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Geological Applications of Helium Ion Microscopy Analysis and Visualization of the Pore Networks within Shale and Coal Introduction Geological materials may be charac- terized using a variety of microscopy- based techniques (e.g., optical micros- copy, scanning electron microscopy (SEM), atomic force microscopy (AFM), transmission and scanning transmission electron microscopy (TEM/STEM), etc.). These tools traditionally provide criti- cal structure/property relationship in- formation. Currently, shale gas and coal bed methane are gaining increased in- terest as energy sources. Mercury injec- tion capillary pressure (MICP) [1, 2], gas sorption [3], small angle x-ray scatter- ing (SAXS) [4], and small angle neutron scattering (SANS) [4] data suggest that micro- to nano-scale pores exist within shale [1, 2] and coal [3, 4]. Thus, direct visualization of the pore networks lead- ing to gas transport within shale forma- tions and coal deposits remains rele- vant to fully evaluating gas storage and recovery issues associated with these resources. Transmitted and reflected light mi- croscopy studies allow large areas of each material to be examined but are resolution limited with respect to nano- scale features. Secondary and backscat- tered electron (SE and BE) imaging stud- ies conducted in the SEM provide wide area views of inhomogeneous surfaces but fail when handling non-conductive materials. SEM studies on insulating ma- terials require either the addition of a conductive coating which obliterates fine surface details or lowering the acceler- ating voltage which decreases resolu- tion. Thus, SEM-based analyses provide minimal information in the critical nano-scale regime. AFM is highly surface sensitive and can readily image non-conductive mate- rials. AFM, however, requires that a fine tip be rastered across a surface to pro- duce an image. Thus, the surface must be relatively flat in order to effectively resolve nano-scale features. Obtaining such a surface from a geological mate- rial generally requires microtomy as var- ious ion polishing and milling techniques yield non-ideal surfaces for imaging small features (e.g., curtaining effects, severe sloping, etc.). Microtomy, unfor- tunately, is a tedious and time-consum- ing sample preparation process which ultimately yields a surface that is typi- cally only a few square millimeters in size. The small analysis area and lengthy sample preparation requirements make AFM less than desirable for characteri- zation of highly inhomogeneous geologi- cal materials. TEM/STEM studies are capable of imaging nano-scale features. However, sample preparation is notoriously slow, requiring that a specimen be milled from the bulk material. In addition, TEM/STEM samples are very small and thus are not suited to characterizing large (centime- ter-scale) surface areas. Consequently, it becomes important to utilize an analysis technique that has the ability to image large areas of non-conductive materials at high resolution. The only instrument meeting all these requirements is the Helium Ion Microscope (HIM) [5–9]. Methods and Materials The HIM is well documented in the litera- ture [5–9]. Similar to the SEM, the HIM is designed to easily accommodate samples that are several centimeters in diameter. Due to a variety of factors (e.g., probe characteristics, probe-specimen interac- tions, etc.), however, the HIM produces SE images that are significantly more surface sensitive than those generated by the SEM [1-5]. However, unlike the SEM, the HIM mitigates charging without resorting to coating the specimen or low- ering the accelerating voltage, steps that decrease resolution. The HIM’s electron flood gun provides charge neutralization, enabling the direct examination of non- conductive geological specimens while maintaining high resolution. Several samples are presented here to illustrate potential application of HIM to geological specimens. Upper Devo- nian shales of the Muskwa (2247.11 m) and Middle Otter Park (2256.4 m) forma- tions represent strata with demonstrated gas productivity from the Horn River Ba- sin [10]. The mineralogy of the Muskwa shale is 67% quartz and 19% clay, while the Middle Otter Park shale contains 47% quartz and 33% clay. K-feldspar, plagioclase, pyrite, calcite, ankerite and dolomite are secondary minerals. The Muskwa shale contains 6.45 wt.% total organic carbon (TOC) and has a total po- rosity of 5.75%. The Middle Otter Park shale contains 6.16 wt.% total organic carbon (TOC) and has a total porosity of 5.15%. Both samples are well into the gas generative window with vitrinite re- flectance values of ~2.0 %R o . Pocahon- tas #3, one of the Argonne Premium coal reference samples, is a low-volatile bitu- minous coal from Buchanan County, Vir- ginia [11]. This coal is 86.7 wt.% carbon with a low H/C ratio of 0.586, which is consistent with its measured mean vit- rinite reflectance of 1.68%R o . The sand- stone is from Teal Field, North Sea and represents a formation where porosity has been preserved by the precipitation of microquartz. All sample surfaces investigated here are freshly cleaved just prior to loading into the HIM. No additional sample prep- aration is required. Secondary electron images (SEI’s) are collected at an accel- erating voltage of 35 keV with a beam current of 0.3 pA. The use of an electron flood gun to mitigate charging effects is noted in the figure captions. Results Organic Porosity in Shales The Upper Devonian shales from Horn River Basin are representative of the type of low permeability strata that pro- duces gas upon fracturing. HIM readily images the mineral fabric and, more im- portantly, the organic porosity and mi- gration pathways that are key factors in determining gas productivity (fig. 1–3). The samples were sufficiently conductive that charge neutralization was not nec-

