dahal and Kim 2019, sp. nov.

Type strain: RP-3-7 = KEMB 9005-731 = KACC

21151 = NBRC 113769.

Ref.: IJSEM, 2019, 69: 2492–2497.

Gordonia oryzae Muangham et al. 2019, sp. nov.

Type strain: RS15-1S = TBRC 8485 = NBRC 113446.

Ref.: IJSEM, 2019, 69: 1621–1627.

Gordonia sediminis Sangkanu et al. 2019, sp. nov.

Type strain: AMA 120 = TBRC 7109 = NBRC 113236.

Ref.: IJSEM, 2019, 69: 1814–1820.

Haloactinobacterium glacieicola Wang et al. 2019, sp.

nov.

Type strain: T3246-1 = CGMCC 1.13535 = JCM

32923.

Ref.: IJSEM, 2019, 69: 3519–3523.

Jiangella anatolica Ay et al. 2019, sp. nov.

Type strain: GTF31 = CECT 9378 = DSM 100984.

Ref.: Curr Microbiol., 2019, 76: 52–56; VL no. 189.

Jiangella endophytica Niemhom et al. 2019, sp. nov.

Type strain: KE2-3 = BCC 66359 = NBRC 110004.

Ref.: IJSEM, 2019, 69: 454–459.

Jiangella rhizosphaerae Han et al. 2019, sp. nov.

Type strain: NEAU-YY265 = JCM 32551 = CGMCC

4.7475.

Ref.: IJSEM, 2019, 69: 1320–1326.

Kocuria soli Tuo et al. 2019, sp. nov.

Type strain: M5W7-7 = KCTC 49195 = CGMCC

1.13744.

Ref.: IJSEM, 2019, 69: 2064–2068.

Kocuria tytonis Braun et al. 2019, sp. nov.

Type strain: 442 = DSM 104130 = LMG 29944.

Ref.: IJSEM, 2019, 69: 447–451.

Kribbella jiaozuonensis Zhao et al. 2019, sp. nov.

Type strain: NEAU-THZ27 = CGMCC 4.7504 = DSM

105535.

Ref.: IJSEM, 2019, 69: 3500–3507.

Kribbella turkmenica Saygin et al. 2019, sp. nov.

Type strain: 16K104 = JCM 32914 = KCTC 49224.

Ref.: IJSEM, 2019, 69: 2533–2540.

Leucobacter muris Benga et al. 2019, sp. nov.

Type strain: 924/12 = DSM 101948 = CCM 8761.

Ref.: IJSEM, 2019, 69: 2095–2100.

Litorihabitans aurantiacus Hamada et al. 2019, sp.

nov.

Type strain: HIsM16-52 = NBRC 112290 = TBRC

7759.

Ref.: IJSEM, 2019, 69: 1202–1206.

Marinitenerispora sediminis Ng et al. 2019, sp. nov.

Type strain: TPS16 = DSM 46825 = TBRC 5138.

Ref.: IJSEM, 2019, 69: 3031–3040.

Marmoricola mangrovicus Li et al. 2019, sp. nov.

Type strain: 4Q3S-7 = KCTC 39790 = CGMCC 4.7424.

Ref.: IJSEM, 2019, 69: 1343–1349.

Microbacterium bovistercoris Ling et al. 2019, sp. nov.

Type strain: NEAU-LLE = CCTCC AA 2018025 =

JCM 32662.

Ref.: IJSEM, 2019, 69: 2703–2708.

Microbacterium suaedae Zhu et al. 2019, sp. nov.

Type strain: YZYP 306 = CGMCC 1.16261 = KCTC

49101.

Ref.: IJSEM, 2018, 69: 411–416.

Microbacterium ureisolvens Cheng et al. 2019, sp. nov.

Type strain: CFH S00084 = KCTC 39802 = DSM

103157.

Ref.: IJSEM, 2019, 69: 560–566.

Micromonospora acroterricola Carro et al. 2019, sp.

nov.

Type strain: 5R2A7 = LMG 30755 = CECT 9656.

Ref.: IJSEM, 2019, 69: 3426–3436.

Micromonospora arida Carro et al. 2019, sp. nov.

Type strain: LB32 = CECT 9662 = LMG 30765.

Ref.: Sci Rep., 2019, 9: 4678; VL no. 188.

Micromonospora azadirachtae Kuncharoen et al.

2019, sp. nov.

Type strain: AZ1-19 = KCTC 39941 = NBRC 112784

= TISTR 255915.


VL no. 187.

Micromonospora caldifontis Thawai et al. 2019, sp.

nov.

Type strain: HSS6-8 = TBRC 8927 = JCM 17126.

Ref.: IJSEM, 2019, 69: 1336–1342.

Micromonospora craniellae Li et al. 2019, sp. nov.


2018012. Ref.: IJSEM, 2019, 69: 715–720.

S8

Micromonospora globispora Carro et al. 2019, sp. nov.

Type strain: S2901 = DSM 45936 = KCTC 29212.


188.

Micromonospora inaquosa Carro et al. 2019, sp. nov.

Type strain: LB39 = CECT 9663 = LMG 30766.

Ref.: Sci Rep., 2019, 9: 4678; VL no. 188.

Micromonospora radices Kuncharoen et al. 2019, sp.

nov.

Type strain: AZ1-13 = KCTC 39786 = NBRC 112324

= JCM 32147 = TISTR 2404.

Ref.: IJSEM, 2019, 69: 2884–2891.

Modestobacter italicus Montero-Calasanz et al. 2019,

sp. nov.

Type strain: BC 501 = DSM 44449 = CECT 9708.

Ref.: IJSEM, 2019, 69: 1537–1545.

Mycetocola zhujimingii Li et al. 2019, sp. nov.


Ref.: IJSEM, 2019, 69: 1117–1122.

Mycobacterium attenuatum Tagini et al. 2019, sp. nov.

Type strain: MK41 = CCUG 72127 = DSM 107153.

Ref.: IJSEM, 2019, 69: 1696–1704.

Mycobacterium basiliense Seth-Smithet al. 2019, sp.

nov.

Type strain: 901379 = CIP 111488 = CCOS 1136 =

DSM 104308.

Ref.: Front Microbiol., 2018, 9: 3184; VL no. 187.

Mycobacterium innocens Tagini et al. 2019, sp. nov.

Type strain: MK13 = CCUG 72126 = DSM 107161.

Ref.: IJSEM, 2019, 69: 1696–1704.

Mycobacterium neglectum Nouioui et al. 2019, sp.

nov.

Type strain: BN 3150 = CECT 8778 = DSM 44756.


1223; VL no. 188.

Mycobacterium palauense Nouioui et al. 2019, sp. nov.

Type strain: CECT 8779 = DSM 44914.


VL no. 188.

Mycobacterium pseudokansasii Tagini et al. 2019, sp.

nov.

Type strain: MK142 = CCUG 72128 = DSM 107152. Ref.: IJSEM, 2019, 69: 1696–1704.

Mycolicibacterium stellerae Nouioui et al. 2019, sp.

nov.

Type strain: I10A-01893 = CECT 8783 = KCTC 19843

= DSM 45590.

Ref.: IJSEM, 2019, 69: 3465–3471.

Nakamurella antarctica Da et al. 2019, sp. nov.

Type strain: S14-144 = CCTCC AB 2015345 = KCTC

39796.

Ref.: IJSEM, 2019, 69: 3710–3715.

Nakamurella deserti Liu et al. 2019, sp. nov.

Type strain: 12Sc4-1 = KCTC 49114 = CGMCC

1.16555.

Ref.: IJSEM, 2019, 69: 214–219.

Nesterenkonia natronophila Machin et al. 2019, sp.

nov.

Type strain: M8 = JCM 32100 = CGMCC 1.16706 =

MCC 3367.

Ref.: IJSEM, 2019, 69: 1960–1966.

Nocardia aurea Fang et al. 2019, sp. nov.

Type strain: SYSU K10002 = KCTC 39849 = DSM

103986.

Ref.: IJSEM, 2019, 69: 159–164.

Nocardia mangyaensis Yang et al. 2019, sp. nov.

Type strain: Y48 = JCM 32795 = CGMCC 4.7494.

Ref.: IJSEM, 2019, 69: 397–403.

Nocardia yunnanensis Zhang et al. 2019, sp. nov.

Type strain: CFH S0054 = DSM 46763 = JCM 30082.

Ref.: IJSEM, 2019, 69: 3116–3120.

Nocardia zhihengii Huang et al. 2019, sp. nov.

Type strain: YIM TG2190 = DSM 100515 = KCTC

39596.


2156; VL no. 186.

Nocardioides ferulae Li et al. 2019, sp. nov.

Type strain: SZ4R5S7 = CGMCC 4.7456 = KCTC

39994.

Ref.: IJSEM, 2019, 69: 1253–1258.

Nocardioides gansuensis Wu et al. 2019, sp. nov.

Type strain: WSJ-1 = KCTC 49117 = CCTCC AB

2018027.

Ref.: IJSEM, 2019, 69: 390–396.

Nocardioides panaciterrulae Kim et al. 2019, sp. nov. Type strain: Gsoil 958 = DSM 21350 = KACC 14271

S9

= KCTC 19471.

Ref.: Antonie Van Leeuwenhoek, 2013;103: 1385–

1393; VL no. 187.

Nocardioides silvaticus Li et al. 2019, sp. nov.

Type strain: S-34 = KCTC 49137 = CCTCC AB

2018079.

Ref.: IJSEM, 2019, 69: 68–73.

Nocardioides speluncae Fang et al. 2019, sp. nov.

Type strain: YIM ART13 = DSM 100493 = KCTC

39593.


VL no. 189.

Nocardioides yefusunii Huang et al. 2019, sp. nov.

Type strain: HY056 = CGMCC 4.7563 = JCM 33399.

Ref.: IJSEM, 2019, 69: 3629–3635.

Nocardioides zhouii Zhang et al. 2019, sp. nov.

Type strain: HLT2-9 = CGMCC 1.11084 = NBRC

109783.

Ref.: IJSEM, 2019, 69: 2329–2334.

Nonomuraea insulae Saricaoglu et al. 2019, sp. nov.

Type strain: H2R21 = CGMCC 4.7338 = DSM 102915

= KCTC 39769.

Ref.: Antonie Van Leeuwenhoek, 2018, 111: 2051-

2059; VL no. 186.

Nonomuraea lactucae Cao et al. 2019, sp. nov.

Type strain: NEAU-YG30 = JCM 32549 = CGMCC

4.7506.

Ref.: IJSEM, 2019, 69: 316–321.

Olsenella faecalis Han et al. 2019, sp. nov.

Type strain: KGMB04489 = KCTC 15699 = CCUG

72345.

Ref.: IJSEM, 2019, 69: 2323–2328.

Ornithinimicrobium cavernae Zhang et al. 2019, sp.

nov.

Type strain: CFH 30183 = CGMCC 1.16393 = KCTC

49018.


VL no. 187.

Phytoactinopolyspora halophila Ding et al. 2019, sp.

nov.

Type strain: YIM 96934 = KCTC 39926 = CCTCC AB

2017057.

Ref.: IJSEM, 2019, 69: 384–389.

Phytoactinopolyspora halotolerans Ji et al. 2019, sp.

nov.

Type strain: YIM 96448 = CCTCC AB 2017055 =

KCTC 39924.

Ref.: Antonie Van Leeuwenhoek, 2018, 111: 27–34; VL

no. 185.

Planctomonas deserti Liu et al. 2019, sp. nov.

Type strain: 13S1-3 = KCTC 49115 = CGMCC

1.16554.

Ref.: IJSEM, 2019, 69: 616–624.

Propionibacterium ruminifibrarum Vaidya et al. 2019,

sp. nov.

Type strain: JV5 = DSM 106771 = TISTR 2629.

Ref.: IJSEM, 2019, 69: 2584–2590.

Protaetiibacter intestinalis Heo et al. 2019, sp. nov.

Type strain: 2DFWR-13 = KACC 19321 = NBRC

113050.

Ref.: IJSEM, 2019, 69: 2101–2107.

Rhodococcus subtropicus Lee et al. 2019, sp. nov.

Type strain: C9-28 = KACC 19823 = DSM 107559.

Ref.: IJSEM, 2019, 69: 3128–3134.

Rhodoluna limnophila Pitt et al. 2019, sp. nov.

Type strain: 27D-LEPI = JCM 32926 = DSM 107804.

Ref.: IJSEM, 2019, 69: 3946–3954.

Saccharopolyspora rhizosphaerae Intra et al. 2019, sp.

nov.

Type strain: H219 = TBRC 8564 = NBRC 113388.

Ref.: IJSEM, 2019, 69: 1299–1305.

Salinibacterium hongtaonis Li et al. 2019, sp. nov.


Ref.: IJSEM, 2019, 69: 1093–1098.

Serinicoccus sediminis Lee et al. 2019, sp. nov.

Type strain: GP-T3-3 = KCTC 49173 = JCM 32825 =

KCCM 43309 = KACC 19850.

Ref.: IJSEM, 2019, 69: 1998–2003.

Specibacter cremeus Lee and Schumann 2019, sp. nov.

Type strain: C1-50 = KCTC 39557 = DSM 100066.

Ref.: IJSEM, 2019, 69: 1767–1774.

Spongiactinospora rosea Li et al. 2019, sp. nov.


2018019.

Ref.: IJSEM, 2019, 69: 427–433.

Streptacidiphilus bronchialis Nouioui et al. 2019, sp. nov.

S10

Type strain: 15-057A = DSM 106435 = ATCC BAA-

2934.

Ref.: IJSEM, 2019, 69: 1047–1056.

Streptomyces altiplanensis Cortés-Albayay et al. 2019,

sp. nov.

Type strain: HST21 = DSM 107267 = CECT 9647.

Ref.: IJSEM, 2019, 69: 2498–2505.

Streptomyces cadmiisoli Li et al. 2019, sp. nov.

Type strain: ZFG47 = CICC 11050 = JCM 32897.

Ref.: IJSEM, 2019, 69: 1024–1029.

Streptomyces cyaneochromogenes Tang et al. 2019, sp.

nov.

Type strain: MK-45 = CICC 11045 = KCTC 49099.

Ref.: IJSEM, 2019, 69: 2202–2207.

Streptomyces dangxiongensis Zhang et al. 2019, sp.

nov.

Type strain: Z022 = JCM 31053 = CGMCC 4.7273.

Ref.: IJSEM, 2019, 69: 2729–2734.

Streptomyces desertarenae Li et al. 2019, sp. nov.

Type strain: SYSU D8023 = CGMCC 4.7455 = KCTC

49023.


VL no. 187.

Streptomyces diacarni Li et al. 2019, sp. nov.

Type strain: LHW51701 = CCTCC AA 2018017 =

DSM 106126.

Ref.: IJSEM, 2019, 69: 99–104.

Streptomyces fodineus Kim et al. 2019, sp. nov.

Type strain: TW1S1 = KCTC 49013 = JCM 32404.

Ref.: IJSEM, 2019, 69: 1350–1354.

Streptomyces huasconensis Cortes-Albayay et al.

2019, sp. nov.

Type strain: HST28 = DSM 107268 = CECT 9648.

Ref.: IJSEM, 2019, 69: 2315–2322.

Streptomyces inhibens Jin et al. 2019, sp. nov.

Type strain: NEAU-D10 = CGMCC 4.7469 = DSM

106197.

Ref.: IJSEM, 2019, 69: 688–695.

Streptomyces otsuchiensis Terahara et al. 2019, sp.

nov.

Type strain: OTB305 = NBRC 113255 = TBRC 9682.

Ref.: IJSEM, 2019, 69: 3740–3744.

Streptomyces paromomycinus Komaki and Tamura

2019, sp. nov.

Streptomyces rimosus subsp. paromomycinus Coffey et

al. 1959 Rank elevation.

Type strain: NBRC 15454 = ATCC 14827 = DSM

41429 = JCM 4541 = JCM 4871 = NRRL 2455 =

VKM Ac-605.

Ref.: IJSEM, 2019, 69: 2577–2583.

Streptomyces reniochalinae Li et al. 2019, sp. nov.

Type strain: LHW50302 = CCTCC AA 2018013 =

DSM 106194.

Ref.: IJSEM, 2019, 69: 99–104.

Streptomyces rhizosphaericola Vargas Hoyos et al. 2019, sp. nov.

Type strain: 1AS2c = CMAA 1679 = NRRL B-65479

= DSM 105299.

Ref.: IJSEM, 2019, 69: 2431–2439.

Streptomyces roseifaciens van der Aart et al. 2019, sp.

nov.

Type strain: MBT76 = DSM 106196 = NCCB 100637.

Ref.: IJSEM, 2019, 69: 899–908.

Streptomyces tirandamycinicus Huang et al. 2019, sp.

nov.

Type strain: HNM0039 = CCTCC AA 2018045 =

KCTC 49236.

Ref.: Front Microbiol. 2019, 10: 482; VL no. 189.

Terrabacter ginsengisoli Jin et al. 2019, sp. nov.



Thermocatellispora soli Duangupama et al. 2019, sp.

nov.

Type strain: CHM3-46 = TBRC 7649 = NBRC 113148.

Ref.: IJSEM, 2019, 69: 134–138.

Thermomonospora catenispora Wu et al. 2019, sp.

nov.

Type strain: 3-22-3 = CGMCC 4.7155 = DSM 46802 =

ATCC BAA-2627.

Ref.: IJSEM, 2019, 69: 2465–2470.

NEW SUBSPECIES

Corynebacterium diphtheriae subsp. diphtheriae (Kruse 1886) Tagini et al. 2019, subsp. nov.

Type strain: ATCC 27010 = DSM 44123 = NCTC 11397.

S11

Ref.: Front Microbiol. 2018, 9: 9; VL no. 185.

Corynebacterium diphtheriae subsp. lausannense

Tagini et al. 2019, subsp. nov.

Type strain: CHUV2995 =CCUG 72509 = DSM

107520.

Ref.: Arch Microbiol., 2018, 200: 1067–1074; VL no.

185.

NEW COMBINATION

Clavibacter insidiosus (McCulloch 1925) Li and De

Boer 2019, comb. nov.

Basonym: Corynebacterium insidiosum (McCulloch

1925) Jensen 1934.

Type strain: ATCC 10253 = CCUG 38895 = CFBP

2404 = CIP 105048 = CIP 105363 = DSM 20157 =

ICMP 2621 = JCM 9664 = LMG 3663 = NCPPB

1109 = VKM Ac-1402.

Ref.: IJSEM, 2019, 69: 2069–2069.

Clavibacter tessellarius (Carlson and Vidaver 1982)

Li and De Boer et al. 2019, comb. nov.

Basonym: Clavibacter michiganense subsp.

tessellarius Carlson and Vidaver 1982.

Type strain: 78181 = ATCC 33566 = CCUG 38896 =

CIP 105364 = DSM 20741 = ICMP 7221 = JCM

9668 = LMG 7294 = NCPPB 3664 = PDDCC 7221

= VKM Ac-1406.

Ref.: IJSEM, 2019, 69: 2069–2069.

Cutibacterium acnes subsp. elongatum (Dekio et al.

2015) Dekio et al. 2019, comb. nov.

Basonym: Propionibacterium acnes subsp. elongatum Dekio et al. 2015.

Type strain: K124 = JCM 18919 = NCTC 13655.

Ref.: IJSEM, 2019, 69: 1087–1092.

Glutamicibacter endophyticus (Wang et al. 2015)

Busse and Schumann 2019, comb. nov.

Basonym: Arthrobacter endophyticus Wang et al.

2015.

Type strain: EGI 6500322 = DSM 28750 = KCTC

29490 = JCM 30091.

Ref.: IJSEM, 2019, 69: 1057–1059.

Micromonospora endophytica (Xie et al. 2011) Li et

al. 2019, comb. nov.

Basonym: Jishengella endophytica Xie et al. 2011.

Type strain: 202201 = CGMCC 4.5597 = DSM

45430.

Ref.: IJSEM, 2019, 69: 715–720.

Micromonospora zingiberis (Thawai et al. 2018)

Kuncharoen et al. 2019, comb. nov.

Basonym: Jishengella zingiberis Thawai et al. 2018.

Type strain: PLAI1-1 = TBRC 7644 = NBRC 113144 = JCM 32592.

Ref.: IJSEM, 2019, 69: 2884–2891.

Parolsenella massiliensis (Bilen et al. 2018)

Sakamoto et al. 2019, comb. nov.

Basonym: Libanicoccus massiliensis Bilen et al.

2018.

Type strain: Marseille-P3237 = JCM 33000 = CCUG

71182.

Ref.: IJSEM, 2019, 69: 1123–1129.

Pseudarthrobacter enclensis (Dastager et al. 2015)

Busse and Schumann 2019, comb. nov.

Basonym: Arthrobacter enclensis Dastager et al.

2015.

Type strain: NIO-1008 = DSM 25279 = NCIM 5488.

Ref.: IJSEM, 2019, 69: 3508–3511.

Pseudolysinimonas kribbensis (Jang et al. 2013) Heo

et al. 2019, comb. nov.

Basonym: Lysinimonas kribbensis Jang et al. 2013.

Type strain: MSL-13=DSM 19272 = JCM 16015 =

KCTC 19267.

Ref.: IJSEM, 2019, 69: 2101–2107.

Streptacidiphilus griseoplanus (Backus et al. 1957)

Nouioui et al. 2019, comb. nov.

Basonym: Streptomyces griseoplanus Backus et al.

1957.

Type strain: DSM 40009 = NBRC 12779 = ISP 5009

= RIA 1046 = CBS 505.68 = ATCC 19766 = AS

4.1868.

Ref.: IJSEM, 2019, 69: 1047–1056.

Yinghuangia catbensis (Sakiyama et al. 2014)

Komaki and Tamura 2019, comb. nov.

Basonym: Streptomyces catbensis Sakiyama et al.

2014.

Type strain: VN07A0015 = NBRC 107860 = VTCC-

A-1889 = VTCC 41889.

Ref.: IJSEM, 2019, 69: 2263–2267.

Yinghuangia seranimata (Wang et al. 2012) Komaki

and Tamura 2019, comb. nov.

Basonym: Streptomyces seranimatus Wang et al. 2012.

Type strain: YIM 45720 = DSM 41883 = BCRC 16903 = CCTCC AA 206006.

S12

Ref.: IJSEM, 2019, 69: 2263–2267.

EMENDATION OF CLASS

Actinobacteria Stackebrandt et al. 1997 emend.

Nouioui et al. 2018

Type order: not designated.

Ref.: Front Microbiol., 2018, 9: 2007; LCTO no. 29.

A member of the phylum "Actinobacteria".

EMENDATION OF ORDER

*References of emendations by Nouioui et al. 2018, marked with an asterisk, are ‘Front Microbiol., 2018, 9:

2007’ and ‘List of changes in taxonomic opinion no. 29 [IJSEM, 2019, 69: 13–32] (LCTO no. 29)’.

Corynebacteriales Goodfellow and Jones 2015

emend. Nouioui et al. 2018*

Type genus: Corynebacterium Lehmann and

Neumann 1896.

A member of the class Actinobacteria.

Micrococcales Prévot 1940 emend. Nouioui et al.

2018*

Type genus: Micrococcus Cohn 1872.


Mycobacteriales Jahnke 1924 emend. Gupta 2019

Type genus: Mycobacterium Lehmann and Neumann

1896.



Propionibacteriales (Rainey et al. 1997) Patrick and

McDowell 2015 emend. Nouioui et al. 2018*

Type genus: Propionibacterium Orla-Jensen 1909.


Streptosporangiales Goodfellow 2015 emend.

Nouioui et al. 2018*

Type genus: Streptosporangium Couch 1955.


EMENDATION OF FAMILY

*References of emendations by Nouioui et al. 2018, marked with an astarisk, are ‘Front Microbiol., 2018, 9:


Actinomycetaceae Buchanan 1918 emend. Nouioui et

al. 2018*

Type genus: Actinomyces Harz 1877.

A member of the order Actinomycetales.

Atopobiaceae Gupta et al. 2013 emend. Nouioui et al. 2018*

Type genus: Atopobium Collins and Wallbanks 1993. A member of the order Coriobacteriales.

Cellulomonadaceae Stackebrandt and Prauser 1991


Type genus: Cellulomonas Bergey et al. 1923.

A member of the order Micrococcales.

Corynebacteriaceae Lehmann and Neumann 1907


Type genus: Corynebacterium Lehmann and

Neumann 1896.

A member of the order Corynebacteriales.

Demequinaceae Ue et al. 2011 emend. Nouioui et al.

2018*

Type genus: Demequina Yi et al. 2007.


Dermacoccaceae Schumann and Stackebrandt 2000


Type genus: Dermacoccus Stackebrandt et al. 1995.


Dermatophilaceae Austwick 1958 emend. Nouioui et

al. 2018*

Type genus: Dermatophilus (Van Saceghem 1915)

Gordon 1964.


Eggerthellaceae Gupta et al. 2013 emend. Nouioui et al. 2018*

Type genus: Eggerthella Kageyama et al. 1999.

A member of the order Eggerthellales.

Gordoniaceae Rainey et al. 1997 emend. Nouioui et al. 2018*

S13

Type genus: Gordonia corrig. (ex Tsukamura 1971)

Stackebrandt et al. 1989.


Intrasporangiaceae Rainey et al. 1997 emend.


Type genus: Intrasporangium Kalakoutskii et al.

1967.


Jonesiaceae Stackebrandt et al. 1997 emend. Nouioui

et al. 2018*

Type genus: Jonesia Rocourt and Stackebrandt 1987.


Micromonosporaceae Krasil'nikov 1938 emend.


Type genus: Micromonospora Ørskov 1923.

A member of the order Micromonosporales.

Mycobacteriaceae Chester 1897 emend. Nouioui et

al. 2018*

Type genus: Mycobacterium Lehmann and Neumann

1896.


Nocardiaceae Castellani and Chalmers 1919 emend.


Type genus: Nocardia Trevisan 1889.


Nocardioidaceae Nesterenko et al. 1990 emend.


Type genus: Nocardioides Prauser 1976.

A member of the order Propionibacteriales.

Promicromonosporaceae Rainey et al. 1997 emend.


Type genus: Promicromonospora Krassilnikov et al.

1961. A member of the order Micrococcales.

Pseudonocardiaceae Embley et al. 1989 emend.


Type genus: Pseudonocardia Henssen 1957.

A member of the order Pseudonocardiales.

Streptomycetaceae Waksman and Henrici 1943


Type genus: Streptomyces Waksman and Henrici

1943.

A member of the order Streptomycetales.

Streptosporangiaceae Goodfellow et al. 1990 emend.


Type genus: Streptosporangium Couch 1955.

A member of the order Streptosporangiales.

EMENDATION OF GENUS



Actinokineospora Hasegawa 1988 emend. Nouioui et

al. 2018*

Type species: Actinokineospora riparia Hasegawa

1988.


Actinomyces Harz 1877 emend. Nouioui et al. 2018*

Type species: Actinomyces bovis Harz 1877.

A member of the family Actinomycetaceae.

Actinoplanes Couch 1950 emend. Nouioui et al.

2018*

Type species: Actinoplanes philippinensis Couch

1950.


Amycolatopsis Lechevalier et al. 1986 emend.

Nouioui et al. 2018* Type species: Amycolatopsis orientalis (Pittenger and

Brigham 1956) Lechevalier et al. 1986.


Corynebacterium Lehmann and Neumann 1896

emend. Baek et al. 2018

Type species: Corynebacterium diphtheriae (Kruse

1886) Lehmann and Neumann 1896.


A member of the family Corynebacteriaceae.

Corynebacterium Lehmann and Neumann 1896


Type species: Corynebacterium diphtheriae (Kruse

1886) Lehmann and Neumann 1896.

A member of the family Corynebacteriaceae.

Cutibacterium Scholz and Kilian 2016 emend. Dekio

et al. 2019 Type species: Cutibacterium acnes (Gilchrist 1900)

S14

Scholz and Kilian 2016 emend. Dekio et al. 2019.

Ref.: IJSEM, 2019, 69: 1087–1092.


Demequina Yi et al. 2007 emend. Nouioui et al.

