8
Detection of enteric pathogens by the nodosome A. Marijke Keestra and Andreas J. Ba ¨ umler Department of Medical Microbiology and Immunology, School of Medicine, University of California at Davis, One Shields Avenue, Davis CA 95616, USA Nucleotide-binding oligomerization domain protein (NOD)1 and NOD2 participate in signaling pathways that detect pathogen-induced processes, such as the pres- ence of peptidoglycan fragments in the host cell cytosol, as danger signals. Recent work suggests that peptido- glycan fragments activate NOD1 indirectly, through ac- tivation of the small Rho GTPase Ras-related C3 botulinum toxin substrate 1 (RAC1). Excessive activation of small Rho GTPases by virulence factors of enteric pathogens also triggers the NOD1 signaling pathway. Many enteric pathogens use virulence factors that alter the activation state of small Rho GTPases, thereby ma- nipulating the host cell cytoskeleton of intestinal epithe- lial cells to promote bacterial attachment or entry. These data suggest that the NOD1 signaling pathway in intes- tinal epithelial cells provides an important sentinel func- tion for detecting ‘breaking and entering’ by enteric pathogens. Distinguishing friend from foe in the gut The human intestine is host to a large microbial commu- nity that provides benefit by conferring niche protection and educating the immune system. An excessive immune response against this beneficial microbial community must be avoided to prevent chronic intestinal inflammation. Mechanisms that restrict immune responses against the resident microbial community include limiting the pres- ence at the luminal surface of innate immune receptors, such as Toll-like receptors (TLRs), which recognize patho- gen-associated molecular patterns (PAMPs), effectively distinguishing microbes from self. For example, expression of TLR5, which recognizes bacterial flagellin, is restricted to the basolateral surface of epithelial cells [1]. In addition, resident macrophages in the mucosal tissue lack expres- sion of the lipopolysaccharide (LPS) detector TLR4 and its co-receptor, CD14, thus making them poor inducers of inflammatory cytokine production [2]. At the same time, however, the intestinal mucosa must maintain the ability to mount adequate antimicrobial responses when enteric pathogens enter the resident mi- crobial community. To distinguish pathogens from com- mensal microbes, the innate immune system detects pathogen-induced processes, such as the presence of mi- crobial products in the cytosol of epithelial cells [3]. These pathogen-induced processes are detected by nucleotide- binding oligomerization domain-like receptors (NLRs); a group of innate immune receptors located in the host cell cytosol [4]. Two of these NLRs, NOD1 and NOD2, are major contributors to responses against bacterial pathogens in the gastrointestinal tract. This article aims to summarize recent advances in our understanding of how NOD pro- teins enable the host to gauge the pathogenic potential of intestinal microbes by detecting the activation state of small Rho GTPases. NOD proteins in pathogen detection and maintenance of gut immune homeostasis NOD1 is expressed constitutively in intestinal epithelial cells [5] where it helps to monitor the integrity of the cytosol and respond to the presence of enteric pathogens [6]. NOD1 contributes to nuclear factor (NF)-kB activation elicited by several enteric bacterial pathogens, including Shigella flexneri [7], enteroinvasive Escherichia coli [5], Campylobacter jejuni [8], Helicobacter pylori [9,10], and Salmonella enterica serotype Typhimurium (S. Typhimur- ium) [11,12]; a process initiating proinflammatory responses. Furthermore, NOD1 along with a second pro- tein involved in monitoring the integrity of epithelial cytosol, NOD2, is critical for the autophagic response to invasive enteric pathogens [13]. Although NOD2 expression was initially thought to be restricted to monocytes [14], it is now clear that this protein is also expressed in Paneth cells of the intestinal epithelium [15]. A loss-of-function mutation in the human NOD2 gene is associated with an increased risk of devel- oping Crohn’s disease [16] and reduced ileal expression of human defensin (HD)-5 and HD-6, two antimicrobial pep- tides produced by Paneth cells [17]. HD-5 has bactericidal activity [18] and HD-6 prevents invasion of enteric patho- gens through the formation of peptide nanonets, which results from an ordered self-assembly of the defensin into fibrils [19]. Paneth cells of mice produce related antimicro- bial peptides, known as cryptins. Interestingly, expression of cryptins is abrogated in NOD2-deficient mice [15]. The opportunistic pathogen Helicobacter hepaticus triggers granulomatous inflammation of the ileum of NOD2-defi- cient mice and inflammatory responses can be reduced by Review 1471-4906/$ see front matter ß 2013 Elsevier Ltd. All rights reserved. http://dx.doi.org/10.1016/j.it.2013.10.009 Corresponding author: Ba ¨ umler, A.J. ([email protected]). Keywords: Nod-like receptors; patterns of pathogenesis; pathogen detection; type III secretions system. Trends in Immunology, March 2014, Vol. 35, No. 3 123

Detection of enteric pathogens by the nodosome

Embed Size (px)

Citation preview

Detection of enteric pathogens by thenodosomeA Marijke Keestra and Andreas J Ba umler

Department of Medical Microbiology and Immunology School of Medicine University of California at Davis One Shields Avenue

Davis CA 95616 USA

Review

Nucleotide-binding oligomerization domain protein(NOD)1 and NOD2 participate in signaling pathways thatdetect pathogen-induced processes such as the pres-ence of peptidoglycan fragments in the host cell cytosolas danger signals Recent work suggests that peptido-glycan fragments activate NOD1 indirectly through ac-tivation of the small Rho GTPase Ras-related C3botulinum toxin substrate 1 (RAC1) Excessive activationof small Rho GTPases by virulence factors of entericpathogens also triggers the NOD1 signaling pathwayMany enteric pathogens use virulence factors that alterthe activation state of small Rho GTPases thereby ma-nipulating the host cell cytoskeleton of intestinal epithe-lial cells to promote bacterial attachment or entry Thesedata suggest that the NOD1 signaling pathway in intes-tinal epithelial cells provides an important sentinel func-tion for detecting lsquobreaking and enteringrsquo by entericpathogens

Distinguishing friend from foe in the gutThe human intestine is host to a large microbial commu-nity that provides benefit by conferring niche protectionand educating the immune system An excessive immuneresponse against this beneficial microbial community mustbe avoided to prevent chronic intestinal inflammationMechanisms that restrict immune responses against theresident microbial community include limiting the pres-ence at the luminal surface of innate immune receptorssuch as Toll-like receptors (TLRs) which recognize patho-gen-associated molecular patterns (PAMPs) effectivelydistinguishing microbes from self For example expressionof TLR5 which recognizes bacterial flagellin is restrictedto the basolateral surface of epithelial cells [1] In additionresident macrophages in the mucosal tissue lack expres-sion of the lipopolysaccharide (LPS) detector TLR4 and itsco-receptor CD14 thus making them poor inducers ofinflammatory cytokine production [2]

At the same time however the intestinal mucosa mustmaintain the ability to mount adequate antimicrobial

1471-4906$ ndash see front matter

2013 Elsevier Ltd All rights reserved httpdxdoiorg101016jit201310009

Corresponding author Baumler AJ (ajbaumlerucdavisedu)Keywords Nod-like receptors patterns of pathogenesis pathogen detection type IIIsecretions system

responses when enteric pathogens enter the resident mi-crobial community To distinguish pathogens from com-mensal microbes the innate immune system detectspathogen-induced processes such as the presence of mi-crobial products in the cytosol of epithelial cells [3] Thesepathogen-induced processes are detected by nucleotide-binding oligomerization domain-like receptors (NLRs) agroup of innate immune receptors located in the host cellcytosol [4] Two of these NLRs NOD1 and NOD2 are majorcontributors to responses against bacterial pathogens inthe gastrointestinal tract This article aims to summarizerecent advances in our understanding of how NOD pro-teins enable the host to gauge the pathogenic potential ofintestinal microbes by detecting the activation state ofsmall Rho GTPases

NOD proteins in pathogen detection and maintenanceof gut immune homeostasisNOD1 is expressed constitutively in intestinal epithelialcells [5] where it helps to monitor the integrity of thecytosol and respond to the presence of enteric pathogens[6] NOD1 contributes to nuclear factor (NF)-kB activationelicited by several enteric bacterial pathogens includingShigella flexneri [7] enteroinvasive Escherichia coli [5]Campylobacter jejuni [8] Helicobacter pylori [910] andSalmonella enterica serotype Typhimurium (S Typhimur-ium) [1112] a process initiating proinflammatoryresponses Furthermore NOD1 along with a second pro-tein involved in monitoring the integrity of epithelialcytosol NOD2 is critical for the autophagic response toinvasive enteric pathogens [13]

Although NOD2 expression was initially thought to berestricted to monocytes [14] it is now clear that thisprotein is also expressed in Paneth cells of the intestinalepithelium [15] A loss-of-function mutation in the humanNOD2 gene is associated with an increased risk of devel-oping Crohnrsquos disease [16] and reduced ileal expression ofhuman defensin (HD)-5 and HD-6 two antimicrobial pep-tides produced by Paneth cells [17] HD-5 has bactericidalactivity [18] and HD-6 prevents invasion of enteric patho-gens through the formation of peptide nanonets whichresults from an ordered self-assembly of the defensin intofibrils [19] Paneth cells of mice produce related antimicro-bial peptides known as cryptins Interestingly expressionof cryptins is abrogated in NOD2-deficient mice [15] Theopportunistic pathogen Helicobacter hepaticus triggersgranulomatous inflammation of the ileum of NOD2-defi-cient mice and inflammatory responses can be reduced by

Trends in Immunology March 2014 Vol 35 No 3 123

Review Trends in Immunology March 2014 Vol 35 No 3

transgenic expression of a-defensin in Paneth cells [20]These data highlight the importance of NOD2 expressionin Paneth cells of the crypt epithelium for maintaininghomeostasis of the ileal mucosa

Collectively these studies highlight the importance ofNOD1 and NOD2 in the detection and control of pathogensat the epithelial surface To understand immune homeo-stasis it is important to be familiar with the signalsactivating this surveillance system and to know the iden-tities of host proteins participating in the NOD1NOD2signaling pathway

Formation of the nodosomeThe NOD1 and NOD2 signaling pathways can be triggeredby the presence of peptidoglycan fragments in the host cellcytosol which might be indicative of bacterial invasion orescape of bacteria from a pathogen-containing vacuoleDiaminopimelic-acid-type peptidoglycan fragments de-rived from Gram-negative bacteria such as g-D-gluta-myl-meso-diaminopimelic acid (iE-DAP) lead to theactivation of the NOD1 signaling pathway [2122] whereasmuramyl dipeptide (MurNAc-L-Ala-D-isoGln) ndash a peptido-glycan motif common to all bacteria ndash activates the NOD2signaling pathway [2324]

Upon stimulation with peptidoglycan NOD1 or NOD2form a protein complex termed the nodosome which con-tains receptor-interacting protein (RIP)2 [2526] Recruit-ment of RIP2 to the nodosome leads to activation of NF-kBand mitogen-activated protein (MAP) kinases [72728]thereby inducing proinflammatory and antimicrobialresponses [51529] Furthermore NOD1 and NOD2 inter-act with BID BH3 interacting-domain death agonist aBCL2 family protein thereby providing a link betweeninflammation and programmed cells death [30] Severalstudies have suggested that recruitment of NOD1 andNOD2 to the cell membrane is required for the formationof a functional nodosome For example NOD1 is recruited tothe membrane at the site of bacterial entry during S flexneriinfection where it colocalizes with NF-kB essential modula-tor (NEMO) a key component of the NF-kB signaling com-plex [31] Similarly recruitment of NOD2 to the membraneis required for responding to stimulation of intestinal epi-thelial cells with muramyl dipeptide [32] NOD2 promotesthe membrane recruitment of RIP2 [33] leading to ubiqui-tinylation of RIP2 and NEMO [3435] The nodosome con-tains the co-chaperone-like ubiquitin-ligase-associatedprotein SGT1 suppressor of G2 allele of SKP1 which isrequired for NF-kB activation [3637] presumably becauseit activates signaling components by assisting in the ubiqui-tinylation of NOD1 RIP2 andor NEMO Additional reg-ulators acting downstream of NOD2 in the signaling cascadehave been identified in genome-wide small interfering RNA(siRNA) screens [3839] However the functional mecha-nism leading to a membrane association of NOD1 and NOD2has long remained elusive

Recently a siRNA screen identified FRMPD2 FERMand PDZ domain containing 2 as a membrane-scaffoldingcomplex that supports a basolateral localization of NOD2in epithelial cells [38] Furthermore small Rho GTPaseswere identified as components of the NOD1 nodosomewhich provides a plausible explanation for its assembly

124

at the membrane [40] Small Rho GTPases are a family ofmembrane-bound signaling proteins that transition be-tween an inactive GDP-bound form and an active GTP-bound form The transition from an inactive to an activeform is catalyzed by guanosine nucleotide-exchange factors(GEFs) whereas GTPase-activating proteins (GAPs) accel-erate GTP hydrolysis thereby facilitating transition froman active to an inactive form of small Rho GTPases [41]The small Rho GTPases studied most extensively includeRAC1 cell division control protein 42 homolog (CDC42)and Ras homolog gene family member A (RHOA) Activeforms of the small Rho GTPases RAC1 CDC42 and RHOAcan activate NF-kB [42] Recent evidence suggests thatNF-kB activation mediated by small Rho GTPases requiresfunctional NOD1 RIP1 and RIP2 proteins [4043]

NOD2 colocalizes with the activated form of RAC1 inmembrane ruffles indicating that this Rho GTPase mightbe present in nodosomes [44] Furthermore NOD2 coloca-lizes with GEF-H1 a GEF for RHOA [45] Evidence for aninteraction of NOD1 with the activated forms of RAC1 andCDC42 comes from the observation that these proteins canbe coimmunoprecipitated [40] Similarly the small RhoGTPase RAC2 colocalizes with RIP2 in membrane rufflesand both proteins are present in a protein complex [43] Inplants the heat shock protein (HSP)90 chaperone bindsRAC1 in innate immune protein complexes [46] and thisinteraction is thought to function in the recruitment ofinnate immune receptors to the membrane-bound smallRho GTPase [47] Interestingly the nodosome of mammalscontains HSP90 [48] the presence of which is required forNF-kB activation mediated by NOD1 [40] and NOD2 [37]These observations raise the possibility that similar to itsfunction in plants HSP90 of mammals associates withNOD1 and NOD2 and functions in recruiting the resultingprotein complexes to the activated forms of membrane-bound small Rho GTPases [48] The membrane localizationof small Rho GTPases is essential for their ability toactivate the nodosome because a constitutively active formof RAC1 lacking its prenyl-group is unable to activateNOD1 [40] Thus the picture emerging from these studiesis that excessive activation of the membrane-bound pro-teins RAC1 CDC42 or RHOA leads to assembly of thenodosome at the plasma membrane a process that ulti-mately results in NF-kB activation The finding that acti-vation of RAC1 CDC42 and RHOA triggers the NOD1signaling pathway has important ramifications becausesmall Rho GTPases are well-known targets of bacterialvirulence factors [49] (Box 1)

Detection of bacterial virulence factors by thenodosomeVirulence factors activating small Rho GTPases are partic-ularly common among enteric pathogens (Figure 1) Forexample many type III secretion systems (T3SSs) of entericpathogens inject proteins termed effectors into host cellsthat activate small Rho GTPases The T3SS effectors IpgB1from S flexneri EspT from Citrobacter rodentium and SopEfrom S Typhimurium serve as GEFs that activate RAC1and CDC42 [50ndash52] The T3SS effectors Map from entero-pathogenic E coli and SopE2 from S Typhimurium serve asGEFs that activate CDC42 [5053] Furthermore EspM2

Box 1 Small Rho GTPases are common targets for bacterial

virulence factors

Over the past two decades manipulation of small Rho GTPases has

emerged as a conserved pattern in bacterial pathogenesis (reviewed

in [49]) For example the T3SS encoded by Salmonella pathogeni-

city island 1 triggers actin rearrangements and NF-kB activation in

host cells [6970] by injecting effector proteins into the cytosol that

activate Rac1 and CDC42 [52] In addition to the many effector

proteins and toxins from a variety of enteric pathogens which

activate small Rho GTPases (see Figure 1 in main text) there are

multiple examples of virulence factors that inactivate these

molecular switches For instance Clostridium difficile toxin A and

B glycosylate Rho GTPases thereby inhibiting their function

[101102] The T3SS effector proteins ExoS of Pseudomonas

aeruginosa YopE of Yersinia pseudotuberculosis and SptP of S

Typhimurium inhibit the function of small Rho GTPases by acting as

GAPs [103ndash106]

