1
EVALUATION OF THE DIAGNOSTIC HYBRIDS D 3 DUET DFA INFLUENZA A/RESPIRATORY VIRUS AND D3 DUET DFA RSV/RESPIRATORY VIRUS SCREENING KITS FOR THE DETECTION OF RESPIRATORY VIRUSES FROM CLINICAL SPECIMENS A. Munson , D. Bennion, D. Pombo, K. Gibson and P. Magee. LDS Intermountain Laboratory, Salt Lake City, Utah Amended Abstract Introduction: The rapid detection of respiratory viruses (influenza A, B, parainfluenza 1, 2, 3, adenovirus and RSV) by direct immunofluorescence (DFA) has had a significant impact on patient management and, more recently, therapeutic options. The two predominant viruses identified during the winter respiratory season are influenza A and respiratory syncytial virus (RSV). The new D3 Duet DFA Influenza A/ Respiratory Virus Screening Kit and D3 Duet DFA RSV/Respiratory Virus Screening Kit (Diagnostic Hybrids , Athens, OH) allow, by the use of fluorophore Phycoerytherin, the specific identification of these two viruses, respectively, while screening for the other 6 respiratory viruses. Objective: The purpose of this study was to evaluate the performance of the D3 Duet DFA Influenza A/ Respiratory Virus Screening Kit and D3 Duet DFA RSV/Respiratory Virus Screening Kit with the D3 Ultra DFA screening reagent (DHI) and SimulFluor™ Respiratory Screen reagent (CHEMICON International, Temecula, CA). Materials and methods: 319 specimens (nasopharyngeal [NP] swabs, NP aspirates, NP washes and bronchial washes) were processed according to standard laboratory practices for the preparation of cell spots for DFA testing. Cell spots were stained with the four reagents according to manufacturer’s instructions. Results: 1-Flu A/RSV dual infection was detected by both D3 Duet Kits. † 1-RSV/Parainfluenza 3 dual infection was detected by the D3 Duet RSV/Respy Conclusions: The D3 Duet DFA Influenza A/ Respiratory Virus Screening Kit correlated completely with the D3 Ultra DFA screening reagent (DHI). The PE labeled antibody identified the target virus with 100% sensitivity/specificity. The remaining FITC labeled antibodies also had a 100% sensitivity/specificity. The D3 Duet DFA RSV/Respiratory Virus Screening Kit failed to detect 1 positive RSV culture. The PE labeled antibody identified the target virus with 99% sensitivity and 100% specificity. The remaining FITC labeled antibodies had a 100% sensitivity/specificity. The Chemicon SimuFluor™ Respiratory Screen reagent was somewhat less sensitive for both the detection of RSV (96%) and for detection of Flu A (79%). The ability to rapidly detect influenza A and RSV specifically within a respiratory screening pool will reduce turn around time to results, technical time by eliminating additional cell spots and typing, as well the expenses relating to additional virus identification procedures. . Study Objective Determine the performance characteristics of the Diagnostic Hybrids D3 Duet DFA Influenza A/Respiratory Virus Screening Kit and the D3 Duet DFA RSV/Respiratory Virus Screening Kit when directly staining fresh respiratory specimens as compared to that of Diagnostic Hybrids D3 Ultra DFA Screening Reagent and simultaneously to Chemicon Simulfluor™ Respiratory Screening Reagent. Methods Three hundred-nineteen prospective respiratory specimens were collected at a large, western United States reference laboratory using approved collection methods for nasopharyngeal aspirations, nasopharyngeal washings, nasopharyngeal swabs, bronchioalveolar lavage, tracheal