1
page.1 Expansion of a Stochastic Model for Anelosimus Studiosus Movement During Prey Capture Alex John Quijano 1 | Dr. Michele L. Joyner 1,3 | Dr. Thomas Jones 2 | Nathaniel Hancock 2 | Michael Largent 2 | Chelsea Ross 1 Department of Mathematics and Statistics 1 | Department of Biological Sciences 2 | Institute for Quantitative Biology 3 East Tennessee State University Johnson City, TN 37614 CRAWL Collaborative Research on the Arthropod Way of Life NSF grant #1128954 Introduction A. Studiosus is a sub- social spider phenotype. The juveniles of the spi- der species stays with there mother until ma- turity to help on web maintenance and prey capture. Juveniles dis- perse throughout the web to cooperate during prey capture. The spiders use vibrational cues to detect they prey. Goal To expand the stochastic model in order for us to simulate a realistic movement during prey cap- ture of A. Studiosus. Data Collection The spiders were placed in shallow plastic boxes and housed in a lab- oratory setting. Dur- ing feeding sessions, the movement during prey capture is recorded us- ing a high resolution camera. The movements were then digitized using a tracking software [1]. The data collected was analyzed to determine the factors in- volved for expanding the stochastic model. Modified Factors The error in the direction the spider travels towards the prey is taken from a normal distribution with mean e(d)=0.0040d 3 - 0.0688d 2 +0.3429d - 0.0738 (1) where d is the distance from the spider to the prey. The duration of pauses, velocity of runs, and duration of runs are all taken from an exponential distribution using the mean found from an optimization algorithm. The Stochastic Model Eq. (2) was derived by Joyner and Ross et. al. [3] from the work by Brillinger and Preisler et. al. [2]. dr(t)= μ{r(t),t} dt {r(t),t} dW(t) (2) r(t)=[ X s (t),Y s (t)] Location at time t. W(t) Brownian motion. dt Change in time. Σ{r(t),t}dt Diffusion component. Σ{r(t),t} = σ x 0 0 σ y , σ x = σ y = σ μ{r(t),t}→ Directional component. μ{r(t),t} = v s cos (θ o (t i )+ (t, d i )) sin (θ o (t i )+ (t, d i )) θ o (t i ) Optimal direction. (t, d i ) Error in direction using mean from Eq. (1). t u i Update times i = {1, 2, ··· ,n}. v s Velocity Expansion Pauses and runs are included into the model using the algorithm in Figure 1. Let D p be the duration of pause, D r be the duration of run, T p be the timer for pauses, and T r be the timer for runs. Starting Position at [X s (0),Y s (0)]. Initial values: v s = 0, D r = 0, D p = 0, e(d) > 0, T p = 0, T r = 0, i =1 Is [X s (t),Y s (t)] within the capture distance? Updates: v s > 0 θ o (t i ) > 0 Is v s = 0? T p = T p + dt Capture Is T p D p ? T r = T r + dt t = t + dt Is T r D r ? Updates: v s =0 D r > 0 D p > 0 e(d) > 0 T p =0 T r =0 i = i +1 dr(t)= μ{r(t),t} dt {r(t),t} dW(t) ··· . . . . . . Y N Y N N Y N Y Figure 1: The Stochastic Model Algorithm. Results Spider 1 2 3 4 5 6 7 8 9 10 Act. Time Elapsed (s) 4.8380 18.7180 2.2690 6.2070 4.5045 9.4000 8.5502 4.1291 24.2325 87.1704 Mean (1000) Sim. Time Elapsed (s) 4.8168 18.7428 2.2591 6.4080 4.5103 9.8384 8.5169 4.1002 24.3806 87.1152 Time Elapsed Rel. Error 0.0044 0.0013 0.0044 0.0324 0.0013 0.0466 0.0039 0.0070 0.0061 0.0006 Act. Dist. Traveled (cm) 7.6733 19.9008 5.7477 14.7958 6.6750 6.7534 4.8273 9.9694 16.2675 12.0595 Mean (1000) Sim. Dist. Traveled (cm) 7.6500 20.0214 5.7235 15.2653 6.7318 7.1328 4.8187 9.8921 16.2862 12.0618 Dist. Traveled Rel. Error 0.0030 0.0061 0.0042 0.0317 0.0085 0.0562 0.0018 0.0078 0.0011 0.0002 *A relative error of less than 0.1000 indicates a good match.* Selected Figures 1 2 6 8 9 Top: Actual spider (Green), 5 Sim. spiders (Red), Actual prey (Blue) | Bottom: Distribution of 1000 sim. spiders, Actual time elapsed and Actual distance traveled (Red vertial line) Parameter Estimation Six parameters are esti- mated using a least squares optimization algorithm such that the time elapsed and distance traveled of the actual spider match the simulated spider. The figure on the left gives a visual comparison of the parameters of each spider indicating each spider is unique. Conclusions and Outlook We have expanded the model to simulate a realistic spider movement during prey capture. The current stochastic model now has pauses with varying duration, and the spider moves with varying velocities. We can further analyze the parameters to isolate a single parameter which works for each spider. If not, then we can have a distribution of parameters and isolate which parameters we can use for specific spiders. We can use the expanded model to determine if A. Studiosus disperse optimally by comparing dispersal configurations which are determined optimal for prey capture. References [1] B. Douglas, Tracker: Video Analysis and Modeling Tool, Tracker version 4.80, Copyright(c) (2013) Douglas Brown, http://www.cabrillo.edu/ dbrown/tracker, Free software [2] D.R. Brillinger, H.K. Preisler, A.A. Ager, J.G. Kie and B.S. Stewart, Modelling Movements of Free-Ranging Animals, Tech. Rep. 610, Department of Statistics, University of California, Berkeley (2001) [3] M.L. Joyner, C.R. Ross, C. Watts and T.C. Jones, A Stochastic Simulation Model for Anelosimus studiosus during Prey Capture: a Case Study for Determination of Optimal Spacing, Mathematical Biosciences and Engineering (Submitted for review), (2013) Acknowledgements This research project was supported by the National Science Foundation Grant #1128954. This research project was also partially supported by the Access and Diversity Initiative from the Tennessee Board of Regents, grant #210024. We would like to also acknowledge Colton Watts for all his work on this project. Contact Information: Alex John Quijano [email protected]