2018*

Type species: Demequina aestuarii Yi et al. 2007.

A member of the family Demequinaceae.

Gardnerella Greenwood and Pickett 1980 emend.

Vaneechoutte et al. 2019

Type species: Gardnerella vaginalis (Gardner and

Dukes 1955) Greenwood and Pickett 1980.

Ref.: IJSEM, 2019, 69: 679–687.

A member of the family Bifidobacteriaceae.

Glycomyces Labeda et al. 1985 emend. Li et al. 2018

Type species: Glycomyces harbinensis Labeda et al.

1985.


1093; LCTO no. 29.

A member of the family Glycomycetaceae.

Gordonibacter Würdemann et al. 2009 emend.

Danylec et al. 2019

Type species: Gordonibacter pamelaeae Würdemann

et al. 2009.

Ref.: IJSEM, 2019, 69: 2527–2532.

A member of the family Eggerthellaceae.

Gulosibacter Manaia et al. 2004 emend. Nouioui et

al. 2018*

Type species: Gulosibacter molinativorax Manaia et

al. 2004.


Haloechinothrix Tang et al. 2010 emend. Nouioui et

al. 2018*

Type species: Haloechinothrix alba Tang et al. 2010.


Intrasporangium Kalakoutskii et al. 1967 emend.


Type species: Intrasporangium calvum Kalakoutskii

et al. 1967.

A member of the family Intrasporangiaceae.

Kitasatospora corrig. Ōmura et al. 1983 emend.


Type species: Kitasatospora setae corrig. Ōmura et al.

1983.

A member of the family Streptomycetaceae.

Knoellia Groth et al. 2002 emend. Nouioui et al.

2018*

Type species: Knoellia sinensis Groth et al. 2002.


Lentzea Yassin et al. 1995 emend. Nouioui et al.

2018*

Type species: Lentzea albidocapillata Yassin et al.

1995.


Lysinimonas Jang et al. 2013 emend. Heo et al. 2019

Type species: Lysinimonas soli Jang et al. 2013.

Ref.: IJSEM, 2019, 69: 2101–2107.


Microlunatus Nakamura et al. 1995 emend. Nouioui

et al. 2018*

Type species: Microlunatus phosphovorus Nakamura

et al. 1995.


Micromonospora Ørskov 1923 emend. Nouioui et al. 2018*

Type species: Micromonospora chalcea (Foulerton

1905) Ørskov 1923.


Modestobacter Mevs et al. 2000 emend. Reddy et al.

2007 emend. Xiao et al. 2011 emend. Qin et al.

2013 emend. Montero-Calasanz et al. 2019

Type species: Modestobacter multiseptatus Mevs et

al. 2000.

Ref.: IJSEM, 2019, 69: 1537–1545.

A member of the family Geodermatophilaceae.

Nesterenkonia Stackebrandt et al. 1995 emend.

Machin et al. 2019

Type species: Nesterenkonia halobia (Onishi and

Kamekura 1972) Stackebrandt et al. 1995.

Ref.: IJSEM, 2019, 69: 1960–1966.


Nonomuraea corrig. Zhang et al. 1998 emend. Cao et

al. 2019

Type species: Nonomuraea pusilla corrig. (Nonomura

and Ohara 1971) Zhang et al. 1998.

Ref.: IJSEM, 2019, 69: 316–321.


Phycicoccus Lee 2006 emend. Nouioui et al. 2018*

Type species: Phycicoccus jejuensis Lee 2006.


Pseudarthrobacter Busse 2016 emend. Busse and

S15

Schumann 2019

Type species: Pseudarthrobacter polychromogenes

(Schippers-Lammertse et al. 1963) Busse 2016.

Ref.: IJSEM, 2019, 69: 3508–3511.


Rothia Georg and Brown 1967 emend. Nouioui et al.

2018*

Type species: Rothia dentocariosa (Onishi 1949)

Georg and Brown 1967.


Streptoacidiphilus Kim et al. 2003 emend. Nouioui et al. 2019

Type species: Streptoacidiphilus albus Kim et al.

2003.

Ref.: IJSEM, 2019, 69: 1047–1056.

A member of the family Streptomycetaceae.

Thermomonospora Henssen 1957 emend. Nouioui et

al. 2018*

Type species: Thermomonospora curvata Henssen

1957.

A member of the family Thermomonosporaceae.

EMENDATION OF SPECIES



Acaricomes phytoseiuli Pukall et al. 2006 emend.


Type strain: CSC = CCUG 49701 = DSM 14247 =

JCM 14300.

Acidimicrobium ferrooxidans Clark and Norris 1996


Type strain: ICP = DSM 10331 = JCM 15462 =

NBRC 103882.

Acidipropionibacterium acidipropionici (Orla-Jensen

1909) Scholz and Kilian 2016 emend. Nouioui et al. 2018*

Type strain: ATCC 25562 = CIP 103025 = DSM 4900.

Acidipropionibacterium jensenii (van Niel 1928)

Scholz and Kilian 2016 emend. Nouioui et al. 2018*

Type strain: ATCC 4868 = CCUG 48883 = CIP

103028 = DSM 20535.

Acidipropionibacterium thoenii (van Niel 1928)

Scholz and Kilian 2016 emend. Nouioui et al.

2018*


103029 = DSM 20276 = HAMBI 247 = JCM 6437

= LMG 16455.

Acidothermus cellulolyticus Mohagheghi et al. 1986


Type strain: 11B = ATCC 43068.

Actinoalloteichus hymeniacidonis Zhang et al. 2006


Type strain: HPA177 = CGMCC 4.2500 = DSM 45092 = JCM 13436.

Actinobaculum suis (Wegienek and Reddy 1982)

Lawson et al. 1997 emend. Nouioui et al. 2018*

Type strain: 50052 = Soltys 50052 = ATCC 33144 =

CIP 105361 = DSM 20639.

Actinokineospora diospyrosa Tamura et al. 1995


Type strain: YU8-1 = DSM 44255 = JCM 9921 =

NBRC 15665 = NRRL B-24047 = VKM Ac-1984.

Actinokineospora globicatena Tamura et al. 1995



NBRC 15664 = NRRL B-24048 = VKM Ac-1981.

Actinokineospora inagensis Tamura et al. 1995



NBRC 15663 = NRRL B-24050 = VKM Ac-1982.

Actinokineospora spheciospongiae Kämpfer et al. 2015 emend. Nouioui et al. 2018*

Type strain: EG49 = CCM 8480 = DSM 45935 =

LMG 27700.

Actinokineospora terrae Tamura et al. 1995 emend.



NBRC 15668 = NRRL B-24049 = VKM Ac-1983.

Actinomadura atramentaria Miyadoh et al. 1987


Type strain: SF 2197 = DSM 43919 = HUT 6547 =

JCM 6250 = KCTC 9620 = NBRC 14695 = NCIMB 12618.

S16

Actinomadura flavalba Qin et al. 2009 emend.


Type strain: CCTCC AA 208017 = DSM 45200 =

JCM 16896 = YIM 61435.

Actinomadura hibisca Tomita et al. 1991 emend.


Type strain: P157-2 = ATCC 53557 = DSM 44148 =

JCM 9627 = NBRC 15177 = NCIMB 13253.

Actinomadura kijaniata Horan and Brodsky 1982


Type strain13-363 = ATCC 31588 = DSM 43764

=JCM 3306 = NBRC 14229 = NRRL 12069 =

NRRL B-16261 = SCC 1256 = VKM Ac-874.

Actinomadura macra Huang 1980 emend. Nouioui et

al. 2018*

Type strain: Pfizer F.D. 25934 = ATCC 31286 =

BCRC 13378 = CCRC 13378 = CIP 105532 =

DSM 43862 IMET 9754 = JCM 3287 = KCTC

9342 = NBRC 14102 = NRRL B-16124.

Actinomadura madurae (Vincent 1894) Lechevalier

and Lechevalier 1970 emend. Nouioui et al. 2018*

Type strain: ATCC 19425 = CCM 136 = CCUG

32944 = CECT 3043 = CIP 105487 = DSM 43067

= HAMBI 1926 = IAM 14277 = IFM 585 = IMET

9585 = JCM 7436 = KCTC 9192 = NBRC 14623 =

NCIMB 13469 = NCTC 5654 = NRRL B-3843 =

VKM Ac-809.

Actinomadura mexicana Quintana et al. 2004 emend.


Type strain: A290 = DSM 44485 = JCM 13236 =

NRRL B-24203.

Actinomadura meyerae corrig. Quintana et al. 2004


Type strain: A288 = DSM 44715 = JCM 13237 =

NRRL B-24247.

Actinomadura oligospora Mertz and Yao 1986


Type strain: A80190.1 = ATCC 43269 = JCM 10648 =

NRRL 15878.

Actinomadura pelletieri (Laveran 1906) Lechevalier

and Lechevalier 1970 emend. Nouioui et al. 2018*


105483 = DSM 43383 = HUT 6549 = IAM 12634

= IMET 9693 = JCM 3388 = KCTC 9110 = NBRC 103052 = NCTC 4162 = NRRL B-3997.

Actinomadura rubrobrunea (ex Krasil'nikov et al.

1968) Kroppenstedt et al. 1991 emend. Nouioui et

al. 2018*

Type strain: ATCC 49883 = CIP 105486 = DSM

43750 = IMET 9705 = INMI 2991 = JCM 7345 =

KCTC 9493 = NBRC 15275 = VKM Ac-1470.

Actinomadura viridilutea (Agre and Guzeva 1975)

Zhang et al. 2001 emend. Nouioui et al. 2018*

Type strain: ATCC 33925 = BCRC 13638 = CCRC

13638 = DSM 44433 =IMET 9742 = INMI 187 =

JCM 3398 = JCM 7346 = NBRC 14480.

Actinomyces dentalis Hall et al. 2005 emend.


Type strain: R-18165 = CCUG 48064 = CIP 108337 =

DSM 19115.

Actinomyces denticolens Dent and Williams 1984


Type strain: Sh 8/4303 = ATCC 43322 = CCUG

32758 = CIP 103126 = DSM 20671 = NCTC

11490.

Actinomyces israelii (Kruse 1896) Lachner-Sandoval

1898 emend. Nouioui et al. 2018*


103259 = DSM 43320 = JCM 12964 = NCTC

12972.

Actinomyces massiliensis Renvoise et al. 2009


Type strain: 4401292 = CCUG 53522 = CSUR P18 =

DSM 23047 = JCM 16130.

Actinomyces naeslundii Thompson and Lovestedt


Type strain: Howell 279 = ATCC 12104 = CCUG

18310 = CCUG 2238 = CCUG 32832 = CCUG

35333 = CDC W826 = CIP 103128 = DSM 43013

= JCM 8349 = NCTC 10301.

Actinomyces radicidentis Collins et al. 2001 emend.


Type strain: CCUG 36733 = CIP 106352 = DSM

15433.

Actinomyces ruminicola An et al. 2006 emend.


Type strain: B71 = CGMCC 1.5030 = DSM 27982 =

JCM 13352.

Actinomyces slackii Dent and Williams 1986 emend.

S17


Type strain: Sh 13/4563 = ATCC 49928 = CCUG

32792 = CIP 103130 = NCTC 11923.

Actinomyces timonensis Renvoise et al. 2010 emend.


Type strain: 7400942 = CCUG 55928 = CSUR P35 =

DSM 23838.

Actinomyces urogenitalis Nikolaitchouk et al. 2000



15434.

Actinomycetospora chiangmaiensis Jiang et al. 2008



JCM 15998 = YIM 6.

Actinoplanes cyaneus Terekhova et al. 1987 emend.


Type strain: DSM 46137 = INA 1569 = JCM 9082 =

NBRC 14990 = VKM Ac-1095.

Actinoplanes derwentensis Goodfellow et al. 1990


Type strain: LA 107 = ATCC 49798 = DSM 43941 =

JCM 7556 = NBRC 14935 = NCIB 12875 =

NCIMB 12875 = NRRL B-16692.

Actinoplanes friuliensis Aretz et al. 2001 emend.


Type strain: DSM 45797 = DSM 7358 = HAG

010964.

Actinoplanes globisporus (Thiemann 1967)

Stackebrandt and Kroppenstedt 1988 emend.


Type strain: ATCC 23056 = DSM 43857 = DSM

43894 = JCM 3186 = NBRC 13912.

Actinoplanes italicus Beretta 1973 emend. Nouioui et

al. 2018*

Type strain: ATCC 27366 = DSM 43146 = JCM 3165

= NBRC 13911 = NRRL B-16722.

Actinoplanes philippinensis Couch 1950 emend.


Type strain: ATCC 12427 = DSM 43019 = HAMBI

1927 = JCM 3001 = NBRC 13878 = NRRL 2506 =

VKM Ac-842.

Actinoplanes rectilineatus Lechevalier and Lechevalier 1975 emend. Nouioui et al. 2018*


= NBRC 13941 = NRRL B-16090.

Actinoplanes regularis (Couch 1963) Stackebrandt

and Kroppenstedt 1988 emend. Nouioui et al.

2018*

Type strain: DSM 43151 = HAMBI 1928 = JCM 3062

= NBRC 12514 = NRRL B-3347 = VKM Ac-650.

Actinopolymorpha alba Cao et al. 2009 emend.



JCM 16897 = YIM 48868.

Actinopolymorpha singaporensis Wang et al. 2001


Type strain: DSM 22024 = IM 7744 = JCM 10761 =

NBRC 100040 = NRRL B-24113.

Actinopolyspora erythraea Tang et al. 2011 emend.


Type strain: CCTCC M 208247 = DSM 45583 =

KCTC 19372 = YIM 90600.

Actinopolyspora halophila Gochnauer et al. 1975


Type strain: ATCC 279 = ATCC 27976 = DSM 43834

= DSM 46500 = JCM 3278 = NBRC 14106 =

VKM Ac-871.

Actinopolyspora mzabensis Meklat et al. 2013


Type strain: H55 = CCUG 62965 = DSM 45460.

Actinopolyspora righensis Meklat et al. 2014 emend.


Type strain: H23 = CCUG 63368 = DSM 45501 =

MTCC 11562.

Actinopolyspora saharensis Meklat et al. 2013


Type strain: H32 = CCUG 63367 = DSM 45459 =

DSM 46666.

Actinosynnema mirum Hasegawa et al. 1978 emend.


Type strain: ATCC 29888 = DSM 43827 = IMRU

3971 = JCM 3225 = NBRC 14064 = NRRL B-

12336 = VKM Ac-843.

Actinosynnema pretiosum Hasegawa et al. 1983


Type strain: C-15003 = ATCC 31281 = DSM 44132 = FERM P-3992 = JCM 7344 = NBRC 15621 =

S18

NRRL B-16060 = VKM Ac-1963.

Aeromicrobium erythreum Miller et al. 1991 emend.


Type strain: ATCC 51598 = DSM 8599 = JCM 8359 =

LMG 16472 = NBRC 15406 = NRRL B-3381.

Agreia bicolorata Evtushenko et al. 2001 emend.


Type strain: DSM 14575 = JCM 12206 = NBRC

103053 = UCM Ac-620 = VKM Ac-1804.

Agrococcus baldri Zlamala et al. 2002 emend.


Type strain: V-108 = CCM 4953 = DSM 14215 =

JCM 12132 = NBRC 103055.

Agrococcus lahaulensis Mayilraj et al. 2006 emend.


Type strain: K22-21 = DSM 17612 = JCM 14301 =

MTCC 7154.

Agromyces cerinus Zgurskaya et al. 1992 emend.


Type strain: ATCC 51762 = CIP 103632 = DSM 8595

= JCM 9083 = LMG 16155 = NBRC 15780 =

VKM Ac-1340.

Agromyces subbeticus Jurado et al. 2005 emend.


Type strain: Z33 = DSM 16689 = HKI 0340 = JCM

14324 = NCIMB 14025.

Allokutzneria albata (Tomita et al. 1993) Labeda and

Kroppenstedt 2008 emend. Nouioui et al. 2018*

Type strain: R-761-7 = ATCC 55061 = DSM 44149 =

JCM 9917 = NBRC 101910 = NRRL B-24461.

Allonocardiopsis opalescens Du et al. 2013 emend.


Type strain: I10A-01259 = CPCC 203428 = DSM

45601.

Alloscardovia criceti (Okamoto et al. 2007) Killer et

al. 2007 emend. Nouioui et al. 2018*

Type strain: OMB105 = DSM 17774 = JCM 13493.

Alloscardovia omnicolens Huys et al. 2007 emend.


Type strain: CCUG 31649 = DSM 21503 = LMG

23792.

Amycolatopsis alba Mertz and Yao 1993 emend. Nouioui et al. 2018*

Type strain: A83850 = ATCC 51368 = DSM 44262 =

JCM 10030 = NBRC 15602 = NRRL 18532.

Amycolatopsis australiensis Tan et al. 2006 emend.


Type strain: GY048 = DSM 44671 = JCM 15587 =

NCIMB 14142.

Amycolatopsis azurea (Ōmura et al. 1983) Henssen et al. 1987 emend. Nouioui et al. 2018*

Type strain: AM-3696 = ATCC 51273 = DSM 43854

= JCM 3275 = NBRC 14573 = NRRL 11412 =

VKM Ac-1418.

Amycolatopsis balhimycina Wink et al. 2003 emend.


Type strain: FH 1894 = DSM 44591 = JCM 12668 =

NRRL B-24207.

Amycolatopsis benzoatilytica Majumdar et al. 2006


Type strain: AK 16/65 = ATCC 55165 = DSM 43387

= IMRU 1389 = JCM 13851.

Amycolatopsis coloradensis Labeda 1995 emend.


Type strain: AV-290 = ATCC 53629 = DSM 44225 =

IMSNU 22096 = JCM 9869 = NBRC 15804 =

NRRL 3218 = VKM Ac-1732.

Amycolatopsis decaplanina Wink et al. 2004 emend.


Type strain: FH 1845 = DSM 44594 = JCM 12669 =

NRRL B-24209.

Amycolatopsis jejuensis Lee 2006 emend. Nouioui et

al. 2018*

Type strain: N7-3 = DSM 45042 = JCM 13280 =

NRRL B-24427.

Amycolatopsis keratiniphila Al-Musallam et al. 2003


Type strain: D2 = DSM 44409 = JCM 12683 = NRRL

B-24117.

Amycolatopsis lurida (Lechevalier et al. 1986)

Stackebrandt et al. 2004 emend. Nouioui et al.

2018*


= LMG 4064 = NBRC 14500 = NRRL 2430 =

NRRL WC-3860 = VKM Ac-1242.

Amycolatopsis marina Bian et al. 2009 emend. Nouioui et al. 2018*

S19

Type strain: Ms392A = CGMCC 4.3568 = DSM

45569 = JCM 16121 = NBRC 104263.

Amycolatopsis mediterranei (Margalith and Beretta

1960) Lechevalier et al. 1986 emend. Nouioui et al.

2018*


107074 = DSM 43304 = ISP 5501 = JCM 4789 =

NBRC 13415 = NRRL B-3240 = VKM Ac-798.

Amycolatopsis nigrescens Groth et al. 2007 emend.


Type strain: CSC17Ta-90 = DSM 44992 = HKI 0330

= JCM 14717 = NRRL B-24473.

Amycolatopsis niigatensis Ding et al. 2007 emend.


Type strain: LC11 = CCTCC AB206020 = DSM

45165 = IAM 15388 = JCM 21832.

Amycolatopsis orientalis (Pittenger and Brigham

1956) Lechevalier et al. 1986 emend. Nouioui et al. 2018*

Type strain: M43-05865 = ATCC 19795 = CIP 107113

= DSM 40040 = ISP 5040 = JCM 4235 = JCM

4600 = NBRC 12806 = NRRL 2450 = UNIQEM

181 = VKM Ac-866.

Amycolatopsis pretoriensis Labeda et al. 2003


Type strain: ARC OV1 0181 = DSM 44654 = JCM

12673 = NRRL B-24133.

Amycolatopsis regifaucium Tan et al. 2007 emend.


Type strain: GY080 = DSM 45072 = JCM 15588 =

NCIMB 14277.

Amycolatopsis rifamycinica Bala et al. 2004 emend.


Type strain: NT 19 = ATCC 27643 = DSM 46095 =

JCM 12674

Amycolatopsis rubida Huang et al. 2001 emend.


Type strain: 13.4 = AS 4.1541 = CIP 107102 = DSM

44637 = JCM 10871 = NBRC 100041 = NRRL B-

24150.

Amycolatopsis saalfeldensis Carlsohn et al. 2007


Type strain: HKI 0457 = DSM 44993 = JCM 14909 =

NRRL B-24474.

Amycolatopsis sacchari Goodfellow et al. 2001


Type strain: K24 = CIP 107029 = DSM 44468 = JCM

11272 = KCTC 9863 = NBRC 100339.

Amycolatopsis sulphurea Lechevalier et al. 1986



= NBRC 13270 = VKM Ac-1244.

Amycolatopsis thermoflava Chun et al. 1999 emend.


Type strain: N-1165 = CIP 106795 = DSM 44574 =

JCM 10669 = NBRC 14333 = NRRL B-24140.

Amycolatopsis tolypomycina Wink et al. 2003 emend.



= NBRC 14664 = NRRL B-24205.

Amycolatopsis vancoresmycina Wink et al. 2003


Type strain: ST 101170 = DSM 44592 = JCM 12675

= NRRL B-24208.

Amycolatopsis xylanica Chen et al. 2010 emend.


Type strain: CCM 7627 = CPCC 202699 = DSM

45285 = KCTC 19581.

Antricoccus suffuscus Lee 2015 emend. Nouioui et

al. 2018*

Type strain: C4-31 = DSM 100065 = KCTC 39556.

Arcanobacterium haemolyticum (ex MacLean et al. 1946) Collins et al. 1983 emend. Nouioui et al.

2018*

Type strain: ATCC 9345 = CCUG 17215 = CCUG

33552 = CIP 103370 = DSM 20595 = LMG 16163

= NBRC 15585 = NCTC 8452.

Arcanobacterium phocae Pascual Ramoset al. 1997


Type strain: M1590/94/3 = CIP 105740 = DSM 10002

= LMG 18722.

Arthrobacter alpinus Zhang et al. 2010 emend.


Type strain: S6-3 = CGMCC 1.8950 = DSM 22274.

Arthrobacter castelli Heyrman et al. 2005 emend.


Type strain: DSM 16402 = JCM 21794 = LMG 22283.

S20

Arthrobacter crystallopoietes Ensign and Rittenberg



20117 = JCM 2522 = LMG 3819 = NBRC 14235 =

VKM Ac-1107.

Arthrobacter cupressi Zhang et al. 2012 emend.


Type strain: D48 = CGMCC 1.10783 = DSM 24664.

Arthrobacter enclensis Dastager et al. 2015 emend.



Arthrobacter globiformis (Conn 1928) Conn and

Dimmick 1947 emend. Nouioui et al. 2018*

Type strain: AS 1.1894 = ATCC 8010 = BCRC 10598

= CCRC 10598 = CCUG 12157 = CCUG 28997 =

CCUG 581 = CIP 81.84 = DSM 20124 = HAMBI

1863 = HAMBI 88 = IAM 12438 = ICPB 3434 =

JCM 1332 = LMG 3813 = NBRC 12137 = NCIMB

8907 = NRIC 0151 = NRRL B-2979 = VKM Ac-

1112.

Atopobium fossor (Bailey and Love 1986) Kageyama

et al. 1999 emend. Nouioui et al. 2018*


15642 = JCM 9981 = NCTC 11919 = VPB 2127.

Atopobium minutum (Hauduroy et al. 1937) Collins

and Wallbanks 1993 emend. Nouioui et al. 2018*

Type strain: VPI 9428 = ATCC 33267 = CCUG 31167

= DSM 20586 = JCM 1118 = LMG 9439 = NCFB

2751 = NCIMB 702751.

Beutenbergia cavernae Groth et al. 1999 emend.


Type strain: ATCC BAA-8 = CCUG 43141 = CIP

106362 = DSM 12333 = HKI 0122 = JCM 11478 =

NBRC 16432.

Bifidobacterium actinocoloniiforme Killer et al.


Type strain: LISLUCIII-P2 = CCM 7728 = DSM

22766.

Bifidobacterium adolescentis Reuter 1963 emend.


Type strain: AS 1.2190 = ATCC 15703 = BCRC

14606 = CCRC 14606 = CCUG 17359 = CCUG

18363 = CIP 64.59 = DSM 20083 = JCM 1275 =

LMG 10502 = NCAIM B.01822 = NCTC 11814.

Bifidobacterium asteroids Scardovi and Trovatelli



14659 = CCRC 14659 = CCUG 24607 = DSM

20089 = JCM 8230 = LMG 10735.

Bifidobacterium bifidum (Tissier 1900) Orla-Jensen


Type strain: Ti = AS 1.2212 = ATCC 29521 = BCRC

14615 = CCRC 14615 = CCUG 18364 = CCUG

45217 = CIP 56.7 = DSM 20456 = HAMBI 1380 =

IFO 14252 = JCM 1255 = LMG 11041 = LMG

8810 = NBRC 100015 = NBRC 14252 = NCFB

2715 = NCIMB 702715 = NCTC 13001.

Bifidobacterium bohemicum Killer et al. 2011


Type strain: JEMLUCVIII-4 = CCM 7729 = DSM

22767.

Bifidobacterium bombi Killer et al. 2009 emend.


Type strain: BlucI/TP = ATCC BAA-1567 = DSM

19703.

Bifidobacterium breve Reuter 1963 emend. Nouioui

et al. 2018*


11846 = CCRC 11846 = CCUG 18365 = CCUG

30511 A = CIP 64.69 = DSM 20213 = HAMBI 558

= JCM 1192 = LMG 11042 = NCAIM B.01820 =

NCFB 2257 = NCIMB 702257 = NCTC 11815.

Bifidobacterium catenulatum Scardovi and Crociani



14667 = CCRC 14667 = CCUG 18366 = CIP

104175 = DSM 16992 = DSM 20103 = HAMBI

560 = JCM 1194 = LMG 11043 = NCFB 2246 =

NCIMB 702246.

Bifidobacterium coryneforme (ex Scardovi and

Trovatelli 1969) Biavati et al. 1982 emend. Nouioui

et al. 2018*


14675 = CCRC 14675 = CCUG 34986 = DSM

20216 = JCM 5819 = LMG 18911.

Bifidobacterium crudilactis Delcenserie et al. 2013


Type strain: CNCM I-3342 = FR62/b/3 = LMG

23609.

Bifidobacterium cuniculi Scardovi et al. 1979 emend.

S21


Type strain: RA93 = AS 1.2239 = ATCC 27916 =

BCRC 14672 = CCRC 14672 = CCUG 24610 =

CIP 103379 = DSM 20435 = JCM 1213 = LMG

10738.

Bifidobacterium dentium Scardovi and Crociani 1974



14662 = CCRC 14662 = CCUG 18367 = CIP

104176 = DSM 20436 = HAMBI 556 = JCM 1195

= LMG 10506 = LMG 11045 = NCFB 2243 =

NCIMB 702243 = NCTC 11816.

Bifidobacterium gallicum Lauer 1990 emend.


Type strain: P6 = AS 1.2274 = ATCC 49850 = CCUG

34979 = CIP 103417 = DSM 20093 = JCM 8224 =

LMG 11596.

Bifidobacterium globosum (ex Scardovi and


et al. 2018*

Type strain: RU 224 = AS 1.2203 = ATCC 25865 =

BCRC 14663 = CCRC 14663 = CCUG 34978 =

CCUG 39904 = DSM 20092 = HAMBI 1376 =

HAMBI 563 = JCM 5820 = LMG 11569.

Bifidobacterium indicum Scardovi and Trovatelli



14674 = CCRC 14674 = CCUG 34985 = DSM

20214 = JCM 1302 = LMG 11587.

Bifidobacterium lemurum Modesto et al. 2015


Type strain: LMC 13 = DSM 28807 = JCM 30168.

Bifidobacterium magnum Scardovi and Zani 1974



14676 = CCRC 14676 = CCUG 34987 = DSM

20222 = HAMBI 569 = JCM 1218 = LMG 11591.