aspirations and sputa, respectively. Patient sex, age and specimen source were recorded for each specimen (see table #2). Each specimen was processed and fixed to slides using the manufacturer’s product insert instructions for each of the kits used. Control slides were also included with each day’s stain batch to insure functionality of the respective stains. Staining was performed according to manufacturer’s instruction and examined using a UV microscope with a broad-band filter system that captures fluorescence from both FITC and phycoerythrin labels. Results of the respective Duet stains, Ultra screening reagent and Chemicon Simulfluor™ dual stain were recorded. Discrepant analysis was accomplished by culture and virus identification using either D3 Ultra or Chemicon respiratory virus identification systems. Summary of Results One-hundred forty-one of the 319 specimens were determined to be positive by Diagnostic Hybrids D3 Ultra DFA Respiratory Virus Screening Reagent. The distribution of positive samples by virus isolated is listed below in Table #1. The D3 Duet DFA Influenza A/Respiratory Virus Screening Kit was able to detect all viruses detected by D3 Ultra for a 100% specificity and sensitivity,. The D3 Duet DFA RSV/Respiratory Virus Screening Kit failed to detect one RSV isolate detected by D3 Ultra resulting in a specificity of 100% and a sensitivity of 99.7%, respectively. The Light Diagnostics™ Simulfluor® Kit failed to detect Influenza A in three specimens and RSV in four specimens resulting in a sensitivity for the detection of influenza A and RSV of 79% and 96%, respectively. All results are listed below in Table #1. Distribution of confirmed virus detections by age group is also provided in Table #2. Two dual infections were detected by the D3 Duet DFA RSV/Respiratory Virus Screening Kit (Flu A & RSV; RSV & Parainfluenza 3) and one dual infection was detected by the D3 Duet DFA Influenza A/Respiratory Virus Screening Kit (Flu A & RSV). Conclusion – The ability to rapidly detect influenza A and RSV specifically within a respiratory screening pool will reduce turn around time to results, technical time by eliminating additional cell spots and typing, as well as the expenses related to additional virus identification procedures. DFA Screening Reagent Final Identification Neg Pos RSV Flu A Flu A Flu B RSV Adeno Para 1 Para 2 Para 3 178 141 NA 14 5 108 11 1 1 1 D3 Duet FluA/ Respy * 178 129 NA 14 14 5 108 11 1 1 1 D3Duet RSV/Respy *,† 179 35 107 NA 14 5 107 11 1 1 1 Chemicon Simulfluor 187 30 104 NA 11 5 104 11 1 1 1 305 0 D 3 Duet Flu A / Respy Negative 0 14 D 3 Duet Flu A / Respy Positive D 3 Ultra FluA Negative D 3 Ultra Flu A Positive 211 1 D 3 Duet RSV / Respy Negative 0 107 D 3 Duet RSV / Respy Positive D 3 Ultra RSV Negative D 3 Ultra RSV Positive 305 3 Simulfluor FluA Negative 0 11 Simulfluor FluA Positive D 3 Ultra FluA Negative D 3 Ultra FluA Positive 211 4 Simulfluor RSV Negative 0 104 Simulfluor RSV Positive D 3 Ultra RSV Negative D 3 Ultra RSV Positive Influenza A w/ Influenza A/Respiratory Duet Influenza A w/Influenza A/Respiratory Duet Influenza A w/RSV/Respiratory Duet Influenza A w/RSV Respiratory Duet RSV w/RSV/Respiratory Duet Dual infection w/RSV/Respiratory Duet RSV w/Influenza A/Respiratory Duet Dual Infection w/Flu A/Respiratory Duet Comparison of Light Diagnostics™ Simulfluor® to D 3 Ultra Respiratory Comparison of Diagnostic Hybrids D 3 Respiratory Duet DFA Kits to D 3 Ultra