Geological Applications

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  • Geological Applications of Helium Ion MicroscopyAnalysis and Visualization of the Pore Networks within Shale and Coal

    Introduction

    Geological materials may be charac-terized using a variety of microscopy-based techniques (e.g., optical micros-copy, scanning electron microscopy (SEM), atomic force microscopy (AFM), transmission and scanning transmission electron microscopy (TEM/STEM), etc.). These tools traditionally provide criti-cal structure/property relationship in-formation. Currently, shale gas and coal bed methane are gaining increased in-terest as energy sources. Mercury injec-tion capillary pressure (MICP) [1, 2], gas sorption [3], small angle x-ray scatter-ing (SAXS) [4], and small angle neutron scattering (SANS) [4] data suggest that micro- to nano-scale pores exist within shale [1, 2] and coal [3, 4]. Thus, direct visualization of the pore networks lead-ing to gas transport within shale forma-tions and coal deposits remains rele-vant to fully evaluating gas storage and recovery issues associated with these resources.

    Transmitted and reflected light mi-croscopy studies allow large areas of each material to be examined but are resolution limited with respect to nano-scale features. Secondary and backscat-tered electron (SE and BE) imaging stud-ies conducted in the SEM provide wide area views of inhomogeneous surfaces but fail when handling non-conductive materials. SEM studies on insulating ma-terials require either the addition of a conductive coating which obliterates fine surface details or lowering the acceler-ating voltage which decreases resolu-tion. Thus, SEM-based analyses provide minimal information in the critical nano-scale regime.

    AFM is highly surface sensitive and can readily image non-conductive mate-rials. AFM, however, requires that a fine tip be rastered across a surface to pro-duce an image. Thus, the surface must be relatively flat in order to effectively resolve nano-scale features. Obtaining such a surface from a geological mate-rial generally requires microtomy as var-

    ious ion polishing and milling techniques yield non-ideal surfaces for imaging small features (e.g., curtaining effects, severe sloping, etc.). Microtomy, unfor-tunately, is a tedious and time-consum-ing sample preparation process which ultimately yields a surface that is typi-cally only a few square millimeters in size. The small analysis area and lengthy sample preparation requirements make AFM less than desirable for characteri-zation of highly inhomogeneous geologi-cal materials.

    TEM/STEM studies are capable of imaging nano-scale features. However, sample preparation is notoriously slow, requiring that a specimen be milled from the bulk material. In addition, TEM/STEM samples are very small and thus are not suited to characterizing large (centime-ter-scale) surface areas. Consequently, it becomes important to utilize an analysis technique that has the ability to image large areas of non-conductive materials at high resolution. The only instrument meeting all these requirements is the Helium Ion Microscope (HIM) [59].

    Methods and Materials

    The HIM is well documented in the litera-ture [59]. Similar to the SEM, the HIM is designed to easily accommodate samples that are several centimeters in diameter. Due to a variety of factors (e.g., probe characteristics, probe-specimen interac-tions, etc.), however, the HIM produces SE images that are significantly more surface sensitive than those generated by the SEM [1-5]. However, unlike the SEM, the HIM mitigates charging without resorting to coating the specimen or low-ering the accelerating voltage, steps that decrease resolution. The HIMs electron flood gun provides charge neutralization, enabling the direct examination of non-conductive geological specimens while maintaining high resolution.

