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Estimating long term yield of cod from BifrostSigurd Tjelmeland
Estimating long-term yield
• Must be done by long term simulation
• Since cod and capelin interact recruitment relations (recruits as function of spawning stock) for both cod and capelin are needed
Basics of Bifrost - Steps
• Calculate stochastic inputs– Capelin– Consumption per cod
• Estimate perameters
• Estimate recruitment relations
• Simulate
Basics of Bifrost(documented on www.imr.assessment)• Capelin-cod simulator
• Herring affects capelin recruitment– Forward simulations: Bifrost and SeaStar are coupled
• Input data– Stochastic September estimates of capelin– Catch data for capelin
• Monthly by age• Divided by maturing component
– Stochastic consumption per cod by quarter of• Capelin
• Cod
• Other food
– Cod assessment from Arctic Fisheries WG– Stochastic herring assessment from SeaStar
Basics of Bifrost(documented on www.imr.assessment)• Modelling
– Large number of recruitment relations per historic replicate, AIC– Overlap model depending on cod and capelin stock size– Cannibalism modelled after size distributions– Weight and maturation estimated internally, malformation of eggs implemented– Proportion immature capelin being preyed, proportion mature cod preying
• Estimation– Overall likelihood
• Capelin: Age 4 during 1970s, lognormal• Consumption by quarter of capelin,cod and other food, lognormal• Inner loop
– Capelin age 1– Cod age 0– Capelin residual M
• Other parameters
Recruitment in Bifrost• A large number of apriori possible formulations of the spawning stock – recruitment relation exist
– Part of the model uncertainty
– Estimates a large number on each historic replicate
– Draws one using Akaike’s weights for each run• Best balance between fit and number of parameters
• Capelin independent variables– Herring
– 0-group herring
– Temperature
– 0-group cod
– Inflection point
– Different levels of lowest herring abundance
• Cod independent variables– Temperature
– Mean weight
– Mean Age
• Possible estimation of exponents
• Lognormal, gamma, weibull
• Covariates possibly in halfvalue
• Different months for temperature in Kola section
Recruitment in Bifrost
0.5 1 1.5 2Spawning stock
200
400
600
800
Recruitment
89
89
90
90
96
96
97
97
98
9895
95
99
99
91
91
8484
00
00
9494
02
02
01
0192929393
200 400 600 800Model
200
400
600
800
1000
Rec
89
90
8177
83
79
80
96
74
75
73
82
97
76
98
95
78
99
91
84
00
94
0201
9293
0.2 0.4 0.6 0.8 1Spawning stock
0.5
1
1.5
2
2.5
3
3.5
Recruitment
95
95
94
94
83
83
75
75 90
90
8989
00
007373
88
88
91
91
92
92
81
817474
87
87
98
989999
97
97
96
96
8282
93
93
86868585
01
01
80
80
84
84
76
767979
78
78
77
77
1 2 3 4Model
0.5
1
1.5
2
2.5
3
3.5
Rec
9594
83
75
908900 73
88
91 92
81 7487
9899
9796
82
93
868501
8084
767978 77
Capelin Cod
Consumption by cod age 10Million tonnes per quarter
1980 1985 1990 1995 2000
0.0025
0.005
0.0075
0.01
0.0125
0.015
0.0175
Consumption of otherFoodBlue : SimulationRed : EmpiricalGreen : 0.1 Per cod
1980 1985 1990 1995 2000
0.001
0.002
0.003
0.004
0.005
0.006
0.007
Consumption of codBlue : SimulationRed : EmpiricalGreen : 0.1 Per cod
1980 1985 1990 1995 2000
0.0002
0.0004
0.0006
0.0008
0.001
0.0012
0.0014
Consumption of capelinBlue : SimulationRed : EmpiricalGreen : 0.1 Per cod
Consumption by cod age 4Million tonnes per quarter
1980 1985 1990 1995 2000
0.1
0.2
0.3
0.4
0.5
Consumption of otherFoodBlue : SimulationRed : EmpiricalGreen : 0.25 Per cod
1980 1985 1990 1995 2000
0.01
0.02
0.03
0.04
Consumption of codBlue : SimulationRed : EmpiricalGreen : 0.25 Per cod
1980 1985 1990 1995 2000
0.1
0.2
0.3
0.4
Consumption of capelinBlue : SimulationRed : EmpiricalGreen : 0.25 Per cod
Consumption by cod age 8Million tonnes per quarter
1980 1985 1990 1995 2000
0.02
0.04
0.06
0.08
Consumption of otherFoodBlue : SimulationRed : EmpiricalGreen : 0.125 Per cod
1980 1985 1990 1995 2000
0.0025
0.005
0.0075
0.01
0.0125
0.015
0.0175
Consumption of codBlue : SimulationRed : EmpiricalGreen : 0.125 Per cod
1980 1985 1990 1995 2000
0.005
0.01
0.015
0.02
0.025
Consumption of capelinBlue : SimulationRed : EmpiricalGreen : 0.125 Per codFit to data - Consumption
Fit to data - Capelin
1975 1980
20
40
60
80
Measured redand simulated bluefemale capelin , 4 years
1975 1980
20
40
60
80Measured redand simulated bluemale capelin , 4 years
1975 1980
50
100
150
200
250
Measured redand simulated bluefemale capelin , 3 years
1975 1980
50
100
150
200
250
Measured redand simulated bluemale capelin , 3 years
Results
0.2 0.4 0.6 0.8 1.
Catchmilliontonnes
0.2
0.3
0.4
0.5
Target spawning stockmilliontonnes
Longtermyield of capelinRelative F for cod 1.
0.01 0.5 1.0.5
1.
1.5
0.01 0.5 1.0.5
1.
1.5
0.3
0.55
0.8
0.
0.37
0.75
0.75 1. 1.25 1.5
Relative Fcod
0.5
0.6
0.7
Catchmilliontonnes Longterm yield of cod for capelin target SSB 0.5 million tonnes
Warning – periods of different productivity!
0.25 0.5 0.75 1 1.25 1.5 1.75
0.25
0.5
0.75
1
1.25
Equilibrium yield curves , WG assessmentRed : before1973Blue : 1973 and later
0.5 1 1.5 2
0.2
0.4
0.6
0.8
1
1.2
1.4