1
The ability to propagate stable states of chromatin activity is essential for nor- mal animal development; however, little is known about the mechanisms that maintain these heritable chromatin states. Morgan et al. 1 exploited the dominant mouse A vy mutation to look at epigenetic inheritance at this locus. This mutation causes variable ectopic expression of the agouti protein in hair follicles, such that A vy offspring of A vy animals exhibit a spectrum of coat- colour phenotypes, ranging from yellow (ectopic expression of the agouti gene) to full agouti (no ectopic silencing of the agouti gene). Variable expression of the A vy allele in A vy progeny is caused by the variable activity of an adjacent retroposon. However, it is also influ- enced by the maternal phenotype: A vy mothers with an agouti coat give birth to more offspring with an agouti pheno- type, whereas A vy mothers with a yellow coat give birth to more offspring with yellow and mottled phenotypes. Morgan et al. found that the A vy allele is more extensively methylated in A vy off- spring with an agouti coat than in A vy offspring with a yellow coat, indicating that chromatin modifications associated with the state of transcriptional activity at the maternal A vy allele are transmit- ted to the offspring. By embryo transfer experiments and genetic crosses, Morgan et al. excluded the maternal environment as a factor influencing A vy phenotypes, emphasizing the significance of the maternally transmitted chromatin modifications to gene silencing at this locus. 1 Morgan, H.D. et al. (1999) Epigenetic inheritance at the agouti locus in the mouse. Nat. Genet. 23, 314–318 Vincent Cunliffe v.t.cunliffe@ sheffield.ac.uk The serine/threonine protein kinase GSK3 is a key component of the Wnt signalling cascade that controls cell-fate decisions in metazoans. Binding of Wnt to the Frizzled serpentine receptors inhibits GSK3 activity, causing cyto- plasmic b-catenin to accumulate and be translocated to the nucleus to alter gene transcription. GSK3 is often perceived to be constitutively active or to have a basal kinase activity; however, maximal GSK3 activity requires the phosphoryl- ation of a conserved GSK3 tyrosine residue. A recent study 1 has shed light on this activation of the GSK3 pathway. In Dictyostelium, GSK3 activity is required for prespore cell differentiation and is differentially regulated by distinct cAMP serpentine receptors (cARs). cAMP binding to cAR3 stimulates GSK3 activity, whereas cAR4 negatively regu- lates GSK3 function. Together these receptors control axis formation in Dictyostelium. In a recent paper, Kim et al. 1 have identified a novel kinase, ZAK1, that is required for GSK acti- vation. ZAK1 is a cytosolic protein with a tyrosine kinase domain and a Ser/Thr kinase domain. It is activated in response to cAR3-mediated cAMP signalling and, in turn, activates GSK3. Kim et al. have demonstrated that the ZAK1 tyrosine kinase domain controls GSK3 function in vivo and is capable of phosphorylating and activating mammalian GSK3 in vitro. Parallels in controlling axis formation exist between Dictyostelium and meta- zoans. In both systems, it is controlled through serpentine receptors (Frizzled, cAMP receptors) that regulate GSK3 activity. It is possible that similarities extend beyond these components and that the regulation of GSK3 activity in some metazoans may require a ZAK1- like kinase. At present, little is known about GSK3 activation by tyrosine phos- phorylation, and the ZAK1 pathway in Dictyostelium might provide important and novel insights into the regulation of GSK3 for cell-fate decisions during multi- cellular development in other systems and, potentially, into the evolution of cell-fate regulatory networks. Regulation of GSK3 1 Kim, L. et al. (1999) The novel tyrosine kinase ZAK1 activates GSK3 to direct cell fate specification. Cell 99, 399–408 Richard A. Firtel [email protected] To determine how far the genome of Mycoplasma genitalium could be reduced without hampering its survival, Hutchison et al. 1 used large-scale transposon mutagenesis to establish a minimum genome size for an indepen- dently replicating cell living under laboratory conditions. They found that at least 129 genes in M. genitalium can be disrupted without lethal consequences. However, what constitutes such a mini- mal genome is, of course, relative to the environment it requires. Assuming a Poisson distribution of transposon insertions, the minimal gene set of M. genitalium consists of 265–350 protein- coding genes, with 180–215 non-essential genes, implying that at least 75% of the undisrupted genes are essential. One might expect that a large fraction of essential genes would be shared with many species – a core set of genes required for bacterial life. However, the disrupted gene set contains, for ex- ample, only one ribosomal protein. Nevertheless, 42 of the genes that were not disrupted are unique to the Mycoplasmas. Such genes could encode, for example, the Mycoplasma cytoskeleton that is unique to these bacteria. Thus, which genes constitute a minimal genome becomes a taxon-specific question, implying that there might be many, quite different, minimal genomes possible. Constructing a minimal genome 1 Hutchison, C.A. et al. (1999) Global transposon mutagenesis and a minimal mycoplasma genome. Science 286, 2165–2169 Martijn Huynen huynen@ embl-heidelberg.de Outlook JOURNAL CLUB TIG March 2000, volume 16, No. 3 116 Epigenetic inheritance of coat colour