    Several samples are presented here to illustrate potential application of HIM to geological specimens. Upper Devo-nian shales of the Muskwa (2247.11 m)

    and Middle Otter Park (2256.4 m) forma-tions represent strata with demonstrated gas productivity from the Horn River Ba-sin [10]. The mineralogy of the Muskwa shale is 67% quartz and 19% clay, while the Middle Otter Park shale contains 47% quartz and 33% clay. K-feldspar, plagioclase, pyrite, calcite, ankerite and dolomite are secondary minerals. The Muskwa shale contains 6.45 wt.% total organic carbon (TOC) and has a total po-rosity of 5.75%. The Middle Otter Park shale contains 6.16 wt.% total organic carbon (TOC) and has a total porosity of 5.15%. Both samples are well into the gas generative window with vitrinite re-flectance values of ~2.0 %Ro. Pocahon-tas #3, one of the Argonne Premium coal reference samples, is a low-volatile bitu-minous coal from Buchanan County, Vir-ginia [11]. This coal is 86.7 wt.% carbon with a low H/C ratio of 0.586, which is consistent with its measured mean vit-rinite reflectance of 1.68%Ro. The sand-stone is from Teal Field, North Sea and represents a formation where porosity has been preserved by the precipitation of microquartz.

    All sample surfaces investigated here are freshly cleaved just prior to loading into the HIM. No additional sample prep-aration is required. Secondary electron images (SEIs) are collected at an accel-erating voltage of 35 keV with a beam current of 0.3 pA. The use of an electron flood gun to mitigate charging effects is noted in the figure captions.

    Results

    Organic Porosity in Shales

    The Upper Devonian shales from Horn River Basin are representative of the type of low permeability strata that pro-duces gas upon fracturing. HIM readily images the mineral fabric and, more im-portantly, the organic porosity and mi-gration pathways that are key factors in determining gas productivity (fig. 13). The samples were sufficiently conductive that charge neutralization was not nec-

  • essary. Conductive surfaces are bright while insulating areas are dark. This is in contrast to SEM where insulating areas may be bright due to charging.

    Features that were previously seen in ion-milled SEM and STEM studies of

    other gas producing shales [1, 2, 12-15] are easily identified in the HIM images. Most of the pores are found in intraparti-cle organic matter that has a spongy ap-pearance (fig. 1). This material, almost certainly solid bitumen formed from the thermal alteration of residual petroleum, contains pores of varying size. However, the smallest imaged pores are ~2 nm in diameter, which is approximately dou-ble the best resolution seen in published SEM images [14, 15]. HIM also provides a greater depth of field than SEM and a three dimensional view of the pore net-work can be imaged without the need of ion milling in dual beam SEM systems. HIM has similar sample size capacity and field of view as SEM and imaging both large and small pores over a large sur-face area is easily done.

    Large pores (fig. 2) are considered essential for significant gas storage15, however, connectivity of these pores appears to be restricted to relatively smaller pore throats (down to 2 nm in di-ameter). These observations are consist-ent with MICP measurements [1, 2].

    While total pore volume associated with the organic matter determines the amount of gas in place, the pore connec-tivity and pore throat geometry deter-mines the permeability of the shale and is a critical element for successful exploita-tion. Prior studies have partially imaged the pore network using dual-beam in-struments that combine focused ion (FIB) beam milling and SEM. A small volume of rock, typically ~125 m3, is imaged by backscattered electrons after ion milling the surface. Sequential images, as many as 500, are then used to reconstruct the network of organic matter or pores [15]. The technique has provided great insight into the factors that control permeability but is time consuming, is limited to pores >5 nm in diameter, and may have arti-facts imposed by the ion milling.

    HIM offers the prospect of rapidly screening for relatively larger scale mi-gration pathways. For example, a con-tinuous pore network is imaged in a Muskwa shale that spans ~2 m in length (fig. 3a). HIM demonstrates that this fea-ture is a continuous network of pores that form a pathway ~20-50 nm in width (fig. 3c, d), embedded within the spongy organic matter with the characteristic ~2 to 20 nm diameter pores that connects with larger pores (fig. 3d, e).

    Based on these geometries, we inter-pret this feature to be a relic from when the source rock generated and expelled oil. During the process of thermal matu-ration, not all generated petroleum was expelled. The residual bitumen filling the expulsion pathway was converted into solid organic matter that generated gas upon further thermal alteration. Note that these geometries are not consist-ent with mechanically induced fracturing during sample preparation.

    In places, the pathway and the spongy organic matter is partially obscured by a thin layer of clay (fig. 3c, d), This clay layer may impede gas migration. How-ever, small microcracks observed along the organic-mineral interface may result in macroscale connectivity that allows for the rocks to produce gas at economic rates.