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Page 1: Expansion of a Stochastic Model for Anelosimus Studiosus ...€¦ · page.1 Expansion of a Stochastic Model for Anelosimus Studiosus Movement During Prey Capture Alex John Quijano1

page.1

Expansion of a Stochastic Model forAnelosimus Studiosus Movement During Prey Capture

Alex John Quijano1 | Dr. Michele L. Joyner1,3 | Dr. Thomas Jones2 | Nathaniel Hancock2 | Michael Largent2 | Chelsea Ross1

Department of Mathematics and Statistics1 | Department of Biological Sciences2 | Institute for Quantitative Biology3

East Tennessee State UniversityJohnson City, TN 37614

CRAWLCollaborative Researchon the Arthropod Way of LifeNSF grant #1128954

,

Introduction

A. Studiosus is a sub-social spider phenotype.The juveniles of the spi-der species stays withthere mother until ma-turity to help on webmaintenance and preycapture. Juveniles dis-perse throughout the web to cooperate during preycapture. The spiders use vibrational cues to detectthey prey.

Goal

To expand the stochastic model in order for us tosimulate a realistic movement during prey cap-ture of A. Studiosus.

Data Collection

The spiders were placedin shallow plastic boxesand housed in a lab-oratory setting. Dur-ing feeding sessions, themovement during preycapture is recorded us-

ing a high resolution camera. The movements werethen digitized using a tracking software [1]. The datacollected was analyzed to determine the factors in-volved for expanding the stochastic model.

Modified Factors

•The error in the direction the spider travelstowards the prey is taken from a normaldistribution with meane(d) = 0.0040d3−0.0688d2+0.3429d−0.0738 (1)

where d is the distance from the spider to theprey.

•The duration of pauses, velocity of runs, andduration of runs are all taken from an exponentialdistribution using the mean found from anoptimization algorithm.

The Stochastic Model

Eq. (2) was derived by Joyner and Ross et. al. [3]from the work by Brillinger and Preisler et. al. [2].

dr(t) = µ{r(t), t}dt + Σ{r(t), t}dW(t) (2)• r(t) = [Xs(t), Ys(t)]′ → Location at time t.• W(t) → Brownian motion.•dt → Change in time.• Σ{r(t), t}dt → Diffusion component.

Σ{r(t), t} =σx 0

0 σy

, σx = σy = σ

•µ{r(t), t} → Directional component.