Epigenetic inheritance of coat colour

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The ability to propagate stable states ofchromatin activity is essential for nor-mal animal development; however, littleis known about the mechanisms thatmaintain these heritable chromatinstates. Morgan et al.1 exploited thedominant mouse Avy mutation to lookat epigenetic inheritance at this locus.This mutation causes variable ectopicexpression of the agouti protein in hairfollicles, such that Avy offspring of Avy

animals exhibit a spectrum of coat-colour phenotypes, ranging from yellow(ectopic expression of the agouti gene)to full agouti (no ectopic silencing of

the agouti gene). Variable expression ofthe Avy allele in Avy progeny is caused by the variable activity of an adjacentretroposon. However, it is also influ-enced by the maternal phenotype: Avy

mothers with an agouti coat give birthto more offspring with an agouti pheno-type, whereas Avy mothers with a yellowcoat give birth to more offspring withyellow and mottled phenotypes.Morgan et al. found that the Avy allele ismore extensively methylated in Avy off-spring with an agouti coat than in Avy

offspring with a yellow coat, indicatingthat chromatin modifications associated

with the state of transcriptional activityat the maternal Avy allele are transmit-ted to the offspring. By embryo transferexperiments and genetic crosses,Morgan et al. excluded the maternalenvironment as a factor influencing Avy phenotypes, emphasizing the significance of the maternally transmitted chromatin modifications togene silencing at this locus.

1 Morgan, H.D. et al. (1999) Epigeneticinheritance at the agouti locus in the mouse.Nat. Genet. 23, 314–318

Vincent Cunliffe

[email protected]

The serine/threonine protein kinaseGSK3 is a key component of the Wntsignalling cascade that controls cell-fatedecisions in metazoans. Binding of Wntto the Frizzled serpentine receptorsinhibits GSK3 activity, causing cyto-plasmic b-catenin to accumulate and betranslocated to the nucleus to alter genetranscription. GSK3 is often perceivedto be constitutively active or to have abasal kinase activity; however, maximalGSK3 activity requires the phosphoryl-ation of a conserved GSK3 tyrosineresidue. A recent study1 has shed lighton this activation of the GSK3 pathway.

In Dictyostelium, GSK3 activity isrequired for prespore cell differentiationand is differentially regulated by distinct

cAMP serpentine receptors (cARs).cAMP binding to cAR3 stimulates GSK3activity, whereas cAR4 negatively regu-lates GSK3 function. Together thesereceptors control axis formation inDictyostelium. In a recent paper, Kim et al.1 have identified a novel kinase,ZAK1, that is required for GSK acti-vation. ZAK1 is a cytosolic protein with a tyrosine kinase domain and a Ser/Thrkinase domain. It is activated in responseto cAR3-mediated cAMP signalling and,in turn, activates GSK3. Kim et al. havedemonstrated that the ZAK1 tyrosinekinase domain controls GSK3 function invivo and is capable of phosphorylatingand activating mammalian GSK3 in vitro.Parallels in controlling axis formation

exist between Dictyostelium and meta-zoans. In both systems, it is controlledthrough serpentine receptors (Frizzled,cAMP receptors) that regulate GSK3activity. It is possible that similaritiesextend beyond these components andthat the regulation of GSK3 activity insome metazoans may require a ZAK1-like kinase. At present, little is knownabout GSK3 activation by tyrosine phos-phorylation, and the ZAK1 pathway inDictyostelium might provide importantand novel insights into the regulation ofGSK3 for cell-fate decisions during multi-cellular development in other systemsand, potentially, into the evolution ofcell-fate regulatory networks.

Regulation of GSK3

1 Kim, L. et al. (1999) The novel tyrosine kinaseZAK1 activates GSK3 to direct cell fatespecification. Cell 99, 399–408

Richard A. Firtel

[email protected]

To determine how far the genome ofMycoplasma genitalium could bereduced without hampering its survival,Hutchison et al.1 used large-scale transposon mutagenesis to establish aminimum genome size for an indepen-dently replicating cell living under laboratory conditions. They found thatat least 129 genes in M. genitalium canbe disrupted without lethal consequences.However, what constitutes such a mini-mal genome is, of course, relative to theenvironment it requires. Assuming aPoisson distribution of transposon

insertions, the minimal gene set of M.genitalium consists of 265–350 protein-coding genes, with 180–215 non-essentialgenes, implying that at least 75% of theundisrupted genes are essential. Onemight expect that a large fraction ofessential genes would be shared withmany species – a core set of genesrequired for bacterial life. However, thedisrupted gene set contains, for ex-ample, only one ribosomal protein.Nevertheless, 42 of the genes that werenot disrupted are unique to theMycoplasmas. Such genes could

encode, for example, the Mycoplasmacytoskeleton that is unique to these bacteria. Thus, which genes constitute a minimal genome becomes a taxon-specific question, implying thatthere might be many, quite different,minimal genomes possible.

Constructing a minimal genome

1 Hutchison, C.A. et al. (1999) Global transposonmutagenesis and a minimal mycoplasmagenome. Science 286, 2165–2169

Martijn Huynen

[email protected]

Outlook JOURNAL CLUB

TIG March 2000, volume 16, No. 3116

Epigenetic inheritance of coat colour