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DNA and Replication

DNA and Replication · 2018-04-02 · Semi-Conservative Replication •New DNA molecules have one original template strand and one new strand •Follows complementary base pair rules

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Page 1: DNA and Replication · 2018-04-02 · Semi-Conservative Replication •New DNA molecules have one original template strand and one new strand •Follows complementary base pair rules

DNA and Replication

Page 2: DNA and Replication · 2018-04-02 · Semi-Conservative Replication •New DNA molecules have one original template strand and one new strand •Follows complementary base pair rules

DNA: The Primary Source of Heritable Information

• Genetic information is transmitted from one generation to the next through DNA or RNA

Page 3: DNA and Replication · 2018-04-02 · Semi-Conservative Replication •New DNA molecules have one original template strand and one new strand •Follows complementary base pair rules

Chromosomes

• Non-eukaryotic (bacteria) organisms have circular chromosomes

• Eukaryotic organisms have multiple linear chromosomes

• Exceptions:

– Some bacterial cells have linear chromosomes

– Mitochondria and chloroplasts have been found to have circular and linear chromosomes

Page 4: DNA and Replication · 2018-04-02 · Semi-Conservative Replication •New DNA molecules have one original template strand and one new strand •Follows complementary base pair rules
Page 5: DNA and Replication · 2018-04-02 · Semi-Conservative Replication •New DNA molecules have one original template strand and one new strand •Follows complementary base pair rules

Plasmids

• Prokaryotes, viruses and eukaryotes (yeast) may contain plasmids

• Plasmids are small extra-chromosomal, double-stranded circular DNA molecules

• Plasmids make excellent cloning vectors

Page 6: DNA and Replication · 2018-04-02 · Semi-Conservative Replication •New DNA molecules have one original template strand and one new strand •Follows complementary base pair rules

Plasmids as Cloning Vectors

Page 7: DNA and Replication · 2018-04-02 · Semi-Conservative Replication •New DNA molecules have one original template strand and one new strand •Follows complementary base pair rules

Important Historical Experiments

• The proof that DNA is the carrier of genetic information involved a number of important historical experiments, including:

– Frederick Griffith

–Avery-MacLeod-McCarty

–Hershey-Chase

–Watson, Crick, Wilkins and Franklin

Page 8: DNA and Replication · 2018-04-02 · Semi-Conservative Replication •New DNA molecules have one original template strand and one new strand •Follows complementary base pair rules

Frederick Griffith • 1928 - Experiments in bacterial transformation

• Smooth (S) pathogenic bacteria

• Rough (R) nonpathogenic bacteria

Page 9: DNA and Replication · 2018-04-02 · Semi-Conservative Replication •New DNA molecules have one original template strand and one new strand •Follows complementary base pair rules

Frederick Griffith • Living bacterial cells were converted to

disease causing bacteria (transformation)

• “Transforming factor”

ANIMATION

Page 10: DNA and Replication · 2018-04-02 · Semi-Conservative Replication •New DNA molecules have one original template strand and one new strand •Follows complementary base pair rules

Avery-MacLeod-McCarty Experiments

• Experiments demonstrated that DNA is the “transforming” material, not protein

Page 11: DNA and Replication · 2018-04-02 · Semi-Conservative Replication •New DNA molecules have one original template strand and one new strand •Follows complementary base pair rules

Avery-MacLeod-McCarty Experiments

• Used different enzymes to destroy protein, RNA or DNA in separate tubes to determine if transformation occurs

Page 12: DNA and Replication · 2018-04-02 · Semi-Conservative Replication •New DNA molecules have one original template strand and one new strand •Follows complementary base pair rules

Hershey-Chase Experiment

• 1952 - Concluded that DNA, not protein, functions as the genetic material of phage T2

Page 14: DNA and Replication · 2018-04-02 · Semi-Conservative Replication •New DNA molecules have one original template strand and one new strand •Follows complementary base pair rules

Erwin Chargaff

• 1952 - Nitrogenous base composition

• % of adenine is equal to % of thymine

• % of guanine is equal to % cytosine

• Composition of DNA varies from species to species

Page 15: DNA and Replication · 2018-04-02 · Semi-Conservative Replication •New DNA molecules have one original template strand and one new strand •Follows complementary base pair rules

Maurice Wilkins and Rosalind Franklin

• 1951 - Worked with a technique called X-ray diffraction

• Determined the helical nature of DNA

Page 16: DNA and Replication · 2018-04-02 · Semi-Conservative Replication •New DNA molecules have one original template strand and one new strand •Follows complementary base pair rules