Small Rho GTPases mediate actin polymerization and NF-kB

activation through two distinct pathways [107] A model for the

pathway leading to NF-kB activation is shown in Figure 1 main text

Interestingly some virulence factors of enteric pathogens target

components of the signaling pathway that are located downstream

of small Rho GTPases For example the S Typhimurium T3SS

effector protein SspH2 Salmonella secreted protein H2 cooperates

with the NLR co-chaperone SGT1 to ubiquitinate NOD1 thereby

inducing IL-8 secretion [108] (see Figure 1 in main text) In case of

enteropathogenic Escherichia coli the T3SS effector proteins NleD

non-LEE-encoded effector D and NleC function in silencing this

signaling pathway by cleaving C-Jun N-terminal kinase (JNK) and

the NF-kB p65 subunit respectively [109110]

Review Trends in Immunology March 2014 Vol 35 No 3

from enterohemorrhagic E coli and EspM2 from C roden-tium serve as GEFs for RHOA [54] The T3SS effectorsIpgB2 and OspB from S flexneri activate GEF-H1 whichin turn activates RHOA [5055] The S Typhimurium inosi-tol phosphatase SopB alters the inositol phosphate (IP)metabolism of the host cell thereby indirectly activatingCDC42 [5657] Recent studies have suggested that VAV2can activate CDC42 after it senses changes in the IP metab-olism [58] which suggest a possible mechanism for SopB-mediated CDC42 activation Cytotoxic necrotizing factor(CNF)1 ndash a toxin produced by uropathogenic E coli strainsndash constitutively activates RAC1 by inactivating its GTPaseactivity through deamidation of a glutamine residue [59ndash61] Finally Cam jejuni secretes Cia proteins through itsflagellar apparatus [62ndash65] and these proteins are ulti-mately translocated into the cytosol of host cells [66] wherethey contribute to activation of RAC1 [67] A second path-way by which Cam jejuni elicits RAC1 activation is CadF-mediated binding of fibronectin to the bacterial surfacewhich induces a b1-integrin-dependent signaling pathwayleading to the activation of two GEFs termed dedicator ofcytokinesis (DOCK)180 and T cell lymphoma invasion andmetastasis (TIAM)-1 [68] (Figure 1)

It is well established that activation of small RhoGTPases by bacterial virulence factors leads to inductionof MAP kinase signaling and nuclear translocation of NF-kB [526169ndash74] but evidence that the NOD1RIP2RIP1signaling pathway might be involved in this process hasemerged only recently The first indication that bacterialvirulence factors might activate the nodosome was theobservation that engagement of GEF-H1 by the S flexneriT3SS effectors IpgB2 and OspB led to NF-kB activationthat was NOD1 dependent [55] The S Typhimurium T3SSeffector SipA was subsequently shown to induce NF-kB

activation through a NOD1NOD2-dependent signalingpathway [12] Work with the E coli CNF-1 toxin estab-lished a clear role for RAC2 in inducing RIP1RIP2-depen-dent NF-kB activation [43] Finally activation of RAC1 bythe S Typhimurium T3SS effector SopE was shown to leadto assembly of the NOD1 nodosome at the host cell mem-brane thereby inducing NF-kB activation [40] The gua-nosine nucleotide-exchange factor activity of SopE isrequired for NF-kB activation [75] and for the recruitmentof NOD1 to membrane ruffles [40] The observation thatSopE can activate inflammasome-dependent cytokine mat-uration [7677] might be a consequence of nodosome acti-vation because NOD1 is known to enhance interleukin(IL)-1b secretion [78] IL-1b secretion requires two signalsThe first signal stimulates TLRs or NOD proteins therebydriving NF-kB-dependent expression of the IL1B genewhich leads to the production of pro-IL-1b The secondsignal stimulates NLRs to activate caspase-1 which inturn cleaves pro-IL-1b into its active form NOD1-depen-dent IL-1b secretion [78] is likely an indirect consequenceof NF-kB activation (signal 1) rather than resulting from adirect activation of caspase-1 (signal 2)

Not all effector proteins that activate small Rho GTPasesdo necessarily activate NF-kB For example SopE andSopE2 are both GEFs for RAC1 [53] However althoughan S Typhimurium strain translocating only SopE inducesproinflammatory responses in host cells [40] a strain trans-locating only SopE2 does not [73] Thus the signal detectedby NOD1 might be an excessive or prolonged activation ofsmall Rho GTPases which is observed for instance withconstitutively active forms of RAC1 CDC42 and RHOA[42] This model suggests that proinflammatory responsesare not observed when Rho GTPases are activated duringprocess involved in normal cell physiology

Collectively these data suggest that excessive activa-tion of small Rho GTPases by bacterial virulence factors orby the presence of peptidoglycan fragments in the cytosolare pathogen-induced processes that activate the NOD1signaling pathway Although the detection of peptidogly-can fragments in the host cell cytosol evidently representsan innate immune surveillance mechanism the situationis less clear-cut in case of bacterial virulence factors Onebenefit to the pathogen of activating small Rho GTPases isthat this process leads to cytoskeletal rearrangements(reviewed in [79]) promoting bacterial entry into host cells(reviewed in [80]) or the formation of pedestals on epithe-lial surfaces (reviewed in [81]) A byproduct of deployingvirulence factors to induce these actin rearrangementswould in turn be the induction of proinflammatoryresponses that are aimed at killing microbes [82] whichcould be viewed as the cost of doing business By this logicmonitoring the activation state of Rho GTPases could beconsidered a NOD1-dependent immune surveillance mech-anism that sets off an alarm when it detects breaking andentering by enteric pathogens This is reminiscent of effec-tor-triggered immune responses in plants which detectbacterial virulence factors either directly or through theireffects on host targets (reviewed in [8384])

An alternative but not mutually exclusive interpreta-tion of the data would be that enteric pathogens deployvirulence factors that activate the NOD1 pathway because

125

Intesnal lumenCadF

Fn

Integrinβ1

IpgB2

OspB

GEF-H1

EspM2 SopB Map IpgB1 Pepdo-glycan

RHOA

GDP

PI3-kinase

CDC42

SopE2 EspT

SopERAC1

FAK

DOCK180

TIAM-1

RHOA CDC42 RAC1

HSP90NOD1

RIP1RIP2

NEMOSGT1

SspH2

Ikk

IκB NF-κB

JNK ERK12

NF-κB AP-1

Epithelialcell Nucleus

Proinflammatorygene expression

GDP

GTP GTPCNF1

GTP

GDP GDP GDP

Nodosome

PIP

VAV2

GTP GTP GTP

GDP GDPGDP

TRENDS in Immunology

Figure 1 Model for activation of the Nucleotide-binding oligomerization domain protein (NOD)1 nodosome in epithelial cells by diaminopimelic acid-type peptidoglycan or

bacterial virulence factors which requires excessive or prolonged activation of small Rho GTPases Peptidoglycan (blue box) or bacterial virulence factors (blue circles)

engage host proteins (red circles) to activate (arrows) the nodosome thereby inducing the expression of proinflammatory genes AP-1 activator protein-1 CDC42 cell

division control protein 42 homolog CNF1 cytotoxic necrotizing factor 1 DOCK dedicator of cytokinesis ERK extracellular signal-regulated kinase FAK focal adhesion

kinase Fn fibronectin GEF guanosine nucleotide-exchange factor HSP90 heat shock protein 90 IkB nuclear factor of kappa light polypeptide gene enhancer in B cells

inhibitor Ikk I kB kinase JNK C-Jun N-terminal kinase NEMO NF-kB essential modulator NF-kB nuclear factor-kB PI3 phosphoinositide 3 PIP phosphatidylinositol

phosphate RAC1 Ras-related C3 botulinum toxin substrate 1 RHOA Ras homolog gene family member A RIP receptor-interacting protein SGT1 suppressor of G-two

allele of Skp1 SspH2 Salmonella secreted protein H2 TIAM-1 T cell lymphoma invasion and metastasis-1

Review Trends in Immunology March 2014 Vol 35 No 3

126

Review Trends in Immunology March 2014 Vol 35 No 3

they benefit from the ensuing inflammatory host responseThis viewpoint is supported by recent data suggesting thatintestinal inflammation confers a fitness advantage uponS Typhimurium E coli and C rodentium during theircompetition with the obligate anaerobic microbial commu-nity that dominates the healthy gut [85ndash87] A bloom of STyphimurium and E coli in the inflamed gut is supportedby host-derived electron acceptors which are generated asbyproducts of the inflammatory host response [87ndash89]Interestingly the SopE protein which is present in onlya subset of S Typhimurium isolates alters host responsesby increasing expression of inducible NO synthase (iNOS)an enzyme that produces NO Conversion of NO to nitrateincreases growth of SopE-producing S Typhimuriumstrains in the intestinal lumen through nitrate respiration[88] Enhanced growth of S Typhimurium in the intestinallumen increases transmission of the pathogen [90] whichrepresents a potent selective force for the evolution ofenteric pathogens In other words the reason for deployingvirulence factors that trigger the NOD1 signaling pathwaymight be that the ensuing host response selectively feedsthe respective enteric pathogens

In summary manipulation of small Rho GTPases bybacterial virulence factors is a common theme in microbialpathogenesis (Box 1) and detection of these pathogen-induced processes by the innate immune system enablesthe host to distinguish pathogens from microbes with lowerpathogenic potential From an evolutionary point of view itis also interesting to note that detection of bacterial effec-tor proteins is a feature of the innate immune system thatis conserved from plants to mammals This observationraises the question whether signaling pathways involvedin detecting these patterns of pathogenesis are also con-served between the different phyla

Evolution of the NOD1 signaling pathwayNOD1 and NOD2 of mammals are thought to have evolvedindependently from plant NLRs suggesting that function-al similarities and the presence of similar protein domains(ie the presence of similar C-terminal leucine-richrepeats and similar central nucleotide-binding oligomeri-zation motifs) are features that developed independently indifferent lineages Furthermore the Drosophila melano-gaster genome does not encode homologs of the mammalianNOD1 or NOD2 proteins (reviewed in [9192]) Insteaddiaminopimelic acid-type peptidoglycan from Gram-nega-tive bacteria is detected in D melanogaster through theimmune deficiency (IMD) pathway which shares homologyto the tumor necrosis factor (TNF)-a signaling pathway inmammals [93] In the IMD pathway peptidoglycan isdetected by the transmembrane receptor peptidoglycan-recognition protein (PGRP)-LC [94] or the cytoplasmicreceptor PGRP-LE [95] Upon binding of peptidoglycanPGRP-LC and PGRP-LE activate IMD a death domainprotein with homology to RIP1 the RIP kinase associatedwith TNF-a-dependent NF-kB activation [96] In turnIMD activates the transcription factor Relish which is amember of the NF-kB family [97]

Interestingly recent studies raise the possibility thatthe IMD and NOD1 signaling pathways represent evolu-tionary conserved signaling cascades for the detection of

diaminopimelic acid-type peptidoglycan (reviewed in [98])First the E coli CNF-1 toxin constitutively activatesRAC2 in Drosophila cells thereby inducing the IMD path-way [43] and diaminopimelic acid-type peptidoglycan acti-vates the NOD1-signalling pathway in human cellsthrough a RAC1-dependent mechanism [40] Thus a re-quirement for small Rho GTPases is a feature sharedbetween the IMD and NOD1 pathways but absent fromthe TNF-a signaling pathway Second human RAC2induces NF-kB activation through RIP1 and RIP2 [43]These data suggest that the IMD homolog RIP1 is not onlyinvolved in TNF-a signaling but also participates indetecting the activation state of small Rho GTPases whichconfirms the similarities between the IMD and NOD1signaling pathways There are however some notable dif-ferences between the IMD and NOD1 pathways includingthe absence of a NOD1 homolog in insects and the fact thatmammalian PGRPs do not function in the NOD1 signalingpathway [99]

In summary recent evidence provides some support forthe idea that the signaling pathways detecting diamino-pimelic acid-type peptidoglycan in mammals and insectsshare a common ancestry (reviewed in [98]) This observa-tion along with the finding that the Drosophila Toll proteinand the homologous mammalian TLRs both function ascellular sensors of microbes highlights the conservation ofinnate immune surveillance mechanism within the animalkingdom

Concluding remarksThe picture emerging from these studies is that NODproteins provide epithelial cells with important sentinelfunctions for detecting pathogen-induced violations of theintegrity of the host cell cytoplasm Many enteric patho-gens produce virulence factors that manipulate the activityof small Rho GTPases to mediate attachment or entry or toinhibit phagocytosis (Figure 1 and Box 1) As a result thehost can detect the presence of pathogens by monitoringthe activation state of small Rho GTPases The down-stream signaling pathways enable the intestinal epitheli-um to mount responses that are appropriate to the threatincluding NF-kB activation activation of the autophagypathway and the release of antimicrobial peptides Theability of the epithelium to react appropriately is impor-tant for balancing host responses against microbial com-munities in the gastrointestinal tract When thesemechanisms for maintaining immune homeostasis aredisrupted by mutations that impair NOD2 signaling orthe autophagy pathway the host has an increasing risk ofdeveloping intestinal inflammation

Direct evidence for the binding of NOD1 to peptidogly-can is lacking therefore it has been speculated that thisprotein might function in signal transduction rather thanserving as an innate immune receptor for peptidoglycan[100] Interestingly NOD1-dependent NF-kB activationelicited by diaminopimelic acid-type peptidoglycanrequires the presence of active RAC1 [40] thereby raisingthe possibility that peptidoglycan is sensed in mammalsby an innate immune receptor acting upstream of thissmall Rho GTPase (Figure 1) which represents an excitingarea for future research

127

Review Trends in Immunology March 2014 Vol 35 No 3

AcknowledgmentsWork in AJBrsquos laboratory is supported by Public Health Service GrantsAI044170 and AI076246 AMK is supported by the American HeartAssociation Grant 12SDG12220022

Appendix A Supplementary dataSupplementary data associated with this article can befound in the online version at httpdxdoiorg101016jit201310009

References1 Gewirtz AT et al (2001) Cutting edge bacterial flagellin activates

basolaterally expressed TLR5 to induce epithelial proinflammatorygene expression J Immunol 167 1882ndash1885

2 Weber B et al (2009) Intestinal macrophages differentiation andinvolvement in intestinal immunopathologies Semin Immunopathol31 171ndash184

3 Vance RE et al (2009) Patterns of pathogenesis discrimination ofpathogenic and nonpathogenic microbes by the innate immunesystem Cell Host Microbe 6 10ndash21

4 Biswas A and Kobayashi KS (2013) Regulation of intestinalmicrobiota by the NLR protein family Int Immunol 25 207ndash214

5 Kim JG et al (2004) Nod1 is an essential signal transducer inintestinal epithelial cells infected with bacteria that avoidrecognition by toll-like receptors Infect Immun 72 1487ndash1495

6 Chamaillard M et al (2004) Battling enteroinvasive bacteria Nod1comes to the rescue Trends Microbiol 12 529ndash532

7 Girardin SE et al (2001) CARD4Nod1 mediates NF-kappaB andJNK activation by invasive Shigella flexneri EMBO Rep 2 736ndash742

8 Zilbauer M et al (2007) A major role for intestinal epithelialnucleotide oligomerization domain 1 (NOD1) in eliciting hostbactericidal immune responses to Campylobacter jejuni CellMicrobiol 9 2404ndash2416

9 Viala J et al (2004) Nod1 responds to peptidoglycan delivered by theHelicobacter pylori cag pathogenicity island Nat Immunol 5 1166ndash1174

10 Allison CC et al (2009) Helicobacter pylori induces MAPKphosphorylation and AP-1 activation via a NOD1-dependentmechanism J Immunol 183 8099ndash8109

11 Geddes K et al (2010) Nod1 and Nod2 regulation of inflammation inthe Salmonella colitis model Infect Immun 78 5107ndash5115

12 Keestra AM et al (2011) A Salmonella virulence factor activates theNOD1NOD2 signaling pathway MBio 2 e00266ndash11

13 Travassos LH et al (2010) Nod1 and Nod2 direct autophagy byrecruiting ATG16L1 to the plasma membrane at the site of bacterialentry Nat Immunol 11 55ndash62

14 Ogura Y et al (2001) Nod2 a Nod1Apaf-1 family member that isrestricted to monocytes and activates NF-kappaB J Biol Chem 2764812ndash4818

