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Epidemic fitness of Phytophthora infestans in foliage foliage and tubers as related to future developments developments of aggressiveness Trudy van den Bosch and Geert Kessel

Epidemic fitness of Phytophthora infestans in foliage ... · 2005 Mondial 2006 Ia IIa Ib Mixture Ia Isolate IIa Isolate Ib Isolate 0 0. 2 0.4 0. 6 0. 8 1 Foliage 1 Foliage 2 Tuber

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Page 1: Epidemic fitness of Phytophthora infestans in foliage ... · 2005 Mondial 2006 Ia IIa Ib Mixture Ia Isolate IIa Isolate Ib Isolate 0 0. 2 0.4 0. 6 0. 8 1 Foliage 1 Foliage 2 Tuber

Epidemic fitness of Phytophthora infestans in foliage foliage and tubers as related to future developments developments of aggressiveness

Trudy van den Bosch and Geert Kessel

Page 2: Epidemic fitness of Phytophthora infestans in foliage ... · 2005 Mondial 2006 Ia IIa Ib Mixture Ia Isolate IIa Isolate Ib Isolate 0 0. 2 0.4 0. 6 0. 8 1 Foliage 1 Foliage 2 Tuber

Outline

IntroductionGoalsLaboratory experiments

Aggressiveness to foliageAggressiveness to tubers

Field experimentsSetupFoliar epidemicTuber infection

Discussion and conclusions

Page 3: Epidemic fitness of Phytophthora infestans in foliage ... · 2005 Mondial 2006 Ia IIa Ib Mixture Ia Isolate IIa Isolate Ib Isolate 0 0. 2 0.4 0. 6 0. 8 1 Foliage 1 Foliage 2 Tuber

Introduction

Page 4: Epidemic fitness of Phytophthora infestans in foliage ... · 2005 Mondial 2006 Ia IIa Ib Mixture Ia Isolate IIa Isolate Ib Isolate 0 0. 2 0.4 0. 6 0. 8 1 Foliage 1 Foliage 2 Tuber

Introduction

Sexual population

Clonal population

Page 5: Epidemic fitness of Phytophthora infestans in foliage ... · 2005 Mondial 2006 Ia IIa Ib Mixture Ia Isolate IIa Isolate Ib Isolate 0 0. 2 0.4 0. 6 0. 8 1 Foliage 1 Foliage 2 Tuber

Goals

Optimal set(s) of fitness parameters for survival of P. infestans in summer and winter?

Trade off’s between summer and winter survival?

Estimate optimal parameter set(s) for summer AND winter survival

Page 6: Epidemic fitness of Phytophthora infestans in foliage ... · 2005 Mondial 2006 Ia IIa Ib Mixture Ia Isolate IIa Isolate Ib Isolate 0 0. 2 0.4 0. 6 0. 8 1 Foliage 1 Foliage 2 Tuber

Potato cultivars and resistance levels

Cultivar Foliar resistance rating Tuber resistance rating

Karakter (Starch) 6 5

Mondial (Ware) 4.5 5.5

Remarka (Ware) 6.5 8.5

Page 7: Epidemic fitness of Phytophthora infestans in foliage ... · 2005 Mondial 2006 Ia IIa Ib Mixture Ia Isolate IIa Isolate Ib Isolate 0 0. 2 0.4 0. 6 0. 8 1 Foliage 1 Foliage 2 Tuber

P. infestans isolates and characteristics

Isolate Location Host Year Haplo type Mating type

NL00228 Dinteloord S. tuberosum 2000 Ib A2

NL01096 Katshaar S. tuberosum 2001 IIa A2

NL01900 Wageningen S. sisymbriifolium 2001 Ia A1

Ia Ib IIa Ia Ib IIa

P2 P4

Page 8: Epidemic fitness of Phytophthora infestans in foliage ... · 2005 Mondial 2006 Ia IIa Ib Mixture Ia Isolate IIa Isolate Ib Isolate 0 0. 2 0.4 0. 6 0. 8 1 Foliage 1 Foliage 2 Tuber

Differential interaction between cultivars & isolates

A B C

Ib IIa Ia Ib IIa Ia Ib IIa Ia

Karakter Mondial Remarka

Page 9: Epidemic fitness of Phytophthora infestans in foliage ... · 2005 Mondial 2006 Ia IIa Ib Mixture Ia Isolate IIa Isolate Ib Isolate 0 0. 2 0.4 0. 6 0. 8 1 Foliage 1 Foliage 2 Tuber