James Watson and Francis Crick

• 1953 – Determined the structure of DNA using Chargaff’s and Franklin’s data

• Franklin’s picture showed two strands of nucleotides

Page 17: DNA and Replication · 2018-04-02 · Semi-Conservative Replication •New DNA molecules have one original template strand and one new strand •Follows complementary base pair rules

DNA (Deoxyribonucleic acid)

• Nucleic acid

• Consists of monomers called nucleotides

• Stores genetic information, determines an organisms traits by synthesizing proteins

• Each organisms genome is unique

Page 18: DNA and Replication · 2018-04-02 · Semi-Conservative Replication •New DNA molecules have one original template strand and one new strand •Follows complementary base pair rules
Page 19: DNA and Replication · 2018-04-02 · Semi-Conservative Replication •New DNA molecules have one original template strand and one new strand •Follows complementary base pair rules

Structure of DNA

• Double helix

• Consists of a double strand of nucleotides

• Two strands are anti-parallel: strands are oriented in opposite directions

–5’ to 3’

–3’ to 5’

ANIMATION

Page 20: DNA and Replication · 2018-04-02 · Semi-Conservative Replication •New DNA molecules have one original template strand and one new strand •Follows complementary base pair rules
Page 21: DNA and Replication · 2018-04-02 · Semi-Conservative Replication •New DNA molecules have one original template strand and one new strand •Follows complementary base pair rules

Nucleotide Composition

• Three parts of a nucleotide

– 5 carbon sugar called deoxyribose

–Phosphate group

–A single nitrogenous base

Page 22: DNA and Replication · 2018-04-02 · Semi-Conservative Replication •New DNA molecules have one original template strand and one new strand •Follows complementary base pair rules

Four Nitrogenous Bases

• Purines (double ring)

– Adenine (A)

– Guanine (G)

• Pyrimidines (single ring)

– Thymine (T)

– Cytosine (C)

Page 23: DNA and Replication · 2018-04-02 · Semi-Conservative Replication •New DNA molecules have one original template strand and one new strand •Follows complementary base pair rules

Purines pair with Pyrimidines

Page 24: DNA and Replication · 2018-04-02 · Semi-Conservative Replication •New DNA molecules have one original template strand and one new strand •Follows complementary base pair rules

Chargaff’s Rules

• A-T (2 hydrogen bonds)

• C-G (3 hydrogen bonds)

Page 25: DNA and Replication · 2018-04-02 · Semi-Conservative Replication •New DNA molecules have one original template strand and one new strand •Follows complementary base pair rules
Page 26: DNA and Replication · 2018-04-02 · Semi-Conservative Replication •New DNA molecules have one original template strand and one new strand •Follows complementary base pair rules

DNA Replication

Page 27: DNA and Replication · 2018-04-02 · Semi-Conservative Replication •New DNA molecules have one original template strand and one new strand •Follows complementary base pair rules

Why do cells need to replicate DNA?

Page 28: DNA and Replication · 2018-04-02 · Semi-Conservative Replication •New DNA molecules have one original template strand and one new strand •Follows complementary base pair rules

Semi-Conservative Replication

• New DNA molecules have one original template strand and one new strand

• Follows complementary base pair rules and begins at sites called origins of replication

• “Leading strand” – continuously synthesized

• “Lagging strand” – synthesized in fragments

ANIMATION

Page 29: DNA and Replication · 2018-04-02 · Semi-Conservative Replication •New DNA molecules have one original template strand and one new strand •Follows complementary base pair rules

Semi-conservative Replication

Page 30: DNA and Replication · 2018-04-02 · Semi-Conservative Replication •New DNA molecules have one original template strand and one new strand •Follows complementary base pair rules

Origin of Replication - Prokaryotes

Page 31: DNA and Replication · 2018-04-02 · Semi-Conservative Replication •New DNA molecules have one original template strand and one new strand •Follows complementary base pair rules

Origins of Replication - Eukaryotes

Page 32: DNA and Replication · 2018-04-02 · Semi-Conservative Replication •New DNA molecules have one original template strand and one new strand •Follows complementary base pair rules

Replication Bubbles

Page 33: DNA and Replication · 2018-04-02 · Semi-Conservative Replication •New DNA molecules have one original template strand and one new strand •Follows complementary base pair rules

Enzyme Functions

• Helicase

• RNA Primase

• DNA Polymerase III

• DNA Polymerase I

• DNA Ligase

• Topoisomerase

• Single-strand binding proteins (not an enzyme)

Page 34: DNA and Replication · 2018-04-02 · Semi-Conservative Replication •New DNA molecules have one original template strand and one new strand •Follows complementary base pair rules

Replication Direction

• Replication proceeds in the 5’ to 3’ direction

• DNA polymerase can only add free nucleotides to the 3' end of the newly forming strand