Bifidobacterium merycicum Biavati and Mattarelli


Type strain: Ru915B = AS 1.2273 = ATCC 49391 =

CCUG 34976 = DSM 6492 = JCM 8219 = LMG

11341.

Bifidobacterium minimum Biavati et al. 1982 emend.


Type strain: AS 1.2233 = ATCC 27538 = BCRC 14666 = CCRC 14666 = CCUG 34982 = DSM

20102 = JCM 5821 = LMG 11592.

Bifidobacterium mongoliense Watanabe et al. 2009


Type strain: YIT 10443 = DSM 21395 = JCM 15461.

Bifidobacterium pseudocatenulatum Scardovi et al.


Type strain: B1279 = AS 1.2277 = ATCC 27919 =

BCRC 15476 = CCRC 15476 = CCUG 34989 =

CIP 104168 = DSM 20438 = HAMBI 562 = JCM

1200 = LMG 10505.

Bifidobacterium pseudolongum Mitsuoka 1969


Type strain: PNC-2-9G = AS 1.2185 = ATCC 25526 =

BCRC 14673 = CCRC 14673 = CCUG 34981 =

CIP 105352 = DSM 20099 = HAMBI 113 = JCM

1205 = LMG 11571.

Bifidobacterium pullorum Trovatelli et al. 1974



14678 = CCRC 14678 = CCUG 35235 = CIP

107006 = DSM 20433 = JCM 1214 = LMG 11572.

Bifidobacterium ruminantium Biavati and Mattarelli


Type strain: Ru 687 = AS 1.2241 = ATCC 49390 =

CCUG 34975 = DSM 6489 = JCM 8222 = LMG

12588.

Bifidobacterium scardovii Hoyles et al. 2007 emend.


Type strain: CCUG 13008 = DSM 13734 = JCM

12489.

Bifidobacterium subtile Biavati et al. 1982 emend.



14660 = CCRC 14660 = CCUG 34980 = DSM

20096 = JCM 5822 = LMG 11597.

Bifidobacterium thermacidophilum Dong et al. 2000


Type strain: 36 = AS 1.2282 = DSM 15837 = JCM

11165 = LMG 21395.

Bifidobacterium thermophilum corrig. Mitsuoka



14669 = CCRC 14669 = CCUG 34983 = CIP

105420 = DSM 20210 = HAMBI 111 = JCM 1207 = LMG 11573.

S22

Brachybacterium faecium Collins et al. 1988 emend.


Type strain: 6-10 = ATCC 43885 = CCUG 32293 =

CIP 103333 = DSM 4810 = IEGM 403 = JCM

11609 = NBRC 14762 = NCIB 9860 = NCIMB

9860 = VKM Ac-1423.

Brachybacterium squillarum Park et al. 2011 emend.


Type strain: M-6-3 = JCM 16464 = KACC 14221.

Brevibacterium epidermidis Collins et al. 1983


Type strain: ATCC 35514 = BCRC 12215 = CCM

4098 = CCRC 12215 = CCUG 30540 = CIP

102110 = DSM 20660 = IMET 10998 = JCM 2593

= KCTC 3090 = NBRC 14811 = NCDO 2286 =

NCIMB 702286 = NCTC 12997 = VKM Ac-2108.

Brevibacterium massiliense Roux and Raoult 2009


Type strain: 5401308 = CCUG 53855 = CIP 109422 =

CSUR P26 = DSM 23039.

Brevibacterium mcbrellneri McBride et al. 1994


Type strain: # E2cr = ATCC 49030 = CCUG 37313 =

DSM 9583 = JCM 11682.

Brevibacterium sandarakinum Kämpfer et al. 2010


Type strain: 01-Je-003 = CCM 7649 = DSM 22082.

Catelliglobosispora koreensis (Lee et al. 2000) Ara et al. 2008 emend. Nouioui et al. 2018*

Type strain: LM 042 = CIP 107020 = DSM 44566 =

IMSNU 50729 = JCM 10976.

Catenulispora acidiphila Busti et al. 2006 emend.


Type strain: ID139908 = DSM 44928 = JCM 14897 =

NBRC 102108 = NRRL B-24433.

Cellulomonas carbonis Shi et al. 2012 emend.


Type strain: T-26 = CCTCC AB2010450 = CGMCC

1.10786 = DSM 26485 = KCTC 19824.

Cellulomonas cellasea (Kellerman et al. 1913)

Bergey et al. 1923 emend. Nouioui et al. 2018*

Type strain: ATCC 487 = CFBP 4260 = CIP 102222 =

DSM 20118 = JCM 9967 = LMG 16323 = NBRC 3753 = NCCB 29015 = VKM Ac-1136.

Cellulomonas fimi (McBeth and Scales 1913) Bergey


Type strain: ATCC 484 = CCUG 24087 = CFBP 4254

= CIP 102114 = DSM 20113 = HAMBI 93 = IFO

15513 = JCM 1341 = LMG 16345 = NBRC 15513

= NCAIM B.01386 = NCCB 29016 = NCTC 7547

= VKM Ac-1411.

Cellulomonas flavigena (Kellerman and McBeth

1912) Bergey et al. 1923 emend. Nouioui et al. 2018*


28996 = CFBP 4223 = CIP 82.10 = DSM 20109 =

JCM 1489 = LMG 16263 = NBRC 3754 = NCAIM

B.01383 = VKM Ac-1137.

Cellulomonas marina Zhang et al. 2013 emend.


Type strain: FXJ8.089 = CGMCC 4.6945 = DSM

24960.

Cellulomonas massiliensis Lagier et al. 2015 emend.


Type strain: JC225 = CSUR P160 = DSM 25695.

Clavibacter michiganensis corrig. (Smith 1910)

Davis et al. 1984 emend. Nouioui et al. 2018*

Type strain: CFBP 2352 = CIP 104846 = DSM 46364

= ICMP 2550 = JCM 9665 = LMG 7333 = NCPPB

2979 = VKM Ac-1403.

Cnuibacter physcomitrellae Zhou et al. 2016 emend.


Type strain: XA = CGMCC 1.15041 = DSM 29843.

Collinsella intestinalis Kageyama and Benno 2000


Type strain: RCA 56-68 = CCUG 45296 = CIP

106914 = DSM 13280 = JCM 10643.

Collinsella stercoris Kageyama and Benno 2000


Type strain: RCA 55-54 = CCUG 45295 = CIP

106913 = DSM 13279 = JCM 10641.

Compostimonas suwonensis Kim et al. 2012 emend.


Type strain: SMC 46 = DSM 25625 = KACC 13354 =

NBRC 106304.

Conexibacter woesei Monciardini et al. 2003 emend.

Nouioui et al. 2018* Type strain: ID131577 = DSM 14684 = JCM 11494 =

S23

NBRC 100937.

Corynebacterium accolens Neubauer et al. 1991


Type strain: CNCTC Th 1/57 = ATCC 49725 =

CCUG 28779 = CIP 104783 = DSM 44278 = JCM

8331.

Corynebacterium afermentans Riegel et al. 1993


Type strain: LCDC 88199 = ATCC 51403 = CCUG

32103 = CIP 103499 = DSM 44280 = JCM 10390.

Corynebacterium ammoniagenes (Cooke and Keith

1927) Collins 1987 emend. Nouioui et al. 2018*


101283 = DSM 20306 = JCM 1305 = NBRC 12612

= NCCB 60030 = NCIB 8143 = NCIMB 8143 =

VKM B-672.

Corynebacterium appendicis Yassin et al. 2002


Type strain: CCUG 48298 = DSM 44531 = IMMIB

R-3491 = JCM 11765 = NRRL B-24151.

Corynebacterium aquilae Fernández-Garayzábal et


Type strain: S-613 = CCUG 46511 = CECT 5993 =

DSM 44791 = JCM 12268.

Corynebacterium argentoratense Riegel et al. 1995



104296 = DSM 44202 = IBS B10697 = JCM

10392.

Corynebacterium atypicum Hall et al. 2003 emend.



DSM 44849 = JCM 12368.

Corynebacterium auriscanis Collins et al. 2000


Type strain: M598/96/1 = CCUG 39938 = CIP

106629 = DSM 44609 = JCM 12369.

Corynebacterium callunae (Lee and Good 1963)

Yamada and Komagata 1972 emend. Nouioui et al. 2018*


104277 = DSM 20147 = HAMBI 2053 = IFO

15359 = JCM 9489 = NBRC 15359.

Corynebacterium camporealensis Fernández-

Garayzábal et al. 1998 emend. Nouioui et al. 2018*

Type strain: CRS-51 = ATCC BAA-77 = CCUG

39412 = CECT 4897 = CIP 105508 = DSM 44610

= JCM 11664.

Corynebacterium capitovis Collins et al. 2001 emend.


Type strain: S108/98/2 = CCUG 39779 = CIP 106739

= DSM 44611 = JCM 12101.

Corynebacterium casei Brennan et al. 2001 emend.


Type strain: DPC 5298 = CIP 107182 = DSM 44701 =

JCM 12072 = LMG S-19264 = NCIMB 30130.

Corynebacterium caspium Collins et al. 2004 emend.


Type strain: M/106/00/5 = CCUG 44566 = CIP

107965 = DSM 44850 = JCM 13387.

Corynebacterium ciconiae Fernández-Garayzábal et


Type strain: BS13 = CCUG 47525 = CECT 5779 =

DSM 44920 = JCM 13388.

Corynebacterium cystitidis Yanagawa and Honda



103424 = DSM 20524 = JCM 3715 = NBRC 15284

= NCTC 11863.

Corynebacterium deserti Zhou et al. 2012 emend.


Type strain: GIMN1.010 = CCTCC AB 2010341 =

DSM 45689 = NRRL B-59552.

Corynebacterium diphtheriae (Kruse 1886) Lehmann

and Neumann 1896 emend. Nouioui et al. 2018*


44123 = NCTC 11397.

Corynebacterium doosanense Lee et al. 2009 emend.


Type strain: CAU 212 = CCUG 57284 = DSM 45436

= KCTC 19568.

Corynebacterium efficiens Fudou et al. 2002 emend.


Type strain: YS-314 = AJ 12310 = CCUG 47130 =

CCUG 48037 = DSM 44549 = JCM 11189 =

NBRC 100395.

Corynebacterium epidermidicanis Frischmann et al. 2012 emend. Nouioui et al. 2018*

S24

Type strain: 410 = CCUG 60915 = DSM 45586 =

LMG 26322.

Corynebacterium falsenii Sjödénet al. 1998 emend.


Type strain: Y13024 = CCUG 33651 = CIP 105466 =

DSM 44353 = JCM 11949.

Corynebacterium flavescens Barksdale et al. 1979


Type strain: OJ 8 = ATCC 10340 = CCUG 28791 =

CIP 69.5 = DSM 20296 = IFO 14136 = JCM 1317

= LMG 4046 = NBRC 14136 = NCCB 42012 =

NCIB 8707 = NCIMB 8707 = VKM Ac-1956.

Corynebacterium frankenforstense Wiertz et al. 2013


Type strain: ST18 = CCUG 63371 = DSM 45800.

Corynebacterium freiburgense Funke et al. 2009


Type strain: 1045 = CCUG 56874 = DSM 45254.

Corynebacterium glucuronolyticum Funke et al. 1995 emend. Nouioui et al. 2018*

Type strain: 6 = ATCC 51860 = CCUG 35055 = CIP

104577 = DMMZ 838 = DSM 44120 = JCM 11612

= LMG 19047.

Corynebacterium glutamicum (Kinoshita et al. 1958)

Abe et al. 1967 emend. Nouioui et al. 2018*


82.08 = DSM 20300 = HAMBI 2052 = IFO 12168

= JCM 1318 = LMG 3730 = NBRC 12168 = NRRL

B-2784.

Corynebacterium halotolerans Chen et al. 2004



JCM 12676 = YIM 70093.

Corynebacterium humireducens Wu et al. 2011


Type strain: MFC-5 = CGMCC 2452 = DSM 45392 =

NBRC 106098.

Corynebacterium imitans Funke et al. 1997 emend.



105130 = DSM 44264 = JCM 10386 = NBRC

100416 = NBRC 16163 = NCTC 13015.

Corynebacterium jeikeium Jackman et al. 1988 emend. Nouioui et al. 2018*


103337 = DSM 46361 = DSM 7171 = JCM 9384 =

NCTC 11913.

Corynebacterium kroppenstedtii Collins et al. 1998



44385 = JCM 11950.

Corynebacterium kutscheri (Migula 1900) Bergeyet



103423 = DSM 20755 = JCM 9385 = NBRC 15288

= NCTC 11138

Corynebacterium lactis Wiertz et al. 2013 emend.


Type strain: RW2-5 = CCUG 63372 = DSM 45799.

Corynebacterium lubricantis Kämpfer et al. 2009


Type strain: KSS-3Se = CCM 7546 = CCUG 56567 =

DSM 45231 = JCM 16607.

Corynebacterium marinum Du et al. 2010 emend.


Type strain: 7015 = D7015 = CGMCC 1.6998 = DSM

44953 = NRRL B-24779.

Corynebacterium massiliense Merhej et al. 2009



CSUR P19 = DSM 45435.

Corynebacterium mastitidis Fernandez-Garayzabal et al. 1997 emend. Nouioui et al. 2018*

Type strain: S-8 = CCUG 38654 = CECT 4843 = CIP

105509 = DSM 44356 = IFO 16160 = JCM 12269

= LMG 19040 = NBRC 16160.

Corynebacterium matruchotii (Mendel 1919) Collins



46620 = CIP 81.82 = DSM 20635 = JCM 9386 =

NBRC 15360 = NCTC 10254.

Corynebacterium minutissimum (ex Sarkany et al.

1962) Collins and Jones 1983 emend. Nouioui et al. 2018*

Type strain: ATCC 23348 = CCUG 541 = CIP 100652

= DSM 20651 = JCM 9387 = NBRC 15361 =

NCTC 10288.

Corynebacterium mooreparkense Brennan et al.

S25


Type strain: DPC 5310 = CIP 107183 = JCM 12073 =

LMG S-19265 = NCIMB 30131.

Corynebacterium mustelae Funke et al. 2010 emend.


Type strain: 3105 = CCUG 57279 = DSM 45274.

Corynebacterium mycetoides (ex Castellani 1942)

Collins 1983 emend. Nouioui et al. 2018*


55.51 = DSM 20632 = JCM 9388 = NBRC 15289

= NCTC 9864.

Corynebacterium nigricans Shukla et al. 2004


Type strain: CN-1 = ATCC 700975 = CCUG 48176 =

CIP 107346 = DSM 44827 = JCM 12684.

Corynebacterium nuruki Shin et al. 2011 emend.


Type strain: S6-4 = DSM 45695 = JCM 17162 =

KACC 15032.

C orynebacterium pseudodiphtheriticum Lehmann



103420 = DSM 44287 = JCM 11665 = NBRC

15362 = NCTC 11136.

Corynebacterium pseudotuberculosis (Buchanan

1911) Eberson 1918 emend. Nouioui et al. 2018*


102968 = DSM 20689 = JCM 9389 = NBRC 15363

= NCTC 3450.

Corynebacterium renale (Migula 1900) Ernst 1906



103421 = DSM 20688 = HAMBI 2321 = JCM

9391 = NBRC 15290 = NCTC 7448.

Corynebacterium resistens Otsuka et al. 2005 emend.


Type strain: SICGH 158 = CCUG 50093 = DSM

45100 = GTC 2026 = JCM 12819.

Corynebacterium singulare Riegel et al. 1997 emend.


Type strain: IBS B52218 = CCUG 37330 = CIP

105491 = DSM 44357 = JCM 10385 = NBRC

16162.

Corynebacterium sphenisci Goyache et al. 2003


Type strain: CCUG 46398 = CECT 5990 = DSM

44792 = JCM 12270.

Corynebacterium spheniscorum Goyache et al. 2003


Type strain: PG 39 = CCUG 45512 = CECT 5986 =

DSM 44757 = JCM 12271.

Corynebacterium sputi Yassin and Siering 2008


Type strain: IMMIB L-999 = CCUG 55795 = DSM

45148.

Corynebacterium striatum (Chester 1901) Eberson


Type strain: ATCC 6940 = CCUG 27949 = CIP 81.15

= DSM 20668 = JCM 9390 = NBRC 15291 =

NCTC 764.

Corynebacterium testudinoris Collins et al. 2001


Type strain: M935/96/4 = CCUG 41823 = CIP

106763 = DSM 44614 = JCM 12108.

Corynebacterium timonense Merhej et al. 2009



CSUR P20 = DSM 45434.

Corynebacterium ulceribovis Yassin 2009 emend.



45146.

Corynebacterium urealyticum Pitcher et al. 1992



103524 = DSM 7109 = JCM 10395 = LMG 19041

= NCTC 12011.

Corynebacterium ureicelerivorans Yassin 2007


Type strain: IMMIB RIV-2301 = CCUG 53377 =

DSM 45051 = JCM 15295.

Corynebacterium uterequi Hoyles et al. 2013 emend.


Type strain: VM 2298 = CCUG 61235 = DSM 45634.

Corynebacterium xerosis (Lehmann and Neumann

1896) Lehmann and Neumann 1899 emend.

Nouioui et al. 2018* Type strain: ATCC 373 = CCUG 27544 = CIP 100653

S26

= DSM 20743 = JCM 1971 = NBRC 16721 =

NCTC 11861.

Cryobacterium luteum Liu et al. 2012 emend.


Type strain: Hh15 = CGMCC 1.11210 = DSM 26476

= NBRC 107880.

Cryobacterium psychrotolerans Zhang et al. 2007


Type strain: 0549 = CGMCC 1.5382 = DSM 21575 =

JCM 13925.

Cryptosporangium arvum Tamura et al. 1998 emend.


Type strain: YU 629-21 = DSM 44712 = JCM 10424

= NBRC 15965.

Cryptosporangium aurantiacum Tamura and Hatano


Type strain: 71-C38 = AS 4.1052 = DSM 46144 =

IMET 9261 = JCM 3241 = KCC A-0241 = KCTC

9529 = NBRC 13967 = NCIMB 12649 = NRRL B-

16698.

Cutibacterium acnes (Gilchrist 1900) Scholz and

Kilian 2016 emend. Nouioui et al. 2018*

Type strain: ATCC 6919 = CCUG 1794 = CIP 53.117

= DSM 1897 = JCM 6425 = LMG 16711 = NBRC

107605 = NCTC 737 = NRRL B-4224 = VKM Ac-

1450.

Cutibacterium avidum (Eggerth 1935) Scholz and



103261 = DSM 4901 = NBRC 15671 = NCTC

11864.

Cutibacterium granulosum (Prévot 1938) Scholz and



103262 = DSM 20700 = LMG 16726 = NCTC

11865.

Dactylosporangium aurantiacum Thiemann et al. 1967 emend. Nouioui et al. 2018*


= NBRC 12592 = NRRL B-8018 = NRRL B-8111

= VKM Ac-654.

Demequina oxidasica Ue et al. 2011 emend. Nouioui

et al. 2018*

Type strain: YM05-1041 = DSM 27405 = KCTC 19746 = MBIC 08346 = NBRC 106264.

Demequina salsinemoris Matsumoto et al. 2010


Type strain: KV-810 = DSM 22060 = NBRC 105323.

Demetria terragena Groth et al. 1997 emend.


Type strain: 2002-46 = HKI 0089 = CIP 105501 =

DSM 11295 = JCM 11480 = NBRC 16164.

Dermabacter hominis corrig. Jones and Collins 1989


Type strain: S69 = ATCC 49369 = CCUG 32998 =

CIP 105144 = DSM 7083 = JCM 7448 = NCFB

2769 = NCIMB 13131.

Dermatophilus congolensis (van Saceghem 1915)

Gordon 1964 emend. Nouioui et al. 2018*

Type strain: ATCC 14637 = CCUG 47448 = DSM

44180 = JCM 8106 = NCTC 13039 = NRRL B-

2350.

Diaminobutyricimonas aerilata Jang et al. 2013


Type strain: 6408J-67 = DSM 27393 = KACC 15518

= NBRC 108726.

Dietzia alimentaria Kim et al. 2011 emend. Nouioui

et al. 2018*

Type strain: 72 = DSM 45698 = JCM 16360 = KACC

21126.

Dietzia cinnamea Yassin et al. 2006 emend. Nouioui

et al. 2018*

Type strain: IMMIB RIV-399 = CCUG 50875 = DSM

44904 = JCM 13663 = NBRC 102147.

Dietzia kunjamensis Mayilraj et al. 2006 emend.


Type strain: K30-10 = DSM 44907 = JCM 13325 =

MTCC 7007.

Dietzia maris (Nesterenko et al. 1982) Rainey et al.


Type strain: IMV 195 = AUCNM A-593 = ATCC

35013 = DSM 43672 = IMET 7760.

Eggerthella lenta (Eggerth 1935) Wade et al. 1999


Type strain: NCAIM B.01418 = ATCC 25559 =

CCUG 17323 A = CIP 106637 = DSM 2243 = JCM

9979 = NCTC 11813.

Falcivibrio vaginalis Hammann et al. 1984 emend.

S27


Type strain: V125 = ATCC 43063 = CCUG 24716 =

DSM 2711 = LMG 7856 = NCTC 11820.

Ferrithrix thermotolerans Johnson et al. 2009


Type strain: Y005 = ATCC BAA-1645 = DSM 19514.

Gardnerella vaginalis (Gardner and Dukes 1955)

Greenwood and Pickett 1980 emend. Vaneechoutte

et al. 2019

Type strain: Dukes 594 = ATCC 14018 = DSM 4944

= CCUG 3717 = JCM 11026 = LMG 7832 = NCTC

10915 = NCTC 10287.

Ref.: IJSEM, 2019, 69: 679–687.

Gardnerella vaginalis (Gardner and Dukes 1955)

Greenwood and Pickett 1980 emend. Nouioui et al.

2018*

Type strain: 594 = ATCC 14018 = CCUG 3717 = CIP

70.74 = DSM 4944 = JCM 11026 = LMG 7832 =

NCTC 10287 = NCTC 10915.

Georgenia soli Kämpfer et al. 2010 emend. Nouioui

et al. 2018*

Type strain: CC-NMPT-T3 = CCM 7658 = DSM

21838.

Glaciibacter superstes Katayama et al. 2009 emend.


Type strain: AHU 1791 = DSM 21135 = NBRC

104264.

Glutamicibacter arilaitensis (Irlinger et al. 2005)

Busse 2016 emend. Nouioui et al. 2018*

Type strain: Re117 = CIP 108037 = DSM 16368 =

IAM 15318 = JCM 13566.

Glutamicibacter mysorens (Nand and Rao 1972)

Busse 2016 emend. Nouioui et al. 2018*


12798 = JCM 11565 = LMG 16219 = NBRC

103060 = NCIB 10583 = NCIMB 10583.

Glycomyces arizonensis Labeda and Kroppenstedt


Type strain: DSM 44726 = JCM 14911 = NBRC

103886 = NRLL B-16153 = NRRL B-16153.

Glycomyces sambucus Gu et al. 2007 emend.


Type strain: E71 = CGMCC 4.3147 = DSM 45047 =

JCM 15472.

Glycomyces tenuis Evtushenko et al. 1991 emend.


Type strain: ATCC 49849 = DSM 44171 = INA n-

5888 = JCM 9087 = NBRC 15904 = NRRL B-

16895 = VKM Ac-1250.

Goodfellowiella coeruleoviolacea (Preobrazhenskaya

et al. 1987) Labeda et al. 2008 emend. Nouioui et

al. 2018*

Type strain: DSM 43935 = INA 3564 = JCM 9110 =

NBRC 14988 = NRRL B-24058 = VKM Ac-1083.

Gordonia amarae corrig. (Lechevalier and

Lechevalier 1974) Klatte et al. 1994 emend.


Type strain: Se 6 = ATCC 27808 = CIP 104501 =

DSM 43376 = DSM 43392 = DSM 43587 =

HAMBI 2282 = JCM 3171 = NBRC 15530 =

NCIMB 11222 = NRRL B-16281 = NRRL B-8176

= VKM Ac-801.

Gordonia amicalis Kim et al. 2000 emend. Nouioui et al. 2018*

Type strain: IEGM = CCUG 48822 = DSM 44461 =

JCM 11271 = KCTC 9940 = NBRC 100051.

Gordonia araii Kageyama et al. 2006 emend.


Type strain: DSM 44811 = IFM 10211 = JCM 12131

= NBRC 100433.

Gordonia bronchialis corrig. (Tsukamura 1971)


2018*

Type strain: Tsukamura 3410 = ATCC 25592 = CCUG

20989 = CCUG 34956 = CIP 100847 = DSM

43247 = JCM 3198 = JCM 3231 = LMG 5355 =

NBRC 16047 = NCTC 10667 = VKM Ac-956.

Gordonia desulfuricans Kim et al. 1999 emend.


Type strain: 213E = DSM 44462 = JCM 11762 =

NBRC 100010 = NCIMB 40816.

Gordonia effusa Kageyama et al. 2006 emend.


Type strain: DSM 44810 = IFM 10200 = JCM 12130

= NBRC 100432.

Gordonia hydrophobica corrig. Bendinger et al. 1995


Type strain: 1610/1b = ATCC 700089 = CCUG 38497

= CIP 104672 = DSM 44015 = IFO 16057 = JCM 10086 = NBRC 16057.

S28

Gordonia lacunae Le Roes et al. 2009 emend.


Type strain: BS2 = DSM 45085 = JCM 14873 =

NRRL B-24551.

Gordonia malaquae Yassin et al. 2007 emend.


Type strain: CCUG 53555 = DSM 45064 = IMMIB

WWCC-22 = JCM 14874.

Gordonia neofelifaecis Liu et al. 2011 emend.


Type strain: AD-6 = CCTCC AB-209144 = DSM

45646 = NRRL B-59395.

Gordonia polyisoprenivorans Lions et al. 1999


Type strain: Kd2 = ATCC BAA-14 = CIP 106350 =

DSM 44302 = JCM 10675 = NBRC 16320.

Gordonia rubripertincta corrig. (Hefferan 1904)


2018*

Type strain: N4 = ATCC 14352 = CCUG 34957 = CIP

104661 = DSM 43197 = JCM 3204 = LMG 5367 =

NBRC 101908 = NCIB 9664 = NCIMB 9664 =

VKM Ac-1016.

Gordonia shandongensis Luo et al. 2007 emend.


Type strain: SD29 = CGMCC 4.3492 = DSM 45094 =

JCM 13907.

Gordonia terrae corrig. (Tsukamura 1971)


2018*


104295 = DSM 43249 = JCM 3206 = JCM 3229 =

LMG 5369 = NBRC 100016 = NCTC 10669 =

NRRL B-16283 = VKM Ac-1023.

Gordonia westfalica Linos et al. 2002 emend.


Type strain: Kb1/Kb2 = Kb2 = CCUG 46924 = DSM

44215 = JCM 11757 = NRRL B-24152.

Haloglycomyces albus Guan et al. 2009 emend.


Type strain: DSM 45210 = JCM 16899 = KCTC

19481 = YIM 92370.

Herbiconiux ginseng (Qiu et al. 2007) Behrendt et al. 2011 emend. Nouioui et al. 2018*

Type strain: wged11 = CGMCC 4.3491 = DSM 19088

= JCM 13908 = NBRC 104580.

Herbiconiux solani Behrendt et al. 2011 emend.


Type strain: K134/01 = DSM 19813 = LMG 24387 =

NBRC 106740.

Herbidospora cretacea Kudo et al. 1993 emend.


Type strain: K-319 = ATCC 51904 = DSM 44071 =

JCM 8553 = NBRC 15474 = VKM Ac-1997

Herbidospora sakaeratensis Boondaenger et al. 2011


Type strain: DMKUA 205 = BCC 11662 = DSM

45652 = NBRC 102641.

Ilumatobacter nonamiensis corrig. Matsumoto et al. 2013 emend. Nouioui et al. 2018*

Type strain: YM16-303 = KCTC 29139 = NBRC

29153.