µ{r(t), t} = vs

cos (θo(ti) + ε(t, di))sin (θo(ti) + ε(t, di))

θo(ti) → Optimal direction.ε(t, di) → Error in direction using mean from Eq. (1).tui → Update times i = {1, 2, · · · , n}.vs → Velocity

Expansion

Pauses and runs are included into the model usingthe algorithm in Figure 1. Let Dp be the durationof pause, Dr be the duration of run, Tp be the timerfor pauses, and Tr be the timer for runs.

Starting Positionat [Xs(0), Ys(0)].

Initial values:vs = 0, Dr = 0,Dp = 0, e(d) > 0,Tp = 0, Tr = 0,

i = 1

Is[Xs(t), Ys(t)]within the

capturedistance?

Updates:vs > 0θo(ti) > 0

Is vs = 0?

Tp = Tp + dt

Capture

Is Tp ≥ Dp?

Tr = Tr + dtt = t+ dt

Is Tr ≥ Dr?

Updates:vs = 0Dr > 0Dp > 0e(d) > 0Tp = 0Tr = 0i = i + 1

dr(t) = µ{r(t), t}dt+ Σ{r(t), t}dW(t)

· · ·

...

...

Y

N

Y

N

N

Y

N

Y

Figure 1: The Stochastic Model Algorithm.

Results

Spider 1 2 3 4 5 6 7 8 9 10Act. Time Elapsed (s) 4.8380 18.7180 2.2690 6.2070 4.5045 9.4000 8.5502 4.1291 24.2325 87.1704

Mean (1000) Sim. Time Elapsed (s) 4.8168 18.7428 2.2591 6.4080 4.5103 9.8384 8.5169 4.1002 24.3806 87.1152Time Elapsed Rel. Error 0.0044 0.0013 0.0044 0.0324 0.0013 0.0466 0.0039 0.0070 0.0061 0.0006Act. Dist. Traveled (cm) 7.6733 19.9008 5.7477 14.7958 6.6750 6.7534 4.8273 9.9694 16.2675 12.0595

Mean (1000) Sim. Dist. Traveled (cm) 7.6500 20.0214 5.7235 15.2653 6.7318 7.1328 4.8187 9.8921 16.2862 12.0618Dist. Traveled Rel. Error 0.0030 0.0061 0.0042 0.0317 0.0085 0.0562 0.0018 0.0078 0.0011 0.0002

*A relative error of less than 0.1000 indicates a good match.*

Selected Figures

1 2 6 8 9

Top: Actual spider (Green), 5 Sim. spiders (Red), Actual prey (Blue) | Bottom: Distribution of 1000 sim. spiders, Actual time elapsed and Actual distance traveled (Red vertial line)

Parameter Estimation

Six parameters are esti-mated using a least squaresoptimization algorithmsuch that the time elapsedand distance traveled ofthe actual spider matchthe simulated spider. Thefigure on the left gives avisual comparison of theparameters of each spider

indicating each spider is unique.

Conclusions and Outlook

•We have expanded the model to simulate a realistic spidermovement during prey capture.

•The current stochastic model now has pauses with varyingduration, and the spider moves with varying velocities.

•We can further analyze the parameters to isolate a singleparameter which works for each spider. If not, then we canhave a distribution of parameters and isolate whichparameters we can use for specific spiders.

•We can use the expanded model to determine if A.Studiosus disperse optimally by comparing dispersalconfigurations which are determined optimal for preycapture.

References

[1] B. Douglas, Tracker: Video Analysis and ModelingTool, Tracker version 4.80, Copyright(c) (2013) DouglasBrown, http://www.cabrillo.edu/ dbrown/tracker, Freesoftware

[2] D.R. Brillinger, H.K. Preisler, A.A. Ager, J.G. Kie andB.S. Stewart, Modelling Movements of Free-RangingAnimals, Tech. Rep. 610, Department of Statistics,University of California, Berkeley (2001)

[3] M.L. Joyner, C.R. Ross, C. Watts and T.C. Jones, AStochastic Simulation Model for Anelosimus studiosusduring Prey Capture: a Case Study for Determinationof Optimal Spacing, Mathematical Biosciences andEngineering (Submitted for review), (2013)

Acknowledgements

This research project was supported by the National ScienceFoundation Grant #1128954. This research project was alsopartially supported by the Access and Diversity Initiative fromthe Tennessee Board of Regents, grant #210024. We wouldlike to also acknowledge Colton Watts for all his work on thisproject.

Contact Information: Alex John Quijano → [email protected]