Laboratory experiments

Infection experiments on foliageIE, LP, LGR & SPOR

Infection experiments on tubersIEtuber & LGRtuber

Page 10: Epidemic fitness of Phytophthora infestans in foliage ... · 2005 Mondial 2006 Ia IIa Ib Mixture Ia Isolate IIa Isolate Ib Isolate 0 0. 2 0.4 0. 6 0. 8 1 Foliage 1 Foliage 2 Tuber

Infection experiments on foliageKarakter Remarka Mondial

IE [-]Ia 0.029 0.008 0.036IIa 0.008 0.008 0.023Ib 0.003 0 0.02

LGR [mm/ dag]Ia 3.8 2.5 3.7IIa 3.6 2.7 3.2Ib 2.1 0.2 3.7

SPOR [sp/ mm²]Ia 206 89 217IIa 143 101 208Ib 113 0 164

LP [dagen]Ia 5.1 6.1 5IIa 5.2 5.2 4.7Ib 7.4 >10* 4.6

R0 [-]Ia 1158 133 1543IIa 231 167 920Ib 63 0 635

r [dag-1]Ia 0.75 0.39 0.78IIa 0.55 0.45 0.68Ib 0.27 0 0.71

Skelsey et al 2005:

Page 11: Epidemic fitness of Phytophthora infestans in foliage ... · 2005 Mondial 2006 Ia IIa Ib Mixture Ia Isolate IIa Isolate Ib Isolate 0 0. 2 0.4 0. 6 0. 8 1 Foliage 1 Foliage 2 Tuber

Infection experiments on tubers

IEtuber on intact tuber eyes: (statistically significant cultivar effect)

LGRtuber: (statistically significant cultivar* isolate interaction)(LSD = 1.2)

Karakter (5) Mondial (5.5)

Remarka (9)

Diseased tubers (%) 2.5 a 26.5 b 2.2 a

LGR tuber (mm/ day) Karakter Mondial RemarkaIb 2.2 4.2 3.4Ia 1.7 4.9 3.8IIa 5.1 5.6 4.4

Page 12: Epidemic fitness of Phytophthora infestans in foliage ... · 2005 Mondial 2006 Ia IIa Ib Mixture Ia Isolate IIa Isolate Ib Isolate 0 0. 2 0.4 0. 6 0. 8 1 Foliage 1 Foliage 2 Tuber

Field experiment set up 2005 & 20064 isolate blocks containing:

3 cultivars3 replicates3 Sampling times

Mixed inoculum

IIA isolate

10 meter

1

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IA isolate

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Page 13: Epidemic fitness of Phytophthora infestans in foliage ... · 2005 Mondial 2006 Ia IIa Ib Mixture Ia Isolate IIa Isolate Ib Isolate 0 0. 2 0.4 0. 6 0. 8 1 Foliage 1 Foliage 2 Tuber

Field experiments, foliar epidemics

0

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Page 14: Epidemic fitness of Phytophthora infestans in foliage ... · 2005 Mondial 2006 Ia IIa Ib Mixture Ia Isolate IIa Isolate Ib Isolate 0 0. 2 0.4 0. 6 0. 8 1 Foliage 1 Foliage 2 Tuber

Karakter

Page 15: Epidemic fitness of Phytophthora infestans in foliage ... · 2005 Mondial 2006 Ia IIa Ib Mixture Ia Isolate IIa Isolate Ib Isolate 0 0. 2 0.4 0. 6 0. 8 1 Foliage 1 Foliage 2 Tuber

Remarka

Page 16: Epidemic fitness of Phytophthora infestans in foliage ... · 2005 Mondial 2006 Ia IIa Ib Mixture Ia Isolate IIa Isolate Ib Isolate 0 0. 2 0.4 0. 6 0. 8 1 Foliage 1 Foliage 2 Tuber

Mondial

Page 17: Epidemic fitness of Phytophthora infestans in foliage ... · 2005 Mondial 2006 Ia IIa Ib Mixture Ia Isolate IIa Isolate Ib Isolate 0 0. 2 0.4 0. 6 0. 8 1 Foliage 1 Foliage 2 Tuber

Genotype dynamics on “Karakter”2005 Karakter 2006

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Page 18: Epidemic fitness of Phytophthora infestans in foliage ... · 2005 Mondial 2006 Ia IIa Ib Mixture Ia Isolate IIa Isolate Ib Isolate 0 0. 2 0.4 0. 6 0. 8 1 Foliage 1 Foliage 2 Tuber