15 Kobayashi KS et al (2005) Nod2-dependent regulation of innate andadaptive immunity in the intestinal tract Science 307 731ndash734

16 Hampe J et al (2001) Association between insertion mutation inNOD2 gene and Crohnrsquos disease in German and British populationsLancet 357 1925ndash1928

17 Wehkamp J et al (2004) NOD2 (CARD15) mutations in Crohnrsquosdisease are associated with diminished mucosal alpha-defensinexpression Gut 53 1658ndash1664

18 Salzman NH et al (2003) Protection against enteric salmonellosis intransgenic mice expressing a human intestinal defensin Nature 422522ndash526

19 Chu H et al (2012) Human alpha-defensin 6 promotes mucosalinnate immunity through self-assembled peptide nanonets Science337 477ndash481

20 Biswas A et al (2010) Induction and rescue of Nod2-dependent Th1-driven granulomatous inflammation of the ileum Proc Natl AcadSci USA 107 14739ndash14744

21 Girardin SE et al (2003) Nod1 detects a unique muropeptide fromgram-negative bacterial peptidoglycan Science 300 1584ndash1587

22 Chamaillard M et al (2003) An essential role for NOD1 in hostrecognition of bacterial peptidoglycan containing diaminopimelicacid Nat Immunol 4 702ndash707

128

23 Inohara N et al (2003) Host recognition of bacterial muramyldipeptide mediated through NOD2 Implications for Crohnrsquosdisease J Biol Chem 278 5509ndash5512

24 Girardin SE et al (2003) Nod2 is a general sensor of peptidoglycanthrough muramyl dipeptide (MDP) detection J Biol Chem 2788869ndash8872

25 Tattoli I et al (2007) The nodosome Nod1 and Nod2 controlbacterial infections and inflammation Semin Immunopathol 29289ndash301

26 Rosenstiel P et al (2006) A short isoform of NOD2CARD15 NOD2-S is an endogenous inhibitor of NOD2receptor-interacting proteinkinase 2-induced signaling pathways Proc Natl Acad Sci USA103 3280ndash3285

27 Inohara N et al (1999) Nod1 an Apaf-1-like activator of caspase-9and nuclear factor-kappaB J Biol Chem 274 14560ndash14567

28 Park JH et al (2007) RICKRIP2 mediates innate immuneresponses induced through Nod1 and Nod2 but not TLRs JImmunol 178 2380ndash2386

29 Grubman A et al (2010) The innate immune molecule NOD1regulates direct killing of Helicobacter pylori by antimicrobialpeptides Cell Microbiol 12 626ndash639

30 Yeretssian G et al (2011) Non-apoptotic role of BID in inflammationand innate immunity Nature 474 96ndash99

31 Kufer TA et al (2008) The pattern-recognition molecule Nod1 islocalized at the plasma membrane at sites of bacterial interactionCell Microbiol 10 477ndash486

32 Barnich N et al (2005) Membrane recruitment of NOD2 in intestinalepithelial cells is essential for nuclear factor-kappaB activation inmuramyl dipeptide recognition J Cell Biol 170 21ndash26

33 Lecine P et al (2007) The NOD2-RICK complex signals from theplasma membrane J Biol Chem 282 15197ndash15207

34 Abbott DW et al (2004) The Crohnrsquos disease protein NOD2requires RIP2 in order to induce ubiquitinylation of a novel site onNEMO Curr Biol 14 2217ndash2227

35 Hasegawa M et al (2008) A critical role of RICKRIP2polyubiquitination in Nod-induced NF-kappaB activation EMBO J27 373ndash383

36 da Silva Correia J et al (2007) SGT1 is essential for Nod1 activationProc Natl Acad Sci USA 104 6764ndash6769

37 Mayor A et al (2007) A crucial function of SGT1 and HSP90 ininflammasome activity links mammalian and plant innate immuneresponses Nat Immunol 8 497ndash503

38 Lipinski S et al (2012) RNAi screening identifies mediators of NOD2signaling implications for spatial specificity of MDP recognitionProc Natl Acad Sci USA 109 21426ndash21431

39 Warner N et al (2013) A genome-wide siRNA screen reveals positiveand negative regulators of the NOD2 and NF-kappaB signalingpathways Sci Signal 6 rs3

40 Keestra AM et al (2013) Manipulation of small Rho GTPases is apathogen-induced process detected by NOD1 Nature 496 233ndash237

41 Narumiya S (1996) The small GTPase Rho cellular functions andsignal transduction J Biochem 120 215ndash228

42 Perona R et al (1997) Activation of the nuclear factor-kappaB byRho CDC42 and Rac-1 proteins Genes Dev 11 463ndash475

43 Boyer L et al (2011) Pathogen-derived effectors trigger protectiveimmunity via activation of the Rac2 enzyme and the IMD or Ripkinase signaling pathway Immunity 35 536ndash549

44 Legrand-Poels S et al (2007) Modulation of Nod2-dependentNF-kappaB signaling by the actin cytoskeleton J Cell Sci 1201299ndash1310

45 Zhao Y et al (2012) Control of NOD2 and Rip2-dependent innateimmune activation by GEF-H1 Inflamm Bowel Dis 18 603ndash612

46 Thao NP et al (2007) RAR1 and HSP90 form a complex with RacRop GTPase and function in innate-immune responses in rice PlantCell 19 4035ndash4045

47 Chen L et al (2010) The HopSti1-Hsp90 chaperone complexfacilitates the maturation and transport of a PAMP receptor in riceinnate immunity Cell Host Microbe 7 185ndash196

48 Hahn JS (2005) Regulation of Nod1 by Hsp90 chaperone complexFEBS Lett 579 4513ndash4519

49 Aktories K et al (2000) Rho GTPases as targets of bacterial proteintoxins Biol Chem 381 421ndash426

Review Trends in Immunology March 2014 Vol 35 No 3

50 Huang Z et al (2009) Structural insights into host GTPase isoformselection by a family of bacterial GEF mimics Nat Struct Mol Biol16 853ndash860

51 Bulgin RR et al (2009) EspT triggers formation of lamellipodia andmembrane ruffles through activation of Rac-1 and Cdc42 CellMicrobiol 11 217ndash229

52 Hardt WD et al (1998) S typhimurium encodes an activator of RhoGTPases that induces membrane ruffling and nuclear responses inhost cells Cell 93 815ndash826

53 Friebel A et al (2001) SopE and SopE2 from Salmonellatyphimurium activate different sets of RhoGTPases of the host cellJ Biol Chem 276 34035ndash34040

54 Arbeloa A et al (2010) EspM2 is a RhoA guanine nucleotide exchangefactor Cell Microbiol 12 654ndash664

55 Fukazawa A et al (2008) GEF-H1 mediated control of NOD1dependent NF-kappaB activation by Shigella effectors PLoSPathog 4 e1000228

56 Norris FA et al (1998) SopB a protein required for virulence ofSalmonella dublin is an inositol phosphate phosphatase Proc NatlAcad Sci USA 95 14057ndash14059

57 Zhou D et al (2001) A Salmonella inositol polyphosphatase acts inconjunction with other bacterial effectors to promote host cell actincytoskeleton rearrangements and bacterial internalization MolMicrobiol 39 248ndash259

58 Krause-Gruszczynska M et al (2011) The signaling pathway ofCampylobacter jejuni-induced Cdc42 activation role of fibronectinintegrin beta1 tyrosine kinases and guanine exchange factor Vav2Cell Commun Signal 9 32

59 Schmidt G et al (1997) Gln 63 of Rho is deamidated by Escherichiacoli cytotoxic necrotizing factor-1 Nature 387 725ndash729

60 Flatau G et al (1997) Toxin-induced activation of the G protein p21Rho by deamidation of glutamine Nature 387 729ndash733

61 Lerm M et al (1999) Deamidation of Cdc42 and Rac by Escherichiacoli cytotoxic necrotizing factor 1 activation of c-Jun N-terminalkinase in HeLa cells Infect Immun 67 496ndash503

62 Konkel ME et al (1999) Identification of proteins required for theinternalization of Campylobacter jejuni into cultured mammaliancells Adv Exp Med Biol 473 215ndash224

63 Rivera-Amill V and Konkel ME (1999) Secretion of Campylobacterjejuni Cia proteins is contact dependent Adv Exp Med Biol 473225ndash229

64 Malik-Kale P et al (2008) Culture of Campylobacter jejuni withsodium deoxycholate induces virulence gene expression JBacteriol 190 2286ndash2297

65 Konkel ME et al (2004) Secretion of virulence proteins fromCampylobacter jejuni is dependent on a functional flagellar exportapparatus J Bacteriol 186 3296ndash3303

66 Neal-McKinney JM and Konkel ME (2012) The Campylobacterjejuni CiaC virulence protein is secreted from the flagellum anddelivered to the cytosol of host cells Front Cell Infect Microbiol2 31

67 Eucker TP and Konkel ME (2012) The cooperative action ofbacterial fibronectin-binding proteins and secreted proteinspromote maximal Campylobacter jejuni invasion of host cells bystimulating membrane ruffling Cell Microbiol 14 226ndash238

68 Boehm M et al (2011) Major host factors involved in epithelial cellinvasion of Campylobacter jejuni role of fibronectin integrin beta1FAK Tiam-1 and DOCK180 in activating Rho GTPase Rac1 FrontCell Infect Microbiol 1 17

69 Chen LM et al (1996) Requirement of CDC42 for Salmonella-induced cytoskeletal and nuclear responses Science 274 2115ndash2118

70 Hobbie S et al (1997) Involvement of mitogen-activated proteinkinase pathways in the nuclear responses and cytokine productioninduced by Salmonella typhimurium in cultured intestinal epithelialcells J Immunol 159 5550ndash5559

71 Savkovic SD et al (1997) Activation of NF-kappaB in intestinalepithelial cells by enteropathogenic Escherichia coli Am J Physiol273 C1160ndashC1167

72 Zurawski DV et al (2008) The NleEOspZ family of effector proteinsis required for polymorphonuclear transepithelial migration acharacteristic shared by enteropathogenic Escherichia coli andShigella flexneri infections Infect Immun 76 369ndash379

73 Figueiredo JF et al (2009) Salmonella enterica Typhimurium SipAinduces CXC-chemokine expression through p38MAPK and JUNpathways Microbes Infect 11 302ndash310

74 Raymond B et al (2011) The WxxxE effector EspT triggersexpression of immune mediators in an ErkJNK and NF-kappaB-dependent manner Cell Microbiol 13 1881ndash1893

75 Schlumberger MC et al (2003) Amino acids of the bacterial toxinSopE involved in G nucleotide exchange on Cdc42 J Biol Chem 27827149ndash27159

76 Hoffmann C et al (2010) In macrophages caspase-1 activation bySopE and the type III secretion system-1 of S typhimurium canproceed in the absence of flagellin PLoS ONE 5 e12477

77 Muller AJ et al (2009) The S Typhimurium effector SopE inducescaspase-1 activation in stromal cells to initiate gut inflammation CellHost Microbe 6 125ndash136

78 Yoo NJ et al (2002) Nod1 a CARD protein enhances pro-interleukin-1beta processing through the interaction with pro-caspase-1 Biochem Biophys Res Commun 299 652ndash658

79 Haglund CM and Welch MD (2011) Pathogens and polymersmicrobe-host interactions illuminate the cytoskeleton J Cell Biol195 7ndash17

80 Patel JC and Galan JE (2005) Manipulation of the host actincytoskeleton by Salmonella ndash all in the name of entry Curr OpinMicrobiol 8 10ndash15

81 Celli J et al (2000) Enteropathogenic Escherichia coli (EPEC)attachment to epithelial cells exploiting the host cell cytoskeletonfrom the outside Cell Microbiol 2 1ndash9

82 Boquet P and Lemichez E (2003) Bacterial virulence factorstargeting Rho GTPases parasitism or symbiosis Trends Cell Biol13 238ndash246

83 Jones JD and Dangl JL (2006) The plant immune system Nature444 323ndash329

84 Stuart LM et al (2013) Effector-triggered versus pattern-triggeredimmunity how animals sense pathogens Nat Rev Immunol 13199ndash206

85 Stecher B et al (2007) Salmonella enterica serovar typhimuriumexploits inflammation to compete with the intestinal microbiotaPLoS Biol 5 2177ndash2189

86 Lupp C et al (2007) Host-mediated inflammation disrupts theintestinal microbiota and promotes the overgrowth ofEnterobacteriaceae Cell Host Microbe 2 119ndash129

87 Winter SE et al (2013) Host-derived nitrate boosts growth of E coliin the inflamed gut Science 339 708ndash711

88 Lopez CA et al (2012) Phage-mediated acquisition of a type IIIsecreted effector protein boosts growth of salmonella by nitraterespiration MBio 3 e00143-12

89 Winter SE et al (2010) Gut inflammation provides a respiratoryelectron acceptor for Salmonella Nature 467 426ndash429

90 Lawley TD et al (2008) Host transmission of Salmonella entericaserovar Typhimurium is controlled by virulence factors andindigenous intestinal microbiota Infect Immun 76 403ndash416

91 Bonardi V et al (2012) A new eye on NLR proteins focused on clarityor diffused by complexity Curr Opin Immunol 24 41ndash50

92 Staskawicz BJ et al (2001) Common and contrasting themes ofplant and animal diseases Science 292 2285ndash2289

93 Pinheiro VB and Ellar DJ (2006) How to kill a mocking bug CellMicrobiol 8 545ndash557

94 Choe KM et al (2002) Requirement for a peptidoglycan recognitionprotein (PGRP) in Relish activation and antibacterial immuneresponses in Drosophila Science 296 359ndash362

95 Takehana A et al (2002) Overexpression of a pattern-recognitionreceptor peptidoglycan-recognition protein-LE activates imdrelish-mediated antibacterial defense and the prophenoloxidase cascade inDrosophila larvae Proc Natl Acad Sci USA 99 13705ndash13710

96 Georgel P et al (2001) Drosophila immune deficiency (IMD) is adeath domain protein that activates antibacterial defense and canpromote apoptosis Dev Cell 1 503ndash514

97 Dushay MS et al (1996) Origins of immunity relish a compoundRel-like gene in the antibacterial defense of Drosophila Proc NatlAcad Sci USA 93 10343ndash10347

98 Stuart LM and Boyer L (2013) RhoGTPases ndash NODes for effector-triggered immunity in animals Cell Res 23 980ndash981

129

Review Trends in Immunology March 2014 Vol 35 No 3

99 Dziarski R and Gupta D (2010) Review mammalian peptidoglycanrecognition proteins (PGRPs) in innate immunity Innate Immun 16168ndash174

100 Murray PJ (2005) NOD proteins an intracellular pathogen-recognition system or signal transduction modifiers Curr OpinImmunol 17 352ndash358

101 Just I et al (1995) Glucosylation of Rho proteins by Clostridiumdifficile toxin B Nature 375 500ndash503

102 Ohguchi K et al (1996) Effects of Clostridium difficile toxin A andtoxin B on phospholipase D activation in human promyelocyticleukemic HL60 cells Infect Immun 64 4433ndash4437

103 Goehring UM et al (1999) The N-terminal domain of Pseudomonasaeruginosa exoenzyme S is a GTPase-activating protein for RhoGTPases J Biol Chem 274 36369ndash36372

104 Black DS and Bliska JB (2000) The RhoGAP activity of theYersinia pseudotuberculosis cytotoxin YopE is required forantiphagocytic function and virulence Mol Microbiol 37 515ndash527

130

105 Von Pawel-Rammingen U et al (2000) GAP activity of the YersiniaYopE cytotoxin specifically targets the Rho pathway a mechanism fordisruption of actin microfilament structure Mol Microbiol 36 737ndash748

106 Fu Y and Galan JE (1999) A salmonella protein antagonizes Rac-1and Cdc42 to mediate host-cell recovery after bacterial invasionNature 401 293ndash297

107 Joneson T et al (1996) RAC regulation of actin polymerization andproliferation by a pathway distinct from Jun kinase Science 2741374ndash1376

108 Bhavsar AP et al (2013) The Salmonella type III effector SspH2specifically exploits the NLR co-chaperone activity of SGT1 to subvertimmunity PLoS Pathog 9 e1003518

109 Baruch K et al (2011) Metalloprotease type III effectors thatspecifically cleave JNK and NF-kappaB EMBO J 30 221ndash231

110 Yen H et al (2010) NleC a type III secretion protease compromises NF-kappaB activation by targeting p65RelA PLoS Pathog 6 e1001231