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EVA

LUA

TIO

N O

F TH

E D

IAG

NO

STIC

HYB

RID

S D

3D

UET

DFA

INFL

UEN

ZA A

/RES

PIR

ATO

RY

VIR

US

AN

D D

3 D

UET

D

FA R

SV/R

ESPI

RA

TOR

Y VI

RU

S SC

REE

NIN

G K

ITS

FOR

TH

E D

ETEC

TIO

N O

F R

ESPI

RA

TOR

Y VI

RU

SES

FRO

M

CLI

NIC

AL

SPEC

IMEN

SA

. Mun

son,

D. B

enni

on, D

. Pom

bo, K

. Gib

son

and

P. M

agee

. LD

S In

term

ount

ain

Labo

rato

ry, S

alt L

ake

City

, Uta

h

Am

ende

d Ab

stra

ctIn

trod

uctio

n: T

he ra

pid

dete

ctio

n of

resp

irato

ry v

iruse

s (in

fluen

za A

, B,

para

influ

enza

1, 2

, 3, a

deno

viru

s an

d R

SV) b

y di

rect

imm

unof

luor

esce

nce

(DFA

) ha

s ha

d a

sign

ifica

nt im

pact

on

patie

nt m

anag

emen

t and

, mor

e re

cent

ly,

ther

apeu

tic o

ptio

ns. T

he tw

o pr

edom

inan

t viru

ses

iden

tifie

d du

ring

the

win

ter

resp

irato

ry s

easo

n ar

e in

fluen

za A

and

resp

irato

ry s

yncy

tial v

irus

(RSV

). T

he

new

D3

Due

t DFA

Influ

enza

A/ R

espi

rato

ry V

irus

Scre

enin

g K

it an

dD

3 D

uet D

FA

RSV

/Res

pira

tory

Viru

s Sc

reen

ing

Kit

(Dia

gnos

tic H

ybrid

s ,

Athe

ns, O

H) a

llow

, by

the

use

of fl

uoro

phor

e Ph

ycoe

ryth

erin

, the

spe

cific

iden

tific

atio

n of

thes

e tw

o vi

ruse

s, re

spec

tivel

y, w

hile

scr

eeni

ng fo

r the

oth

er 6

resp

irato

ry v

iruse

s.

Obj

ectiv

e: T

he p

urpo

se o

f thi

s st

udy

was

to e

valu

ate

the

perf

orm

ance

of t

he D

3 D

uet D

FA In

fluen

za A

/ Res

pira

tory

Viru

s Sc

reen

ing

Kit

and

D3

Due

t DFA

R

SV/R

espi

rato

ry V

irus

Scre

enin

g K

it w

ith th

e D

3 U

ltra

DFA

scr

eeni

ng re

agen

t (D

HI)

and

Sim

ulFl

uor™

Res

pira

tory

Scr

een

reag

ent (

CH

EMIC

ON

Inte

rnat

iona

l, Te

mec

ula,

CA)

. M

ater

ials

and

met

hods

: 319

spe

cim

ens

(nas

opha

ryng

eal [

NP]

sw

abs,

NP

aspi

rate

s, N

P w

ashe

s an

d br

onch

ial w

ashe

s) w

ere

proc

esse

d ac

cord

ing

to

stan

dard

labo

rato

ry p

ract

ices

for t

he p

repa

ratio

n of

cel

l spo

ts fo

r DFA

test

ing.

C

ell s

pots

wer

e st

aine

d w

ith th

e fo

ur re

agen

ts a

ccor

ding

to m

anuf

actu

rer’s

in

stru

ctio

ns.

Res

ults

:

1-Fl

u A/

RSV

dua

l inf

ectio

n w

as d

etec

ted

by b

oth

D3

Due

t Kits

. †

1-R

SV/P

arai

nflu

enza

3 d

ual i

nfec

tion

was

det

ecte

d by

the

D3

Due

t RSV

/Res

py

Con

clus

ions

: Th

e D

3 D

uet D

FA In

fluen

za A

/ Res

pira

tory

Viru

s Sc

reen

ing

Kit

corr

elat

ed c

ompl

etel

y w

ith th

e D

3 U

ltra

DFA

scr

eeni

ng re

agen

t (D

HI).