Intrasporangium calvum Kalakoutskii et al. 1967



= NBRC 12989 = NRRL B-3866 = VKM Ac-701.

Intrasporangium oryzae (Kageyama et al. 2007)

Yang et al. 2012 emend. Nouioui et al. 2018*

Type strain: KV-657 = DSM 22331 = JCM 15924 =

NBRC 101802 = NRRL B-24470.

Isoptericola jiangsuensis Wu et al. 2010 emend.


Type strain: CLG = CCTCC AB208287 = DSM

21863.

Janibacter hoylei Shivaji et al. 2009 emend. Nouioui

et al. 2018*

Type strain: PVAS-1 = CCUG 56714 = DSM 21601 =

MTCC 8307.

Janibacter indicus Zhang et al. 2014 emend. Nouioui

et al. 2018*

Type strain: 0704P10-1 = CGMCC 1.12511 = DSM

29878 = LMG 27493.

Jatrophihabitans endophyticus Madhaiyan et al.


Type strain: S9-650 = DSM 45627 = KACC 16232.

Jiangella muralis Kämpfer et al. 2011 emend. Nouioui et al. 2018*

S29

Type strain: 15-Je-017 = CCM 7680 = DSM 45357.

Jonesia denitrificans (Prévot 1961) Rocourt et al.



55.134 = DSM 20603 = JCM 11481 = NBRC

15587 = NCTC 10816

Kibdelosporangium phytohabitans Xing et al. 2012


Type strain: CCTCC AA 2010001 = KCTC 19775 =

KLBMP 1111.

Kineococcus radiotolerans Phillips et al. 2002


Type strain: SRS30216 = ATCC BAA-149 = DSM

14245 = JCM 12686 = NBRC 101839.

Kineococcus xinjiangensis Li et al. 2009 emend.


Type strain: S2-20 = CCTCC AB 207179 = DSM

22857 = JCM 16219 = KCTC 19474.

Kitasatospora azatica corrig. (Nakagaito et al. 1993)



= NBRC 13803.

Kitasatospora cheerisanensis Chung et al. 1999


Type strain: YC75 = KCTC 2395.

Kitasatospora mediocidica corrig. Labeda 1988



= NBRC 14789 = NRRL B-16109.

Kitasatospora phosalacinea corrig. Takahashi et al. 1985 emend. Nouioui et al. 2018*

Type strain: KM-6054 = ATCC 33774 = DSM 43861

= JCM 3304 = NBRC 14216 = NRRL B-16185 =

VKM Ac-900.

Kitasatospora setae corrig. Ōmura et al. 1983 emend.


Type strain: KM-6054 = ATCC 33774 = DSM 43861

= JCM 3304 = NBRC 14216 = NRRL B-16185 =

VKM Ac-900.

Knoellia aerolata Weon et al. 2007 emend. Nouioui

et al. 2018*

Type strain: 5317S-21 = DSM 18566 = JCM 16377 =

KACC 20583.

Kocuria flava Zhou et al. 2008 emend. Nouioui et al. 2018*

Type strain: HO-9041 = CCTCC AB 206106 = DSM

22142 = JCM 15621 = KCTC 19306.

Kocuria indica Dastager et al. 2014 emend. Nouioui

et al. 2018*


Kocuria turfanensis Zhou et al. 2008 emend. Nouioui

et al. 2018*

Type strain: HO-9042 = CCTCC AB 206107 = DSM

22143 = JCM 15622 = KCTC 19307.

Kribbella catacumbae Urzi et al. 2008 emend.


Type strain: BC631 = DSM 19601 = JCM 14968.

Kutzneria buriramensis Suriyachadkun et al. 2013


Type strain: A-T 1846 = BCC 29373 = DSM 45791 =

NBRC 107931.

Kytococcus aerolatus Kämpfer et al. 2009 emend.


Type strain: 02-St-019/1 = CCM 7639 = CCUG

57578 = DSM 22179.

Kytococcus sedentarius (ZoBell and Upham 1944)

Stackebrandt et al. 1995 emend. Nouioui et al. 2018*


33030 = CIP 81.72 = DSM 20547 = JCM 11482 =

LMG 14228 = NBRC 15357 = NCTC 11040 =

VKM B-1316.

Leifsonia kafniensis Pindi et al. 2009 emend.


Type strain: KFC-22 = JCM 17021 = LMG 24362 =

NCCB 100216.

Leifsonia psychrotolerans Ganzert et al. 2011 emend.


Type strain: LI1 = DSM 22824 = NCCB 100313.

Leifsonia rubra Reddy et al. 2003 emend. Nouioui et

al. 2018*

Type strain: CMS 76r = CIP 107783 = DSM 15304 =

DSM 21193 = JCM 12471 = MTCC 4210.

Lentzea albida Labeda et al. 2001 emend. Nouioui et al. 2018*

Type strain: DSM 44437 = JCM 10670 = NBRC 16102 = NRRL B-24073.

S30

Lentzea californiensis Labeda et al. 2001 emend.


Type strain: DSM 43393 = IMRU 550 = JCM 11305

= NRLL B-16137 = NRRL B-16137.

Lentzea kentuckyensis Labeda et al. 2007 emend.


Type strain: LDDC 2876-05 = DSM 44909 = JCM

14913 = NRRL B-24416.

Lentzea waywayandensis (Labeda and Lyons 1989)

Labeda et al. 2001 emend. Nouioui et al. 2018*


= LL-37Z-15 = NBRC 14970 = NRRL B-16159 =

VKM Ac-1970.

Leucobacter chironomi Halpern et al. 2009 emend.


Type strain: MM2LB = DSM 19883 = JCM 17022 =

LMG 24399.

Leucobacter chromiiresistens Sturm et al. 2011


Type strain: JG 31 = CCOS 200 = DSM 22788.

Leucobacter salsicius Yun et al. 2011 emend.


Type strain: M1-8t = JCM 16362 = KACC 21127.

Luteipulveratus halotolerans Juboi et al. 2015


Type strain: C296001 = ATCC TSD-4 = JCM 30660.

Marmoricola scoriae Lee and Lee 2010 emend.


Type strain: Sco-D01 = DSM 22127 = KCTC 19597.

Microbacterium agarici Young et al. 2010 emend.


Type strain: CC-SBCK-209 = CCM 7686 = DSM

21798.

Microbacterium enclense Mawlankar et al. 2015


Type strain: NIO-1002 = CCTCC AB 2011120 =

DSM 25125 = NCIM 5454.

Microbacterium foliorum Behrendt et al. 2001


Type strain: P 333/02 = CIP 107137 = DSM 12966 =

JCM 11569 = LMG 19580 = NBRC 103072.

Microbacterium gubbeenense Brennan et al. 2001


Type strain: DPC 5286 = DSM 15944 = DSM 24532

= JCM 12075 = LMG S-19263 = NBRC 103073 =

NCIMB 30129.

Microbacterium humi Young et al. 2010 emend.


Type strain: CC-012309 = CCM 7687 = DSM 21799.

Microbacterium hydrocarbonoxydans Schippers et


Type strain: BNP48 = DSM 16089 = JCM 14340 =

NBRC 103074 = NCIMB 14002.

Microbacterium indicum Shivaji et al. 2007 emend.


Type strain: BBH6 = DSM 19969 = IAM 15355 =

JCM 21800 = LMG 23459.

Microbacterium luticocti Vaz-Moreira et al. 2008


Type strain: SC-087B = CCUG 54537 = DSM 19459

= JCM 15576.

Microbacterium mangrove Lee et al. 2014 emend.


Type strain: MCCC 1K00251 = DSM 28240 = MUSC

115 = NBRC 110089.

Microbacterium oleivorans Schippers et al. 2005


Type strain: BAS69 = DSM 16091 = JCM 14341 =

NBRC 103075 = NCIMB 14003.

Microbacterium resistens (Funke et al. 1998)

Behrendt et al. 2001 emend. Nouioui et al. 2018*

Type strain: DMMZ 1710 = CCUG 38312 = DSM

11986 = JCM 11686 = NBRC 103078.

Microbacterium trichothecenolyticum (Yokota et al. 1993) Takeuchi and Hatano 1998 emend. Nouioui

et al. 2018*

Type strain: ATCC 51475 = CIP 103817 = DSM 8608

= JCM 1358 = LMG 16696 = NBRC 15077 =

VKM Ac-1948.

Microbispora rosea Nonomura and Ohara 1957



= NBRC 14044 = NRRL B-2632 = VKM Ac-634.

Micrococcus luteus (Schroeter 1872) Cohn 1872

emend. Huang et al. 2019 Type strain: ATCC 4698 = BCRC 80739 = CCM 169

S31

= CCUG 5858 = CGMCC 1.2299 = CECT 5053 =

CIP A270 = DSM 20030 = JCM 1464 = LMG 4050

= NCIMB 9278 = NCTC 2665.

Ref.: IJSEM, 2019, 69: 3512–3518.

Micrococcus luteus (Schroeter 1872) Cohn 1872


Type strain: ATCC 4698 = CCM 169 = CCUG 5858 =

CIP A270 = DSM 20030 = HAMBI 1399 =

HAMBI 26 = IEGM 391 = JCM 1464 = LMG 4050

= NBRC 3333 = NCCB 78001 = NCTC 2665 =

NRRL B-287 = VKM B-1314.

Micrococcus lylae Kloos et al. 1974 emend. Nouioui

et al. 2018*


81.70 = DSM 20315 = IEGM 392 = JCM 11572 =

LMG 14218 = NBRC 15355 = NCTC 11037 =

VKM B-1815.

Micrococcus terreus Zhang et al. 2010 emend.


Type strain: V3M1 = CGMCC 1.7054 = DSM 28110

= NBRC 104258.

Microlunatus soli Kämpfer et al. 2010 emend.


Type strain: CC-012602 = CCM 7685 = DSM 21800.

Micromonospora avicenniae Li et al. 2013 emend.


Type strain: 268506 = 2685R06 = CCTCC AA

2012010 = DSM 45758.

Micromonospora rosaria (ex Wagman et al. 1972)

Horan and Brodsky 1986 emend. Nouioui et al.

2018*

Type strain: 67694 = ATCC 29337 = DSM 803 =

NRRL 3718 = SCC 957.

Micromonospora wenchangensis Ren et al. 2013


Type strain: 2602GPT1-05 = CCTCC AA 2012002 =

DSM 45709.

Microtetraspora fusca Thiemann et al. 1968 emend.



= NBRC 13915 = NRRL B-3628 = VKM Ac-662.

Microtetraspora glauca Thiemann et al. 1968 emend.


Type strain: ATCC 23057 = DSM 43311 = JCM 3300 = NBRC 14761 = NRRL B-3735 = VKM Ac-663.

Microtetraspora malaysiensis Nakajima et al. 2004


Type strain: H47-7 = DSM 44579 = JCM 11278 =

NBRC 100735.

Microtetraspora niveoalba Nonomura and Ohara

1971emend. Nouioui et al. 2018*


= NBRC 15239.

Mobiluncus curtisii Spiegel and Roberts 1984 emend.


Type strain: BV345-16 = ATCC 35241 = CCUG

21018 = DSM 23059 = NCTC 11656.

Mobiluncus mulieris Spiegel and Roberts 1984


Type strain: SV17J = ATCC 35243 = CCUG 20071 =

DSM 25311 = LMG 7787 = NCTC 11658.

Modestobacter marinus Xiao et al. 2011 emend.

Montero-Calasanzet al. 2019

Type strain: 42H12-1 = DSM 45201 = CGMCC

4.5581

Ref.: IJSEM, 2019, 69: 1537–1545.

Modestobacter multiseptatus Mevs et al. 2000

emend. Reddy et al. 2007 emend. Montero-

Calasanz et al. 2019

Type strain: AA-826 = CIP 106529 = DSM 44406 =

JCM 12207. Ref.: IJSEM, 2019, 69: 1537–1545.

Modestobacter roseus Qin et al. 2013 emend.

Montero-Calasanz et al. 2019

Type strain: KLBMP 1279 = KCTC 19887 = NBRC

108673 = DSM 45764.

Ref.: IJSEM, 2019, 69: 1537–1545.

Modestobacter versicolor Reddy et al. 2007 emend.

Montero-Calasanz et al. 2019

Type strain: CP153-2 = ATCC BAA-1040 = DSM

16678.

Ref.: IJSEM, 2019, 69: 1537–1545.

Motilibacter peucedani Lee 2012 emend. Nouioui et

al. 2018*

Type strain: RP-AC37 = DSM 45328 = KCTC 19630.

Murinocardiopsis flavida Kämpfer et al. 2010

emend. Nouioui et al. 2018* Type strain: 14-Be-013 = CCM 7612 = DSM 45312.

S32

Mycetocola saprophilus Tsukamoto et al. 2001


Type strain: CM-01 = DSM 15178 = JCM 11655 =

MAFF 211324 = NBRC 16274 = NRRL B-24119.

Mycobacterium algericum Sahraoui et al. 2011


Type strain: Bejaia = CIP 110121 = DSM 45454 =

TBE 500028/10.

Mycobacterium alsense Tortoli et al. 2016 emend.


Type strain: TB 1906 = CCUG 56586 = DSM 45230.

Mycobacterium aromaticivorans Hennessee et al.


Type strain: JS19b1 = ATCC BAA-1378 = CIP

109274 = DSM 45407 = JCM 16368.

Mycobacterium arosiense Bang et al. 2008 emend.


Type strain: T1921 = ATCC BAA-1401 = DSM

45069.

Mycobacterium arupense Cloud et al. 2006 emend.


Type strain: AR30097 = ATCC BAA-1242 = DSM

44942.

Mycobacterium asiaticum Weiszfeiler et al. 1971



106809 = DSM 44297 = JCM 6409.

Mycobacterium aurum Tsukamura et al. 1966 emend.



104465 = DSM 43999 = HAMBI 2275 = JCM

6366 = LMG 19255 = NCTC 10437 = NRRL B-

4037.

Mycobacterium austroafricanum Tsukamura et al.


Type strain: SA12441 = ATCC 33464 = CCUG 37667

= CIP 105395 = DSM 44191 = E9789-SA12441 =

HAMBI 2271 = JCM 6369.

Mycobacterium boenickei Schinsky et al. 2004


Type strain: W5998 = ATCC 49935 = DSM 44677 =

JCM 15653.

Mycobacterium bohemicum Reischl et al. 1998


Type strain: CIP 105811 = DSM 44277 = JCM 12402

Mycobacterium bouchedurhonense Ben Salah et al. 2009 emend. Nouioui et al. 2018*


CSUR P34 = DSM 45439.

Mycobacterium branderi Koukila-Kähkölä et al. 1995 emend. Nouioui et al. 2018*

Type strain: 52157 = ATCC 51789 = CIP 104592 =

DSM 44624 = JCM 12687.

Mycobacterium celatum Butler et al. 1993 emend.


Type strain: CDC 90-0899 = ATCC 51131 = CCUG

39185 = CIP 106109 = DSM 44243 = JCM 12373.

Mycobacterium celeriflavum Shahraki et al. 2015


Type strain: AFPC-000207 = DSM 46765 = JCM

18439.

Mycobacterium chelonae corrig. Bergey et al. 1923



104535 = CM 6388 = DSM 43804 = JCM 6388 =

NCTC 946.

Mycobacterium chlorophenolicum (Apajalahti et al. 1986) Häggblom et al. 1994 emend. Nouioui et al.

2018*

Type strain: PCP-I = ATCC 49826 = CIP 104189 =

DSM 43826 = HAMBI 2278 = IEGM 559 = JCM

7439 = NBRC 15527 = NRRL B-16528.

Mycobacterium chubuense (ex Tsukamura 1973)

Tsukamura 1981 emend. Nouioui et al. 2018*

Type strain: 48013 = 5517 = ATCC 27278 = CCUG

37670 = CIP 106810 = DSM 44219 = JCM 16420

= JCM 6374 = NCTC 10819.

Mycobacterium colombiense Murcia et al. 2006


Type strain: 10B = CECT 3035 = CIP 108962 = DSM

45105 = JCM 16228.

Mycobacterium conceptionense Adékambi et al. 2006 emend. Nouioui et al. 2018*

Type strain: D16 = CCUG 50187 = CIP 108544 =

DSM 45102 = JCM 15299.

Mycobacterium confluentis Kirschner et al. 1992 emend. Nouioui et al. 2018*

S33

Type strain: 1389/90 = ATCC 49920 = CIP 105510 =

DSM 44017 = JCM 13671.

Mycobacterium conspicuum Springer et al. 1996



DSM 44136 = JCM 14738.

Mycobacterium cosmeticum Cooksey et al. 2004


Type strain: LTA-388 = ATCC BAA-878 = CIP

108170 = DSM 44829 = JCM 14739.

Mycobacterium doricum Tortoli et al. 2001 emend.


Type strain: Fi-13295 = CCUG 46352 = CIP 106867

= DSM 44339 = JCM 12405.

Mycobacterium engbaekii Tortoli et al. 2013 emend.


Type strain: ATCC 27353 = DSM 45694.

Mycobacterium europaeum Tortoli et al. 2011


Type strain: FI-95228 = CCUG 58464 = DSM 45397.

Mycobacterium fallax Lévy-Frébault et al. 1983



81.39 = DSM 44179 = JCM 6405.

Mycobacterium florentinum Tortoli et al. 2005


Type strain: F-I93171 = CCUG 50992 = CIP 108409

= DSM 44852 = JCM 14740.

Mycobacterium fortuitum da Costa Cruz et al. 1938



CIP 104534 = DSM 46621 = JCM 6387 = NBRC

13159 = NCTC 10394.

Mycobacterium fragae Ramos et al. 2013 emend.


Type strain: Fiocruz-INCQS/CMRVS P4051 =

HF8705 = DSM 4573.

Mycobacterium franklinii Nogueiraet al. 2015


Type strain: CV002 = ATCC BAA-2149 = DSM

45524.

Mycobacterium genavense Böttger et al. 1993 emend. Nouioui et al. 2018*

Type strain: 89-2289-M = ATCC 51234.

Mycobacterium gordonae Bojalil et al. 1962 emend.



21811 = CIP 104529 = DSM 44160 = JCM 6382 =

NCTC 10267.

Mycobacterium haemophilum Sompolinsky et al. 1978 emend. Nouioui et al. 2018*


105049 = DSM 44634 = JCM 15465 = NCTC

11185.

Mycobacterium hassiacum Schröder et al. 1997



DSM 44199 = JCM 12690.

Mycobacterium heidelbergense Haas et al. 1998



DSM 44471 = JCM 14842.

Mycobacterium hiberniae Kazda et al. 1993 emend.


Type strain: Hi 11 = ATCC 49874 = ATCC 9874 =

CIP 104537 = DSM 44241 = JCM 13571.

Mycobacterium houstonense Schinsky et al. 2004



JCM 15656.

Mycobacterium immunogenum Wilson et al. 2001


Type strain: BH29 = MC 779 = ATCC 700505 = CIP

106684 = DSM 45595.

Mycobacterium interjectum Springer et al. 1995


Type strain: 4185-92 = ATCC 51457 = CCUG 37514

= DSM 44064.

Mycobacterium intermedium Meier et al. 1993


Type strain: 1669/91 = ATCC 51848 = CCUG 37583

= CIP 104542 = DSM 44049 = JCM 13572.

Mycobacterium iranicum Shojaei et al. 2013 emend.


Type strain: M05 = CCUG 62053 = DSM 45541 =

JCM 17461.

S34

Mycobacterium kansasii Hauduroy 1955 emend.



44162 = JCM 6379 = NCTC 13024.

Mycobacterium koreense Kim et al. 2012 emend.


Type strain: 01-305 = DSM 45576 = KCTC 19819.

Mycobacterium kubicae Floyd et al. 2000 emend.


Type strain: ATCC 700732 = CDC 94-1078 = CIP

106428 = DSM 44627 = JCM 13573.

Mycobacterium kumamotonense Masaki et al. 2007


Type strain: CST 7247 = CCUG 51961 = DSM 45093

= GTC 2792 = JCM 13453.

Mycobacterium kyorinense Okazaki et al. 2009


Type strain: KUM 060204 = DSM 45166 = JCM

15038.

Mycobacterium lacus Turenne et al. 2002 emend.


Type strain: ATCC BAA-323 = DSM 44577 = JCM

15657 = NRCM 00-255.

Mycobacterium longobardum Tortoli et al. 2013


Type strain: FI-07034 = CCUG 58460 = DSM 45394.

Mycobacterium mageritense Domenech et al. 1997



CIP 104973 = DSM 44476 = JCM 12375.

Mycobacterium mantenii van Ingen et al. 2009


Type strain: 04-1474 = NLA000401474 = CIP 109863

= DSM 45255.

Mycobacterium marseillense Ben Salah et al. 2009


Type strain: 5356591 = CSUR P30 = CCUG 56325 =

CIP 109828 = DSM 45437.

Mycobacterium minnesotense Hannigan et al. 2013


Type strain: DL49 = DSM 45633 = JCM 17932 =

NCCB 100399.

Mycobacterium monacense Reischl et al. 2006


Type strain: B9-21-178 = CIP 109237 = DSM 44395

= JCM 15658.

Mycobacterium moriokaense Tsukamura et al. 1986


Type strain: 48504 = E11715 = ATCC 43059 = CCUG

37671 = CIP 105393 = DSM 44221 = JCM 6375 =

VKM Ac-1183.

Mycobacterium nebraskense Mohamed et al. 2004


Type strain: UNMC-MY 1349 = ATCC BAA-837 =

DSM 44803.

Mycobacterium neworleansense Schinsky et al. 2004



JCM 15659.

Mycobacterium noviomagense van Ingen et al. 2009


Type strain: NLA000500338 = CIP 109766 = DSM

45145 = JCM 16367.

Mycobacterium obuense (ex Tsukamura and Mizuno

1971) Tsukamura et al. 1981 emend. Nouioui et al. 2018*

Type strain: 4388 = 47001 = ATCC 27023 = CCUG

37669 = CIP 106803 = DSM 44075 = HAMBI

2272 = JCM 6372 = NCTC 10778.

Mycobacterium palustre Torkko et al. 2002 emend.


Type strain: E846 = ATCC BAA-377 = DSM 44572.

Mycobacterium paraense Fusco da Costa et al. 2015


Type strain: IEC26 = CCUG 66121 = DSM 46749.

Mycobacterium paraintracellulare Lee et al. 2016


Type strain: MOTT-64 = JCM 30622 = KCTC 29084.

Mycobacterium parascrofulaceum Turenne et al. 2004 emend. Nouioui et al. 2018*

Type strain: HSC-68 = ATCC BAA-614 = DSM

44648 = JCM 13015.

Mycobacterium paraseoulense Lee et al. 2010


Type strain: 31118 = DSM 45000 = JCM 16952 =

KCTC 19145

S35

Mycobacterium parmense Fanti et al. 2004 emend.


Type strain: MUP 1182 = CCUG 50998 = CIP 107385

= DSM 44553 = JCM 14742.

Mycobacterium peregrinum (ex Bojalil et al. 1962)

Kusunoki and Ezaki 1992 emend. Nouioui et al.

2018*


105382 = DSM 43271 = JCM 12142 = NCTC

10264.

Mycobacterium phlei Lehmann and Neumann 1899



105389 = DSM 43239 = JCM 5865 = JCM 6385 =

NCTC 8151 = NRRL B-14615 = VKM Ac-1291.

Mycobacterium pseudoshottsii Rhodes et al. 2005


Type strain: L15 = ATCC BAA-883 = DSM 45108 =

JCM 15466 = NCTC 13318.

Mycobacterium rhodesiae (ex Tsukamura et al. 1971)


Type strain: 5295 = 02002 = ATCC 27024 = CIP

106806 = DSM 44223 = JCM 6363 = NCTC

10779.

Mycobacterium riyadhense van Ingen et al. 2009



45176.

Mycobacterium rufum Hennessee et al. 2009 emend.


Type strain: JS14 = ATCC BAA-1377 = CIP 109273 =

DSM 45406 = JCM 16372.

Mycobacterium rutilum Hennessee et al. 2009


Type strain: czh-117 = ATCC BAA-1375 = CIP

109271 = DSM 45405 = JCM 16371.

Mycobacterium salmoniphilum (ex Ross 1960)

Whipps et al. 2007 emend. Nouioui et al. 2018*

Type strain: SC = ATCC 13758 = DSM 43276.

Mycobacterium saskatchewanense Turenne et al.


Type strain: 00-250 = ATCC BAA-544 = CIP 108114

= DSM 44616 = JCM 13016.

Mycobacterium scrofulaceum Prissick and Masson



105416 = DSM 43992 = JCM 6381 = NCTC

10803.

Mycobacterium senuense Mun et al. 2008 emend.


Type strain: 05-832 = DSM 44999 = JCM 16017 =

KCTC 1914 = KCTC 19147.

Mycobacterium septicum Schinsky et al. 2000


Type strain: W4964 = ATCC 700731 = CCUG 43574

= CIP 106642 = DSM 44393 = JCM 14743.

Mycobacterium setense Lamy et al. 2008 emend.


Type strain: ABO-M06 = CIP 109395 = DSM 45070

= JCM 15660.

Mycobacterium sherrisii van Ingen et al. 2011


Type strain: 4773 = ATCC BAA-832 = DSM 45441.

Mycobacterium shimoidei (ex Tsukamura et al. 1975)


Type strain: E4796 = JATCC 27962 = CCUG 37517 =

DSM 44152 = CM 12376.

Mycobacterium shinjukuense Saito et al. 2011


Type strain: CCUG 53584 = DSM 45663 = GTC 2738

= JCM 14233.

Mycobacterium simiae Karassova et al. 1965 emend.



42427 = CIP 104531 = DSM 44165 = JCM 12377.

Mycobacterium smegmatis (Trevisan 1889) Lehmann



21815 = CIP 104444 = DSM 43756 = JCM 5866 =

JCM 6386 = NCTC 8159 = NRRL B-14616 =

VKM Ac-1239.

Mycobacterium szulgai Marks et al. 1972 emend.



104532 = DSM 44166 = JCM 6383 = NCTC

10831.

Mycobacterium thermoresistibile Tsukamura 1966 emend. Nouioui et al. 2018*

S36


41353 = CIP 105390 = DSM 44167 = JCM 6362 =

NCTC 10409.

Mycobacterium triplex Floyd et al. 1997 emend.


Type strain: 90-1019 = ATCC 700071 = CIP 106108 =

DSM 44626 = JCM 14744.

Mycobacterium vaccae Bönicke and Juhasz 1964



105934 = DSM 43292 = HAMBI 2276 = JCM

6389 = NBRC 14118 = NCTC 10916.

Mycobacterium vanbaalenii Khan et al. 2002 emend.


Type strain: PYR-1 = DSM 7251 = JCM 13017 =

NRRL B-24157.

Mycobacterium vulneris van Ingen et al. 2009



45247.

Mycobacterium wolinskyi Brown et al. 1999 emend.


Type strain: MO739 = ATCC 700010 = CCUG 47168

= CIP 106348 = DSM 44493 = JCM 13393.

Mycobacterium xenopi Schwabacher 1959 emend.



31306 = CIP 104035 = DSM 43995 = JCM 15661

= NCTC 10042.

Nakamurella multipartita (Yoshimi et al. 1996) Tao


Type strain: Y-104 = ATCC 700099 = CIP 104796 =

DSM 44233 = JCM 9543.

Nesterenkonia alba Luo et al. 2009 emend. Nouioui

et al. 2018*

Type strain: CAAS 252 = CCTCC AB 207011 = DSM

19423 = JCM 16549.

Nitriliruptor alkaliphilus Sorokin et al. 2009 emend.


Type strain: ANL-iso2 = UNIQEM U239 = DSM

45188 = NCCB 100119.

Nocardia africana Hamid et al. 2001 emend. Nouioui

et al. 2018* Type strain: SD769 = ATCC BAA-280 = CCUG

46122 = DSM 44491 = JCM 11438 = NBRC

100379 = NCTC 13181.

Nocardia amikacinitolerans Ezeoke et al. 2013


Type strain: W9988 = CCUG 59655 = DSM 45539.

Nocardia asiatica Kageyama et al. 2004 emend.