  • Detection of enteric pathogens by the nodosome
    • Distinguishing friend from foe in the gut
    • NOD proteins in pathogen detection and maintenance of gut immune homeostasis
    • Formation of the nodosome
    • Detection of bacterial virulence factors by the nodosome
    • Evolution of the NOD1 signaling pathway
    • Concluding remarks
    • Acknowledgments
    • Supplementary data
      • References

Review Trends in Immunology March 2014 Vol 35 No 3

transgenic expression of a-defensin in Paneth cells [20]These data highlight the importance of NOD2 expressionin Paneth cells of the crypt epithelium for maintaininghomeostasis of the ileal mucosa

Collectively these studies highlight the importance ofNOD1 and NOD2 in the detection and control of pathogensat the epithelial surface To understand immune homeo-stasis it is important to be familiar with the signalsactivating this surveillance system and to know the iden-tities of host proteins participating in the NOD1NOD2signaling pathway

Formation of the nodosomeThe NOD1 and NOD2 signaling pathways can be triggeredby the presence of peptidoglycan fragments in the host cellcytosol which might be indicative of bacterial invasion orescape of bacteria from a pathogen-containing vacuoleDiaminopimelic-acid-type peptidoglycan fragments de-rived from Gram-negative bacteria such as g-D-gluta-myl-meso-diaminopimelic acid (iE-DAP) lead to theactivation of the NOD1 signaling pathway [2122] whereasmuramyl dipeptide (MurNAc-L-Ala-D-isoGln) ndash a peptido-glycan motif common to all bacteria ndash activates the NOD2signaling pathway [2324]

Upon stimulation with peptidoglycan NOD1 or NOD2form a protein complex termed the nodosome which con-tains receptor-interacting protein (RIP)2 [2526] Recruit-ment of RIP2 to the nodosome leads to activation of NF-kBand mitogen-activated protein (MAP) kinases [72728]thereby inducing proinflammatory and antimicrobialresponses [51529] Furthermore NOD1 and NOD2 inter-act with BID BH3 interacting-domain death agonist aBCL2 family protein thereby providing a link betweeninflammation and programmed cells death [30] Severalstudies have suggested that recruitment of NOD1 andNOD2 to the cell membrane is required for the formationof a functional nodosome For example NOD1 is recruited tothe membrane at the site of bacterial entry during S flexneriinfection where it colocalizes with NF-kB essential modula-tor (NEMO) a key component of the NF-kB signaling com-plex [31] Similarly recruitment of NOD2 to the membraneis required for responding to stimulation of intestinal epi-thelial cells with muramyl dipeptide [32] NOD2 promotesthe membrane recruitment of RIP2 [33] leading to ubiqui-tinylation of RIP2 and NEMO [3435] The nodosome con-tains the co-chaperone-like ubiquitin-ligase-associatedprotein SGT1 suppressor of G2 allele of SKP1 which isrequired for NF-kB activation [3637] presumably becauseit activates signaling components by assisting in the ubiqui-tinylation of NOD1 RIP2 andor NEMO Additional reg-ulators acting downstream of NOD2 in the signaling cascadehave been identified in genome-wide small interfering RNA(siRNA) screens [3839] However the functional mecha-nism leading to a membrane association of NOD1 and NOD2has long remained elusive

Recently a siRNA screen identified FRMPD2 FERMand PDZ domain containing 2 as a membrane-scaffoldingcomplex that supports a basolateral localization of NOD2in epithelial cells [38] Furthermore small Rho GTPaseswere identified as components of the NOD1 nodosomewhich provides a plausible explanation for its assembly

124

at the membrane [40] Small Rho GTPases are a family ofmembrane-bound signaling proteins that transition be-tween an inactive GDP-bound form and an active GTP-bound form The transition from an inactive to an activeform is catalyzed by guanosine nucleotide-exchange factors(GEFs) whereas GTPase-activating proteins (GAPs) accel-erate GTP hydrolysis thereby facilitating transition froman active to an inactive form of small Rho GTPases [41]The small Rho GTPases studied most extensively includeRAC1 cell division control protein 42 homolog (CDC42)and Ras homolog gene family member A (RHOA) Activeforms of the small Rho GTPases RAC1 CDC42 and RHOAcan activate NF-kB [42] Recent evidence suggests thatNF-kB activation mediated by small Rho GTPases requiresfunctional NOD1 RIP1 and RIP2 proteins [4043]

NOD2 colocalizes with the activated form of RAC1 inmembrane ruffles indicating that this Rho GTPase mightbe present in nodosomes [44] Furthermore NOD2 coloca-lizes with GEF-H1 a GEF for RHOA [45] Evidence for aninteraction of NOD1 with the activated forms of RAC1 andCDC42 comes from the observation that these proteins canbe coimmunoprecipitated [40] Similarly the small RhoGTPase RAC2 colocalizes with RIP2 in membrane rufflesand both proteins are present in a protein complex [43] Inplants the heat shock protein (HSP)90 chaperone bindsRAC1 in innate immune protein complexes [46] and thisinteraction is thought to function in the recruitment ofinnate immune receptors to the membrane-bound smallRho GTPase [47] Interestingly the nodosome of mammalscontains HSP90 [48] the presence of which is required forNF-kB activation mediated by NOD1 [40] and NOD2 [37]These observations raise the possibility that similar to itsfunction in plants HSP90 of mammals associates withNOD1 and NOD2 and functions in recruiting the resultingprotein complexes to the activated forms of membrane-bound small Rho GTPases [48] The membrane localizationof small Rho GTPases is essential for their ability toactivate the nodosome because a constitutively active formof RAC1 lacking its prenyl-group is unable to activateNOD1 [40] Thus the picture emerging from these studiesis that excessive activation of the membrane-bound pro-teins RAC1 CDC42 or RHOA leads to assembly of thenodosome at the plasma membrane a process that ulti-mately results in NF-kB activation The finding that acti-vation of RAC1 CDC42 and RHOA triggers the NOD1signaling pathway has important ramifications becausesmall Rho GTPases are well-known targets of bacterialvirulence factors [49] (Box 1)

Detection of bacterial virulence factors by thenodosomeVirulence factors activating small Rho GTPases are partic-ularly common among enteric pathogens (Figure 1) Forexample many type III secretion systems (T3SSs) of entericpathogens inject proteins termed effectors into host cellsthat activate small Rho GTPases The T3SS effectors IpgB1from S flexneri EspT from Citrobacter rodentium and SopEfrom S Typhimurium serve as GEFs that activate RAC1and CDC42 [50ndash52] The T3SS effectors Map from entero-pathogenic E coli and SopE2 from S Typhimurium serve asGEFs that activate CDC42 [5053] Furthermore EspM2

Box 1 Small Rho GTPases are common targets for bacterial

virulence factors

Over the past two decades manipulation of small Rho GTPases has

emerged as a conserved pattern in bacterial pathogenesis (reviewed

in [49]) For example the T3SS encoded by Salmonella pathogeni-

city island 1 triggers actin rearrangements and NF-kB activation in

host cells [6970] by injecting effector proteins into the cytosol that

activate Rac1 and CDC42 [52] In addition to the many effector

proteins and toxins from a variety of enteric pathogens which

activate small Rho GTPases (see Figure 1 in main text) there are

multiple examples of virulence factors that inactivate these

molecular switches For instance Clostridium difficile toxin A and

B glycosylate Rho GTPases thereby inhibiting their function

[101102] The T3SS effector proteins ExoS of Pseudomonas

aeruginosa YopE of Yersinia pseudotuberculosis and SptP of S

Typhimurium inhibit the function of small Rho GTPases by acting as

GAPs [103ndash106]

Small Rho GTPases mediate actin polymerization and NF-kB

activation through two distinct pathways [107] A model for the

pathway leading to NF-kB activation is shown in Figure 1 main text

Interestingly some virulence factors of enteric pathogens target

components of the signaling pathway that are located downstream

of small Rho GTPases For example the S Typhimurium T3SS

effector protein SspH2 Salmonella secreted protein H2 cooperates

with the NLR co-chaperone SGT1 to ubiquitinate NOD1 thereby

inducing IL-8 secretion [108] (see Figure 1 in main text) In case of

enteropathogenic Escherichia coli the T3SS effector proteins NleD

non-LEE-encoded effector D and NleC function in silencing this

signaling pathway by cleaving C-Jun N-terminal kinase (JNK) and

the NF-kB p65 subunit respectively [109110]

Review Trends in Immunology March 2014 Vol 35 No 3

from enterohemorrhagic E coli and EspM2 from C roden-tium serve as GEFs for RHOA [54] The T3SS effectorsIpgB2 and OspB from S flexneri activate GEF-H1 whichin turn activates RHOA [5055] The S Typhimurium inosi-tol phosphatase SopB alters the inositol phosphate (IP)metabolism of the host cell thereby indirectly activatingCDC42 [5657] Recent studies have suggested that VAV2can activate CDC42 after it senses changes in the IP metab-olism [58] which suggest a possible mechanism for SopB-mediated CDC42 activation Cytotoxic necrotizing factor(CNF)1 ndash a toxin produced by uropathogenic E coli strainsndash constitutively activates RAC1 by inactivating its GTPaseactivity through deamidation of a glutamine residue [59ndash61] Finally Cam jejuni secretes Cia proteins through itsflagellar apparatus [62ndash65] and these proteins are ulti-mately translocated into the cytosol of host cells [66] wherethey contribute to activation of RAC1 [67] A second path-way by which Cam jejuni elicits RAC1 activation is CadF-mediated binding of fibronectin to the bacterial surfacewhich induces a b1-integrin-dependent signaling pathwayleading to the activation of two GEFs termed dedicator ofcytokinesis (DOCK)180 and T cell lymphoma invasion andmetastasis (TIAM)-1 [68] (Figure 1)

It is well established that activation of small RhoGTPases by bacterial virulence factors leads to inductionof MAP kinase signaling and nuclear translocation of NF-kB [526169ndash74] but evidence that the NOD1RIP2RIP1signaling pathway might be involved in this process hasemerged only recently The first indication that bacterialvirulence factors might activate the nodosome was theobservation that engagement of GEF-H1 by the S flexneriT3SS effectors IpgB2 and OspB led to NF-kB activationthat was NOD1 dependent [55] The S Typhimurium T3SSeffector SipA was subsequently shown to induce NF-kB

activation through a NOD1NOD2-dependent signalingpathway [12] Work with the E coli CNF-1 toxin estab-lished a clear role for RAC2 in inducing RIP1RIP2-depen-dent NF-kB activation [43] Finally activation of RAC1 bythe S Typhimurium T3SS effector SopE was shown to leadto assembly of the NOD1 nodosome at the host cell mem-brane thereby inducing NF-kB activation [40] The gua-nosine nucleotide-exchange factor activity of SopE isrequired for NF-kB activation [75] and for the recruitmentof NOD1 to membrane ruffles [40] The observation thatSopE can activate inflammasome-dependent cytokine mat-uration [7677] might be a consequence of nodosome acti-vation because NOD1 is known to enhance interleukin(IL)-1b secretion [78] IL-1b secretion requires two signalsThe first signal stimulates TLRs or NOD proteins therebydriving NF-kB-dependent expression of the IL1B genewhich leads to the production of pro-IL-1b The secondsignal stimulates NLRs to activate caspase-1 which inturn cleaves pro-IL-1b into its active form NOD1-depen-dent IL-1b secretion [78] is likely an indirect consequenceof NF-kB activation (signal 1) rather than resulting from adirect activation of caspase-1 (signal 2)

Not all effector proteins that activate small Rho GTPasesdo necessarily activate NF-kB For example SopE andSopE2 are both GEFs for RAC1 [53] However althoughan S Typhimurium strain translocating only SopE inducesproinflammatory responses in host cells [40] a strain trans-locating only SopE2 does not [73] Thus the signal detectedby NOD1 might be an excessive or prolonged activation ofsmall Rho GTPases which is observed for instance withconstitutively active forms of RAC1 CDC42 and RHOA[42] This model suggests that proinflammatory responsesare not observed when Rho GTPases are activated duringprocess involved in normal cell physiology

Collectively these data suggest that excessive activa-tion of small Rho GTPases by bacterial virulence factors orby the presence of peptidoglycan fragments in the cytosolare pathogen-induced processes that activate the NOD1signaling pathway Although the detection of peptidogly-can fragments in the host cell cytosol evidently representsan innate immune surveillance mechanism the situationis less clear-cut in case of bacterial virulence factors Onebenefit to the pathogen of activating small Rho GTPases isthat this process leads to cytoskeletal rearrangements(reviewed in [79]) promoting bacterial entry into host cells(reviewed in [80]) or the formation of pedestals on epithe-lial surfaces (reviewed in [81]) A byproduct of deployingvirulence factors to induce these actin rearrangementswould in turn be the induction of proinflammatoryresponses that are aimed at killing microbes [82] whichcould be viewed as the cost of doing business By this logicmonitoring the activation state of Rho GTPases could beconsidered a NOD1-dependent immune surveillance mech-anism that sets off an alarm when it detects breaking andentering by enteric pathogens This is reminiscent of effec-tor-triggered immune responses in plants which detectbacterial virulence factors either directly or through theireffects on host targets (reviewed in [8384])

An alternative but not mutually exclusive interpreta-tion of the data would be that enteric pathogens deployvirulence factors that activate the NOD1 pathway because

125

Intesnal lumenCadF

Fn

Integrinβ1

IpgB2

OspB

GEF-H1

EspM2 SopB Map IpgB1 Pepdo-glycan

RHOA

GDP

PI3-kinase

CDC42

SopE2 EspT

SopERAC1

FAK

DOCK180

TIAM-1

RHOA CDC42 RAC1

HSP90NOD1

RIP1RIP2

NEMOSGT1

SspH2

Ikk

IκB NF-κB

JNK ERK12

NF-κB AP-1

Epithelialcell Nucleus

Proinflammatorygene expression

GDP

GTP GTPCNF1

GTP

GDP GDP GDP

Nodosome

PIP

VAV2

GTP GTP GTP

GDP GDPGDP

TRENDS in Immunology

Figure 1 Model for activation of the Nucleotide-binding oligomerization domain protein (NOD)1 nodosome in epithelial cells by diaminopimelic acid-type peptidoglycan or

bacterial virulence factors which requires excessive or prolonged activation of small Rho GTPases Peptidoglycan (blue box) or bacterial virulence factors (blue circles)

engage host proteins (red circles) to activate (arrows) the nodosome thereby inducing the expression of proinflammatory genes AP-1 activator protein-1 CDC42 cell

division control protein 42 homolog CNF1 cytotoxic necrotizing factor 1 DOCK dedicator of cytokinesis ERK extracellular signal-regulated kinase FAK focal adhesion

kinase Fn fibronectin GEF guanosine nucleotide-exchange factor HSP90 heat shock protein 90 IkB nuclear factor of kappa light polypeptide gene enhancer in B cells

inhibitor Ikk I kB kinase JNK C-Jun N-terminal kinase NEMO NF-kB essential modulator NF-kB nuclear factor-kB PI3 phosphoinositide 3 PIP phosphatidylinositol

phosphate RAC1 Ras-related C3 botulinum toxin substrate 1 RHOA Ras homolog gene family member A RIP receptor-interacting protein SGT1 suppressor of G-two

allele of Skp1 SspH2 Salmonella secreted protein H2 TIAM-1 T cell lymphoma invasion and metastasis-1

Review Trends in Immunology March 2014 Vol 35 No 3

126

Review Trends in Immunology March 2014 Vol 35 No 3

they benefit from the ensuing inflammatory host responseThis viewpoint is supported by recent data suggesting thatintestinal inflammation confers a fitness advantage uponS Typhimurium E coli and C rodentium during theircompetition with the obligate anaerobic microbial commu-nity that dominates the healthy gut [85ndash87] A bloom of STyphimurium and E coli in the inflamed gut is supportedby host-derived electron acceptors which are generated asbyproducts of the inflammatory host response [87ndash89]Interestingly the SopE protein which is present in onlya subset of S Typhimurium isolates alters host responsesby increasing expression of inducible NO synthase (iNOS)an enzyme that produces NO Conversion of NO to nitrateincreases growth of SopE-producing S Typhimuriumstrains in the intestinal lumen through nitrate respiration[88] Enhanced growth of S Typhimurium in the intestinallumen increases transmission of the pathogen [90] whichrepresents a potent selective force for the evolution ofenteric pathogens In other words the reason for deployingvirulence factors that trigger the NOD1 signaling pathwaymight be that the ensuing host response selectively feedsthe respective enteric pathogens