    Coal Porosity

    Pores in coals are characterized as macro (50 nm to ~50 m), meso (5 to 50 nm) and micro (< 5 nm) [16]. The methods used to characterize the micropore size distribu-tion are mostly indirect, such as mercury porosimetry, nitrogen or carbon dioxide adsorption isotherms or SANS and SAXS [3, 4], as SEM and AFM have difficulty re-solving micropores < 5 nm in coals [17].

    Fig. 1: HIM of Middle Otter Park Shale from Horn River Basin. Gas is stored primarily in the spongy organic matter. Pores as small as 2nm are imaged. Electron flood gun off.

    Fig. 2: HIM of Muskwa Shale from Horn River Basin. Large pores associated with spongy or-ganic matter account for most of the pore volume available for gas storage. Electron flood gun off.

    Fig. 3: Muskwa Shale from Horn River Basin. a. A pathway for gas expulsion and transport (white arrows) can be traced spanning the width of the image. b. e. The migration feature filled with the spongy organic matter that forms an apparently connected network of pores. Electron flood gun off.

    c

    e

  • TEM can resolve coal micropores with difficulty [18, 19].

    Micropore capacity and surface area decrease and then increase with rank, passing through a minimum in the high to low volatile bituminous coal ranks [20]. HIM analysis of the low volatile bi-tuminous Pocahontas #3 coal found no evidence of micropores on most sur-faces suggesting that these structures are mostly < 1nm in diameter. However, a few domains of meso- and micropores were observed (fig. 4). The larger pores are unexpected considering the rank of the Pocahontas #3 coal.

    Microquartz

    Porosity typically decreases with depth in sedimentary rocks due to compaction and cementation. Some sandstone res-ervoirs deviate from these trends as fine coatings of clays or microquartz prevent the growth of ordinary quartz cements [21-23]. Recently, a combination of ad-vanced imaging techniques (high-reso-lution secondary electron, backscattered electron, and transmission electron mi-croscopy) revealed that quartz cemen-tation is inhibited when a nanofilm of amorphous silica and a layer of chalced-ony forms between the surface of detrital quartz grains and the microquartz coat-ing [24]. The amorphous silica prevents syntaxial growth of the quartz grain, while the microquartz adapts the orien-tation of the underlying chalcedony with its c-axis parallel to the grain surface. HIM imaging of a North Sea sandstone shows microquartz covering the surfaces of detrital quartz grains (fig. 5a). This im-aging was conducted without the need for any sample preparation. The electron flood gun was used to prevent charge ac-cumulation. In some locations, the inhi-bition of quartz cementation by micro-

    quartz is not complete and some quartz overgrowths are found (fig. 5b). The pre-ferred growth orientation of the micro-quartz, with their c-axis parallel to the surface of the underlying quartz grain, is easily seen.

    Conclusions

    HIM has successfully characterized ma-ture shales, coals, and reservoir rocks. Analyses are conducted without the need of ion milling or application of conduc-tive coatings that may produce artifacts. The high resolution and depth of field of-fered by HIM provides detailed images of features that are difficult to see with other microscopy methods. Nanoporous bitumen-rich regions that may serve as places for gas storage and as pathways for gas transport are readily observed throughout the high maturity shales. Pores as small as 2 nm are observed in a low-volatile coal along with larger meso-pores. Microquartz overgrowths, which can preserve porosity in sandstones, are

    easily imaged. These findings illustrate that HIM provides a new tool in the na-noscale characterization of geologic samples that are important in developing both conventional and unconventional resources.

    Acknowledgements

    We would like to thank the management of ExxonMobil Research & Engineering, Imperial Oil Ltd, and ExxonMobil Up-stream Research for promoting this re-search and allowing for its publication and to the entire team at Zeiss for the de-velopment and commercialization of the Helium Ion Microscope.

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    Authors

    Chris E. Kliewer and Clifford C. WaltersExxonMobil Research and Engineering Co., Annandale, NJ 08801, USAChuong Huynh, Larry Scipioni and Danielle ElswickCarl Zeiss, Applications laboratory, Peabody, MA 01960, USARene Jonk, Nicholas AustinImperial Oil, Calgary, Alberta, Canada T2P 3M9Marsha W. FrenchExxonMobil Upstream Research Co., Houston, Texas 77027, USA

    ContactChris E. KliewerExxonMobil Research and Engineering Co.Annandale, NJ 08801, [email protected]