Type strain: CCUG 48826 = DSM 44668 = IFM 245

= JCM 11892 = NBRC 100129.

Nocardia asteroides (Eppinger 1891) Blanchard 1896



104503 = DSM 43373 = DSM 43757 = JCM 3384

= NBRC 15531 = NCTC 11293 = NRRL B-3828.

Nocardia brasiliensis (Lindenberg 1909) Pinoy 1913



104502 = DSM 43758 = JCM 3374 = NBRC 14402

= NCTC 11294 = VKM Ac-863.

Nocardia brevicatena (Lechevalier et al. 1961)

Goodfellow and Pirouz 1982 emend. Nouioui et al.

2018*


104508 = DSM 43024 = IMRU 1086 W = JCM

3029 = NBRC 12119 = NRRL B-2896 = VKM Ac-

936.

Nocardia carnea (Rossi Doria 1891) Castellani and

Chalmers 1913 emend. Nouioui et al. 2018*


104509 = DSM 43397 = JCM 3375 = NBRC 14403

= NRRL B-1336 = NRRL WC-3809 = VKM Ac-

814.

Nocardia crassostreae Friedman et al. 1998 emend.


Type strain: NB4H = ATCC 700418 = CIP 105895 =

DSM 44597 = JCM 10500 = NBRC 100342.

Nocardia farcinica Trevisan 1889 emend. Nouioui et al. 2018*


27778 = CCUG 48656 = CIP 104775 = DSM

43257 = DSM 43578 = DSM 43665 = IEGM 621 =

JCM 3088 = NBRC 15532 = NCTC 11134 = NRRL

B-2089.

Nocardia fluminea Maldonado et al. 2001 emend. Nouioui et al. 2018*

S37

Type strain: S1 = CCUG 46120 = CCUG 46296 = CIP

107226 = DSM 44489 = JCM 11440 = NBRC

100377 = NCIMB 13759.

Nocardia inohanensis Kageyama et al. 2004 emend.


Type strain: DSM 44667 = IFM 0092 = JCM 11891 =

NBRC 100128

Nocardia jejuensis Lee 2006 emend. Nouioui et al.

2018*

Type strain: N3-2 = DSM 44959 = JCM 13281 =

NBRC 103114 = NRRL B-24430.

Nocardia jiangxiensis Cui et al. 2005 emend.


Type strain: 43401 = CGMCC 4.1905 = DSM 17684

= JCM 12861 = NBRC 101359.

Nocardia kruczakiae Conville et al. 2005 emend.


Type strain: ATCC BAA-948 = DSM 44877 = JCM

13032 = NBRC 101016.

Nocardia niigatensis Kageyama et al. 2004 emend.


Type strain: DSM 44670 = IFM0 330 = JCM 11894 =

NBRC 100131.

Nocardia nova Tsukamura 1983 emend. Nouioui et al. 2018*

Type strain: 2338 = R443 = 23095 = ATCC 33726 =

CCUG 45939 = CIP 104777 = DSM 44481 = JCM

6044 = NBRC 15556 = VKM Ac-1971.

Nocardia otitidiscaviarum corrig. Snijders 1924



104514 = DSM 43242 = JCM 3377 = JCM 3393 =

NBRC 14405 = VKM Ac-869.

Nocardia pseudovaccinii Kim et al. 2002 emend.


Type strain: AR 368,38366-20 = DSM 43406 = JCM

11883 = NBRC 100343 = NRRL B-24154.

Nocardia rhamnosiphila Everest et al. 2012 emend.


Type strain: 202GMO = DSM 45147 = NRRL B-

24637.

Nocardia shimofusensis Kageyama et al. 2004

emend. Nouioui et al. 2018* Type strain: DSM 44733 = IFM 10311 = JCM 12122

= NBRC 100134.

Nocardia soli Maldonado et al. 2001 emend. Nouioui

et al. 2018*

Type strain: W30 = CIP 107223 = DSM 44488 = JCM

11441 = NBRC 100376 = NCIMB 13760.

Nocardia transvalensis Pijper and Pullinger 1927



104841 = DSM 43405 = DSM 43582 = JCM 9099

= NBRC 15921 = NRRL B-16037 = VKM Ac-867.

Nocardia uniformis (ex Marton and Szabó 1959) Isik


Type strain: CBS 224.60 = CIP 104824 = CIP 106796

= DSM 43136 = JCM 3224 = NBRC 13702.

Nocardia vaccinii Demaree and Smith 1952 emend.



43285 = ICMP 15782 = JCM 3395 = NBRC 15922

= NCPPB 954 = NRRL WC-3500 = VKM Ac-856.

Nocardia veterana Gürtler et al. 2001 emend.


Type strain: M157222 = CCUG 46118 = CIP 107095

= DSM 44445 = JCM 11307 = NBRC 100344 =

NRRL B-24136.

Nocardia yamanashiensis Kageyama et al. 2004


Type strain: DSM 44669 = IFM 0265 = JCM 11893 =

NBRC 100130.

Nocardioides dokdonensis Park et al. 2008 emend.


Type strain: FR1436 = DSM 22004 = JCM 14815 =

KCTC 19309.

Nocardioides exalbidus Li et al. 2007 emend.


Type strain: RC825 = CCTCC AA206016 = DSM

22017 = IAM 15416 = JCM 23199.

Nocardioides halotolerans Dastager et al. 2009


Type strain: MSL-23 = DSM 19273 = KCTC 19274.

Nocardioides psychrotolerans Liu et al. 2013 emend.


Type strain: RHLT2-1 = CGMCC 1.11156 = DSM

27452 = NBRC 108563.

S38

Nocardioides szechwanensis Liu et al. 2013 emend.


Type strain: RHLT1-17 = CGMCC 1.11147 = DSM

27403 = NBRC 108562.

Nocardiopsis alba corrig. Grund and Kroppenstedt


Type strain: A29 = DSM 43377 = IFO 15097 = JCM

9419 = NBRC 15097 = VKM Ac-1883.

Nocardiopsis alborubida corrig. Grund and


Type strain: ATCC 23612 = CBS 693.72 = CIP

106424 = DSM 40465 = INA 6476/62 = ISP 5465 =

JCM 4717 = KCC S-0717 = NBRC 13392 = RIA

1953 = VKM Ac-1882.

Nocardiopsis alkaliphile Hozzein et al. 2004 emend.



JCM 12678 = YIM 80379.

Nocardiopsis chromatogenes Li et al. 2006 emend.



JCM 15311 = KCTC 19008 = YIM 90109.

Nocardiopsis dassonvillei (Brocq-Rousseau 1904)

Meyer 1976 emend. Nouioui et al. 2018*


43111 = IMET 9605 = IMRU 509 = JCM 7437 =

NBRC 14626 = NCTC 10488 = NRRL B-5397 =

VKM Ac-797.

Nocardiopsis flavescens Fang et al. 2011 emend.


Type strain: SA6 = CGMCC 4.5723 = DSM 45786 =

JCM 17424.

Nocardiopsis gilva Li et al. 2006 emend. Nouioui et al. 2018*


JCM 15312 = KCTC 19006 = YIM 90087.

Nocardiopsis halophila Al-Tai and Ruan 1994


Type strain: IQ-H3 = BCRC 16264 = CGMCC 4.1195

= DSM 44494 = JCM 9892 = KCTC 9825.

Nocardiopsis halotolerans Al-Zarban et al. 2002


Type strain: F100 = DSM 44410 = JCM 11760 =

NBRC 100347 = NRRL B-24124.

Nocardiopsis kunsanensis Chun et al. 2000 emend.


Type strain: HA-9 = DSM 44524 = JCM 10721 =

KCTC 9831 = NBRC 100348

Nocardiopsis listeri Grund and Kroppenstedt 1990


Type strain: ATCC 27442 = CBS 661.72 = DSM

40297 = ISP 5297 = JCM 4782 = KCC S-0782 =

NBRC 13360 = NCTC 434 = RIA 1321 = VKM

Ac-1881.

Nocardiopsis potens Yassin et al. 2009 emend.



45234.

Nocardiopsis prasina (Miyashita et al. 1984) Yassin


Type strain: 208 = ATCC 35940 = DSM 43845 = IFO

14423 = JCM 3336 = NBRC 14423 = VKM Ac-

1880.

Nocardiopsis salina Li et al. 2004 emend. Nouioui et al. 2018*


JCM 13364 = KCTC 19003 = YIM 90010.

Nocardiopsis synnemataformans Yassin et al. 1997


Type strain: IMMIB D-1215 = DSM 44143 = JCM

10456 = NBRC 102581.

Nocardiopsis trehalosi (ex Dolak et al. 1981)

Evtushenko et al. 2000 emend. Nouioui et al. 2018*

Type strain: CIP 106425 = DSM 44380 = JCM 3357 =

NBRC 14201 = NRRL 12026 = VKM Ac-942.

Nocardiopsis xinjiangensis Li et al. 2003 emend.


Type strain: BCRC 16285 = CCRC 16285 = CCTCC

AA 99004 = DSM 44589 = JCM 12328 = YIM

90004.

Nonomuraea candida le Roes and Meyers 2009


Type strain: HMC10 = DSM 45086 = JCM 15928 =

NRRL B-24552.

Nonomuraea jiangxiensis Li et al. 2012 emend.


Type strain: FXJ1.102 = CGMCC 4.6533 = DSM 45780 = NBRC 106679.

S39

Nonomuraea kuesteri Kämpfer et al. 2005 emend.


Type strain: GW 14-1925 = DSM 44753 = JCM

13854 = NRRL B-24325.

Nonomuraea pusilla corrig. (Nonomura and Ohara

1971) Zhang et al. 1998 emend. Nouioui et al.

2018*

Type strain: ATCC 27296 = BCRC 11619 = CBS

262.72 = CCRC 11619 = CECT 3284 = CIP

106954 = DSM 43357 = IMET 9586 = JCM 3144 =

KCTC 9278 = NBRC 14684 = NCIMB 11116 =

NRRL B-16126 = VKM Ac-1508.

Nonomuraea solani Wang et al. 2013 emend.


Type strain: NEAU-Z6 = CGMCC 4.7037 = DSM

45729.

Oerskovia turbata (Erikson 1954) Prauser et al. 1970


Type strain: 27 = 891 = ATCC 25835 = CFBP 4266 =

CIP 100331 = DSM 20577 = JCM 3160 = LMG

4072 = NBRC 15015 = NCIB 10587 = NCIMB

10587 = NCTC 11973 = NRRL B-8019 = VKM

Ac-1024.

Olsenella umbonata Kraatz et al. 2011 emend.


Type strain: lac31 = CCUG 58604 = DSM 22620 =

JCM 16156.

Ornithinimicrobium pekingense Liu et al. 2008


Type strain: LW6 = CGMCC 1.5362 = DSM 21552 =

JCM 14001.

Paeniglutamicibacter gangotriensis (Gupta et al.

2004) Busse 2016 emend. Nouioui et al. 2018*

Type strain: Lz1y = DSM 15796 = JCM 12166.

Parascardovia denticolens (Crociani et al. 1996) Jian

and Dong 2002 emend. Nouioui et al. 2018*

Type strain: B3028 = AS 1.2280 = CCUG 35728 =

CCUG 36886 = DSM 10105 = JCM 12538 =

NCTC 12936.

Patulibacter americanus Reddy and Garcia-Pichel


Type strain: CP177-2 = ATCC BAA-1038 = DSM

16676 = JCM 16550.

Patulibacter minatonensis Takahashi et al. 2006


Type strain: KV-614 = DSM 18081 = JCM 12834 =

NBRC 100761 = NRRL B-24346.

Planomonospora sphaerica Mertz 1994 emend.


Type strain: A51460 = ATCC 51587 = DSM 44632 =

JCM 9374 = NRRL 18923.

Prauserella alba Li et al. 2003 emend. Nouioui et al.

2018*


JCM 13022 = YIM 90005.

Prauserella halophila Li et al. 2003 emend. Nouioui

et al. 2018*


JCM 13023 = YIM 90001.

Prauserella rugosa (Lechevalier et al. 1986) Kim and

Goodfellow 1999 emend. Nouioui et al. 2018*


43194 = IMRU 3760 = JCM 9736 = NBRC 14506

= NCIMB 8926 = NRRL B-2295 = VKM Ac-1243.

Promicromonospora thailandica Thawai and Kudo


Type strain: S7F-02 = BCC 41922 = DSM 26652 =

JCM 17130.

Promicromonospora umidemergens Martin et al.


Type strain: 09-Be-007 = CCM 7634 = DSM 22081.

Propionibacterium freudenreichii van Niel 1928


Type strain: ATCC 6207 = CCUG 7433 = CIP 103026

= DSM 20271 = HAMBI 274 = LMG 16412 =

NBRC 12424 = NCTC 10470 = NRRL B-3523.

Propionibacterium lymphophilum (Torrey 1916)

Johnson and Cummins 1972 emend. Nouioui et al.

2018*


103263 = DSM 4903 = JCM 5829 = LMG 16728 =

NCTC 11866 = VPI 7625B.

Pseudarthrobacter phenanthrenivorans (Kallimanis

et al. 2009) Busse 2016 emend. Busse and

Schumann 2019

Type strain: Sphe3 = DSM 18606 = JCM 16027 =

LMG 23796T.

Ref.: IJSEM, 2019, 69: 3508–3511.

S40

Pseudarthrobacter scleromae (Huang et al. 2005)

Busse 2016 emend. Busse and Schumann 2019

Type strain: YH-2001 = CGMCC 1.3601 = CIP

108992 = DSM 17756 = JCM 12642.

Ref.: IJSEM, 2019, 69: 3508–3511.

Pseudonocardia alni (Evtushenko et al. 1989)

Warwick et al. 1994 emend. Nouioui et al. 2018*

Type strain: 3LS = DSM 44104 = IFO 14991 = JCM

9103 = NBRC 14991 = VKM Ac-901.

Pseudonocardia ammonioxydans Liu et al. 2006


Type strain: H9 = CGMCC 4.1877 = DSM 44958 =

JCM 12462.

Pseudonocardia asaccharolytica Reichert et al. 1998


Type strain: 580 = CIP 105685 = DSM 44247 = IFO

16224 = JCM 10410 = NBRC 16224.

Pseudonocardia autotrophica (Takamiya and Tubaki

1956) Warwick et al. 1994 emend. Nouioui et al.

2018*


40011 = DSM 535 = JCM 4348 = NBRC 12743 =

NRRL B-11275 = VKM Ac-941.

Pseudonocardia oroxyli Gu et al. 2006 emend.


Type strain: D10 = CGMCC 4.3143 = DSM 44984 =

JCM 13909.

Pseudonocardia thermophila Henssen 1957 emend.



= NBRC 15559 = VKM Ac-896.

Pseudoscardovia suis Killer et al. 2014 emend.


Type strain: DPTE4 = CCM 7942 = DSM 24744.

Quadrisphaera granulorum Maszenan et al. 2005


Type strain: AG019 = ATCC BAA-1104 = DSM

44889 = JCM 16010.

Rathayibacter toxicus (Riley and Ophel 1992) Sasaki


Type strain: CS14 = ATCC 49908 = CIP 104617 =

DSM 7488 = ICMP 9525 = JCM 9669 = NCPPB

3552.

Renibacterium salmoninarum Sanders and Fryer


Type strain: Lea-1-74 = ATCC 33209 = CIP 103036 =

DSM 20767 = JCM 11484 = LMG 10846 = NBRC

15589.

Rhodococcus coprophilus Rowbotham and Cross


Type strain: ATCC 29080 = CIP 104178 = CUB 687 =

DSM 43347 = IEGM 600 = JCM 3200 = LMG

5357 = NBRC 100603 = NCIB 11211 = NCIMB

11211 = NCTC 10994 = NRRL B-16537 = VKM

Ac-571.

Rhodococcus corynebacterioides (Serrano et al. 1972) Yassin and Schaal 2005 emend. Nouioui et

al. 2018*


104510 = DSM 20151 = JCM 3376 = JCM 3391 =

NBRC 14404 = NRRL B-24037.

Rhodococcus defluvii Kämpfer et al. 2014 emend.


Type strain: Ca11 = DSM 45893 = LMG 27563.

Rhodococcus erythropolis (Gray and Thornton 1928)

Goodfellow and Alderson 1979 emend. Nouioui et

al. 2018*

Type strain: IEGM 7 = ATCC 4277 = CIP 104179 =

DSM 43066 = HAMBI 1953 = JCM 20419 = JCM

3201 = LMG 5359 = N11 = NBRC 15567 = NCIB

9158 = NCIMB 9158 = NCTC 13021 = NRRL B-

16025 = VKM Ac-858.

Rhodococcus fascians (Tilford 1936) Goodfellow


Type strain: ATCC 12974 = CFBP 2401 = CIP 104713

= DSM 20669 = ICMP 5833 = JCM 10002 = LMG

3623 = NBRC 12155 = NCPPB 3067 = NRRL B-

16937 = VKM Ac-1462.

Rhodococcus globerulus Goodfellow et al. 1985


Type strain: R-58 = ATCC 25714 = CIP 104174 =

DSM 43954 = DSM 43956 = IEGM 591 = JCM

7472 = NBRC 14531 = NRRL B-16938.

Rhodococcus gordoniae Jones et al. 2004 emend.


Type strain: W 4937 = DSM 44689 = JCM 12658 =

NCTC 13296.

Rhodococcus hoagii (Morse 1912) Kämpfer et al.

2014 emend. Nouioui et al. 2018* Type strain: ATCC 7005 = CCUG 20991 = CIP 81.17

S41

= DSM 20295 = JCM 1319 = NBRC 103062 =

NCTC 10673.

Rhodococcus imtechensis Ghosh et al. 2006 emend.


Type strain: RKJ300 = DSM 45091 = JCM 13270 =

MTCC 7085.

Rhodococcus koreensis Yoon et al. 2000 emend.


Type strain: DNP 505 = CIP 106721 = DSM 44498 =

JCM 10743 = KCTC 0569BP = NBRC 100607.

Rhodococcus maanshanensis Zhang et al. 2002


Type strain: M712 = AS 4.1720 = DSM 44675 = JCM

11374 = NBRC 100610.

Rhodococcus phenolicus Rehfuss and Urban 2006


Type strain: G2P = DSM 44812 = JCM 14914 =

NRRL B-24323.

Rhodococcus pyridinivorans Yoon et al. 2000 emend.


Type strain: PDB9 = DSM 44555 = JCM 10940 =

KCCM 80005 = KCTC 0647BP = NBRC 100608.

Rhodococcus qingshengii Xu et al. 2007 emend.


Type strain: djl-6 = CGMCC 1.6580 = DSM 45222 =

JCM 15477 = KCTC 19205.

Rhodococcus rhodnii Goodfellow and Alderson 1979



43336 = IEGM 555 = JCM 3203 = KCC A-0203 =

LMG 5363 = NBRC 100604 = NCIB 11279 =

NCIMB 11279 = NRRL B-16535 = Strain N445 =

VKM Ac-1187.

Rhodococcus rhodochrous (Zopf 1891) Tsukamura



104376 = DSM 43241 = HAMBI 1959 = IEGM 62

= JCM 3202 = LMG 5365 = NBRC 16069 = NCTC

10210 = NRRL B-16536 = NRRL B-2149 = VKM

Ac-1227.

Rhodococcus ruber (Kruse 1896) Goodfellow and

Alderson 1977 emend. Nouioui et al. 2018*

Type strain: CIP 104180 = DSM 43338 = IEGM 70 =

IFO 15591 = JCM 3205 = KCC A-0205 = LMG 5366 = NBRC 15591 = VKM Ac-1021.

Rhodococcus triatomae Yassin 2005 emend. Nouioui

et al. 2018*


44892 = NBRC 103116.

Rhodococcus tukisamuensis Matsuyama et al. 2003


Type strain: Mb8 = DSM 44783 = JCM 11308 =

NBRC 100609 = NCIMB 13903.

Rhodococcus wratislaviensis (Goodfellow et al.

1995) Goodfellow et al. 2002 emend. Nouioui et al.

2018*


105033 = DSM 44107 = JCM 9689 = N805 =

NBRC 100605 = NCIMB 13082 = VKM Ac-1986.

Rhodococcus zopfii Stoecker et al. 1994 emend.


Type strain: T-1 = ATCC 51349 = CIP 104275 = DSM

44108 = JCM 9919 = NBRC 100606 = NRRL B-

16942.

Rothia dentocariosa (Onishi 1949) Georg and Brown



81.83 = DSM 43762 = DSM 46363 = JCM 3067 =

NBRC 12531 = NCTC 10917 = NRRL B-8017.

Rothia mucilaginosa (Bergan and Kocur 1982)

Collins et al. 2000 emend. Nouioui et al. 2018*


20962 = CIP 71.14 = DSM 20746 = JCM 10910 =

NBRC 15673 = NCTC 10663.

Rubrobacter aplysinae Kämpfer et al. 2014 emend.


Type strain: RV113 = CECT 8425 = DSM 27440.

Rubrobacter radiotolerans (Yoshinaka et al. 1973)

Suzukiet al. 1989 emend. Nouioui et al. 2018*


46359 = DSM 5868 = IAM 12072 = JCM 2153 =

NBRC 14777 = VKM Ac-1989.

Rubrobacter xylanophilus Carreto et al. 1996 emend.


Type strain: PRD-1 = CIP 105412 = DSM 9941 =

JCM 11954 = NBRC 100952 = NBRC 16129

Saccharomonospora azurea Runmao 1987 emend.

Nouioui et al. 2018* Type strain: NA-128 = ATCC 43670 = DSM 44631 =

S42

JCM 7551 = NBRC 14651 = SIIA 86128.

Saccharomonospora cyanea Runmao et al. 1988


Type strain: NA-134 = ATCC 43724 = DSM 44106 =

IFO 14841 = JCM 7552 = NBRC 14841 = SIIA

86134.

Saccharomonospora glauca Greiner-Mai et al. 1988


Type strain: K62 = DSM 43769 = JCM 7444 = NBRC

14831.

Saccharomonospora halophila Al-Zarban et al. 2002


Type strain: 8 = DSM 44411 = JCM 11761 = NRRL

B-24125.

Saccharomonospora xinjiangensis Jin et al. 1998


Type strain: XJ-54= CCTCC AA 97021 = DSM 44391

= JCM 11270.

Saccharopolyspora antimicrobica Yuan et al. 2008


Type strain: I05-00074 = CCM 7463 = DSM 45119 =

JCM 16610 = KCTC 19303.

Saccharopolyspora erythraea (Waksman 1923)

Labeda 1987 emend. Nouioui et al. 2018*

Type strain: ATCC 11635 = DSM 40517 = HUT 6087

= IAM 45 = ISP 5517 = JCM 4026 = JCM 4748 =

NBRC 13426 = NRRL 2338 = VKM Ac-1189.

Saccharopolyspora flava Lu et al. 2001 emend.


Type strain: 07 = AS4.1520 = DSM 44771 = JCM

10665 = NBRC 16345.

Saccharopolyspora rectivirgula (Krasil'nikov and

Agre 1964) Korn-Wendisch et al. 1989 emend.


Type strain: ATCC 33515 = DSM 43747 = INMI 683

= JCM 3057 = NBRC 12464 = NRRL B-16280 =

VKM Ac-810.

Saccharopolyspora spinosa Mertz and Yao 1990


Type strain: A83543.1 = ATCC 49460 = DSM 44228

= JCM 9375 = NBRC 15153 = NRRL 18395.

Saccharothrix syringae (Gause and Sveshnikova

1985) Grund and Kroppenstedt 1990 emend. Nouioui et al. 2018*

Type strain: ATCC 51364 = DSM 43886 = INA 2240

= JCM 6844 = NBRC 14523 = NRRL B-16468 =

VKM Ac-1858.

Salinispora pacifica Ahmed et al. 2014 emend.


Type strain: CNR-114 = DSM 45820 = KACC 17160

= NBRC 109968.

Salinispora tropica Maldonado et al. 2005 emend.


Type strain: CNB-440 = ATCC BAA-916 = DSM

44818 = JCM 13857 = NBRC 105044.

Sanguibacter keddieii Fernández-Garayzábal et al.


Type strain: ST-74 = ATCC 51767 = CCUG 36690 =

CECT 4540 = CIP 106323 = DSM 10542 = JCM

11429 = NBRC 16158 = NCFB 3025 = NCIMB

703025.

Scardovia inopinata (Crociani et al. 1996) Jian and

Dong 2002 emend. Nouioui et al. 2018*

Type strain: B3109 = AS 1.2187 = CCUG 35729 =

DSM 10107 = JCM 12537 = NCTC 12937.

Sciscionella marina Tian et al. 2009 emend. Nouioui

et al. 2018*

Type strain: CCTCC AA208009 = DSM 45152 =

JCM 16222 = KCTC 19433 = SCSIO 00231.

Segniliparus rotundus Butler et al. 2005 emend.


Type strain: ATCC BAA-972 = CDC 1076 = CIP

108378 = DSM 44985 = JCM 13578.

Segniliparus rugosus Butler et al. 2005 emend.


Type strain: ATCC BAA-974 = CDC 945 = CIP

108380 = DSM 45345 = JCM 13579.

Senegalimassilia anaerobia corrig. Lagier et al. 2014


Type strain: JC110 = CSUR P147 = DSM 25959.

Sinomonas atrocyanea (Kuhn and Starr 1960) Zhouet


Type strain: ATCC 13752 = CGMCC 1.1891 = CIP

102365 = DSM 20127 = JCM 1329 = LMG 3814 =

NBRC 12956 = VKM Ac-1104.

Sinomonas mesophila Prabhu et al. 2015 emend.

Nouioui et al. 2018* Type strain: MPKL 26 = DSM 28729 = JCM 30094 =

S49



12069 = CBS 291.60 = CBS 570.68 = CCRC

12069 = DSM 40094 = JCM 4425 = KCTC 1747 =

NBRC 12827 = NBRC 3729 = NRRL B-1446 =

NRRL ISP-5094 = RIA 1097 = UNIQEM 205 =

VKM Ac-1218

Streptomyces vitaminophilus corrig. (Shomura et al. 1983) Goodfellow et al. 1986 emend. Nouioui et al.

2018*

Type strain: SF 2080 = ATCC 31673 = DSM 41686 =

JCM 6054 = NBRC 14294 = NRRL B-16933.

Streptomyces wedmorensis (ex Milard and Burr

1926) Preobrazhenskaya 1986 emend. Nouioui et

al. 2018*

Type strain: ATCC 21239 = BCRC 12667 = CCRC

12667 = CECT 3245 = DSM 41676 = ICMP 12544

=JCM 4937 = NBRC 14062 = NRRL 3426 = VKM

Ac-1861.

Streptomyces xanthophaeus Lindenbein 1952 emend.



572.68 = CCRC 13756 = DSM 40134 = JCM 4426

= KCTC 9220 = NBRC 12829 = NRRL B-5414 =

NRRL-ISP 5134 = RIA 1099 = UNIQEM 208 =

VKM Ac-1205 = VKM Ac-1823.

Streptomyces yanglinensis Xu et al. 2006 emend.



JCM 13275 = NBRC 102071.

Streptomyces yeochonensis Kim et al. 2004 emend.


Type strain: CN 732 = DSM 41868 = IMSNU 50114

= JCM 12366 = KCTC 9926 = NBRC 100782 =

NRRL B-24245.

Streptomyces yokosukanensis Nakamura 1961



662.69 = CCRC 11875 = DSM 40224 = JCM 4137

= JCM 4559 = NBRC 13108 = NRRL B-3353 =

NRRL ISP-5224 = RIA 1300 = VKM Ac-1713.

Streptosporangium amethystogenes Nonomura and

Ohara 1960 emend. Nouioui et al. 2018*


= KCC A-0026 = NBRC 13986 = NRRL B-2639 =

VKM Ac-637.

Streptosporangium canum Zhang et al. 2009 emend.



HBUM 170018 = JCM 16802.

Streptosporangium roseum Couch 1955 emend.



= NBRC 3776 = NRRL 2505 = VKM Ac-807.

Tessaracoccus bendigoensis Maszenan et al. 1999


Type strain: Ben 106 = ACM 5119 = DSM 12906 =

JCM 13525.