In summary manipulation of small Rho GTPases bybacterial virulence factors is a common theme in microbialpathogenesis (Box 1) and detection of these pathogen-induced processes by the innate immune system enablesthe host to distinguish pathogens from microbes with lowerpathogenic potential From an evolutionary point of view itis also interesting to note that detection of bacterial effec-tor proteins is a feature of the innate immune system thatis conserved from plants to mammals This observationraises the question whether signaling pathways involvedin detecting these patterns of pathogenesis are also con-served between the different phyla

Evolution of the NOD1 signaling pathwayNOD1 and NOD2 of mammals are thought to have evolvedindependently from plant NLRs suggesting that function-al similarities and the presence of similar protein domains(ie the presence of similar C-terminal leucine-richrepeats and similar central nucleotide-binding oligomeri-zation motifs) are features that developed independently indifferent lineages Furthermore the Drosophila melano-gaster genome does not encode homologs of the mammalianNOD1 or NOD2 proteins (reviewed in [9192]) Insteaddiaminopimelic acid-type peptidoglycan from Gram-nega-tive bacteria is detected in D melanogaster through theimmune deficiency (IMD) pathway which shares homologyto the tumor necrosis factor (TNF)-a signaling pathway inmammals [93] In the IMD pathway peptidoglycan isdetected by the transmembrane receptor peptidoglycan-recognition protein (PGRP)-LC [94] or the cytoplasmicreceptor PGRP-LE [95] Upon binding of peptidoglycanPGRP-LC and PGRP-LE activate IMD a death domainprotein with homology to RIP1 the RIP kinase associatedwith TNF-a-dependent NF-kB activation [96] In turnIMD activates the transcription factor Relish which is amember of the NF-kB family [97]

Interestingly recent studies raise the possibility thatthe IMD and NOD1 signaling pathways represent evolu-tionary conserved signaling cascades for the detection of

diaminopimelic acid-type peptidoglycan (reviewed in [98])First the E coli CNF-1 toxin constitutively activatesRAC2 in Drosophila cells thereby inducing the IMD path-way [43] and diaminopimelic acid-type peptidoglycan acti-vates the NOD1-signalling pathway in human cellsthrough a RAC1-dependent mechanism [40] Thus a re-quirement for small Rho GTPases is a feature sharedbetween the IMD and NOD1 pathways but absent fromthe TNF-a signaling pathway Second human RAC2induces NF-kB activation through RIP1 and RIP2 [43]These data suggest that the IMD homolog RIP1 is not onlyinvolved in TNF-a signaling but also participates indetecting the activation state of small Rho GTPases whichconfirms the similarities between the IMD and NOD1signaling pathways There are however some notable dif-ferences between the IMD and NOD1 pathways includingthe absence of a NOD1 homolog in insects and the fact thatmammalian PGRPs do not function in the NOD1 signalingpathway [99]

In summary recent evidence provides some support forthe idea that the signaling pathways detecting diamino-pimelic acid-type peptidoglycan in mammals and insectsshare a common ancestry (reviewed in [98]) This observa-tion along with the finding that the Drosophila Toll proteinand the homologous mammalian TLRs both function ascellular sensors of microbes highlights the conservation ofinnate immune surveillance mechanism within the animalkingdom

Concluding remarksThe picture emerging from these studies is that NODproteins provide epithelial cells with important sentinelfunctions for detecting pathogen-induced violations of theintegrity of the host cell cytoplasm Many enteric patho-gens produce virulence factors that manipulate the activityof small Rho GTPases to mediate attachment or entry or toinhibit phagocytosis (Figure 1 and Box 1) As a result thehost can detect the presence of pathogens by monitoringthe activation state of small Rho GTPases The down-stream signaling pathways enable the intestinal epitheli-um to mount responses that are appropriate to the threatincluding NF-kB activation activation of the autophagypathway and the release of antimicrobial peptides Theability of the epithelium to react appropriately is impor-tant for balancing host responses against microbial com-munities in the gastrointestinal tract When thesemechanisms for maintaining immune homeostasis aredisrupted by mutations that impair NOD2 signaling orthe autophagy pathway the host has an increasing risk ofdeveloping intestinal inflammation

Direct evidence for the binding of NOD1 to peptidogly-can is lacking therefore it has been speculated that thisprotein might function in signal transduction rather thanserving as an innate immune receptor for peptidoglycan[100] Interestingly NOD1-dependent NF-kB activationelicited by diaminopimelic acid-type peptidoglycanrequires the presence of active RAC1 [40] thereby raisingthe possibility that peptidoglycan is sensed in mammalsby an innate immune receptor acting upstream of thissmall Rho GTPase (Figure 1) which represents an excitingarea for future research

127

Review Trends in Immunology March 2014 Vol 35 No 3

AcknowledgmentsWork in AJBrsquos laboratory is supported by Public Health Service GrantsAI044170 and AI076246 AMK is supported by the American HeartAssociation Grant 12SDG12220022

Appendix A Supplementary dataSupplementary data associated with this article can befound in the online version at httpdxdoiorg101016jit201310009

References1 Gewirtz AT et al (2001) Cutting edge bacterial flagellin activates

basolaterally expressed TLR5 to induce epithelial proinflammatorygene expression J Immunol 167 1882ndash1885

2 Weber B et al (2009) Intestinal macrophages differentiation andinvolvement in intestinal immunopathologies Semin Immunopathol31 171ndash184

3 Vance RE et al (2009) Patterns of pathogenesis discrimination ofpathogenic and nonpathogenic microbes by the innate immunesystem Cell Host Microbe 6 10ndash21

4 Biswas A and Kobayashi KS (2013) Regulation of intestinalmicrobiota by the NLR protein family Int Immunol 25 207ndash214

5 Kim JG et al (2004) Nod1 is an essential signal transducer inintestinal epithelial cells infected with bacteria that avoidrecognition by toll-like receptors Infect Immun 72 1487ndash1495

6 Chamaillard M et al (2004) Battling enteroinvasive bacteria Nod1comes to the rescue Trends Microbiol 12 529ndash532

7 Girardin SE et al (2001) CARD4Nod1 mediates NF-kappaB andJNK activation by invasive Shigella flexneri EMBO Rep 2 736ndash742

8 Zilbauer M et al (2007) A major role for intestinal epithelialnucleotide oligomerization domain 1 (NOD1) in eliciting hostbactericidal immune responses to Campylobacter jejuni CellMicrobiol 9 2404ndash2416

9 Viala J et al (2004) Nod1 responds to peptidoglycan delivered by theHelicobacter pylori cag pathogenicity island Nat Immunol 5 1166ndash1174

10 Allison CC et al (2009) Helicobacter pylori induces MAPKphosphorylation and AP-1 activation via a NOD1-dependentmechanism J Immunol 183 8099ndash8109

11 Geddes K et al (2010) Nod1 and Nod2 regulation of inflammation inthe Salmonella colitis model Infect Immun 78 5107ndash5115

12 Keestra AM et al (2011) A Salmonella virulence factor activates theNOD1NOD2 signaling pathway MBio 2 e00266ndash11

13 Travassos LH et al (2010) Nod1 and Nod2 direct autophagy byrecruiting ATG16L1 to the plasma membrane at the site of bacterialentry Nat Immunol 11 55ndash62

14 Ogura Y et al (2001) Nod2 a Nod1Apaf-1 family member that isrestricted to monocytes and activates NF-kappaB J Biol Chem 2764812ndash4818

15 Kobayashi KS et al (2005) Nod2-dependent regulation of innate andadaptive immunity in the intestinal tract Science 307 731ndash734

16 Hampe J et al (2001) Association between insertion mutation inNOD2 gene and Crohnrsquos disease in German and British populationsLancet 357 1925ndash1928

17 Wehkamp J et al (2004) NOD2 (CARD15) mutations in Crohnrsquosdisease are associated with diminished mucosal alpha-defensinexpression Gut 53 1658ndash1664

18 Salzman NH et al (2003) Protection against enteric salmonellosis intransgenic mice expressing a human intestinal defensin Nature 422522ndash526

19 Chu H et al (2012) Human alpha-defensin 6 promotes mucosalinnate immunity through self-assembled peptide nanonets Science337 477ndash481

20 Biswas A et al (2010) Induction and rescue of Nod2-dependent Th1-driven granulomatous inflammation of the ileum Proc Natl AcadSci USA 107 14739ndash14744

21 Girardin SE et al (2003) Nod1 detects a unique muropeptide fromgram-negative bacterial peptidoglycan Science 300 1584ndash1587

22 Chamaillard M et al (2003) An essential role for NOD1 in hostrecognition of bacterial peptidoglycan containing diaminopimelicacid Nat Immunol 4 702ndash707

128

23 Inohara N et al (2003) Host recognition of bacterial muramyldipeptide mediated through NOD2 Implications for Crohnrsquosdisease J Biol Chem 278 5509ndash5512

24 Girardin SE et al (2003) Nod2 is a general sensor of peptidoglycanthrough muramyl dipeptide (MDP) detection J Biol Chem 2788869ndash8872

25 Tattoli I et al (2007) The nodosome Nod1 and Nod2 controlbacterial infections and inflammation Semin Immunopathol 29289ndash301

26 Rosenstiel P et al (2006) A short isoform of NOD2CARD15 NOD2-S is an endogenous inhibitor of NOD2receptor-interacting proteinkinase 2-induced signaling pathways Proc Natl Acad Sci USA103 3280ndash3285

27 Inohara N et al (1999) Nod1 an Apaf-1-like activator of caspase-9and nuclear factor-kappaB J Biol Chem 274 14560ndash14567

28 Park JH et al (2007) RICKRIP2 mediates innate immuneresponses induced through Nod1 and Nod2 but not TLRs JImmunol 178 2380ndash2386

29 Grubman A et al (2010) The innate immune molecule NOD1regulates direct killing of Helicobacter pylori by antimicrobialpeptides Cell Microbiol 12 626ndash639

30 Yeretssian G et al (2011) Non-apoptotic role of BID in inflammationand innate immunity Nature 474 96ndash99

31 Kufer TA et al (2008) The pattern-recognition molecule Nod1 islocalized at the plasma membrane at sites of bacterial interactionCell Microbiol 10 477ndash486

32 Barnich N et al (2005) Membrane recruitment of NOD2 in intestinalepithelial cells is essential for nuclear factor-kappaB activation inmuramyl dipeptide recognition J Cell Biol 170 21ndash26

33 Lecine P et al (2007) The NOD2-RICK complex signals from theplasma membrane J Biol Chem 282 15197ndash15207

34 Abbott DW et al (2004) The Crohnrsquos disease protein NOD2requires RIP2 in order to induce ubiquitinylation of a novel site onNEMO Curr Biol 14 2217ndash2227

35 Hasegawa M et al (2008) A critical role of RICKRIP2polyubiquitination in Nod-induced NF-kappaB activation EMBO J27 373ndash383

36 da Silva Correia J et al (2007) SGT1 is essential for Nod1 activationProc Natl Acad Sci USA 104 6764ndash6769

37 Mayor A et al (2007) A crucial function of SGT1 and HSP90 ininflammasome activity links mammalian and plant innate immuneresponses Nat Immunol 8 497ndash503

38 Lipinski S et al (2012) RNAi screening identifies mediators of NOD2signaling implications for spatial specificity of MDP recognitionProc Natl Acad Sci USA 109 21426ndash21431

39 Warner N et al (2013) A genome-wide siRNA screen reveals positiveand negative regulators of the NOD2 and NF-kappaB signalingpathways Sci Signal 6 rs3

40 Keestra AM et al (2013) Manipulation of small Rho GTPases is apathogen-induced process detected by NOD1 Nature 496 233ndash237

41 Narumiya S (1996) The small GTPase Rho cellular functions andsignal transduction J Biochem 120 215ndash228

42 Perona R et al (1997) Activation of the nuclear factor-kappaB byRho CDC42 and Rac-1 proteins Genes Dev 11 463ndash475

43 Boyer L et al (2011) Pathogen-derived effectors trigger protectiveimmunity via activation of the Rac2 enzyme and the IMD or Ripkinase signaling pathway Immunity 35 536ndash549

44 Legrand-Poels S et al (2007) Modulation of Nod2-dependentNF-kappaB signaling by the actin cytoskeleton J Cell Sci 1201299ndash1310

45 Zhao Y et al (2012) Control of NOD2 and Rip2-dependent innateimmune activation by GEF-H1 Inflamm Bowel Dis 18 603ndash612

46 Thao NP et al (2007) RAR1 and HSP90 form a complex with RacRop GTPase and function in innate-immune responses in rice PlantCell 19 4035ndash4045

47 Chen L et al (2010) The HopSti1-Hsp90 chaperone complexfacilitates the maturation and transport of a PAMP receptor in riceinnate immunity Cell Host Microbe 7 185ndash196

48 Hahn JS (2005) Regulation of Nod1 by Hsp90 chaperone complexFEBS Lett 579 4513ndash4519

49 Aktories K et al (2000) Rho GTPases as targets of bacterial proteintoxins Biol Chem 381 421ndash426

Review Trends in Immunology March 2014 Vol 35 No 3

50 Huang Z et al (2009) Structural insights into host GTPase isoformselection by a family of bacterial GEF mimics Nat Struct Mol Biol16 853ndash860

51 Bulgin RR et al (2009) EspT triggers formation of lamellipodia andmembrane ruffles through activation of Rac-1 and Cdc42 CellMicrobiol 11 217ndash229

52 Hardt WD et al (1998) S typhimurium encodes an activator of RhoGTPases that induces membrane ruffling and nuclear responses inhost cells Cell 93 815ndash826

53 Friebel A et al (2001) SopE and SopE2 from Salmonellatyphimurium activate different sets of RhoGTPases of the host cellJ Biol Chem 276 34035ndash34040

54 Arbeloa A et al (2010) EspM2 is a RhoA guanine nucleotide exchangefactor Cell Microbiol 12 654ndash664

55 Fukazawa A et al (2008) GEF-H1 mediated control of NOD1dependent NF-kappaB activation by Shigella effectors PLoSPathog 4 e1000228

56 Norris FA et al (1998) SopB a protein required for virulence ofSalmonella dublin is an inositol phosphate phosphatase Proc NatlAcad Sci USA 95 14057ndash14059

57 Zhou D et al (2001) A Salmonella inositol polyphosphatase acts inconjunction with other bacterial effectors to promote host cell actincytoskeleton rearrangements and bacterial internalization MolMicrobiol 39 248ndash259

58 Krause-Gruszczynska M et al (2011) The signaling pathway ofCampylobacter jejuni-induced Cdc42 activation role of fibronectinintegrin beta1 tyrosine kinases and guanine exchange factor Vav2Cell Commun Signal 9 32

59 Schmidt G et al (1997) Gln 63 of Rho is deamidated by Escherichiacoli cytotoxic necrotizing factor-1 Nature 387 725ndash729

60 Flatau G et al (1997) Toxin-induced activation of the G protein p21Rho by deamidation of glutamine Nature 387 729ndash733

61 Lerm M et al (1999) Deamidation of Cdc42 and Rac by Escherichiacoli cytotoxic necrotizing factor 1 activation of c-Jun N-terminalkinase in HeLa cells Infect Immun 67 496ndash503

62 Konkel ME et al (1999) Identification of proteins required for theinternalization of Campylobacter jejuni into cultured mammaliancells Adv Exp Med Biol 473 215ndash224

63 Rivera-Amill V and Konkel ME (1999) Secretion of Campylobacterjejuni Cia proteins is contact dependent Adv Exp Med Biol 473225ndash229

64 Malik-Kale P et al (2008) Culture of Campylobacter jejuni withsodium deoxycholate induces virulence gene expression JBacteriol 190 2286ndash2297

65 Konkel ME et al (2004) Secretion of virulence proteins fromCampylobacter jejuni is dependent on a functional flagellar exportapparatus J Bacteriol 186 3296ndash3303

66 Neal-McKinney JM and Konkel ME (2012) The Campylobacterjejuni CiaC virulence protein is secreted from the flagellum anddelivered to the cytosol of host cells Front Cell Infect Microbiol2 31

67 Eucker TP and Konkel ME (2012) The cooperative action ofbacterial fibronectin-binding proteins and secreted proteinspromote maximal Campylobacter jejuni invasion of host cells bystimulating membrane ruffling Cell Microbiol 14 226ndash238

