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DYN R&D a member of the DYN Diagnostics Group · •DYN R&D was founded in 2007 to provide advanced molecular assays for the seeds industry, including: DNA marker tests for breeders

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Page 1: DYN R&D a member of the DYN Diagnostics Group · •DYN R&D was founded in 2007 to provide advanced molecular assays for the seeds industry, including: DNA marker tests for breeders
Page 2: DYN R&D a member of the DYN Diagnostics Group · •DYN R&D was founded in 2007 to provide advanced molecular assays for the seeds industry, including: DNA marker tests for breeders

DYN R&D a member of the DYN Diagnostics Group

DYN Diagnostics

DYN R&D DYN LabsDYN Medical

Equipment

Page 3: DYN R&D a member of the DYN Diagnostics Group · •DYN R&D was founded in 2007 to provide advanced molecular assays for the seeds industry, including: DNA marker tests for breeders

What How and Where

What? Genotyping DNA markers:

• Trait specific markers.

• Purity testing markers

How? Ready to use kits or full services.

Where? Dominant in local market. Significant

presence in various countries.

Page 4: DYN R&D a member of the DYN Diagnostics Group · •DYN R&D was founded in 2007 to provide advanced molecular assays for the seeds industry, including: DNA marker tests for breeders

Background

• DYN R&D was founded in 2007 to provide advanced molecular assays for the seeds industry, including:

DNA marker tests for breeders and vegetables seed producers

Efficient diagnostic tools: fast, accurate and cost effectives.

The world QA standard pre- and post-control purity tests of parent lines and hybrid seeds

Page 5: DYN R&D a member of the DYN Diagnostics Group · •DYN R&D was founded in 2007 to provide advanced molecular assays for the seeds industry, including: DNA marker tests for breeders

About Us

• Our R&D partner is the BonTom tomato breeding group, at the R H Smith Faculty of Agriculture, Food and Environment, the Hebrew University of Jerusalem, headed by world expert: Prof. Haim D. Rabinowitch.

Page 6: DYN R&D a member of the DYN Diagnostics Group · •DYN R&D was founded in 2007 to provide advanced molecular assays for the seeds industry, including: DNA marker tests for breeders

• Our work professional teams consist of: Molecular biology experts; Bio-technology engineers; Application support group; A leading team of plant geneticists, plant physiologists and plant pathologists.

• Being a member of DYN Diagnostics Group, guaranteed our financial strength and enables significant investments in R&D.

About Us

Page 7: DYN R&D a member of the DYN Diagnostics Group · •DYN R&D was founded in 2007 to provide advanced molecular assays for the seeds industry, including: DNA marker tests for breeders

Genotype DNA markersAdvance Vs. Conventional

420 min for 96 results

Up to 600 results per day

~75 min for 96\384 results

Thousands results per day

DNA extraction

PCR (~150 min)

Enzymatic restriction (180 min)

Agarose gel separation (60 min)

Analyze 96 results (~30 min)

Short PCR (>60 min)

Melt (~15 min)

Automatic analyze 96 results (~2 min)

Page 8: DYN R&D a member of the DYN Diagnostics Group · •DYN R&D was founded in 2007 to provide advanced molecular assays for the seeds industry, including: DNA marker tests for breeders

Genotype DNA marker testsWorkflow

Plant tissue

X96SuperFast DNA

extraction, 2min

Amplification +

Melt, 75minAnalysis,

20min

Page 9: DYN R&D a member of the DYN Diagnostics Group · •DYN R&D was founded in 2007 to provide advanced molecular assays for the seeds industry, including: DNA marker tests for breeders

• SimpleProbe probes consist of only one oligonucleotide, which carries a fluorescent dye and a quencher linked directly to each

other.

•. With SimpleProbe format,

LightCycler® 480 Software

monitors the decrease in

fluorescence during the post

PCR melting step.

• Because of their conformation, fluorescence is quenched in solution but activated after binding to the target sequence.

Page 10: DYN R&D a member of the DYN Diagnostics Group · •DYN R&D was founded in 2007 to provide advanced molecular assays for the seeds industry, including: DNA marker tests for breeders

Tests menu

• Tomato markers:• MAS, MAB markers, pathogen resistance and

morphological traits.

• Tomato Purity Markers: Unique set of fingerprinting markers

• Pepper, melons and more.