Tessaracoccus flavus Kumari et al. 2016 emend.


Type strain: RP1 = DSM 100159 = KCTC 39686 =

MCC 2769.

Tessaracoccus oleiagri Cai et al. 2011 emend.


Type strain: SL014B-20A1 = CGMCC 1.9159 = DSM

22955

Tetrasphaera jenkinsii McKenzie et al. 2006 emend.


Type strain: Ben 74 = DSM 17519 = JCM 15590 =

NCIMB 14128.

Thermoactinospora rubra Zhou et al. 2012 emend.



DSM 45616 = YIM 77501.

Thermobifida cellulosilytica corrig. Kukolya et al.


Type strain: TB100 = DSM 44535 = JCM 11767 =

NCAIM B.01997.

Thermobifida fusca (McCarthy and Cross 1984)


Type strain: 190 Th = ATCC 27730 = DSM 43792 =

NCIB 11185.

Thermobifida halotolerans Yang et al. 2008 emend.


Type strain: DSM 44931 = JCM 16012 = KCTC

19123 = YIM 90462.

Thermobispora bispora (Henssen 1957) Wang et al. 1996 emend. Nouioui et al. 2018*

Type strain: ATCC 19993 = DSM 43833 = JCM 10125 = NBRC 14880.

S43

NCIM 5552.

Skermania piniformis (Blackall et al. 1989) Chun et


Type strain: UQM 3063 = ATCC 49497 = CIP 104516

= DSM 43998 = DSM 99975 = NBRC 15059.

Slackia exigua (Poco et al. 1996) Wade et al. 1999


Type strain: S-7 = ATCC 700122 = CIP 105133 =

DSM 15923 = JCM 11022.

Slackia heliotrinireducens corrig. (Lanigan 1983)

Wade et al. 1999 emend. Nouioui et al. 2018*

Type strain: RHS 1 = ATCC 29202 = CCUG 47954 =

DSM 20476 = JCM 14554 = NCTC 11029.

Sphaerimonospora mesophila (Nonomura and Ohara

1971) Mingma et al. 2016 emend. Nouioui et al. 2018*


43048 = JCM 3151 = NBRC 14179 = NRRL B-

16986 = VKM Ac-1953.

Sphaerisporangium album Cao et al. 2009 emend. Li

et al. 2019


JCM 16907 = YIM 48782.

Ref.: IJSEM, 2019, 69: 427–433.

Spirillospora albida Couch 1963 emend. Nouioui et

al. 2018*


= NBRC 12248 = NRRL B-3350 = VKM Ac-926.

Sporichthya polymorpha Lechevalier et al. 1968



= NBRC 12702 = NRRL B-3709 = VKM Ac-1863.

Stackebrandtia nassauensis Labeda and


Type strain: LLR-40K-21 = DSM 44728 = JCM

14905 = NBRC 102104 = NRRL B-16338.

Streptacidiphilus albus Kim et al. 2003 emend.


Type strain: JL 83 = DSM 41753 = JCM 12363 =

KCTC 9910 = NBRC 100918.

Streptacidiphilus anmyonensis Cho et al. 2008


Type strain: AM-11 = JCM 16223 = KCTC 19278 = NBRC 103185.

Streptacidiphilus carbonis Kim et al. 2003 emend.


Type strain: JL 415 = DSM 41754 = JCM 12364 =

KCTC 9912 = NBRC 100919.

Streptacidiphilus melanogenes Cho et al. 2008


Type strain: SB-B34 = JCM 16224 = KCTC 19280 =

NBRC 103184.

Streptacidiphilus neutrinimicus Kim et al. 2003


Type strain: JL206 = DSM 41755 = JCM 12365 =

KCTC 9911 = NBRC 100921.

Streptacidiphilus oryzae Wang et al. 2006 emend.


Type strain: TH49 = CGMCC 4.2012 = DSM 45098 =

JCM 13271.

Streptacidiphilus rugosus Cho et al. 2008 emend.


Type strain: AM-16 = JCM 16225 = KCTC 19279 =

NBRC 103186.

Streptoalloteichus hindustanus (ex Tomita et al. 1978) Tomita et al. 1987 emend. Nouioui et al.

2018*

Type strain: C 677-91 = ATCC 31217 = DSM 44523

= JCM 3268 = NBRC 15115 = NCIB 12539 =

NRRL B-11280 = VKM Ac-683.

Streptomonospora alba Li et al. 2003 emend.



JCM 12680 = YIM 90003.

Streptomyces achromogenes Okami and Umezawa


Type strain: Z-4-1 = NIHJ 213 = UNIQEM 115 =

ATCC 12767 = ATCC 19719 = BCRC 11618 =

CBS 458.68 = CCRC 11618 = CECT 3074 = DSM

40028 = HAMBI 1002 = IFM 1173 = IMET 43080

= JCM 4121 = JCM 4561 = KCTC 1740 = NBRC

12735 = NRRL B-2120 = NRRL ISP-5028 = PCM

2365 = RIA 1000 = RIA 756 = VKM Ac-1258.

Streptomyces aidingensis Xia et al. 2013 emend.


Type strain: CGMCC 4.5739 = DSM 42133 = NBRC

108211 = TRM 46012.

Streptomyces albidoflavus (Rossi Doria 1891)

S44

Waksman and Henrici 1948 emend. Nouioui et al. 2018*


416.34 = CBS 920.69 = CCRC 13699 = CIP

105122 = DSM 40455 = ICMP 12537 = JCM 4446

= KCTC 9202 = LMG 19300 = NBRC 13010 =

NCIMB 10043 = NRRL B-1271 = NRRL B-2663 =

NRRL ISP-5455 = RIA 1202 = VKM Ac-746.

Streptomyces alboflavus (Waksman and Curtis 1916)


Type strain: AS 4.1461 = ATCC 12626 = ATCC 23874

= BCRC 13664 = CBS 613.68 = CCRC 13664 =

CIP 104427 = DSM 40045 = IMET 42936 = JCM

4615 = KCTC 9674 = NBRC 13196 = NRRL B-

1273 = NRRL B-2373 = NRRL ISP-5045 = RIA

1112 = VKM Ac-972.

Streptomyces albus (Rossi Doria 1891) Waksman and

Henrici 1943 emend. Nouioui et al. 2018*

Type strain: AS 4.164 = ATCC 25426 = ATCC 3004 =

BCRC 10802 = CBS 410.63 = CBS 924.69 =

CCRC 10802 = CCUG 33990 = CECT 3077 = CIP

104432 = DSM 40313 = HUT 6613 = IFM 1119 =

IMET 40241 = IMRU 3004 = JCM 4177 = JCM

4450 = KCTC 1082 = NBRC 13014 = NBRC 3710

= NCIMB 9558 = NRRL B-1811 = NRRL B-2208

= NRRL ISP-5313 = RIA 1206 = VKM Ac-35.

Streptomyces alni Liu et al. 2009 emend. Nouioui et

al. 2018*

Type strain: D65 = CGMCC 4.3510 = DSM 42036 =

JCM 16122 = NRRL B-24611.

Streptomyces ambofaciens Pinnert-Sindico 1954



616.68 = CCRC 11857 = CECT 3101 = DSM

40053 = JCM 4204 = JCM 4618 = KCTC 9111 =

NBRC 12836 = NRRL 2420 = NRRL B-2516 =

NRRL ISP-5053 = RIA 1115.

Streptomyces amritsarensis Sharma et al. 2014


Type strain: 2A = JCM 19660 = MTCC 11845.

Streptomyces antibioticus (Waksman and Woodruff

1941) Waksman and Henrici 1948 emend. Nouioui

et al. 2018*

Type strain: ATCC 23879 = ATCC 8663 = BCRC

12164 = CBS 478.48 = CBS 659.68 = CCM 3159 =

CCRC 12164 = CECT 3225 = DSM 40234 =IMET 40227 = JCM 4620 = KCTC 9688 = LMG 5966 =

NBRC 12838 = NCIMB 8504 = NRRL B-1701 =

NRRL B-2770 = NRRL ISP-5234 = RIA 1174 =

VKM Ac-964.

Streptomyces atroolivaceus (Preobrazhenskaya et al.

1957) Pridham et al. 1958 emend. Nouioui et al. 2018*


12073 = CBS 464.68 = CCRC 12073 = CCUG

11112 = CECT 3316 = DSM 40137 = IMET 43088

= INA 4776 = JCM 4345 = KCTC 9017 = LMG

19306 = NBRC 12741 = NRRL-ISP 5137 = RIA

1006 = UNIQEM 121 = VKM Ac-970.

Streptomyces aureocirculatus (Krasil'nikov and Yuan

1965) Pridham 1970 emend. Nouioui et al. 2018*


= ATCC 25430 = CBS 928.69 = DSM 40386 =

INMI 735 = JCM 4454 = NBRC 13018 = NRRL B-

3324 = NRRL ISP-5386 = RIA 1210 = RIA 682.

Streptomyces azureus Kelly et al. 1959 emend.



= BCRC 12479 = CBS 467.68 = CCRC 12479 =

DSM 40106 = IMET 43765 = JCM 4564 = NBRC

12744 = NRRL B-2655 = NRRL ISP-5106 = PCM

2313 = RIA 1009 = UNIQEM 122 = VKM Ac-719.

Streptomyces baldaccii corrig. (Farina and Locci

1966) Witt and Stackebrandt 1991 emend. Nouioui

et al. 2018*

Type strain: ATCC 23654 = DSM 40845 = HUT 6222

= IPV 1339 = IPV 174 = JCM 4272 = NBRC

14693 = NRRL B-3500.

Streptomyces bikiniensis Johnstone and Waksman


Type strain: AS 4.0569 = ATCC 11062 = CBS 412.54

= DSM 40581 = HUT 6084 = IFM 1057 = IMET

41362 = JCM 4011 = KCTC 9172 = NBRC 14598

= NRRL B-1049 = NRRL B-2690 = NRRL ISP-

5581 = RIA 471 = RIA 74 = VKM Ac-999.

Streptomyces bottropensis Waksman 1961 emend.



12063 = CBS 163.64 = CBS 667.69 = CCRC

12063 = CIP 105278 = DSM 40262 = JCM 4459 =

NBRC 13023 = NRRL ISP-5262 = RIA 1215 =

VKM Ac-1755.

Streptomyces bungoensis Eguchi et al. 1993 emend. Nouioui et al. 2018*

S45

Type strain: MS16-10G = AS 4.1653 = DSM 41781 =

CM 9925 = NBRC 15711.

Streptomyces caeruleus (Baldacci 1944) Pridham et al. 1958 emend. Nouioui et al. 2018*


645.72 = CCRC 13659 = DSM 40103 = IMET

40622 = IPV 930 = ISP 5103 = JCM 4014 = JCM

4730 = NBRC 13344 = NRRL B-1623 = NRRL B-

2194 = NRRL ISP-5103 = RIA 1305 = RIA 755 =

VKM Ac-1918.

Streptomyces canus Heinemann et al. 1953 emend.



= BCRC 13652 = CBS 475.68 = CCRC 13652 =

DSM 40017 = IFM 1092 = JCM 4212 = JCM 4569

= LMG 19329 = NBRC 12752 = NCIMB 9627 =

NRRL B-1989 = NRRL B-3980 = NRRL-ISP 5017

= RIA 1017 = UNIQEM 125 = VKM Ac-1011.

Streptomyces catenulae Davisson and Finlay 1961



= BCRC 12092 = CBS 679.68 = CCRC 12092 =

DSM 40258 = HAMBI 986 = IMET 42944 = JCM

4353 = KCTC 9223 = NBRC 12848 = NRRL B-

2342 = NRRL ISP-5258 = RIA 1183 = VKM Ac-

758.

Streptomyces cellostaticus Hamada 1958 emend.



= DSM 40189 = JCM 4183 = JCM 4631 = NBRC

12849 = NCIMB 9830 = NRRL-ISP 5189 = RIA

1143 = VKM Ac-1222.

treptomyces celluloflavus Nishimura et al. 1953


Type strain: AS 4.1659 = ATCC 29806 = CECT 3242

= DSM 40839 = JCM 4126 = KCTC 9702 = NBRC

13780 = NRRL B-2493.

Streptomyces chryseus (Krasil’nikov et al. 1965)

Pridham 1970 emend. Cortés-Albayay et al. 2019


= DSM 40420 = ISP 5420 = JCM 4737 = NBRC

13377 = NCIMB 10041 = NRRL B-12347 = RIA

1338 = VKM Ac-200.

Ref.: IJSEM, 2019, 69: 2498–2505.

Streptomyces cinnabarinus (Ryabova and

Preobrazhenskaya 1957) Pridham et al. 1958 emend. Nouioui et al. 2018*


= CBS 671.69 = DSM 40467 = INA 1242 = JCM

4463 = NBRC 13028 = NRRL B-12382 = NRRL-

ISP 5467 = PCM 2311 = RIA 1220 = VKM Ac-

1904.

Streptomyces clavuligerus Higgens and Kastner 1971



11518 = CBS 226.75 = CCRC 11518 = CECT 3125

= DSM 40751 = DSM 41253 = DSM 738 = IMET

43657 = JCM 4710 = KCTC 9095 = NBRC 13307

= NCIMB 12785 = NRRL 3585 = VKM Ac-602.

Streptomyces corchorusii Ahmad and Bhuiyan 1958



11821 = CBS 677.69 = CCRC 11821 = DSM

40340 = JCM 4286 = JCM 4467 = KCTC 9715 =

LMG 20488 = NBRC 13032 = NCIMB 9476 =

NCIMB 9979 = NRRL B-12289 = NRRL-ISP 5340

= RIA 1224 = VKM Ac-1906.

Streptomyces curacoi Cataldi 1963 emend. Nouioui

et al. 2018*

Type strain: SC 3604 ATCC 13385 = CBS 484.68 =

DSM 40107 = JCM 4219 = NBRC 12761 = NRRL

ISP-5107 = RIA 1026.

Streptomyces cyaneofuscatus (Kudrina 1957)

Pridham et al. 1958 emend. Nouioui et al. 2018*

Type strain: INA 99/54 = UNIQEM 133 = AS 4.1612

= ATCC 19746 = ATCC 23619 = BCRC 11467 =

CBS 485.68 = CCRC 11467 = DSM 40148 = IMET

41583 = JCM 4364 = NBRC 13190 = NCIMB


1027 = VKM Ac-752.

Streptomyces durhamensis Gordon and Lapa 1966



= DSM 40539 = HAMBI 1064 = IMET 43359 =

JCM 4291 = JCM 4747 = KCTC 9723 = NBRC


1402 = VKM Ac-763.

Streptomyces exfoliatus (Waksman and Curtis 1916)



= BCRC 11469 = CBS 489.68 = CCRC 11469 =

CCUG 11113 = DSM 40060 = JCM 4366 = LMG

19307 = NBRC 13191 = NCIMB 12599 = NRRL B-1237 = NRRL B-2924 = NRRL ISP-5060 =

S46

PCM 2367 = RIA 1031 = VKM Ac-767.

Streptomyces flavovariabilis (ex Korenyako and

Nikitina 1965) Sveshnikova 1986 emend. Nouioui

et al. 2018*

Type strain: INMI 702 = ATCC 43684 = DSM 41479

= DSM 41503 = DSM 41688 = JCM 9089 = NBRC

100764 = NRRL B-16367 = VKM Ac-141.

Streptomyces griseofuscus Sakamoto et al. 1962



837.68 = CCRC 10483 = CECT 3307 = DSM

40191 = IMET 42068 = JCM 4276 = JCM 4641 =

NBRC 12870 = NCIMB 9821 = NRRL B-5429 =

NRRL-ISP 5191 = RIA 1145 = VKM Ac-1707.

Streptomyces griseolus (Waksman 1923) Waksman

and Henrici 1948 emend. Nouioui et al. 2018*


= BCRC 13677 = CBS 502.68 = CCRC 13677 =

DSM 40067 = HAMBI 1000 = HUT 6056 = HUT

6099 = IMET 42053 = JCM 4042 = JCM 4043 =

JCM 4581 = KCTC 9028 = NBRC 12777 = NBRC

3415 = NBRC 3719 = NCIMB 9606 = NRRL B-


1044 = RIA 88 = VKM Ac-1726

Streptomyces griseoruber Yamaguchi and Saburi



11826 = CBS 903.68 = CCRC 11826 = CCUG

11117 = DSM 40281 = HAMBI 1051 = JCM 4200

= JCM 4642 = LMG 19325 = NBRC 12873 =


VKM Ac-1900.

Streptomyces griseorubiginosus (Ryabova and

Preobrazhenskaya 1957) Pridham et al. 1958


Type strain: INA 7712 = ATCC 23627 = ATCC 25459

= BCRC 12124 = CBS 692.69 = CCRC 12124 =

DSM 40469 = JCM 4481 = LMG 19941 = NBRC

13047 = NRRL B-12384 = NRRL-ISP 5469 = RIA

1239 = VKM Ac-1203.

Streptomyces griseus (Krainsky 1914) Waksman and

Henrici 1948 emend. Nouioui et al. 2018*


= BCRC 13478 = CBS 905.68 = CCRC 13478 =

CCT 4836 = CCUG 11104 = CECT 3330 = CFBP

4546 = CIP 105124 = DSM 40236 = DSM 46642 =

HAMBI 2315 = JCM 4047 = JCM 4644 = KCTC 9080 = KCTC 9135 = LMG 19302 = NBRC 12875

= NBRC 15744 = NCIMB 13023 = NCTC 13033 =

NRRL B-2682 = NRRL ISP-5236 = PCM 2331 =

RIA 1176 = VKM Ac-800.

Streptomyces halstedii (Waksman and Curtis 1916)


Type strain: IMET 40322 = UNIQEM 156 = ATCC

10897 = ATCC 19770 = BCRC 13680 = CBS

508.68 = CCRC 13680 = CECT 3328 = DSM

40068 = HAMBI 993 = JCM 4584 = NBRC 12783

= NCIMB 9839 = NRRL B-1238 = NRRL ISP-

5068 = RIA 1050 = VKM Ac-1768.

Streptomyces indicus Luo et al. 2011 emend. Nouioui

et al. 2018*

Type strain: IH32-1 = CGMCC 4.5727 = DSM 42001.

Streptomyces kebangsaanensis Sarmin et al. 2013


Type strain: SUK12 = DSM 42048 = NRRL B-24860.

Streptomyces laurentii Trejo et al. 1979 emend.



= LMG 19959 = NBRC 15422 = PCM 2368.

Streptomyces lavendulae (Waksman and Curtis 1916)

Waksman and Henrici 1948 emend. Nouioui et al.

2018*

Type strain: ATCC 19777 = ATCC 23950 = ATCC

8664 = CBS 515.68 = CCM 3010 = CCUG 11120 =

DSM 2014 = DSM 40069 = DSM 40213 = HUT

6006 = IFM 1031 = JCM 4055 = JCM 4589 = JCM

4664 = KCTC 1398 = NBRC 12789 = NCIMB

9840 = NRRL B-1230 = NRRL B-5617 = NRRL-

ISP 5069 = NRRL ISP-5213 = RIA 1057 = RIA

1159 = RIA 144 = RIA 531 = RIA 744 = UNIQEM

163 = VKM Ac-1278 = VKM Ac-624.

Streptomyces lincolnensis Mason et al. 1963 emend.



630.70 = CBS 699.69 = CCRC 11173 = DSM 2013

= DSM 40355 = JCM 4287 = JCM 4488 = KCTC

1868 = KCTC 9088 = KCTC 9089 = NBRC 13054

= NCIMB 9413 = NRRL 2936 = NRRL ISP-5355 =

RIA 1246 = VKM Ac-727.

Streptomyces longwoodensis Prosser and Palleroni


Type strain: X-14537 = ATCC 29251 = BCRC 12034

= CCRC 12034 = DSM 41677 = JCM 4976 = KCTC 9783 = NBRC 14251 = NRRL B-16923.

S47

Streptomyces luteus Luo et al. 2017 emend. Nouioui

et al. 2018*

Type strain: CCTCC AA 2014003 = NRRL B-59117 =

TRM 45540.

Streptomyces lydicus De Boer et al. 1956 emend.



11919 = CBS 703.69 = CCRC 11919 = CECT 3163

= DSM 40461 = HAMBI 1063 = IMET 43531 =

JCM 4492 = LMG 19331 = NBRC 13058 =

NCIMB 12977 = NRRL 2433 = NRRL-ISP 5461 =

RIA 1250 = VKM Ac-1869.

Streptomyces megasporus (ex Krasil'nikov et al.

1968) Agre 1986 emend. Nouioui et al. 2018*

Type strain: A1202 = INA M-22 = INMI 2869 =

ATCC 43688 = DSM 41476 = HUT 6610 = JCM

6926 = NBRC 14749 = NRRL B-16372 = VKM

Ac-1776.

Streptomyces melanosporofaciens Arcamone et al.



883.69 = CCRC 12064 = DSM 40318 = JCM 4495

= NBRC 13061 = NCIMB 12978 = NRRL B-12234

= NRRL-ISP 5318 = RIA 1253 = VKM Ac-1864.

Streptomyces misionensis Cercós et al. 1962 emend.



12094 = CBS 885.69 = CCRC 12094 = DSM

40306 = JCM 4497 = NBRC 13063 = NRRL B-

3230 = NRRL ISP-5306 = RIA 1255 = VKM Ac-

626.

Streptomyces monomycini Gause and Terekhova


Type strain: INA 1465 = DSM 41801 = JCM 9768 =

NBRC 100769.

Streptomyces niger (Thirumalachar 1955)

Goodfellow et al. 1986 emend. Nouioui et al.

2018*


230.65 = CBS 663.72 = CCRC 11877 = CMI

112787 = DSM 40302 = DSM 43049 = ISP 5302 =

JCM 3158 = KCC A-0158 = NBRC 13362 =

NBRC 13902 = NCIMB 10992 = NRRL B-3857 =

NRRL ISP-5302 = PCM 2305 = RIA 1323 = VKM

Ac-1736.

Streptomyces nodosus Trejo 1961 emend. Nouioui et

al. 2018*


= BCRC 13768 = CBS 926.68 = CCRC 13768 =

DSM 40109 = JCM 4297 = JCM 4656 = KCTC

9035 = LMG 19340 = NBRC 12895 = NCIMB


1123 = RIA 831 = VKM Ac-1224.

Streptomyces noursei Brown et al. 1953 emend.



240.57 = CCRC 12044 = CECT 3240 = DSM

40635 = DSM 41152 = JCM 4922 = KCTC 1083 =

LMG 5982 = NBRC 15452 = NCIMB 8593 =

NRRL B-1714.

Streptomyces olivaceus (Waksman 1923) Waksman


Type strain: INA 3200 = ATCC 19794 = ATCC 3335

= BCRC 11485 = CBS 546.68 = CCM 3188 =

CCRC 11485 = CCUG 11111 = DSM 40072 = JCM

4402 = NBRC 12805 = NRRL B-1224 = NRRL B-

3009 = NRRL ISP-5072 = RIA 1073 = RIA 481 =

UNIQEM 180 = VKM Ac-254.

Streptomyces olivochromogenes (Waksman 1923)


Type strain: IMET 40352 = ATCC 25479 = ATCC

3336 = CBS 889.69 = DSM 40451 = JCM 4163 =

JCM 4500 = KCTC 9064 = NBRC 13067 = NBRC


1259.

Streptomyces paucisporeus Xu et al. 2006 emend.



JCM 13276 = NBRC 102072.

Streptomyces pini Madhaiyan et al. 2016 emend.


Type strain: PL19 = ICMP 17783 = NRRL B-24728.

Streptomyces platensis Tresner and Backus 1956



11898 = CBS 310.56 = CBS 932.68 = CCRC 11898

= CCUG 11118 = DSM 40041 = JCM 4189 = JCM

4662 = KCTC 1088 = NBRC 12901 = NCAIM

B.01481 = NCIMB 9607 = NRRL 2364 = NRRL

B-5486 = NRRL-ISP 5041 = RIA 1110 = VKM Ac-

1288.

Streptomyces pluripotens Lee et al. 2014 emend.

S48


Type strain: MUSC 135 = DSM 42140 = MCCC

1K00252.

Streptomyces prunicolor (Ryabova and

Preobrazhenskaya 1957) Pridham et al. 1958


Type strain: IMET 43129 = INA 8805/64 = AS 4.1413

= ATCC 25487 = CBS 915.69 = DSM 40335 =

JCM 4508 = LMG 19311 = NBRC 13075 =

NCIMB 9978 = NRRL B-12281 = NRRL-ISP 5335

= PCM 2370 = RIA 1267 = VKM Ac-992.

Streptomyces pseudovenezuelae (Kuchaeva et al. 1961) Pridham 1970 emend. Nouioui et al. 2018*

Type strain: IMET 43512 = ATCC 23951 = BCRC

11487 = CBS 934.68 = CCRC 11487 = DSM

40212 = JCM 11516 = JCM 4405 = NBRC 12904 =


RIA 742 = VKM Ac-1199.

Streptomyces qinglanensis Hu et al. 2012 emend.


Type strain: 172205 = CGMCC 4.6825 = DSM

42035.

Streptomyces resistomycificus Lindenbein 1952



556.68 = CCRC 13755 = DSM 40133 = JCM 4409

= NBRC 12814 = NCIMB 9843 = NRRL 2290 =

NRRL ISP-5133 = PCM 2296 = RIA 1083 =

UNIQEM 190 = VKM Ac-1895.

Streptomyces rimosus Sobin et al. 1953 emend.



= BCRC 11612 = CBS 437.51 = CBS 938.68 =

CCRC 11612 = CECT 3144 = DSM 40260 = DSM

41132 = HAMBI 1066 = HUT 6064 = HUT 6100 =

ICMP 919 = IFM 1065 = JCM 4073 = JCM 4667 =

KCTC 1077 = LMG 19352 = LMG 5984 = NBRC

12907 = NCIMB 8229 = NRRL 2234 = NRRL B-

2659 = NRRL ISP-5260 = RIA 1185 = RIA 606 =

VKM Ac-849.

Streptomyces rubidus Xu et al. 2006 emend. Nouioui

et al. 2018*

Type strain: 13c15 = CGMCC 4.2026 = DSM 41947

= JCM 13277 = NBRC 102073.

Streptomyces seoulensis Chun et al. 1997 emend.

Nouioui et al. 2018* Type strain: IMSNU-1 = IMSNU 21266 = CIP

105312 = DSM 41840 = JCM 10116 = NBRC

16255 = NBRC 16668.

Streptomyces somaliensis (Brumpt 1906) Waksman


Type strain: ATCC 33201 = DSM 40738 = IMRU

1274 = JCM 12659 = NCTC 11332.

Streptomyces specialis Kämpfer et al. 2008 emend.


Type strain: GW41-1564 = CCM 7499 = DSM 41924

= JCM 16611.

Streptomyces sulphureus (Gasperini 1894) Waksman



646.72 = CCRC 13764 = DSM 40104 = HUT 6080

=IMET 40623 = JCM 4085 = JCM 4835 = LMG

19355 = NBRC 13345 = NRRL B-1627 = NRRL

B-2195 = NRRL-ISP 5104 = RIA 1306 = VKM Ac-

1820.

Streptomyces varsoviensis Kurylowicz and Wóznicka


Type strain: AS 4.1431 = ATCC 14631 C = ATCC

25505 = BCRC 12647 = CBS 357.64 = CBS

647.69 = CCRC 12647 = DSM 40346 = DSM

40677 = HAMBI 1046 = IMET 43351 = JCM 4303

= JCM 4523 = NBRC 13093 = NCIMB 9522 =


VKM Ac-1000.

Streptomyces venezuelae Ehrlich et al. 1948 emend.



= BCRC 11512 = CBS 650.69 = CCRC 11512 =

DSM 40230 = DSM 41109 = MET 41356 = JCM

4526 = LMG 19308 = NBRC 12595 = NBRC

13096 = NRRL 2277 = NRRL ISP-5230 = RIA

1288 = RIA 70 = VKM Ac-589.

Streptomyces vietnamensis Zhu et al. 2007 emend.