68 Boehm M et al (2011) Major host factors involved in epithelial cellinvasion of Campylobacter jejuni role of fibronectin integrin beta1FAK Tiam-1 and DOCK180 in activating Rho GTPase Rac1 FrontCell Infect Microbiol 1 17

69 Chen LM et al (1996) Requirement of CDC42 for Salmonella-induced cytoskeletal and nuclear responses Science 274 2115ndash2118

70 Hobbie S et al (1997) Involvement of mitogen-activated proteinkinase pathways in the nuclear responses and cytokine productioninduced by Salmonella typhimurium in cultured intestinal epithelialcells J Immunol 159 5550ndash5559

71 Savkovic SD et al (1997) Activation of NF-kappaB in intestinalepithelial cells by enteropathogenic Escherichia coli Am J Physiol273 C1160ndashC1167

72 Zurawski DV et al (2008) The NleEOspZ family of effector proteinsis required for polymorphonuclear transepithelial migration acharacteristic shared by enteropathogenic Escherichia coli andShigella flexneri infections Infect Immun 76 369ndash379

73 Figueiredo JF et al (2009) Salmonella enterica Typhimurium SipAinduces CXC-chemokine expression through p38MAPK and JUNpathways Microbes Infect 11 302ndash310

74 Raymond B et al (2011) The WxxxE effector EspT triggersexpression of immune mediators in an ErkJNK and NF-kappaB-dependent manner Cell Microbiol 13 1881ndash1893

75 Schlumberger MC et al (2003) Amino acids of the bacterial toxinSopE involved in G nucleotide exchange on Cdc42 J Biol Chem 27827149ndash27159

76 Hoffmann C et al (2010) In macrophages caspase-1 activation bySopE and the type III secretion system-1 of S typhimurium canproceed in the absence of flagellin PLoS ONE 5 e12477

77 Muller AJ et al (2009) The S Typhimurium effector SopE inducescaspase-1 activation in stromal cells to initiate gut inflammation CellHost Microbe 6 125ndash136

78 Yoo NJ et al (2002) Nod1 a CARD protein enhances pro-interleukin-1beta processing through the interaction with pro-caspase-1 Biochem Biophys Res Commun 299 652ndash658

79 Haglund CM and Welch MD (2011) Pathogens and polymersmicrobe-host interactions illuminate the cytoskeleton J Cell Biol195 7ndash17

80 Patel JC and Galan JE (2005) Manipulation of the host actincytoskeleton by Salmonella ndash all in the name of entry Curr OpinMicrobiol 8 10ndash15

81 Celli J et al (2000) Enteropathogenic Escherichia coli (EPEC)attachment to epithelial cells exploiting the host cell cytoskeletonfrom the outside Cell Microbiol 2 1ndash9

82 Boquet P and Lemichez E (2003) Bacterial virulence factorstargeting Rho GTPases parasitism or symbiosis Trends Cell Biol13 238ndash246

83 Jones JD and Dangl JL (2006) The plant immune system Nature444 323ndash329

84 Stuart LM et al (2013) Effector-triggered versus pattern-triggeredimmunity how animals sense pathogens Nat Rev Immunol 13199ndash206

85 Stecher B et al (2007) Salmonella enterica serovar typhimuriumexploits inflammation to compete with the intestinal microbiotaPLoS Biol 5 2177ndash2189

86 Lupp C et al (2007) Host-mediated inflammation disrupts theintestinal microbiota and promotes the overgrowth ofEnterobacteriaceae Cell Host Microbe 2 119ndash129

87 Winter SE et al (2013) Host-derived nitrate boosts growth of E coliin the inflamed gut Science 339 708ndash711

88 Lopez CA et al (2012) Phage-mediated acquisition of a type IIIsecreted effector protein boosts growth of salmonella by nitraterespiration MBio 3 e00143-12

89 Winter SE et al (2010) Gut inflammation provides a respiratoryelectron acceptor for Salmonella Nature 467 426ndash429

90 Lawley TD et al (2008) Host transmission of Salmonella entericaserovar Typhimurium is controlled by virulence factors andindigenous intestinal microbiota Infect Immun 76 403ndash416

91 Bonardi V et al (2012) A new eye on NLR proteins focused on clarityor diffused by complexity Curr Opin Immunol 24 41ndash50

92 Staskawicz BJ et al (2001) Common and contrasting themes ofplant and animal diseases Science 292 2285ndash2289

93 Pinheiro VB and Ellar DJ (2006) How to kill a mocking bug CellMicrobiol 8 545ndash557

94 Choe KM et al (2002) Requirement for a peptidoglycan recognitionprotein (PGRP) in Relish activation and antibacterial immuneresponses in Drosophila Science 296 359ndash362

95 Takehana A et al (2002) Overexpression of a pattern-recognitionreceptor peptidoglycan-recognition protein-LE activates imdrelish-mediated antibacterial defense and the prophenoloxidase cascade inDrosophila larvae Proc Natl Acad Sci USA 99 13705ndash13710

96 Georgel P et al (2001) Drosophila immune deficiency (IMD) is adeath domain protein that activates antibacterial defense and canpromote apoptosis Dev Cell 1 503ndash514

97 Dushay MS et al (1996) Origins of immunity relish a compoundRel-like gene in the antibacterial defense of Drosophila Proc NatlAcad Sci USA 93 10343ndash10347

98 Stuart LM and Boyer L (2013) RhoGTPases ndash NODes for effector-triggered immunity in animals Cell Res 23 980ndash981

129

Review Trends in Immunology March 2014 Vol 35 No 3

99 Dziarski R and Gupta D (2010) Review mammalian peptidoglycanrecognition proteins (PGRPs) in innate immunity Innate Immun 16168ndash174

100 Murray PJ (2005) NOD proteins an intracellular pathogen-recognition system or signal transduction modifiers Curr OpinImmunol 17 352ndash358

101 Just I et al (1995) Glucosylation of Rho proteins by Clostridiumdifficile toxin B Nature 375 500ndash503

102 Ohguchi K et al (1996) Effects of Clostridium difficile toxin A andtoxin B on phospholipase D activation in human promyelocyticleukemic HL60 cells Infect Immun 64 4433ndash4437

103 Goehring UM et al (1999) The N-terminal domain of Pseudomonasaeruginosa exoenzyme S is a GTPase-activating protein for RhoGTPases J Biol Chem 274 36369ndash36372

104 Black DS and Bliska JB (2000) The RhoGAP activity of theYersinia pseudotuberculosis cytotoxin YopE is required forantiphagocytic function and virulence Mol Microbiol 37 515ndash527

130

105 Von Pawel-Rammingen U et al (2000) GAP activity of the YersiniaYopE cytotoxin specifically targets the Rho pathway a mechanism fordisruption of actin microfilament structure Mol Microbiol 36 737ndash748

106 Fu Y and Galan JE (1999) A salmonella protein antagonizes Rac-1and Cdc42 to mediate host-cell recovery after bacterial invasionNature 401 293ndash297

107 Joneson T et al (1996) RAC regulation of actin polymerization andproliferation by a pathway distinct from Jun kinase Science 2741374ndash1376

108 Bhavsar AP et al (2013) The Salmonella type III effector SspH2specifically exploits the NLR co-chaperone activity of SGT1 to subvertimmunity PLoS Pathog 9 e1003518

109 Baruch K et al (2011) Metalloprotease type III effectors thatspecifically cleave JNK and NF-kappaB EMBO J 30 221ndash231

110 Yen H et al (2010) NleC a type III secretion protease compromises NF-kappaB activation by targeting p65RelA PLoS Pathog 6 e1001231

  • Detection of enteric pathogens by the nodosome
    • Distinguishing friend from foe in the gut
    • NOD proteins in pathogen detection and maintenance of gut immune homeostasis
    • Formation of the nodosome
    • Detection of bacterial virulence factors by the nodosome
    • Evolution of the NOD1 signaling pathway
    • Concluding remarks
    • Acknowledgments
    • Supplementary data
      • References

Box 1 Small Rho GTPases are common targets for bacterial

virulence factors

Over the past two decades manipulation of small Rho GTPases has

emerged as a conserved pattern in bacterial pathogenesis (reviewed

in [49]) For example the T3SS encoded by Salmonella pathogeni-

city island 1 triggers actin rearrangements and NF-kB activation in

host cells [6970] by injecting effector proteins into the cytosol that

activate Rac1 and CDC42 [52] In addition to the many effector

proteins and toxins from a variety of enteric pathogens which

activate small Rho GTPases (see Figure 1 in main text) there are

multiple examples of virulence factors that inactivate these

molecular switches For instance Clostridium difficile toxin A and

B glycosylate Rho GTPases thereby inhibiting their function

[101102] The T3SS effector proteins ExoS of Pseudomonas

aeruginosa YopE of Yersinia pseudotuberculosis and SptP of S

Typhimurium inhibit the function of small Rho GTPases by acting as

GAPs [103ndash106]

Small Rho GTPases mediate actin polymerization and NF-kB

activation through two distinct pathways [107] A model for the

pathway leading to NF-kB activation is shown in Figure 1 main text

Interestingly some virulence factors of enteric pathogens target

components of the signaling pathway that are located downstream

of small Rho GTPases For example the S Typhimurium T3SS

effector protein SspH2 Salmonella secreted protein H2 cooperates

with the NLR co-chaperone SGT1 to ubiquitinate NOD1 thereby

inducing IL-8 secretion [108] (see Figure 1 in main text) In case of

enteropathogenic Escherichia coli the T3SS effector proteins NleD

non-LEE-encoded effector D and NleC function in silencing this

signaling pathway by cleaving C-Jun N-terminal kinase (JNK) and

the NF-kB p65 subunit respectively [109110]

Review Trends in Immunology March 2014 Vol 35 No 3

from enterohemorrhagic E coli and EspM2 from C roden-tium serve as GEFs for RHOA [54] The T3SS effectorsIpgB2 and OspB from S flexneri activate GEF-H1 whichin turn activates RHOA [5055] The S Typhimurium inosi-tol phosphatase SopB alters the inositol phosphate (IP)metabolism of the host cell thereby indirectly activatingCDC42 [5657] Recent studies have suggested that VAV2can activate CDC42 after it senses changes in the IP metab-olism [58] which suggest a possible mechanism for SopB-mediated CDC42 activation Cytotoxic necrotizing factor(CNF)1 ndash a toxin produced by uropathogenic E coli strainsndash constitutively activates RAC1 by inactivating its GTPaseactivity through deamidation of a glutamine residue [59ndash61] Finally Cam jejuni secretes Cia proteins through itsflagellar apparatus [62ndash65] and these proteins are ulti-mately translocated into the cytosol of host cells [66] wherethey contribute to activation of RAC1 [67] A second path-way by which Cam jejuni elicits RAC1 activation is CadF-mediated binding of fibronectin to the bacterial surfacewhich induces a b1-integrin-dependent signaling pathwayleading to the activation of two GEFs termed dedicator ofcytokinesis (DOCK)180 and T cell lymphoma invasion andmetastasis (TIAM)-1 [68] (Figure 1)

It is well established that activation of small RhoGTPases by bacterial virulence factors leads to inductionof MAP kinase signaling and nuclear translocation of NF-kB [526169ndash74] but evidence that the NOD1RIP2RIP1signaling pathway might be involved in this process hasemerged only recently The first indication that bacterialvirulence factors might activate the nodosome was theobservation that engagement of GEF-H1 by the S flexneriT3SS effectors IpgB2 and OspB led to NF-kB activationthat was NOD1 dependent [55] The S Typhimurium T3SSeffector SipA was subsequently shown to induce NF-kB

activation through a NOD1NOD2-dependent signalingpathway [12] Work with the E coli CNF-1 toxin estab-lished a clear role for RAC2 in inducing RIP1RIP2-depen-dent NF-kB activation [43] Finally activation of RAC1 bythe S Typhimurium T3SS effector SopE was shown to leadto assembly of the NOD1 nodosome at the host cell mem-brane thereby inducing NF-kB activation [40] The gua-nosine nucleotide-exchange factor activity of SopE isrequired for NF-kB activation [75] and for the recruitmentof NOD1 to membrane ruffles [40] The observation thatSopE can activate inflammasome-dependent cytokine mat-uration [7677] might be a consequence of nodosome acti-vation because NOD1 is known to enhance interleukin(IL)-1b secretion [78] IL-1b secretion requires two signalsThe first signal stimulates TLRs or NOD proteins therebydriving NF-kB-dependent expression of the IL1B genewhich leads to the production of pro-IL-1b The secondsignal stimulates NLRs to activate caspase-1 which inturn cleaves pro-IL-1b into its active form NOD1-depen-dent IL-1b secretion [78] is likely an indirect consequenceof NF-kB activation (signal 1) rather than resulting from adirect activation of caspase-1 (signal 2)

Not all effector proteins that activate small Rho GTPasesdo necessarily activate NF-kB For example SopE andSopE2 are both GEFs for RAC1 [53] However althoughan S Typhimurium strain translocating only SopE inducesproinflammatory responses in host cells [40] a strain trans-locating only SopE2 does not [73] Thus the signal detectedby NOD1 might be an excessive or prolonged activation ofsmall Rho GTPases which is observed for instance withconstitutively active forms of RAC1 CDC42 and RHOA[42] This model suggests that proinflammatory responsesare not observed when Rho GTPases are activated duringprocess involved in normal cell physiology

Collectively these data suggest that excessive activa-tion of small Rho GTPases by bacterial virulence factors orby the presence of peptidoglycan fragments in the cytosolare pathogen-induced processes that activate the NOD1signaling pathway Although the detection of peptidogly-can fragments in the host cell cytosol evidently representsan innate immune surveillance mechanism the situationis less clear-cut in case of bacterial virulence factors Onebenefit to the pathogen of activating small Rho GTPases isthat this process leads to cytoskeletal rearrangements(reviewed in [79]) promoting bacterial entry into host cells(reviewed in [80]) or the formation of pedestals on epithe-lial surfaces (reviewed in [81]) A byproduct of deployingvirulence factors to induce these actin rearrangementswould in turn be the induction of proinflammatoryresponses that are aimed at killing microbes [82] whichcould be viewed as the cost of doing business By this logicmonitoring the activation state of Rho GTPases could beconsidered a NOD1-dependent immune surveillance mech-anism that sets off an alarm when it detects breaking andentering by enteric pathogens This is reminiscent of effec-tor-triggered immune responses in plants which detectbacterial virulence factors either directly or through theireffects on host targets (reviewed in [8384])

An alternative but not mutually exclusive interpreta-tion of the data would be that enteric pathogens deployvirulence factors that activate the NOD1 pathway because

125

Intesnal lumenCadF

Fn

Integrinβ1

IpgB2

OspB

GEF-H1

EspM2 SopB Map IpgB1 Pepdo-glycan

RHOA

GDP

PI3-kinase

CDC42

SopE2 EspT

SopERAC1

FAK

DOCK180

TIAM-1

RHOA CDC42 RAC1

HSP90NOD1

RIP1RIP2

NEMOSGT1

SspH2

Ikk

IκB NF-κB

JNK ERK12

NF-κB AP-1

Epithelialcell Nucleus

Proinflammatorygene expression

GDP

GTP GTPCNF1

GTP

GDP GDP GDP

Nodosome

PIP

VAV2

GTP GTP GTP

GDP GDPGDP

TRENDS in Immunology

Figure 1 Model for activation of the Nucleotide-binding oligomerization domain protein (NOD)1 nodosome in epithelial cells by diaminopimelic acid-type peptidoglycan or

bacterial virulence factors which requires excessive or prolonged activation of small Rho GTPases Peptidoglycan (blue box) or bacterial virulence factors (blue circles)

engage host proteins (red circles) to activate (arrows) the nodosome thereby inducing the expression of proinflammatory genes AP-1 activator protein-1 CDC42 cell

division control protein 42 homolog CNF1 cytotoxic necrotizing factor 1 DOCK dedicator of cytokinesis ERK extracellular signal-regulated kinase FAK focal adhesion

kinase Fn fibronectin GEF guanosine nucleotide-exchange factor HSP90 heat shock protein 90 IkB nuclear factor of kappa light polypeptide gene enhancer in B cells

inhibitor Ikk I kB kinase JNK C-Jun N-terminal kinase NEMO NF-kB essential modulator NF-kB nuclear factor-kB PI3 phosphoinositide 3 PIP phosphatidylinositol

phosphate RAC1 Ras-related C3 botulinum toxin substrate 1 RHOA Ras homolog gene family member A RIP receptor-interacting protein SGT1 suppressor of G-two

allele of Skp1 SspH2 Salmonella secreted protein H2 TIAM-1 T cell lymphoma invasion and metastasis-1