The

PE

labe

led

antib

ody

iden

tifie

d th

e ta

rget

viru

s w

ith 1

00%

sen

sitiv

ity/s

peci

ficity

. The

re

mai

ning

FIT

C la

bele

d an

tibod

ies

also

had

a 1

00%

sen

sitiv

ity/s

peci

ficity

. The

D3

Due

t DFA

RSV

/Res

pira

tory

Viru

s Sc

reen

ing

Kit

faile

d to

det

ect 1

pos

itive

RSV

cu

lture

. The

PE

labe

led

antib

ody

iden

tifie

d th

e ta

rget

viru

s w

ith 9

9% s

ensi

tivity

an

d 10

0% s

peci

ficity

. The

rem

aini

ng F

ITC

labe

led

antib

odie

s ha

d a

100%

se

nsiti

vity

/spe

cific

ity. T

he C

hem

icon

Sim

uFlu

or™

Res

pira

tory

Scr

een

reag

ent

was

som

ewha

t les

s se

nsiti

ve fo

r bot

h th

e de

tect

ion

of R

SV (9

6%) a

nd fo

r de

tect

ion

of F

lu A

(79%

). Th

e ab

ility

to ra

pidl

y de

tect

influ

enza

A a

nd R

SV

spec

ifica

lly w

ithin

a re

spira

tory

scr

eeni

ng p

ool w

ill re

duce

turn

aro

und

time

to

resu

lts, t

echn

ical

tim

e by

elim

inat

ing

addi

tiona

l cel

l spo

ts a

ndty

ping

, as

wel

l the

ex

pens

es re

latin

g to

add

ition

al v

irus

iden

tific

atio

n pr

oced

ures

.. St

udy

Obj

ectiv

eD

eter

min

e th

e pe

rform

ance

cha

ract

eris

tics

of th

e D

iagn

ostic

Hyb

rids

D3

Due

t DFA

Influ

enza

A/R

espi

rato

ry V

irus

Scr

eeni

ng K

it an

d th

e D

3 D

uet D

FA R

SV

/Res

pira

tory

Viru

s S

cree

ning

Kit

whe

n di

rect

ly s

tain

ing

fresh

resp

irato

ry s

peci

men

s as

com

pare

d to

that

of D

iagn

ostic

Hyb

rids

D3

Ultr

a D

FA S

cree

ning

Rea

gent

and

sim

ulta

neou

sly

to C

hem

icon

S

imul

fluor

™R

espi

rato

ry S

cree

ning

Rea

gent

.

Met

hods

Thre

e hu

ndre

d-ni

nete

en p

rosp

ectiv

e re

spira

tory

spe

cim

ens

wer

e co

llect

ed a

t a la

rge,

wes

tern

Uni

ted

Sta

tes

refe

renc

e la

bora

tory

usin

g ap

prov

ed c

olle

ctio

n m

etho

ds fo

r nas

opha

ryng

eal a

spira

tions

, na

soph

aryn

geal

was

hing

s, n

asop

hary

ngea

l sw

abs,

bro

nchi

oalv

eola

r la

vage

, tra

chea

l asp

iratio

ns a

nd s

puta

, res

pect

ivel

y. P

atie

nt s

ex, a

ge a

nd

spec

imen

sou

rce

wer

e re

cord

ed fo

r eac

h sp

ecim

en (s

ee ta

ble

#2).

Eac

h sp

ecim

en w

as p

roce

ssed

and

fixe

d to

slid

es u

sing

the

man

ufac

ture

r’s

prod

uct i

nser

t ins

truct

ions

for e

ach

of th

e ki

ts u

sed.

Con

trol s

lides

wer

e al

so in

clud

ed w

ith e

ach

day’

s st

ain

batc

h to

insu

re fu

nctio

nalit

y of

the

resp

ectiv

e st

ains

. Sta

inin

g w

as p

erfo

rmed

acc

ordi

ng to

man

ufac

ture

r’s

inst

ruct

ion

and

exam

ined

usi

ng a

UV

mic

rosc

ope

with

a b

road

-ban

d fil

ter

syst

em th

at c

aptu

res

fluor

esce

nce

from

bot

h FI

TC a

nd p

hyco

eryt

hrin

la

bels

. Res

ults

of t

he re

spec

tive

Due

t sta

ins,

Ultr

a sc

reen

ing

reag

ent a

nd

Che

mic

on S

imul

fluor

™du

al s

tain

wer

e re

cord

ed. D

iscr

epan

t ana

lysi

s w

as a

ccom

plis

hed

by c

ultu

re a

nd v

irus

iden

tific

atio

n us

ing

eith

er D

3 U

ltra

or C

hem

icon

resp

irato

ry v

irus

iden

tific

atio

n sy

stem

s.

Sum

mar

y of

Res

ults

One

-hun

dred

forty

-one

of t

he 3

19 s

peci

men

s w

ere

dete

rmin

ed to

be

posi

tive

by D

iagn

ostic

Hyb

rids

D3

Ultr

a D

FA R

espi

rato

ry V

irus

Scre

enin

g R

eage

nt. T

he d

istri

butio

n of

pos

itive

sam

ples

by

viru

s is

olat

ed is

lis

ted

belo

w in

Tab

le #

1. T

he D

3 D

uet D

FA In

fluen

za A

/Res

pira

tory

Viru

s S

cree

ning

Kit

was

abl

e to

det

ect

all v

iruse

s de

tect

ed b

y D

3 U

ltra

for a

100

% s

peci

ficity

and

sen

sitiv

ity,.

The

D3

Due

t DFA

RSV

/Res

pira

tory

Vi

rus

Scre

enin

g Ki

t fai

led

to d

etec

t one

RSV

isol

ate

dete

cted

by

D3

Ultr

a re

sulti

ng in

a s

peci

ficity

of 1

00%

an

d a

sens

itivi

ty o

f 99.