Page 11: DYN R&D a member of the DYN Diagnostics Group · •DYN R&D was founded in 2007 to provide advanced molecular assays for the seeds industry, including: DNA marker tests for breeders
Page 12: DYN R&D a member of the DYN Diagnostics Group · •DYN R&D was founded in 2007 to provide advanced molecular assays for the seeds industry, including: DNA marker tests for breeders

Tomato Ty-1 test

Page 13: DYN R&D a member of the DYN Diagnostics Group · •DYN R&D was founded in 2007 to provide advanced molecular assays for the seeds industry, including: DNA marker tests for breeders

Why Tomatoes

• Tomato seeds are sold for an average of 10,000$ a kilo (of seeds).

• The Tomato seeds market is a very competitive as new varieties and advanced varieties are released annually.

• Seeds companies invest heavily to meet the growing demand for improved tomato hybrid seeds.

Page 14: DYN R&D a member of the DYN Diagnostics Group · •DYN R&D was founded in 2007 to provide advanced molecular assays for the seeds industry, including: DNA marker tests for breeders

Why Tomato purity?

• Tomato hybrid seeds production consists of hand pollination of the stigma.

• Purity verification is highly important as impurities cause heavy losses to both the seed company and the growers.

Page 15: DYN R&D a member of the DYN Diagnostics Group · •DYN R&D was founded in 2007 to provide advanced molecular assays for the seeds industry, including: DNA marker tests for breeders

Universal code for tomato\pepperhybrids

• Product Objectives:• Positive verification of the product authenticity• Detecting even minute self pollination impurities. • Detection of any other impurities, e.g., mechanical mix, error

pollination, wrong labeling, and more.

• Product Principals:– Universal test- all genotypes are tested using method single

methodology.– Maximum automation and objective process free of human

input. Hardware & Software.– Multi parameter test and yet time and cost effective.

Page 16: DYN R&D a member of the DYN Diagnostics Group · •DYN R&D was founded in 2007 to provide advanced molecular assays for the seeds industry, including: DNA marker tests for breeders

Test limitations:

• Test ∞ parameters,– For example: sequence whole genome

– Danger: Detect even Pure seeds as Impure.

False positive.

• Test 1 parameter,– For example: test one DNA marker-Tm2a

– Danger: Detect different- Impure seeds as identical- Pure. False negative.

•Test ∞ SNP’sparameters

Page 17: DYN R&D a member of the DYN Diagnostics Group · •DYN R&D was founded in 2007 to provide advanced molecular assays for the seeds industry, including: DNA marker tests for breeders

Product principals, terminology.

• Each sample is being tested for 8 SNP’s: Test1- Test8. Test1, test2,… Test8. T1, T2,…T8.

• Each Test (T1-T8) results in one of 3 possible (output)

alternatives: 1 or 2 or 3.

RedHomozygote aaa

BlueHomozygote AAA3

GreenHeterozygoteAa2

Page 18: DYN R&D a member of the DYN Diagnostics Group · •DYN R&D was founded in 2007 to provide advanced molecular assays for the seeds industry, including: DNA marker tests for breeders

Product principals, terminology.

• Each sample tested for 8 SNP’s: Test1- Test8.

Test1, test2,… Test8. T1, T2,…T8.

• Each Test (T1-T8) has 3 possible results (output): 1 or 2 or 3.

T8T7T6T5T4T3T2T1

1223

38= 6,561 different codes. For hybrids.

28= 256 different codes. For parents.

A new standard QA test for tomato hybrids.

The worlds 1st hybrid barcode printer

Page 19: DYN R&D a member of the DYN Diagnostics Group · •DYN R&D was founded in 2007 to provide advanced molecular assays for the seeds industry, including: DNA marker tests for breeders

Some files

Page 20: DYN R&D a member of the DYN Diagnostics Group · •DYN R&D was founded in 2007 to provide advanced molecular assays for the seeds industry, including: DNA marker tests for breeders

Why

World breeding expert partners.

Very efficient tomato purity test

Cost effective.

Flexible to customer needs.

Ready to use kits or full service.

Page 21: DYN R&D a member of the DYN Diagnostics Group · •DYN R&D was founded in 2007 to provide advanced molecular assays for the seeds industry, including: DNA marker tests for breeders