Review Trends in Immunology March 2014 Vol 35 No 3

126

Review Trends in Immunology March 2014 Vol 35 No 3

they benefit from the ensuing inflammatory host responseThis viewpoint is supported by recent data suggesting thatintestinal inflammation confers a fitness advantage uponS Typhimurium E coli and C rodentium during theircompetition with the obligate anaerobic microbial commu-nity that dominates the healthy gut [85ndash87] A bloom of STyphimurium and E coli in the inflamed gut is supportedby host-derived electron acceptors which are generated asbyproducts of the inflammatory host response [87ndash89]Interestingly the SopE protein which is present in onlya subset of S Typhimurium isolates alters host responsesby increasing expression of inducible NO synthase (iNOS)an enzyme that produces NO Conversion of NO to nitrateincreases growth of SopE-producing S Typhimuriumstrains in the intestinal lumen through nitrate respiration[88] Enhanced growth of S Typhimurium in the intestinallumen increases transmission of the pathogen [90] whichrepresents a potent selective force for the evolution ofenteric pathogens In other words the reason for deployingvirulence factors that trigger the NOD1 signaling pathwaymight be that the ensuing host response selectively feedsthe respective enteric pathogens

In summary manipulation of small Rho GTPases bybacterial virulence factors is a common theme in microbialpathogenesis (Box 1) and detection of these pathogen-induced processes by the innate immune system enablesthe host to distinguish pathogens from microbes with lowerpathogenic potential From an evolutionary point of view itis also interesting to note that detection of bacterial effec-tor proteins is a feature of the innate immune system thatis conserved from plants to mammals This observationraises the question whether signaling pathways involvedin detecting these patterns of pathogenesis are also con-served between the different phyla

Evolution of the NOD1 signaling pathwayNOD1 and NOD2 of mammals are thought to have evolvedindependently from plant NLRs suggesting that function-al similarities and the presence of similar protein domains(ie the presence of similar C-terminal leucine-richrepeats and similar central nucleotide-binding oligomeri-zation motifs) are features that developed independently indifferent lineages Furthermore the Drosophila melano-gaster genome does not encode homologs of the mammalianNOD1 or NOD2 proteins (reviewed in [9192]) Insteaddiaminopimelic acid-type peptidoglycan from Gram-nega-tive bacteria is detected in D melanogaster through theimmune deficiency (IMD) pathway which shares homologyto the tumor necrosis factor (TNF)-a signaling pathway inmammals [93] In the IMD pathway peptidoglycan isdetected by the transmembrane receptor peptidoglycan-recognition protein (PGRP)-LC [94] or the cytoplasmicreceptor PGRP-LE [95] Upon binding of peptidoglycanPGRP-LC and PGRP-LE activate IMD a death domainprotein with homology to RIP1 the RIP kinase associatedwith TNF-a-dependent NF-kB activation [96] In turnIMD activates the transcription factor Relish which is amember of the NF-kB family [97]

Interestingly recent studies raise the possibility thatthe IMD and NOD1 signaling pathways represent evolu-tionary conserved signaling cascades for the detection of

diaminopimelic acid-type peptidoglycan (reviewed in [98])First the E coli CNF-1 toxin constitutively activatesRAC2 in Drosophila cells thereby inducing the IMD path-way [43] and diaminopimelic acid-type peptidoglycan acti-vates the NOD1-signalling pathway in human cellsthrough a RAC1-dependent mechanism [40] Thus a re-quirement for small Rho GTPases is a feature sharedbetween the IMD and NOD1 pathways but absent fromthe TNF-a signaling pathway Second human RAC2induces NF-kB activation through RIP1 and RIP2 [43]These data suggest that the IMD homolog RIP1 is not onlyinvolved in TNF-a signaling but also participates indetecting the activation state of small Rho GTPases whichconfirms the similarities between the IMD and NOD1signaling pathways There are however some notable dif-ferences between the IMD and NOD1 pathways includingthe absence of a NOD1 homolog in insects and the fact thatmammalian PGRPs do not function in the NOD1 signalingpathway [99]

In summary recent evidence provides some support forthe idea that the signaling pathways detecting diamino-pimelic acid-type peptidoglycan in mammals and insectsshare a common ancestry (reviewed in [98]) This observa-tion along with the finding that the Drosophila Toll proteinand the homologous mammalian TLRs both function ascellular sensors of microbes highlights the conservation ofinnate immune surveillance mechanism within the animalkingdom

Concluding remarksThe picture emerging from these studies is that NODproteins provide epithelial cells with important sentinelfunctions for detecting pathogen-induced violations of theintegrity of the host cell cytoplasm Many enteric patho-gens produce virulence factors that manipulate the activityof small Rho GTPases to mediate attachment or entry or toinhibit phagocytosis (Figure 1 and Box 1) As a result thehost can detect the presence of pathogens by monitoringthe activation state of small Rho GTPases The down-stream signaling pathways enable the intestinal epitheli-um to mount responses that are appropriate to the threatincluding NF-kB activation activation of the autophagypathway and the release of antimicrobial peptides Theability of the epithelium to react appropriately is impor-tant for balancing host responses against microbial com-munities in the gastrointestinal tract When thesemechanisms for maintaining immune homeostasis aredisrupted by mutations that impair NOD2 signaling orthe autophagy pathway the host has an increasing risk ofdeveloping intestinal inflammation

Direct evidence for the binding of NOD1 to peptidogly-can is lacking therefore it has been speculated that thisprotein might function in signal transduction rather thanserving as an innate immune receptor for peptidoglycan[100] Interestingly NOD1-dependent NF-kB activationelicited by diaminopimelic acid-type peptidoglycanrequires the presence of active RAC1 [40] thereby raisingthe possibility that peptidoglycan is sensed in mammalsby an innate immune receptor acting upstream of thissmall Rho GTPase (Figure 1) which represents an excitingarea for future research

127

Review Trends in Immunology March 2014 Vol 35 No 3

AcknowledgmentsWork in AJBrsquos laboratory is supported by Public Health Service GrantsAI044170 and AI076246 AMK is supported by the American HeartAssociation Grant 12SDG12220022

Appendix A Supplementary dataSupplementary data associated with this article can befound in the online version at httpdxdoiorg101016jit201310009

References1 Gewirtz AT et al (2001) Cutting edge bacterial flagellin activates

basolaterally expressed TLR5 to induce epithelial proinflammatorygene expression J Immunol 167 1882ndash1885

2 Weber B et al (2009) Intestinal macrophages differentiation andinvolvement in intestinal immunopathologies Semin Immunopathol31 171ndash184

3 Vance RE et al (2009) Patterns of pathogenesis discrimination ofpathogenic and nonpathogenic microbes by the innate immunesystem Cell Host Microbe 6 10ndash21

4 Biswas A and Kobayashi KS (2013) Regulation of intestinalmicrobiota by the NLR protein family Int Immunol 25 207ndash214

5 Kim JG et al (2004) Nod1 is an essential signal transducer inintestinal epithelial cells infected with bacteria that avoidrecognition by toll-like receptors Infect Immun 72 1487ndash1495

6 Chamaillard M et al (2004) Battling enteroinvasive bacteria Nod1comes to the rescue Trends Microbiol 12 529ndash532

7 Girardin SE et al (2001) CARD4Nod1 mediates NF-kappaB andJNK activation by invasive Shigella flexneri EMBO Rep 2 736ndash742

8 Zilbauer M et al (2007) A major role for intestinal epithelialnucleotide oligomerization domain 1 (NOD1) in eliciting hostbactericidal immune responses to Campylobacter jejuni CellMicrobiol 9 2404ndash2416

9 Viala J et al (2004) Nod1 responds to peptidoglycan delivered by theHelicobacter pylori cag pathogenicity island Nat Immunol 5 1166ndash1174

10 Allison CC et al (2009) Helicobacter pylori induces MAPKphosphorylation and AP-1 activation via a NOD1-dependentmechanism J Immunol 183 8099ndash8109

11 Geddes K et al (2010) Nod1 and Nod2 regulation of inflammation inthe Salmonella colitis model Infect Immun 78 5107ndash5115

12 Keestra AM et al (2011) A Salmonella virulence factor activates theNOD1NOD2 signaling pathway MBio 2 e00266ndash11

13 Travassos LH et al (2010) Nod1 and Nod2 direct autophagy byrecruiting ATG16L1 to the plasma membrane at the site of bacterialentry Nat Immunol 11 55ndash62

14 Ogura Y et al (2001) Nod2 a Nod1Apaf-1 family member that isrestricted to monocytes and activates NF-kappaB J Biol Chem 2764812ndash4818

15 Kobayashi KS et al (2005) Nod2-dependent regulation of innate andadaptive immunity in the intestinal tract Science 307 731ndash734

16 Hampe J et al (2001) Association between insertion mutation inNOD2 gene and Crohnrsquos disease in German and British populationsLancet 357 1925ndash1928

17 Wehkamp J et al (2004) NOD2 (CARD15) mutations in Crohnrsquosdisease are associated with diminished mucosal alpha-defensinexpression Gut 53 1658ndash1664

18 Salzman NH et al (2003) Protection against enteric salmonellosis intransgenic mice expressing a human intestinal defensin Nature 422522ndash526

19 Chu H et al (2012) Human alpha-defensin 6 promotes mucosalinnate immunity through self-assembled peptide nanonets Science337 477ndash481

20 Biswas A et al (2010) Induction and rescue of Nod2-dependent Th1-driven granulomatous inflammation of the ileum Proc Natl AcadSci USA 107 14739ndash14744

21 Girardin SE et al (2003) Nod1 detects a unique muropeptide fromgram-negative bacterial peptidoglycan Science 300 1584ndash1587

22 Chamaillard M et al (2003) An essential role for NOD1 in hostrecognition of bacterial peptidoglycan containing diaminopimelicacid Nat Immunol 4 702ndash707

128

23 Inohara N et al (2003) Host recognition of bacterial muramyldipeptide mediated through NOD2 Implications for Crohnrsquosdisease J Biol Chem 278 5509ndash5512

24 Girardin SE et al (2003) Nod2 is a general sensor of peptidoglycanthrough muramyl dipeptide (MDP) detection J Biol Chem 2788869ndash8872

25 Tattoli I et al (2007) The nodosome Nod1 and Nod2 controlbacterial infections and inflammation Semin Immunopathol 29289ndash301

26 Rosenstiel P et al (2006) A short isoform of NOD2CARD15 NOD2-S is an endogenous inhibitor of NOD2receptor-interacting proteinkinase 2-induced signaling pathways Proc Natl Acad Sci USA103 3280ndash3285

27 Inohara N et al (1999) Nod1 an Apaf-1-like activator of caspase-9and nuclear factor-kappaB J Biol Chem 274 14560ndash14567

28 Park JH et al (2007) RICKRIP2 mediates innate immuneresponses induced through Nod1 and Nod2 but not TLRs JImmunol 178 2380ndash2386

29 Grubman A et al (2010) The innate immune molecule NOD1regulates direct killing of Helicobacter pylori by antimicrobialpeptides Cell Microbiol 12 626ndash639

30 Yeretssian G et al (2011) Non-apoptotic role of BID in inflammationand innate immunity Nature 474 96ndash99

31 Kufer TA et al (2008) The pattern-recognition molecule Nod1 islocalized at the plasma membrane at sites of bacterial interactionCell Microbiol 10 477ndash486

32 Barnich N et al (2005) Membrane recruitment of NOD2 in intestinalepithelial cells is essential for nuclear factor-kappaB activation inmuramyl dipeptide recognition J Cell Biol 170 21ndash26

33 Lecine P et al (2007) The NOD2-RICK complex signals from theplasma membrane J Biol Chem 282 15197ndash15207

34 Abbott DW et al (2004) The Crohnrsquos disease protein NOD2requires RIP2 in order to induce ubiquitinylation of a novel site onNEMO Curr Biol 14 2217ndash2227

35 Hasegawa M et al (2008) A critical role of RICKRIP2polyubiquitination in Nod-induced NF-kappaB activation EMBO J27 373ndash383

36 da Silva Correia J et al (2007) SGT1 is essential for Nod1 activationProc Natl Acad Sci USA 104 6764ndash6769

37 Mayor A et al (2007) A crucial function of SGT1 and HSP90 ininflammasome activity links mammalian and plant innate immuneresponses Nat Immunol 8 497ndash503

38 Lipinski S et al (2012) RNAi screening identifies mediators of NOD2signaling implications for spatial specificity of MDP recognitionProc Natl Acad Sci USA 109 21426ndash21431

39 Warner N et al (2013) A genome-wide siRNA screen reveals positiveand negative regulators of the NOD2 and NF-kappaB signalingpathways Sci Signal 6 rs3

40 Keestra AM et al (2013) Manipulation of small Rho GTPases is apathogen-induced process detected by NOD1 Nature 496 233ndash237

41 Narumiya S (1996) The small GTPase Rho cellular functions andsignal transduction J Biochem 120 215ndash228

42 Perona R et al (1997) Activation of the nuclear factor-kappaB byRho CDC42 and Rac-1 proteins Genes Dev 11 463ndash475

43 Boyer L et al (2011) Pathogen-derived effectors trigger protectiveimmunity via activation of the Rac2 enzyme and the IMD or Ripkinase signaling pathway Immunity 35 536ndash549

44 Legrand-Poels S et al (2007) Modulation of Nod2-dependentNF-kappaB signaling by the actin cytoskeleton J Cell Sci 1201299ndash1310

45 Zhao Y et al (2012) Control of NOD2 and Rip2-dependent innateimmune activation by GEF-H1 Inflamm Bowel Dis 18 603ndash612

46 Thao NP et al (2007) RAR1 and HSP90 form a complex with RacRop GTPase and function in innate-immune responses in rice PlantCell 19 4035ndash4045

47 Chen L et al (2010) The HopSti1-Hsp90 chaperone complexfacilitates the maturation and transport of a PAMP receptor in riceinnate immunity Cell Host Microbe 7 185ndash196

48 Hahn JS (2005) Regulation of Nod1 by Hsp90 chaperone complexFEBS Lett 579 4513ndash4519

49 Aktories K et al (2000) Rho GTPases as targets of bacterial proteintoxins Biol Chem 381 421ndash426

Review Trends in Immunology March 2014 Vol 35 No 3

50 Huang Z et al (2009) Structural insights into host GTPase isoformselection by a family of bacterial GEF mimics Nat Struct Mol Biol16 853ndash860

51 Bulgin RR et al (2009) EspT triggers formation of lamellipodia andmembrane ruffles through activation of Rac-1 and Cdc42 CellMicrobiol 11 217ndash229

52 Hardt WD et al (1998) S typhimurium encodes an activator of RhoGTPases that induces membrane ruffling and nuclear responses inhost cells Cell 93 815ndash826

53 Friebel A et al (2001) SopE and SopE2 from Salmonellatyphimurium activate different sets of RhoGTPases of the host cellJ Biol Chem 276 34035ndash34040

54 Arbeloa A et al (2010) EspM2 is a RhoA guanine nucleotide exchangefactor Cell Microbiol 12 654ndash664

55 Fukazawa A et al (2008) GEF-H1 mediated control of NOD1dependent NF-kappaB activation by Shigella effectors PLoSPathog 4 e1000228

56 Norris FA et al (1998) SopB a protein required for virulence ofSalmonella dublin is an inositol phosphate phosphatase Proc NatlAcad Sci USA 95 14057ndash14059

57 Zhou D et al (2001) A Salmonella inositol polyphosphatase acts inconjunction with other bacterial effectors to promote host cell actincytoskeleton rearrangements and bacterial internalization MolMicrobiol 39 248ndash259

58 Krause-Gruszczynska M et al (2011) The signaling pathway ofCampylobacter jejuni-induced Cdc42 activation role of fibronectinintegrin beta1 tyrosine kinases and guanine exchange factor Vav2Cell Commun Signal 9 32

59 Schmidt G et al (1997) Gln 63 of Rho is deamidated by Escherichiacoli cytotoxic necrotizing factor-1 Nature 387 725ndash729

60 Flatau G et al (1997) Toxin-induced activation of the G protein p21Rho by deamidation of glutamine Nature 387 729ndash733

61 Lerm M et al (1999) Deamidation of Cdc42 and Rac by Escherichiacoli cytotoxic necrotizing factor 1 activation of c-Jun N-terminalkinase in HeLa cells Infect Immun 67 496ndash503