7%, r

espe

ctiv

ely.

The

Lig

ht D

iagn

ostic

s™Si

mul

fluor

®Ki

t fai

led

to d

etec

t Inf

luen

za

A in

thre

e sp

ecim

ens

and

RSV

in fo

ur s

peci

men

s re

sulti

ng in

a s

ensi

tivity

for t

he d

etec

tion

of in

fluen

za A

an

d R

SV o

f 79%

and

96%

, res

pect

ivel

y. A

ll re

sults

are

list

ed b

elow

in T

able

#1.

Dis

tribu

tion

of c

onfir

med

vi

rus

dete

ctio

ns b

y ag

e gr

oup

is a

lso

prov

ided

in T

able

#2.

Tw

o du

al in

fect

ions

wer

e de

tect

ed b

y th

e D

3 D

uet D

FA R

SV/R

espi

rato

ry V

irus

Scre

enin

g Ki

t (Fl

u A

& R

SV;

RSV

&Pa

rain

fluen

za 3

) and

one

dua

l in

fect

ion

was

det

ecte

d by

the

D3

Due

t DFA

Influ

enza

A/R

espi

rato

ry V

irus

Scre

enin

g Ki

t (Fl

u A

& R

SV).

Con

clus

ion

–Th

e ab

ility

to ra

pidl

y de

tect

influ

enza

A a

nd R

SV s

peci

fical

ly w

ithin

a re

spira

tory

scr

eeni

ng p

ool w

ill

redu

ce tu

rn a

roun

d tim

e to

resu

lts, t

echn

ical

tim

e by

elim

inat

ing

addi

tiona

l cel

l spo

ts a

nd ty

ping

, as

wel

l as

the

expe

nses

rela

ted

to a

dditi

onal

viru

s id

entif

icat

ion

proc

edur

es.

DFA

Scr

eeni

ng R

eage

ntFi

nal I

dent

ifica

tion

Neg

Pos

RSV

Flu

AFl

u A

Flu

BR

SVA

deno

Para

1Pa

ra 2

Para

3

D3

Ultr

a17

814

1N

A14

510

811

11

1

D3

Due

t Fl

uA/

Res

py*

178

129

NA

1414

510

811

11

1

D3D

uet

RSV

/Res

py*,

†17

935

107

NA

145

107

111

11

Che

mic

on

Sim

ulflu

or18

730

104

NA

115

104

111

11

305

0D

3D

uet F

lu A

/ R

espy

Neg

ativ

e

014

D3

Due

t Flu

A /

R

espy

Posi

tive

D3 U

ltra

FluA

Neg

ativ

eD

3 Ultr

a Fl

u A

Pos

itive

211

1D

3 Due

t RSV

/ R

espy

Neg

ativ

e

010

7D

3 Due

t RSV

/ R

espy

Posi

tive

D3 U

ltra

RSV

Neg

ativ

eD

3 Ultr

a R

SV P

ositi

ve

305

3Si

mul

fluor

Fl

uAN

egat

ive

011

Sim

ulflu

or

FluA

Posi

tive

D3 U

ltra

FluA

Neg

ativ

eD

3 Ultr

aFl

uAPo

sitiv

e

211

4Si

mul

fluor

R

SV N

egat

ive

010

4

Sim

ulflu

or

RSV

Pos

itive

D3 U

ltra

RSV

Neg

ativ

eD

3 Ultr

a R

SV P

ositi

ve

Influ

enza

A w

/ Inf

luen

za A

/Res

pira

tory

Due

tIn

fluen

za A

w/In

fluen

za A

/Res

pira

tory

Due

t

Influ

enza

A w

/RSV

/Res

pira

tory

Due

tIn

fluen

za A

w/R

SV R

espi

rato

ry D

uet

RSV

w/R

SV/R

espi

rato

ry D

uet

Dua

l inf

ectio

n w

/RS

V/R

espi

rato

ry D

uet

RSV

w/In

fluen

za A

/Res

pira

tory

Due

tD

ual I

nfec

tion

w/F

lu A

/Res

pira

tory

Due

t

Com

paris

on o

f Lig

ht D

iagn

ostic

s™Si

mul

fluor

®to

D3

Ultr

a R

espi

rato

ry

Com

paris

on o

f Dia

gnos

tic H

ybrid

s D

3R

espi

rato

ry D

uet D

FA K

its to

D3

Ultr

a