Type strain: GIMV4.0001 = CCTCC M 205143 =

DSM 41927 = IAM 15340 = JCM 21785 = NBRC

104153.

Streptomyces violaceorubidus Terekhova 1986


Type strain: INA 770 = ATCC 43697 = DSM 41478 =

JCM 6931 = LMG 20319 = NBRC 15463 = NRRL

B-16381 = VKM Ac-1292.

Streptomyces virginiae Grundy et al. 1952 emend.

S50

Thermocrispum agreste Korn-Wendisch et al. 1995


Type strain: ATCC 51797 = CHB-77 = DSM 44070 =

JCM 9705 = NBRC 15805.

Thermocrispum municipale Korn-Wendisch et al.



= MKD-35 = NBRC 15806.

Thermoleophilum album Zarilla and Perry 1986


Type strain: HS-5 = ATCC 35263.

Thermomonospora curvata Henssen 1957 emend.



43183 = HAMBI 1549 = JCM 3096 = NBRC

15933.

Thermostaphylospora chromogena (McCarthy and

Cross 1984) Wu et al. 2018 emend. Nouioui et al.

2018*

Type strain: 577 = ATCC 43196 = DSM 43794 = JCM

6244 = NBRC 16096 = NCIB 10212 = NCIMB

10212 = NRRL B-16983.

Tomitella biformata Katayama et al. 2010 emend.


Type strain: AHU 1821 = DSM 45403 = NBRC

106253.

Trueperella bernardiae (Funke et al. 1995) Yassin et


Type strain: LCDC 89-0504 = ATCC 51727 = CCUG

33419 = CIP 104252 = DSM 9152 = LMG 18721.

Tsukamurella carboxydivorans Park et al. 2009


Type strain: Y2 = DSM 45557 = JCM 15482 =

KCCM 42885.

Tsukamurella paurometabola corrig. (Steinhaus

1941) Collins et al. 1988 emend. Nouioui et al. 2018*


100753 = DSM 20162 = JCM 10117 = NBRC

16120 = NCTC 13040.

Tsukamurella spongiae Olson et al. 2007 emend.


Type strain: K362 = DSM 44990 = JCM 14882 =

NRRL B-24467.

Tsukamurella sunchonensis Seong et al. 2008


Type strain: SCNU5 = DSM 45335 = JCM 15929 =

KCTC 9827 = NRRL B-24668.

Umezawaea tangerine (Kinoshita et al. 2000) Labeda

and Kroppenstedt 2007 emend. Nouioui et al. 2018*

Type strain: MK27-91F2 = DSM 44720 = JCM 10302

= NBRC 16184 = NRRL B-24463.

Varibaculum cambriense corrig. Hall et al. 2003



DSM 15806.

Williamsia deligens Yassin and Hupfer 2006 emend.



44902 = JCM 13662.

Williamsia maris Stach et al. 2004 emend. Nouioui et al. 2018*

Type strain: SJS0289-JS1 = DSM 44693 = JCM

12070 = NCIMB 13945.

Williamsia serinedens Yassin et al. 2007 emend.


Type strain: IMMIB SR-4 = CCUG 53151 = DSM

45037 = JCM 14883.

Williamsia sterculiae Fang et al. 2013 emend.


Type strain: CPCC 203464 = DSM 45741 = KCTC

29118.

Xylanimicrobium pachnodae (Cazemier et al. 2004)

Stackebrandt and Schumann 2004 emend. Nouioui

et al. 2018*

Type strain: VPCX2 = DSM 12657 = JCM 13526 =

KACC 19382 = NCCB 100020.

Yaniella halotolerans (Li et al. 2004) Li et al. 2008



JCM 13527 = YIM 70085.

Zimmermannella alba Lin et al. 2004 emend.


Type strain: CCUG 50212 = IAM 14724 = JCM

12865 = NBRC 15616 = TISTR 1510.

S51

EMENDATION OF SUBSPECIES

*References of emendations by Nouioui et al. 2018 are ‘Front Microbiol., 2018, 9: 2007’ and ‘List of changes in

taxonomic opinion no. 29 [IJSEM, 2019, 69: 13–32] (LCTO no. 29)’.

Bifidobacterium longum subsp. suis (Matteuzzi et al.

1971) Mattarelli et al. 2008 emend. Nouioui et al.

2018*

Type strain: SU 859 = ATCC 27533 = BCRC 14671 =

CCRC 14671 = CCUG 35234 = CIP 103377 =

DSM 20211 = HAMBI 1381 = JCM 1269 = LMG

11598.

Cutibacterium acnes subsp. acnes (Gilchrist 1900)

Nouioui et al. 2018 emend. Dekio et al. 2019

Type strain: ATCC 6919 = BCRC 10723 = CCUG

1794 = CECT 5684 = CGMCC 1.5003 = CIP

53.117 = DSM 1897 = JCM 6425 = KCTC 3314 =

KCTC 5008 = LMG 16711 = LMG 3591 = NCTC

737 = NBRC 107605 = NRRL B-4224 = VKM Ac-

1450 = VPI 0389.

Ref.: IJSEM, 2019, 69: 1087–1092.

Cutibacterium acnes subsp. defendens (McDowell et

al. 2016) Nouioui et al. 2018 emend. Dekio et al.

2019

Type strain: ATCC 11828 = CCUG 6369 = JCM 6473.

Ref.: IJSEM, 2019, 69: 1087–1092.

Mycobacterium abscessus subsp. bolletii (Adécambi

et al. 2006) Leao et al. 2011 emend. Nouioui et al. 2018*

Type strain: BD = CCUG 50184 = CIP 108541 =

DSM 45149 = JCM 15297.

Ref.: Front Microbiol., 2018: 9: 2007; LCTO no. 29.

Mycobacterium abscessus subsp. massiliense Toroli



45103 = JCM 15300 = KCTC 19086.

SYNONYM

**References of synonyms marked with a double asterisk are ‘Front Microbiol., 2018, 9: 2007’ and ‘List of

changes in taxonomic opinion no. 29 [IJSEM, 2019, 69: 13–32] (LCTO no. 29)’.

Actinomadura viridilutea (Agre and Guzeva 1975)

Zhang et al. 2001 emend. Nouioui et al. 2018 pro

synon. Actinomadura rubrobrunea (ex

Krasil'nikov et al. 1968) Kroppenstedt et al.

1991**

Alloactinosynnema Yuan et al. 2010 emend. Nikou et

al. 2014 pro synon. Actinokineospora Hasagawa et al. 1988 emend. Nouioui 2018**

Amycolatopsis keratiniphila subsp. nogabecina

Wink et al. 2003 pro synon. Amycolatopsis

keratiniphila subsp. keratiniphila (Al-Musallam et

al. 2003) Wink et al. 2003**

Asaccharobacter Minamida et al. 2008 pro synon.

Adlercreutzia Mauro 2008**

Bifidobacterium coryneforme (ex Scardovi and


et al. 2018 pro synon. Bifidobacterium indicum

Scardovi and Trovatelli 1969**

Bifidobacterium stercoris Kim et al. 2010 emend.

Nouioui et al. 2018 pro synon. Bifidobacterium

adolescentis Reuter 1963**

Cellulosimicrobium aquatile Sultanpuram et al. 2016

pro synon. Cellulosimicrobium funkei Brown et al. 2006**

Corynebacterium seminale Riegel et al. 1996 emend.

Nouioui et al. 2018 pro synon. Corynebacterium

glucuronolyticum Funke et al. 1995**

Dietzia cinnamea Yassin et al. 2006 emend. Nouioui

et al. 2018 pro synon. Dietzia maris (Nesterenko et

al. 1982) Rainey et al. 1995 emend. Nouioui et al.

2018**

Enterorhabdus Clavel et al. 2009 emend. Clavel et

al. 2010 pro synon. Adlercreutzia Mauro 2008**

Falcivibrio vaginalis Hammann et al. 1984 emend.

Nouioui et al. 2018 pro synon. Mobiluncus curtisii

subsp. holmesii Spiegel and Roberts 1984**

Friedmanniella Schumann et al. 1997 pro synon.

S52

Microlunatus Nakamura et al. 1995 emend.

Nouioui et al. 2018**

Gordonibacter faecihominis Jin et al. 2015 pro

synon. Gordonibacter urolithinfaciens Selma et al.

2014

Ref.: IJSEM, 2019, 69: 2527–2532.

Kitasatoa kauaiensis Matsumae et al. 1968 emend.

Nouioui et al. 2018 pro synon. Kitasatoa purpurea

Matsumae et al. 1968**

Koreibacter algae Lee and Lee 2010 emend. Nouioui

et al. 2018 pro synon. Paraoerskovia marina Khan

et al. 2009 emend. Schumann et al. 2013**

Lechevalieria Labeda et al. 2001 emend. Zhao et al. 2017 pro synon. Lentzea Yassin et al. 1995**

Lysinimicrobium Hamada et al. 2012 emend.

Hamada et al. 2015 pro synon. Demequina Yi et al.

2007 emend. Nouioui et al. 2018**

Micrococcus aloeverae Prakash et al. 2014 pro

synon. Micrococcus luteus (Schroeter 1872) Cohn

1872

Ref.: IJSEM, 2019, 69: 3512–3518.

Micrococcus yunnanensis Zhao et al. 2009 pro

synon. Micrococcus luteus (Schroeter 1872) Cohn

1872

Ref.: IJSEM, 2019, 69: 3512–3518.

Mycobacterium bouchedurhonense Ben Salah et al.

2009 emend. Nouioui et al. 2018 pro synon.

Mycobacterium avium subsp. avium (Chester

1901) Thorel et al. 1990**

Mycobacterium paraintracellulare Lee et al. 2016

emend. Nouioui et al. 2018 pro synon.

Mycobacterium intracellulare (Cuttino and

McCabe 1949) Runyon 1965 emend. Castejon et al.

2018**

Mycobacterium vanbaalenii Khan et al. 2002

Nouioui et al. 2018 pro synon. Mycobacterium

austroafricanum Tsukamura et al. 1983 emend.


Mycobacterium yongonense Kim et al. 2013 pro

synon. Mycobacterium chimaera Tortoli et al. 2004**


et al. 2018 pro synon. Nocardia cummidelens

Maldonado et al. 2001**


et al. 2018 pro synon. Nocardia salmonicida (ex

Rucker 1949) Isik et al. 1999**

Nocardioides simplex (Jensen 1934) O'Donnell et al.


Pimelobacter simplex (Jensen 1934) Suzuki and

Komagata 1983**

Nocardiopsis baichengensis Li et al. 2006 pro synon.

Nocardiopsis halophila Al-Tai and Ruan 1994

emend. Nouioui et al. 2018**

Oerskovia xanthineolytica Lechevalier 1972 emend.

Nouioui et al. 2018 pro synon. Cellulosimicrobium

cellulans (Metcalf and Brown 1957) Schumann et al. 2001**

Parvibacter Clavel et al. 2013 pro synon.

Adlercreutzia Mauro 2008**

Prauserella flava Li et al. 2009 pro synon.

Prauserella salsuginis Li et al. 2009**

Rhodococcus enclensis Dastager et al. 2014 emend.

Nouioui et al. 2018 pro synon. Rhodococcus

qingshengii Xu et al. 2007 emend. Nouioui et al. et al. 2018**

Rhodococcus enclensis Dastager et al. 2014 emend.

Nouioui et al. 2018 pro synon. Rhodococcus

qingshengii Xu et al. 2007 Nouioui et al. 2018**

Rhodococcus equi (Magnusson 1923) Goodfellow

and Alderson 1977 emend. Nouioui et al. 2018 pro

synon. Corynebacterium hoagii (Morse 1912)

Eberson 1918**

Saccharomonospora viridis (Schuurmans et al. 1956)

Nomomura and Ohara 1971 emend. Nouioui et al.

2018 pro synon. Micropolyspora internatus Agre

et al. 1974**

Saccharopolyspora jiangxiensis Zhang et al. 2009

pro synon. Saccharopolyspora hirsuta subsp.

kobensis (ex Iwasaki et al. 1979) Lacey 1989**

Sanguibacteraceae Stackebrandt and Schumann 2000

emend. Pikuta et al. 2017 pro synon. Jonesiaceae

Stackebrandt et al. 1997**

S53

Streptomyces avellaneus Baldacci and Grein 1966

pro synon. Streptomyces aureofaciens Duggar

1948 emend. Groth et al. 2003**

Streptomyces californicus (Waksman and Curtis

1916) Waksman and Henrici 1948 emend. Nouioui

et al. 2018 pro synon. Streptomyces puniceus

Patelski 1951**

Streptomyces ciscaucasicus Gause et al. 1986 emend.

Nouioui et al. 2018 pro synon. Streptomyces canus

Heinemann et al. 1953 emend. Nouioui et al.

2018**

Streptomyces citreofluorescens (Korenyako et al.

1960) Pridham 1970 emend. Nouioui et al. 2018

pro synon. Streptomyces anulatus (Beijerinck

1912) Waksman 1953 emend. Lanoot et al. 2005**

Streptomyces emeiensis Sun et al. 2007 emend.

Nouioui et al. 2018 pro synon. Streptomyces

prasinopilosus Ettlinger et al. 1958 emend. Labeda

et al. 2016**

Streptomyces floridae Bartz et al. 1951 emend.


californicus (Waksman and Curtis 1916) Waksman

and Henrici 1948**

Streptomyces floridae Bartz et al. 1951 emend.


puniceus Patelski 1951**

Streptomyces fluorescens (Krasil'nikov 1958)

Pridham 1970 emend. Nouioui et al. 2018 pro

synon. Streptomyces anulatus (Beijerinck 1912)

Waksman 1953 emend. Lanoot et al. 2005**

Streptomyces fluorescens (Krasil'nikov 1958)

Pridham 1970 emend. Nouioui et al. 2018 pro

synon. Streptomyces citreofluorescens (Korenyako

et al. 1960) Pridham 1970**

Streptomyces ghanaensis Wallhäusser et al. 1966


Streptomyces viridosporus Pridham et al. 1958

emend. Goodfellow et al. 2017**

Streptomyces griseolus (Waksman 1923) Waksman

and Henrici 1948 emend. Nouioui et al. 2018 pro

synon. Streptomyces halstedii (Waksman and

Curtis 1916) Waksman and Henrici 1948 emend.


Streptomyces mobaraensis Witt and Stackebrandt


Streptoverticillium mobaraense (Nagatsu and

Suzuki 1963) Locci et al. 1969**

Streptomyces ochraceiscleroticus Pridham 1970

emend. Nouioui et al. 2018 pro synon. Chainia

ochracea Kuznetsov 1962**

Streptomyces phaeopurpureus Shinobu 1957 emend.


griseorubiginosus (Ryabova and Preobrazhenskaya

1957) Pridham et al. 1958 emend. Nouioui et al.

2018**

Streptomyces sclerotialus Pridham 1970 emend.

Nouioui et al. 2018 pro synon. Chainia antibiotica

Thirumalachar 1955**

Streptomyces spheroides Wallick et al. 1956 emend.


caeruleus (Baldacci 1944) Pridham et al. 1958


Streptomyces niveus Smith et al. 1956**

Streptomyces sporocinereus (ex Krasil'nikov 1970)

Preobrazhenskaya 1986 emend. Nouioui et al. 2018

pro synon. Streptomyces hygroscopicus subsp.

hygroscopicus (Jensen 1931) Waksman and Henrici

1948 emend. Komaki et al. 2017**

Tsukamurella carboxydivorans Park et al. 2009


Tsukamurella tyrosinosolvens Yassin et al. 1997

emend. Teng et al. 2016**

Tsukamurella spongiae Olson et al. 2007 emend.

Nouioui et al. 2018 pro synon. Tsukamurella

pulmonis Yassin et al. 1996 emend. Teng et al.

2016**

Tsukamurella sunchonensis Seong et al. 2008


Tsukamurella pseudospumae Nam et al. 2004

emend. Teng et al. 2016**

Yuhushiella Mao et al. 2011 pro synon.

Amycolatopsis Lechevalier et al. 1986 emend.


S54

Cancelation of the 2020 Annual Meeting

of the Society for Actinomycetes Japan (SAJ)

Chairperson of the Board of Directors

Tohru Dairi (Hokkaido University)

The 2020 (35th) annual meeting of SAJ (SAJ35) scheduled from 10th September 2020 in Fukui

has been cancelled due to ongoing threat of COVID-19.

The SAJ board of directors and the SAJ35 Organizing Committee have been discussing whether

the meeting can be held as usual. However, ‘three Cs’ (closed spaces, crowded places, and close-

contact settings) are inevitable in poster session, a usual presentation style in the annual meeting. As

an alternative, we also explored the possibility that all applied subjects will be presented by oral

presentations, but we are unable to reserve appropriate rooms. For these reasons, we decided to cancel

the SAJ35 meeting.

However, “the SAJ General Meeting” and “Award Lectures” will be held by an online style on

10th September 2020. We would be grateful if the SAJ members positively participate in the events.

The details will be announced by SAJ News Mail as well as on our Web site.

S55

Online access to The Journal of Antibiotics for SAJ members

Eligible members of SAJ can access to online issues of The Journal of Antibiotics (JA) by taking

following steps;

1. Open the SAJ official website (URL: http://www.actino.jp/) and click the banner of JA.

2. To register, enter your Membership number (10-digit figures starting with 154), First name, Last

name, and E-mail address to receive a password and click 'Send'. You can find your Membership

number on the envelope from SAJ.

3. Then, you will receive your password from SAJ.

4. Open the SAJ official website (URL: http://www.actino.jp/) and click the banner of JA again. To

access the JA website, enter Membership number and password and click 'Login'.

5. Upon recognition of Membership number and password, SAJ site relays the access to the journal's

website on nature.com

6. In the journal's website on nature.com, contents are freely available. Members can find the article

from current issue table of contents, or archive issues list. Click 'PDF' or 'HTML' link of each article

to read full contents.

Please note;

Unique set of Membership number and password is issued and provided to each eligible members

of SAJ. Members are not allowed to distribute this information to the third person or third parties.

Depending on the network environment there's a case where access to full contents is not

permitted even though Membership number and password is correct. In such case please contact us

by email for alternative access method. When contacting please provide your membership number and

password, and specify name and version of your Internet browser.

RBA Helpdesk - The Journal of Antibiotics

E-mail : [email protected]

日本放線菌学会誌

会報

第 34 巻 1 号

1

目次

巻頭言「非日常への備え」･･････････････････････････････････････････････････････2

2019 年に正式発表された放線菌学名一覧について･･･････････････････････････････････3

受賞論文のお知らせ････････････････････････････････････････････････････････････4

沖俊一先生を偲んで･････････････････････････････････････････････････････････5

2018 年度浜田賞受賞論文（福本敦博士）･･････････････････････････････････････････9

2020 年度（第 35 回）日本放線菌学会大会中止のお知らせ････････････････････････････16

2020 年度日本放線菌学会四賞授賞者の決定について････････････････････････････････17

日本放線菌学会賛助会員････････････････････････････････････････････････････････18

著作権について････････････････････････････････････････････････････････････････18

2

巻頭言

非日常への備え

この度、日本放線菌学会の会長を拝命することになりました。微力ながら会の発展に取り

組んで参りますので、ご協力の程、宜しくお願い申し上げます。新体制のスタートは、新型

コロナウイルスの影響で異例尽くめでした。新旧理事会を開催し早川会長からの引継ぎを

予定していましたが、緊急事態宣言により全てメール会議になりました。また、2020 年度

の大会を福井で開催するための準備を進めてきましたが（大会長濱野吉十先生）、現時点

で開催可能か見通せない状況です。さらに、日本の微生物由来の天然物研究を高く評価され、

日本放線菌学会にご尽力いただいた、本会名誉会員の Arnold L. Demain 先生が、新型コロナ

ウイルスに感染されご逝去されたという一報が届きました。謹んで哀悼の意を表しますと

共に、ご冥福を心よりお祈り申し上げます。

新型コロナウイルスの影響は凄まじく日々の生活を一変させ、大学の授業もオンライン

になりました。これまでも e-learning コンテンツを準備するように要請がありましたが、卒

論を手書きで提出した世代の筆者にとっては e-learning といわれてもピンとこず、特に準備

をすることもなく今日に至りました。その付けが回り、新年度早々オンライン授業のための

WEB 講習会への参加や専用システムの使い方の習得と六十の手習いが続いています。つく

づく、常日頃から非常事態に備えることの大切さを痛感しました。

世間を混乱に落とし込めている新型コロナウイルス撲滅のためには、ワクチン開発が必

須と思われますが時間がかかります。他方、合成低分子化合物であるレムデシビルやアビガ

ンが有効であるという報道もなされています。天然物に目を向けると、最近発表された論文

では（Journal of Natural Products, 2020, 83, 3, 770-803）、過去 40 年に開発された抗ウイルス

剤の 6％が天然物由来の半合成品であり、天然物の基本骨格を利用した合成品も加えると

27％にもなります。また、近年上市された全薬剤の 10％が天然物由来の半合成品であり、

天然物の基本骨格を利用した合成品も加えると 20％を超えています。このように、依然天

然物は医薬品資源として重要な位置を占めています。また新型コロナウイルス以外にも、エ

ボラ出血熱、SARS、MERS などの新興感染症や、デング熱、ジカ熱、結核に代表される再

興感染症も大きな問題となっていることから、安価で大量供給できる低分子薬剤の果たす

役割は大きいと考えられます。したがって、それらの主要な生産者の一つである放線菌に関

する研究も必要不可欠であると言えます。近年、抗体医薬に代表される高分子医薬品が注目

され、天然物研究が特に製薬企業において縮小されていると耳にします。しかし今回の新型

コロナウイルス危機を契機として、再度、天然物研究が活性化され、本会が益々発展してい

くことを祈念します。

2020 年 5 月 11 日

日本放線菌学会会長大利徹

（北海道大学大学院工学研究院）

3

2019 年に正式発表された放線菌学名一覧について

日本放線菌学会の菌株基準委員会では、毎年 Actinomycetologica 第 1 号で前年中にInternational Journal of Systematic and Evolutionary Microbiology（Int J Syst Evol Microbiol., IJSEM）誌上で正式発表された放線菌の学名を紹介しており、本年度も SAJ News に「List of new

scientific names and nomenclatural changes in the phylum Actinobacteria validly published in 2019」として掲載しました（S3～S53）。

昨年は、1 科・17 属・140 種・2 亜種が承認されました。また、再分類により 11 種・１亜種が他の属に移行しました。これに伴う学名変更を new combination として掲載しています。移行前の学名がバソニム（basonym）です。例えば、Jishengella endophytica と J. zingiberis はMicromonospora属に移行し、それぞれM. endophyticaとM. zingiberisになりました。Jishengella

属にはこれら 2 種しか含まれていなかったので、Jishengella 属が消滅し、Micromonospora 属に含まれました。

Emendation とは、その分類群を定義している性質の記載（description）が追記・修正されたことを意味します。昨年は emendation の数が多く、その多くは Nouioui らの報告（Front

Microbiol., 2018, 9: 2007）によるものです。それによる種の emendation の殆どは基準株の G+C

含量・ゲノムサイズ・BioSample のアクセッション番号の追記で、菌の性質は修正していません。

異なる学名で承認されていたものが同じである場合、それらをシノニム（synonym）と呼びます。例えば、昨年は Mycobacterium paraintracellulare と M. intracellulare がシノニムの関係にあることが認められました。つまり、M. paraintracellulare と M. intracellulare は同種です。学名としては、より古い M. intracellulare が優先されます。

「List of new scientific names and nomenclatural changes in the phylum Actinobacteria validly

published in 2019」では、以下の表の項目順に 2019 年に正式発表された放線菌の学名一覧を掲載しています。ページ節約のため、IJSEMやRef.など一般的な略語に加え特殊な略語LCTO

（List of changes in taxonomic opinion）・VL（Validation List）とそれらの番号表記（Abbreviations

参照）、emendation や synonym のリスト中ではアスタリスク表記による指定を行い、reference

の短縮化を図っています。

正式発表数 2017年 2018年 2019年

New order 0 2 0 New family 6 8 1 New genus 15 29 17 New species 168 151 140 New subspecies 1 20 2 New combination 16 212 12 New nomenclature 0 5 0 Emendation of class 0 0 1 Emendation of order 0 0 5 Emendation of family 2 1 19 Emendation of genus 8 6 28 Emendation of species 17 24 678 Emendation of subspecies 0 0 5 Synonym 7 6 57

合計 240 464 964

令和 2 年 6 月菌株基準委員会

4

受賞論文掲載のお知らせ

2018 年度日本放線菌学会浜田賞受賞

福本敦博士

東邦大学薬学部

「放線菌により産生される細菌感染を制御するための化合物の探索」

Hamada award 2018

Dr. Atsushi Fukumoto

Faculty of Pharmaceutical Sciences, Toho University

"Screening for novel bacterial infection control compounds from actinomycetes"