Genotype dynamics on “Remarka”2005 Remarka 2006

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Page 19: Epidemic fitness of Phytophthora infestans in foliage ... · 2005 Mondial 2006 Ia IIa Ib Mixture Ia Isolate IIa Isolate Ib Isolate 0 0. 2 0.4 0. 6 0. 8 1 Foliage 1 Foliage 2 Tuber

2005 Mondial 2006

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Genotype dynamics on “Mondial”

Page 20: Epidemic fitness of Phytophthora infestans in foliage ... · 2005 Mondial 2006 Ia IIa Ib Mixture Ia Isolate IIa Isolate Ib Isolate 0 0. 2 0.4 0. 6 0. 8 1 Foliage 1 Foliage 2 Tuber

Conclusions

Laboratory experimentsAggressiveness to foliage (composite parameters R0 & r)

• Karakter Ia > IIa >> Ib• Remarka IIa ≥ Ia, Ib non compatible• Mondial Ia ≥ IIa = Ib

Aggressiveness to tubers• IEtuber: Cultivar effect Mondial >> Karakter = Remarka• LGRtuber: Cultivar * Isolate interaction:

– Karakter IIa >> Ia > Ib– Remarka IIa > Ia > Ib– Mondial IIa > Ia > Ib

Page 21: Epidemic fitness of Phytophthora infestans in foliage ... · 2005 Mondial 2006 Ia IIa Ib Mixture Ia Isolate IIa Isolate Ib Isolate 0 0. 2 0.4 0. 6 0. 8 1 Foliage 1 Foliage 2 Tuber

Conclusions

Field experimentsFoliar epidemic

• Establishment– Karakter IIa > Ia >> Ib (almost incompatible)– Remarka IIa > Ia >> Ib (almost incompatible)– Mondial IIa = Ia > Ib

• Epidemic progress – Karakter Ia > IIa >> Ib– Remarka Ia > IIa >> Ib– Mondial Ia > IIa > Ib

Page 22: Epidemic fitness of Phytophthora infestans in foliage ... · 2005 Mondial 2006 Ia IIa Ib Mixture Ia Isolate IIa Isolate Ib Isolate 0 0. 2 0.4 0. 6 0. 8 1 Foliage 1 Foliage 2 Tuber

Conclusions

Field experimentsTransition to tubers

• Karakter Ia > IIa >> Ib• Remarka Ia > IIa >> Ib• Mondial Ia > IIa >> Ib

Page 23: Epidemic fitness of Phytophthora infestans in foliage ... · 2005 Mondial 2006 Ia IIa Ib Mixture Ia Isolate IIa Isolate Ib Isolate 0 0. 2 0.4 0. 6 0. 8 1 Foliage 1 Foliage 2 Tuber

Conclusions

Field experiments (General)IIa better in establishmentIa better in competing for limited spaceIa better in transition to tubers

Overall: Ia isolate better position to survive summer AND winter on all three cultivars

Transition from tuber to foliage not included in experiments

Page 24: Epidemic fitness of Phytophthora infestans in foliage ... · 2005 Mondial 2006 Ia IIa Ib Mixture Ia Isolate IIa Isolate Ib Isolate 0 0. 2 0.4 0. 6 0. 8 1 Foliage 1 Foliage 2 Tuber

Conclusions

Comparison Lab & Field experiments:Foliage

• Single parameters lab. Exp.’s do not predict competitive outcome (IE difficult and not reliable for establishment)

• Composite parameters better predictors (epidemic progress)

Tubers• IEtuber and LGRtuber not good predictors of tuber population

Success in foliage is large part of success in tubers !

Page 25: Epidemic fitness of Phytophthora infestans in foliage ... · 2005 Mondial 2006 Ia IIa Ib Mixture Ia Isolate IIa Isolate Ib Isolate 0 0. 2 0.4 0. 6 0. 8 1 Foliage 1 Foliage 2 Tuber

Overall ConclusionsLimited set of cultivars and isolates!

No trade off between aggressiveness to foliage and aggressiveness to tubers, aggressiveness pays off!

within this set of cultivars and isolateswithout the influence of modern storage regimes

Establishment, multiplication and transition to tubers key processesPopulation dynamics in foliage strongly linked to population population (dynamics) in tubers

Page 26: Epidemic fitness of Phytophthora infestans in foliage ... · 2005 Mondial 2006 Ia IIa Ib Mixture Ia Isolate IIa Isolate Ib Isolate 0 0. 2 0.4 0. 6 0. 8 1 Foliage 1 Foliage 2 Tuber

Thank you for your attention

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