日本放線菌学会誌 vol. 34 no.1, 9-14, 2020

5

沖俊一先生を偲んで

沖俊一先生は，2019 年 4 月 11 日に誤嚥性肺炎が原因でご急逝されました。

先生は，1935 年 1 月 24 日に第一子として東京でお生まれになりました。10 歳の頃，御

父上の仕事の都合で兵庫へ家族で移られ，その後の青年期を地方で暮らすこととなりまし

た。その間，先生は丸山工作博士（京都大学教授，筋肉のモータータンパク質ミオシンを発

見した生化学者）と出会う機会がありました。「俊一君，あの蜂が何故敏捷に飛び回るのか

不思議に思わないかい。」その一言に深く感化され，科学の道へ進む決心をしました。兵庫

県立龍野高校を卒業後，1953 年には京都大学に入学し，農芸化学を専攻しました。卒業論

文のテーマとして二年間取り組んだ「藻類の生育に対するモリブデンの影響」の研究は，ご

自身のその後の大きな支えになったと伺っています。

大学卒業後，三楽酒造株式会社（のちのメルシャン株式会社）に入社し，熊本県の八代

工場でアミノ酸発酵を担当しました。その当時，L-グルタミン酸発酵の過程で雑菌汚染が問

題となっていましたが，先生は根気強く観察と実験を続けることで，その原因がブレビバク

テリウムへのファージ感染による溶菌であることを突き止めました。この重要な発見は，先

生の学位論文に，さらには農芸化学奨励賞へと結びつきました。

その後，会社の方針で癌分野の研究を開始することとなり，1969 年から 1972 年までウ

ィスコンシン大学 McArdle 癌研究所にて Charles Heidelberger 博士のもとで研究する機会に

恵まれました。Heidelberger 博士は抗癌剤 5-フルオロウラシルの開発者であり，先生は腫瘍

学に関する幅広い知識と実験技術を身に付け，帰国しました。それから間もなく，微生物化

学研究所の梅澤濱夫先生から呼び出され，抗癌剤の開発に挑戦しないかと誘いを受けまし

6

た。その頃，イタリアではアドリアマイシンとダウノマイシンが既に開発され，さまざまな

固形癌での優れた治療効果が認められていましたが，心毒性などの副作用が問題視されて

いました。そこで先生は，副作用の少ない抗癌剤を開発するべく，それらの化合物がアンス

ラサイクリン母核に起因する鮮やかな赤色を呈することに着目し，さまざまな色調の放線

菌コロニーを土壌から分離し，一つ一つ抗癌活性を調べました。その中から選抜した黄色色

素を生産する Streptomyces 株から，新規アンスラサイクリン系抗癌剤アクラシノマイシン

（アクラルビシン）が発見されました。アクラシノマイシンは，優れた抗腫瘍活性を持ちな

がらも，副作用が軽減されており，白血病など複数の種類の癌に対する抗癌剤として実用化

されました。さらに，梅澤先生の研究室とメルシャンとが協力して誘導体合成を行い，THP-

アドリアマイシン（ピラルビシン）が開発されました。これら二つのアンスラサイクリン抗

癌剤は，癌化学療法で大いに力を発揮しました。自然界の物質から薬をつくりたい，という

先生の夢が実現された瞬間でした。

三楽オーシャンでの抗癌剤開発を成功させ，先生は台糖ファイザー（のちのファイザー

製薬）に新薬開発センター所長として移られました。そこでは，β-ラクタム系やアゾール系

の抗生物質，抗癌剤や抗不安薬など多数の医薬品を開発し，世の中へ送り出しました。さら

に，ブリストル・マイヤーズ（株）の東京研究所（のちのブリストル・マイヤーズスクイ

ブ）に招聘され，研究所長になられました。当時の東京研究所の研究成果は目を見張るもの

があり，沖先生の指揮のもと，多数のさまざまな有用生理活性物質が微生物から発見され，

学会誌上へと発表されていきました。私自身も同じ分野の研究をしておりましたので，それ

らの研究成果に驚嘆しながらも，その時には，よもや将来，先生と一緒にお仕事をさせてい

ただくことになろうとは夢にも思っていませんでした。東京研究所で発見された物質は，い

ずれも分子構造が新奇で，生理活性が顕著なものが多く，ダイネミシン，プラジミシン，テ

ルペスタチンなど，さまざまな物質が医薬候補化合物として注目され，世界中の科学者たち

が全合成や生合成研究に取り組むこととなりました。とりわけ先生が興味をもっておられ

た化合物が，Actinomadura から発見されたプラジミシンでした。この化合物は，マンノース

糖鎖に特異的に結合することにより抗真菌活性や抗ウイルス活性を示す，抗生物質として

は前例のない作用メカニズムをもつものでした。その後，中川優先生（名古屋大学准教授）

がマンノース認識メカニズムの全貌解明に成功し，プラジミシンは新たな創薬リードとし

て注目されています。

1994 年に京都大学名誉教授の山田秀明先生に招かれて，沖先生は富山県立大学生物工学

研究センターの教授として学問の世界へ戻りました。これは先生にとって新たな挑戦でし

たが，富山での日々を存分に楽しまれたに違いありません。意識的に自らを新しい環境に置

き，新たな課題に取り組むことが，先生のモットーでした。研究室の立ち上げに際しては，

古米保先生を助教授に，私を助手に招き，国内外の企業や研究機関と連携して，富山の多様

な環境の放線菌から有用生理活性物質を探索しました。

私が先生に初めてお会いしたのは，ジョンズ・ホプキンス大学でポスドクをしていた時

7

のことでした。渡米して一年程経った某日，日本人研究者によるセミナーが私の所属研究室

の近くで行われました。セミナーの後，同じ日本人ということで，主宰の教授から沖先生と

のランチに招かれ，その日の午後は私が先生をお連れしてボルチモアを案内することとな

りました。いろいろな会話をするうちに，先生が富山で研究室を立ち上げたところで，助手

として来ないか，とお誘いを受けました。その晩，連絡先を交換したときには，先生のご自

宅と私の実家が徒歩 10 分の近所であることを知り，お互いに驚きました。先生とは何か不

思議なご縁があったのかもしれません。先生と出会えた幸運に感謝するばかりです。

さて，話を戻して，沖先生が立ち上げた研究室の名称は「有用生物探索工学」という斬

新かつ個性的なものであり，私が着任した 1996 年 4 月は，研究員として梶浦貴之（味の素），

大学院修士課程 1 年生として濱野吉十（福井県立大学教授）の両氏が研究室に加入した時で

もありました。また，大利徹先生（北海道大学教授）が同センターに一足早く着任されてい

ました。同年六月には，放線菌学会大会が宇奈月にて開催されました。沖先生が大会長とし

て企画した大会と盛大な懇親会は，放線菌学会員の間では今でも伝説として語り草になっ

ています。

研究室が安定して運営されるようになると，1998 年に玉川大学学術研究所の教授として

横浜のご自宅にお戻りになりました。また玉川大学では 2001 年に学術研究所応用生命科学

研究施設の特任教授に任命されました。この間，2000 年から 2003 年にはトランスレーショ

ナルリサーチ（株）の代表取締役社長を，2006 年から 2009 年には東レ経営研究所特別研究

員をお務めになりました。さらに 2000 年からは南カリフォルニア大学薬学部 Keck School

の非常勤研究教授，2004 年からは横浜市立大学大学院国際総合科学研究科及び医学研究科

の客員教授を兼任されました。先生の豊富なご経験と見識ゆえ，国内外の多数の製薬系・化

学系企業で顧問，アドバイザーをお務めになりました。先生が発明人として含まれる特許は

100 件以上出願されており，先生が著者として含まれる研究論文は 300 編以上も発表されて

います。加えて，日本抗生物質学術協議会の学会誌 The Journal of Antibiotics の編集委員を

1986 年から 1991 年まで，評議員を 1992 年から 2004 年まで，そして学術委員を 2004 年か

ら 2019 年までお務めになりました。2001 年には，日本放線菌学会功績功労賞をご受賞して

います。

先生は「セレンディピティ」という言葉がお好きでした。先生が遺したご業績はまさし

くその言葉により具現化されています。しかし，先生は現状に満足することなく，常にセレ

ンディピティを追い求めておられました。先生は人一倍の努力家であると同時に，心優しき

指導者であり，また家族思いの夫・父でありました。先生を失ったことは，ご家族にとって

はもちろんのこと，先生から薫陶を受けた私たち放線菌研究者にとっても，筆舌し難い悲し

みです。先生は，数年前に奥様に先立たれ，深い悲しみのうちに晩年を過ごされていました

が，最近はお子さんやお孫さんと共有する時間を楽しみに，心穏やかに生活されていたとの

ことです。

沖先生は 80 歳の時，極めて個人的かつ内省的な自伝を家族に残しています。その当時，

8

奥様は心臓を患いながらもご存命でした。その自伝の最後に，「東京で開催される予定の

2020 年オリンピック・パラリンピックをテレビで妻と二人揃って観戦したいと願っている。」

と記されていました。その願いが叶うことのなかった今，先生と苦楽を共にした日本放線菌

学会の同輩，そして後輩一同より，ご遺族の皆様に心からご冥福お祈り申し上げます。

1996 年 5 月頃，残雪の穂高を研究室メンバーと散策。

左から，沖先生，濱野，梶浦，五十嵐，野村，平本

執筆を終えて

この追悼文の執筆にあたり，沖先生のご息女，千島和子さんから先生がご家族あてにした

ためた「80 歳を前にして」と題する自伝をご提供いただきました。また，メルシャン時代

の抗癌剤開発にまつわる詳しい情報を西田浩史さんから，玉川大学時代の資料を奥田徹先

生から，沖先生の経歴に関する資料を古米保先生からご提供いただきました。昨年の春から

季節は巡り，沖先生の一周忌を先日お迎えいたしました。改めて先生のご冥福をお祈りする

とともに，これまでのご指導に深く感謝申し上げます。

2020 年 4 月 20 日

富山県立大学工学部生物工学科

微生物工学研究室

教授五十嵐康弘

9

2018 年度浜田賞受賞論文

放線菌により産生される細菌感染を制御するための化合物の探索

福本敦

東邦大学薬学部

〒274-8510 千葉県船橋市三山 2-2-1

Screening for novel bacterial infection control compounds from actinomycetes

Atsushi Fukumoto

Faculty of Pharmaceutical Sciences, Toho University

Miyama 2-2-1, Funabashi, Chiba 274-8510

1．はじめに

歴史上初めての抗生物質は、1928 年にフ

レミングが糸状菌の培養液から発見した β-

ラクタム系抗生物質のペニシリンである。

それ以降、今日までに様々な抗生物質が放

線菌・糸状菌などの微生物培養物より発見

され、また化学的合成によって作られてき

た。しかし、薬剤の開発にともない菌の薬剤

耐性も進化してきている。例えば、黄色ブド

ウ球菌は本来ペニシリンに感受性であった

が、ペニシリンが 1940 年以降使われはじめ

るとペニシリンを分解する酵素である β-ラ

クタマーゼを獲得した菌株が出現している。

さらに 1960 年になってメチシリンが開発

されたが、その翌年にはメチシリン耐性の

黄色ブドウ球菌であるMRSAがイギリスで

出現している 1。その後も、新しい抗生物質

が登場するたびに薬剤耐性菌も出現してお

り、耐性菌治療のために新規な薬剤の開発

を続けなければならないというジレンマに

陥っている。

そのような悪循環から脱出するため単な

る抗菌活性に頼らない新しい感染症治療方

法の開発がいくつか試みられてきた。

一つは、細菌の薬剤耐性機構のみを阻害

する薬剤の開発である。これまでの抗生物

質は、より抗菌スペクトルが広く、低濃度で

効果を示し、毒性が少ないことが目指され

てきた。しかしながらこのような戦略だけ

では耐性菌が生じてしまう問題がある。細

菌の耐性機構を標的にすることで標的とし

ない他の細菌には影響を与えず、また既存

の抗生物質も組み合わせて使用することが

できるという利点がある。このようなコン

セプトは、大村らによって提唱もされてい

る 2。

10

もう一つは、細菌の増殖に影響を与えず

に病原性を抑える方法である。細菌の病原

因子の多くは情報伝達機構である quorum

sensing 機構によって発現が制御されている。

Quorum sensing 機構は微生物間同士の情報

伝達機構であり、菌と菌とが情報伝達を行

い遺伝子発現を調節する機構である 3。本機

構によりバイオフィルムの形成、毒素や色

素の産生等の病原性に関する遺伝子の発現

がコントロールされている 4,5。一方、本機

構を阻害した場合でも他の抗菌剤とは異な

り細菌の増殖は阻害されない。よって、これ

までの抗生物質のような耐性菌のみが残存

することはないと考えられる 6。グラム陰性

菌では本機構は種を超えてある程度共通に

機能することが明らかとなっており、本機

構をターゲットとした薬剤を開発すること

で病原性グラム陰性細菌によるバイオフィ

ルム形成や毒素産生型感染症等の様々な臨

床問題が解決される可能性が高いと考える。

細菌の数を変化させずに病原性を無くすよ

うな薬剤が臨床応用されれば感染症治療の

概念が変わるのではないかと考えられるが、

このような機構を標的とした感染症治療薬

はまだ臨床現場では使用されていない。

これら 2 種類の機構の阻害剤の探索につ

いて報告をする。

2．MRSA の耐性機構を阻害する薬剤の探索

薬剤耐性菌の耐性機構を標的とした阻害

剤の探索の一例として、MRSA の β-ラクタ

ム剤耐性機構を標的とした新規薬剤の探索

を行った。

細菌の細胞壁ペプチドグリカンはペニシ

リン結合タンパク質（ penicillin-binding

protein, PBP）と呼ばれる酵素により合成さ

れる。ペニシリンをはじめとした β-ラクタ

ム剤は PBP に結合することで抗菌活性を示

す。黄色ブドウ球菌の場合、PBP は 4 種類

存在するが、メチシリン耐性黄色ブドウ球

菌（MRSA）では外来遺伝子 mecA にコード

される PBP2' を新たに獲得し合計 5 種類の

PBP を保有する 7。PBP2' は他の PBP に比

べ β-ラクタム剤との親和性が低いため

MRSA は β-ラクタム剤耐性となる。よって、

PBP2’を標的とした阻害剤は MRSA に対し

抗菌活性を示さないが、PBP2’阻害剤に暴露

されたMRSAは既存の β-ラクタム剤に対し

て感受性となり、既存の β-ラクタム剤との

併用により抗MRSA活性を示すことが期待

される。一方、メチシリン感受性黄色ブドウ

球菌（MSSA）を含むグラム陽性菌やグラム

陰性菌に対しては、PBP2’阻害剤は抗菌活性

を示さないと予想され、β-ラクタム剤と併

用した場合でも MSSA や他の菌種に対して

は β-ラクタム剤の活性は増強されないと考

えられる。

そのような考えに基づき、カルバペネム

系 β-ラクタム剤であるイミペネムの活性を

増強させる化合物の探索を行った。微生物

の培養液をはじめとした天然由来サンプル

を探索源とし、臨床分離株の MRSA K24 株

を用いてMRSAに対するイミペネムの活性

増強作用を指標にスクリーニングを実施し

た。イミペネムを非含有の培地では抗

MRSA 活性を示さず、イミペネムを MIC よ

りも低い濃度を含有した培地において抗

MRSA 活性を示すサンプルを選択した。

約 8000 サンプルのスクリーニングを行

った結果、沖縄県石垣島の土壌より分離さ

れた放線菌 Streptomyces sp. K04-0144株の培

養液がイミペネム増強活性を示すことを見

11

いだした。生産培養時の活性物質 cyslabdan

の生産は培養開始 1 日目から始まり、4～6

日目に生産量が高く、5 日目に最高値（2.3

µg/mL）を示した。

6 日間培養した 50 L の培養液を菌体と培

養上清とに分離し、培養上清を Diaion HP-

20 カラムに吸着させた。続いて、メタノー

ルを用いて Diaion HP-20 カラムから化合物

を溶出させ、水・酢酸エチル分配を行うこと

で水層画分 27.2 g を得た。得られた水層画

分の半量を ODS カラムにかけ、80%メタノ

ールの部分精製画分を 131.7 mg 得た。さら

に、ODS カラムを用いた HPLC により分取

し、得られた画分を Diaion HP-20 カラムを

用いて脱塩することにより、活性物質を白

色粉末として 17.1 mg 得た。

活性物質は NMR をはじめとした種々の

機器分析により構造が決定され、本化合物

は labdane 骨格を持つ diterpene に N-

acetylcysteine がチオエーテルを介して結合

した新規化合物であった（図 1）8。

図 1 Cyslabdan の構造

Cyslabdan のイミペネムの増強活性を確

認するために、まず本化合物自身の MRSA

K24株に対するMICを日本化学療法学会標

準法の微量希釈法 9 により求めたところ、

本化合物の MRSA K24 株に対する MIC は

64 µg/mL 以上であり、イミペネムの K24 株

に対する MIC は 32 µg/mLであった。一方、

K24 株の生育に影響を与えない濃度である

10 µg/mL の cyslabdan をイミペネムと併用

すると MIC は 0.03 µg/mL にまで低下し、非

併用時と比較してイミペネムの感受性は

1024 倍強くなった。単離された化合物のイ

ミペネムへの増強活性を確認できたため、

他の薬剤に対する増強活性について確認し

た。他の薬剤として、イミペネムと同じ β-

ラクタム系の薬剤 10 種と、β-ラクタム系薬

剤とは作用機作の異なる薬剤 4 種を用いた。

表 1 様々な抗菌剤に対する増強活性

抗生物質 Ratio*

ペニシリン系

Ampicillin 16

Penicillin 8

Cloxacillin 32

セフェム系

Cefazolin 8

Cefalexin 4

Cefotaxime 16

Cefmetazole 32

カルバペネム系

Imipenem 1024

Biapenem 512

Panipenem 1024

Meropenem 128

その他

Streptomycin 1

Vancomycin 1

Tetracycline 1

Ciprofloxacin 1

*: Cyslabdan 併用時と非併用時の MIC の比

12

Cyslabdan は供試した β-ラクタム系薬剤

に対して増強活性を示したが、β-ラクタム

系薬剤以外の薬剤（ストレプトマイシン、バ

ンコマイシン、テトラサイクリン、シプロフ

ロキサシン）では併用による増強活性は見

られなかった（表 1）10。また、β-ラクタム

系のうち、カルバペネム系（イミペネム、ビ

アペネム、パニペネム、メロペネム）に対

する増強活性はペネム系やセフェム系の β-

ラクタム剤に比較し強いことが明らかとな

った。

3．グラム陰性菌の quorum sensing 機構を

阻害する薬剤の探索

Quorum sensing 機構を阻害する物質を得

るために Chromobacterium violaceum CV026

株 11 を用いてスクリーニングを行った。本

菌株は quorum sensing が活性化されると紫

色色素 violaceine を生産する細菌である。そ

のためスクリーニングは簡便であり、培養

後の菌の色（紫、白）を肉眼的に区別するだ

けで quorum sensing 阻害活性をもつサンプ

ルを選別することができる。

本菌株を用いたスクリーニングにより福

島県の土壌から分離された Streptomyces sp.

TOHO-M025 株に活性を見出した。本菌株の

10L 培養液から水・酢酸エチル分配を行い、

酢酸エチル画分 966 mg を得た。続いてシリ

カゲルカラム、遠心分離、HPLC を行うこと

によって、活性物質として maniwamycin C

～F をそれぞれ 18.4 mg、5.6 mg、29.6 mg、

8.4 mg 得た。いずれの化合物も二次元 NMR

解析およびマススペクトル解析により新規

構造であることが明らかとなった。これら

の化合物は 15N-NMR および IR 測定の解析

よりアゾキシ基の存在が確認された（図 2）

12。放線菌からアゾキシ基を有する化合物の

単離報告はわずかしかなく、大変ユニーク

な発見であった。

R1 R2

maniwamycin C H OH

maniwamycin D H H

maniwamycin E H H

maniwamycin F CONH2 H

図 2 単離された maniwamycin 類の構造

Maniwamycin D および E の分子量は同じ

であり 2 次元 NMR により解析された平面

構造も同じであったが、HPLC におけるピ

ーク時間や NMR におけるケミカルシフト

がわずかに異なっていた。そこで旋光度を

測定し、類似化合物の文献値との比較を行

った。Maniwamycin C および D の比旋光度

はそれぞれ-38.6、-100.2 であった。一方、こ

れらの化合物と平面構造が同じであり絶対

立体配置が明らかな maniwamycin B

(2S,3S)13 および 2-epi- maniwamycin B

(2R,3S)14の比旋光度はそれぞれ+108、+35.4

であった（表 2）。よって、maniwamycin D お

よび E の絶対立体配置は(2S,3R)、(2R,3R)で

あると推定した。

表 2 Maniwamycin 類の比旋光度

[α]D

maniwamycin B (2S,3S ) +108..

2-epi-maniwamycin B (2R,3S ) +35.4

maniwamycin D (2S,3R ) -38.6

maniwamycin E (2R,3R ) -100.2

13

単離された化合物を C. violaceum CV026

株を用いて活性の確認をしたところ、0.01

～ 1 mg/mL の範囲で濃度依存的に C.

violaceum CV026 株の紫色の色素産生を抑

制した。 Maniwamycin C および F は

maniwamycin D および E よりも活性が強か

った（図 3）。また、quorum sensing を阻害す

る濃度範囲では、C. violaceum CV026 株をは

じめ種々の細菌及び真菌に対して抗菌活性

を示さなかった。

図 3 Maniwamycin 類の C. violaceum

CV026 紫色色素産生に対する阻害作用.

square; maniwamycin C, triangle; maniwamycin

D, circular; maniwamycin E, asterisk;

maniwamycin F.

4．おわりに

これまで、単なる抗菌活性に頼らない新

しい微生物の治療薬の探索を行ってきた。

薬剤耐性（antimicrobial resistance; AMR）の

ことは、人類初の抗生物質であるペニシリ

ンを発見したフレミング自身もノーベル賞

の受賞講演で指摘している。WHO は「今日

動かなければ、明日の治療はない」とし

AMR について取り組まなければならない

課題としてグローバルアクションプランを

策定した 15。抗菌薬の場合、菌の耐性化は逃

れられない宿命ではあるが、感染症治療薬

の概念を変えることによりこれからも新し

いコンセプトの治療方法が出現してくるの

ではないかと私は考えている。

現在、放線菌からの有用物質の探索は減

少し、放線菌からの開発された医薬品の割

合も減少傾向にある。他の有用な医薬品開

発方法にシフトするというのであれば問題

ないが、単に既知化合物しか発見できない

から探索を止めるというのでは、医療の発

展にはつながらない。それどころか、現在使

用中の抗菌薬が AMR により将来効果がな

くなる可能性も懸念され、将来の医薬品が

枯渇しないためにも感染症治療薬を開発し

続ける必要がある。AMR アクションプラン

でも指摘されているとおり、これからは、研

究者同士がライブラリーやスクリーニング

系をネットワーク化するなどして協調的に

探索研究を進める必要がある。

謝辞

本研究は、北里大学生命科学研究所・生物

機能研究室と東邦大学薬学部微生物学教室

で行われました。本研究を遂行するにあた

り数多くのご指導ご高配を賜りました北里

大学大村智特別栄誉教授、供田洋教授、塩見

和朗教授、金容必教授（現医療創成大学）、

東邦大学加藤文男名誉教授、安齊洋次郎教

授に深く感謝申し上げます。また、本研究に

対して日本放線菌学会浜田賞を賜りまたこ

と、学会長をはじめ学会員の皆々様に厚く

御礼申し上げます。

14

引用文献

1. Jevons, MP. (1961). "Celbenin"-resistant staphylo-

cocci. British Med J, 1, 124-125.

2. Ōmura S. (1999). Antiinfective drugs into the 21st

century. Nippon Saikingaku Zasshi, 54, 795-813.

3. Bassler, B.L. and Losick, R. (2006). Bacterially

speaking. Cell, 125, 237–246.

4. McLean, R.J., Whiteley, M, Stickler, D. J. and

Fuqua, W. C. (1997). Evidence of autoinducer

activity in naturally occurring biofilms. FEMS

Microbiol. Lett, 154, 259–263.

5. Falcão, J. P., Sharp, F. and Sperandio, V. (2004).

Cell-to-cell signaling in intestinal pathogens. Curr.

Issues Intest. Microbiol, 5, 9–17.

6. Finch, R.G., Pritchard, D.I., Bycroft, B.W.,

Williams, P. and Stewart, G.S. (1998). Quorum

sensing: a novel target for anti-infective therapy. J.

Antimicrob. Chemother, 42, 569–571.

7. Ubukata, K., Yamashita, N. and Konno, M. (1985).

Occurrence of a beta-lactam inducible penicillin-

binding protein in methicillin-resistant Staphylo-

cocci. Antimicrob Agents Chemother, 27, 851-857.

8. Fukumoto, A., Kim Y.P., Matsumoto, A., Takahashi,

Y., Shiomi. K., Tomoda, H., and Ōmura, S.

(2008). Cyslabdan, a new potentiator of imipenem

activity against methicillin-resistant

Staphylococcus aureus, produced by Streptomyces

sp. K04-0144. I. Taxonomy, fermentation,

isolation and structural elucidation. J. Antibiot,

61(1), 1-6.

9. 日本化学療法学会抗菌薬感受性測定検討委員会

報告. (1990). 微量液体希釈によるMIC測定法

(微量液体希釈法)-日本化学療法学会標準法-,

日本化学療法学会雑誌, 38(1), 102-105.

10. Fukumoto, A., Kim, Y.P., Hanaki, H., Shiomi, K.,

Tomoda H, and Ōmura S. (2008). Cyslabdan, a

new potentiator of imipenem activity against

methicillin-resistant Staphylococcus aureus,

produced by Streptomyces sp. K04-0144. II.

Biological activities. J. Antibiot, 61(1), 7-10.

11. McClean, K.H. et al. (1997). Quorum sensing and

Chromobacterium violaceum: exploitation of

violacein production and inhibition for the

detection of N-acylhomoserine lactones.

Microbiology, 143, 3703–3711.

12. Fukumoto, A., Murakami, C., Anzai, Y., and Kato,

F. (2016). Maniwamycins: new quorum-sensing

inhibitors against Chromobacterium violaceum

CV026 were isolated from Streptomyces sp.

TOHO-M025. J Antibiot, 69(5), 395-399.

13. Takahashi, Y. et al. (1989). Novel antifungal

antibiotics maniwamycins A and B. II. Structure

determination. J. Antibiot. 42, 1541–1546.

14. Ishiwatari, H. et al. (1995). Production of azoxy

compound. Japanese Patent, H07-33730.

15. World Health Organization. (2015). Global action

plan on antimicrobial resistance. WHA68/2015/

REC/1, Annex 3.

15

2018年度浜田賞受賞

福本敦博士

（東邦大学薬学部）

「放線菌により産生される細菌感染を制御するための

化合物の探索」

Hamada award 2018

Dr. Atsushi Fukumoto

(Faculty of Pharmaceutical Sciences, Toho University)

“Screening for novel bacterial infection control compounds from actinomycetes”

16

2020 年度（第 35 回）日本放線菌学会大会中止のお知らせ

2020 年 9 月 10 日から 2 日間にわたり福井県県民ホールで開催予定だった 2020 年度（第

35 回）日本放線菌学会大会について、新型コロナウイルス感染症（COVID-19）対策を講じ

たうえで大会を開催できるかどうかを大会長である福井県立大学の濱野先生と検討してま

いりました。しかし、「密」を避けての開催となると、ポスター発表は避けざるをえず、ま

た複数の会場を使用し全員口頭発表で行う方法も模索しましたが、会場の確保ができませ

んでした。以上の理由から、今年度の大会の開催は中止することといたしました。

なお、総会と受賞講演に関しましては、予定していた 9 月 10 日にオンラインで開催いた

しますので、会員の皆様におかれましては、ご参加いただきますようお願い申し上げます

（詳細は、後日、ニュースレターでお知らせします）。また、次年度の大会に関しましては、

再度、濱野先生にお引き受けいただけるか検討中です。

日本放線菌学会会長大利徹

17

2020年度日本放線菌学会四賞授賞者の決定について

2020年4月17日

会長早川正幸

日本放線菌学会は、下記のように2020年度日本放線菌学会四賞授賞者を決定しましたの

で以下にご報告致します。

日本放線菌学会大村賞（学会賞）および日本放線菌学会功績功労賞候補者については、理

事、評議員、監事およびその経験者が推薦することができます。日本放線菌学会浜田賞（研

究奨励賞）および日本放線菌学会企業賞候補者については、自薦も含めてすべての正会員が

推薦できることになっておりますので、今後も、積極的なご推薦をお願い申し上げます。

【大村賞（学会賞）】

大西康夫氏（東京大学大学院農学生命科学研究科）

「放線菌の形態分化制御と二次代謝産物生合成に関する研究」

【功績功労賞】

該当者なし

【浜田賞（研究奨励賞）】

舟橋賢記氏（第一三共RDノバーレ株式会社）

｢放線菌が生産するヌクレオシド系抗生物質の生合成研究｣

【企業賞】

日本マイクロバイオファーマ株式会社

｢放線菌を利用した医薬・化学品の製造および創薬支援への貢献｣

以上

18

日本放線菌学会賛助会員

長瀬産業（株）研究開発センター

アステラスファーマテック（株）富山技術センター技術開発部

協和キリン（株）研究開発本部創薬基盤研究所

（公財）微生物化学研究会微生物化学研究所

第一三共 RD ノバーレ（株）合成化学研究部天然物グループ

Meiji Seika ファルマ（株）足柄研究所

日本マイクロバイオファーマ（株）研究開発部

合同酒精（株）酵素医薬品研究所

味の素（株）生産統括センター

トヨタ紡織（株）基礎研究所

富士シリシア化学（株）研究開発グループ

（株）ファンケル総合研究所

著作権について

本誌に掲載された論文、抄録、記事等の著作権は、日本放線菌学会に帰属します。これら

著作物の一部または全部をいかなる形式でもそのまま転載しようとするときは、学会事務

局から転載許可を得て下さい。

日本放線菌学会誌第 34 巻 1 号

ACTINOMYCETOLOGICA 令和 2 年 7 月 8 日発行

編集兼発行日本放線菌学会

〒141－0021 東京都品川区上大崎 3-14-23

公益財団法人微生物化学研究会微生物化学研究所内

日本放線菌学会事務局

電話: 03-6455-7169 Fax: 03-3441-7589

E-mail [email protected]

年間購読料 5,000 円（会員無料）

http://www.actino.jp/

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お申し込みは学会事務局 [email protected] まで

CTINOMYCETO

LOG

IC

2020 VO

L. 34 NO

. 1 A

CTIN

OM

YCETO

LOG

ICA

VOL. 27 NO. 1

1990年12月18日第４種郵便物認可 ISSN 0914-5818

Published byThe Society for Actinomycetes Japan

日本放線菌学会誌　第３４巻１号 ACTINOMYCETOLOGICA VOL.３４ NO.１, ２０２０

誌会学菌線放本日

A B C D

http://www0.nih.go.jp/saj/index-j.html

(会員用)

2014

Documents

I C CAregular scientific meetings, workshops and publications of The Journal of Antibiotics (the official journal, joint publication with Japan Antibiotics Research Association), Actinomycetologica