62 Konkel ME et al (1999) Identification of proteins required for theinternalization of Campylobacter jejuni into cultured mammaliancells Adv Exp Med Biol 473 215ndash224

63 Rivera-Amill V and Konkel ME (1999) Secretion of Campylobacterjejuni Cia proteins is contact dependent Adv Exp Med Biol 473225ndash229

64 Malik-Kale P et al (2008) Culture of Campylobacter jejuni withsodium deoxycholate induces virulence gene expression JBacteriol 190 2286ndash2297

65 Konkel ME et al (2004) Secretion of virulence proteins fromCampylobacter jejuni is dependent on a functional flagellar exportapparatus J Bacteriol 186 3296ndash3303

66 Neal-McKinney JM and Konkel ME (2012) The Campylobacterjejuni CiaC virulence protein is secreted from the flagellum anddelivered to the cytosol of host cells Front Cell Infect Microbiol2 31

67 Eucker TP and Konkel ME (2012) The cooperative action ofbacterial fibronectin-binding proteins and secreted proteinspromote maximal Campylobacter jejuni invasion of host cells bystimulating membrane ruffling Cell Microbiol 14 226ndash238

68 Boehm M et al (2011) Major host factors involved in epithelial cellinvasion of Campylobacter jejuni role of fibronectin integrin beta1FAK Tiam-1 and DOCK180 in activating Rho GTPase Rac1 FrontCell Infect Microbiol 1 17

69 Chen LM et al (1996) Requirement of CDC42 for Salmonella-induced cytoskeletal and nuclear responses Science 274 2115ndash2118

70 Hobbie S et al (1997) Involvement of mitogen-activated proteinkinase pathways in the nuclear responses and cytokine productioninduced by Salmonella typhimurium in cultured intestinal epithelialcells J Immunol 159 5550ndash5559

71 Savkovic SD et al (1997) Activation of NF-kappaB in intestinalepithelial cells by enteropathogenic Escherichia coli Am J Physiol273 C1160ndashC1167

72 Zurawski DV et al (2008) The NleEOspZ family of effector proteinsis required for polymorphonuclear transepithelial migration acharacteristic shared by enteropathogenic Escherichia coli andShigella flexneri infections Infect Immun 76 369ndash379

73 Figueiredo JF et al (2009) Salmonella enterica Typhimurium SipAinduces CXC-chemokine expression through p38MAPK and JUNpathways Microbes Infect 11 302ndash310

74 Raymond B et al (2011) The WxxxE effector EspT triggersexpression of immune mediators in an ErkJNK and NF-kappaB-dependent manner Cell Microbiol 13 1881ndash1893

75 Schlumberger MC et al (2003) Amino acids of the bacterial toxinSopE involved in G nucleotide exchange on Cdc42 J Biol Chem 27827149ndash27159

76 Hoffmann C et al (2010) In macrophages caspase-1 activation bySopE and the type III secretion system-1 of S typhimurium canproceed in the absence of flagellin PLoS ONE 5 e12477

77 Muller AJ et al (2009) The S Typhimurium effector SopE inducescaspase-1 activation in stromal cells to initiate gut inflammation CellHost Microbe 6 125ndash136

78 Yoo NJ et al (2002) Nod1 a CARD protein enhances pro-interleukin-1beta processing through the interaction with pro-caspase-1 Biochem Biophys Res Commun 299 652ndash658

79 Haglund CM and Welch MD (2011) Pathogens and polymersmicrobe-host interactions illuminate the cytoskeleton J Cell Biol195 7ndash17

80 Patel JC and Galan JE (2005) Manipulation of the host actincytoskeleton by Salmonella ndash all in the name of entry Curr OpinMicrobiol 8 10ndash15

81 Celli J et al (2000) Enteropathogenic Escherichia coli (EPEC)attachment to epithelial cells exploiting the host cell cytoskeletonfrom the outside Cell Microbiol 2 1ndash9

82 Boquet P and Lemichez E (2003) Bacterial virulence factorstargeting Rho GTPases parasitism or symbiosis Trends Cell Biol13 238ndash246

83 Jones JD and Dangl JL (2006) The plant immune system Nature444 323ndash329

84 Stuart LM et al (2013) Effector-triggered versus pattern-triggeredimmunity how animals sense pathogens Nat Rev Immunol 13199ndash206

85 Stecher B et al (2007) Salmonella enterica serovar typhimuriumexploits inflammation to compete with the intestinal microbiotaPLoS Biol 5 2177ndash2189

86 Lupp C et al (2007) Host-mediated inflammation disrupts theintestinal microbiota and promotes the overgrowth ofEnterobacteriaceae Cell Host Microbe 2 119ndash129

87 Winter SE et al (2013) Host-derived nitrate boosts growth of E coliin the inflamed gut Science 339 708ndash711

88 Lopez CA et al (2012) Phage-mediated acquisition of a type IIIsecreted effector protein boosts growth of salmonella by nitraterespiration MBio 3 e00143-12

89 Winter SE et al (2010) Gut inflammation provides a respiratoryelectron acceptor for Salmonella Nature 467 426ndash429

90 Lawley TD et al (2008) Host transmission of Salmonella entericaserovar Typhimurium is controlled by virulence factors andindigenous intestinal microbiota Infect Immun 76 403ndash416

91 Bonardi V et al (2012) A new eye on NLR proteins focused on clarityor diffused by complexity Curr Opin Immunol 24 41ndash50

92 Staskawicz BJ et al (2001) Common and contrasting themes ofplant and animal diseases Science 292 2285ndash2289

93 Pinheiro VB and Ellar DJ (2006) How to kill a mocking bug CellMicrobiol 8 545ndash557

94 Choe KM et al (2002) Requirement for a peptidoglycan recognitionprotein (PGRP) in Relish activation and antibacterial immuneresponses in Drosophila Science 296 359ndash362

95 Takehana A et al (2002) Overexpression of a pattern-recognitionreceptor peptidoglycan-recognition protein-LE activates imdrelish-mediated antibacterial defense and the prophenoloxidase cascade inDrosophila larvae Proc Natl Acad Sci USA 99 13705ndash13710

96 Georgel P et al (2001) Drosophila immune deficiency (IMD) is adeath domain protein that activates antibacterial defense and canpromote apoptosis Dev Cell 1 503ndash514

97 Dushay MS et al (1996) Origins of immunity relish a compoundRel-like gene in the antibacterial defense of Drosophila Proc NatlAcad Sci USA 93 10343ndash10347

98 Stuart LM and Boyer L (2013) RhoGTPases ndash NODes for effector-triggered immunity in animals Cell Res 23 980ndash981

129

Review Trends in Immunology March 2014 Vol 35 No 3

99 Dziarski R and Gupta D (2010) Review mammalian peptidoglycanrecognition proteins (PGRPs) in innate immunity Innate Immun 16168ndash174

100 Murray PJ (2005) NOD proteins an intracellular pathogen-recognition system or signal transduction modifiers Curr OpinImmunol 17 352ndash358

101 Just I et al (1995) Glucosylation of Rho proteins by Clostridiumdifficile toxin B Nature 375 500ndash503

102 Ohguchi K et al (1996) Effects of Clostridium difficile toxin A andtoxin B on phospholipase D activation in human promyelocyticleukemic HL60 cells Infect Immun 64 4433ndash4437

103 Goehring UM et al (1999) The N-terminal domain of Pseudomonasaeruginosa exoenzyme S is a GTPase-activating protein for RhoGTPases J Biol Chem 274 36369ndash36372

104 Black DS and Bliska JB (2000) The RhoGAP activity of theYersinia pseudotuberculosis cytotoxin YopE is required forantiphagocytic function and virulence Mol Microbiol 37 515ndash527

130

105 Von Pawel-Rammingen U et al (2000) GAP activity of the YersiniaYopE cytotoxin specifically targets the Rho pathway a mechanism fordisruption of actin microfilament structure Mol Microbiol 36 737ndash748

106 Fu Y and Galan JE (1999) A salmonella protein antagonizes Rac-1and Cdc42 to mediate host-cell recovery after bacterial invasionNature 401 293ndash297

107 Joneson T et al (1996) RAC regulation of actin polymerization andproliferation by a pathway distinct from Jun kinase Science 2741374ndash1376

108 Bhavsar AP et al (2013) The Salmonella type III effector SspH2specifically exploits the NLR co-chaperone activity of SGT1 to subvertimmunity PLoS Pathog 9 e1003518

109 Baruch K et al (2011) Metalloprotease type III effectors thatspecifically cleave JNK and NF-kappaB EMBO J 30 221ndash231

110 Yen H et al (2010) NleC a type III secretion protease compromises NF-kappaB activation by targeting p65RelA PLoS Pathog 6 e1001231

  • Detection of enteric pathogens by the nodosome
    • Distinguishing friend from foe in the gut
    • NOD proteins in pathogen detection and maintenance of gut immune homeostasis
    • Formation of the nodosome
    • Detection of bacterial virulence factors by the nodosome
    • Evolution of the NOD1 signaling pathway
    • Concluding remarks
    • Acknowledgments
    • Supplementary data
      • References

Intesnal lumenCadF

Fn

Integrinβ1

IpgB2

OspB

GEF-H1

EspM2 SopB Map IpgB1 Pepdo-glycan

RHOA

GDP

PI3-kinase

CDC42

SopE2 EspT

SopERAC1

FAK

DOCK180

TIAM-1

RHOA CDC42 RAC1

HSP90NOD1

RIP1RIP2

NEMOSGT1

SspH2

Ikk

IκB NF-κB

JNK ERK12

NF-κB AP-1

Epithelialcell Nucleus

Proinflammatorygene expression

GDP

GTP GTPCNF1

GTP

GDP GDP GDP

Nodosome

PIP

VAV2

GTP GTP GTP

GDP GDPGDP

TRENDS in Immunology

Figure 1 Model for activation of the Nucleotide-binding oligomerization domain protein (NOD)1 nodosome in epithelial cells by diaminopimelic acid-type peptidoglycan or

bacterial virulence factors which requires excessive or prolonged activation of small Rho GTPases Peptidoglycan (blue box) or bacterial virulence factors (blue circles)

engage host proteins (red circles) to activate (arrows) the nodosome thereby inducing the expression of proinflammatory genes AP-1 activator protein-1 CDC42 cell

division control protein 42 homolog CNF1 cytotoxic necrotizing factor 1 DOCK dedicator of cytokinesis ERK extracellular signal-regulated kinase FAK focal adhesion

kinase Fn fibronectin GEF guanosine nucleotide-exchange factor HSP90 heat shock protein 90 IkB nuclear factor of kappa light polypeptide gene enhancer in B cells

inhibitor Ikk I kB kinase JNK C-Jun N-terminal kinase NEMO NF-kB essential modulator NF-kB nuclear factor-kB PI3 phosphoinositide 3 PIP phosphatidylinositol

phosphate RAC1 Ras-related C3 botulinum toxin substrate 1 RHOA Ras homolog gene family member A RIP receptor-interacting protein SGT1 suppressor of G-two

allele of Skp1 SspH2 Salmonella secreted protein H2 TIAM-1 T cell lymphoma invasion and metastasis-1

Review Trends in Immunology March 2014 Vol 35 No 3

126

Review Trends in Immunology March 2014 Vol 35 No 3

they benefit from the ensuing inflammatory host responseThis viewpoint is supported by recent data suggesting thatintestinal inflammation confers a fitness advantage uponS Typhimurium E coli and C rodentium during theircompetition with the obligate anaerobic microbial commu-nity that dominates the healthy gut [85ndash87] A bloom of STyphimurium and E coli in the inflamed gut is supportedby host-derived electron acceptors which are generated asbyproducts of the inflammatory host response [87ndash89]Interestingly the SopE protein which is present in onlya subset of S Typhimurium isolates alters host responsesby increasing expression of inducible NO synthase (iNOS)an enzyme that produces NO Conversion of NO to nitrateincreases growth of SopE-producing S Typhimuriumstrains in the intestinal lumen through nitrate respiration[88] Enhanced growth of S Typhimurium in the intestinallumen increases transmission of the pathogen [90] whichrepresents a potent selective force for the evolution ofenteric pathogens In other words the reason for deployingvirulence factors that trigger the NOD1 signaling pathwaymight be that the ensuing host response selectively feedsthe respective enteric pathogens

In summary manipulation of small Rho GTPases bybacterial virulence factors is a common theme in microbialpathogenesis (Box 1) and detection of these pathogen-induced processes by the innate immune system enablesthe host to distinguish pathogens from microbes with lowerpathogenic potential From an evolutionary point of view itis also interesting to note that detection of bacterial effec-tor proteins is a feature of the innate immune system thatis conserved from plants to mammals This observationraises the question whether signaling pathways involvedin detecting these patterns of pathogenesis are also con-served between the different phyla

Evolution of the NOD1 signaling pathwayNOD1 and NOD2 of mammals are thought to have evolvedindependently from plant NLRs suggesting that function-al similarities and the presence of similar protein domains(ie the presence of similar C-terminal leucine-richrepeats and similar central nucleotide-binding oligomeri-zation motifs) are features that developed independently indifferent lineages Furthermore the Drosophila melano-gaster genome does not encode homologs of the mammalianNOD1 or NOD2 proteins (reviewed in [9192]) Insteaddiaminopimelic acid-type peptidoglycan from Gram-nega-tive bacteria is detected in D melanogaster through theimmune deficiency (IMD) pathway which shares homologyto the tumor necrosis factor (TNF)-a signaling pathway inmammals [93] In the IMD pathway peptidoglycan isdetected by the transmembrane receptor peptidoglycan-recognition protein (PGRP)-LC [94] or the cytoplasmicreceptor PGRP-LE [95] Upon binding of peptidoglycanPGRP-LC and PGRP-LE activate IMD a death domainprotein with homology to RIP1 the RIP kinase associatedwith TNF-a-dependent NF-kB activation [96] In turnIMD activates the transcription factor Relish which is amember of the NF-kB family [97]

Interestingly recent studies raise the possibility thatthe IMD and NOD1 signaling pathways represent evolu-tionary conserved signaling cascades for the detection of

diaminopimelic acid-type peptidoglycan (reviewed in [98])First the E coli CNF-1 toxin constitutively activatesRAC2 in Drosophila cells thereby inducing the IMD path-way [43] and diaminopimelic acid-type peptidoglycan acti-vates the NOD1-signalling pathway in human cellsthrough a RAC1-dependent mechanism [40] Thus a re-quirement for small Rho GTPases is a feature sharedbetween the IMD and NOD1 pathways but absent fromthe TNF-a signaling pathway Second human RAC2induces NF-kB activation through RIP1 and RIP2 [43]These data suggest that the IMD homolog RIP1 is not onlyinvolved in TNF-a signaling but also participates indetecting the activation state of small Rho GTPases whichconfirms the similarities between the IMD and NOD1signaling pathways There are however some notable dif-ferences between the IMD and NOD1 pathways includingthe absence of a NOD1 homolog in insects and the fact thatmammalian PGRPs do not function in the NOD1 signalingpathway [99]

In summary recent evidence provides some support forthe idea that the signaling pathways detecting diamino-pimelic acid-type peptidoglycan in mammals and insectsshare a common ancestry (reviewed in [98]) This observa-tion along with the finding that the Drosophila Toll proteinand the homologous mammalian TLRs both function ascellular sensors of microbes highlights the conservation ofinnate immune surveillance mechanism within the animalkingdom

Concluding remarksThe picture emerging from these studies is that NODproteins provide epithelial cells with important sentinelfunctions for detecting pathogen-induced violations of theintegrity of the host cell cytoplasm Many enteric patho-gens produce virulence factors that manipulate the activityof small Rho GTPases to mediate attachment or entry or toinhibit phagocytosis (Figure 1 and Box 1) As a result thehost can detect the presence of pathogens by monitoringthe activation state of small Rho GTPases The down-stream signaling pathways enable the intestinal epitheli-um to mount responses that are appropriate to the threatincluding NF-kB activation activation of the autophagypathway and the release of antimicrobial peptides Theability of the epithelium to react appropriately is impor-tant for balancing host responses against microbial com-munities in the gastrointestinal tract When thesemechanisms for maintaining immune homeostasis aredisrupted by mutations that impair NOD2 signaling orthe autophagy pathway the host has an increasing risk ofdeveloping intestinal inflammation

Direct evidence for the binding of NOD1 to peptidogly-can is lacking therefore it has been speculated that thisprotein might function in signal transduction rather thanserving as an innate immune receptor for peptidoglycan[100] Interestingly NOD1-dependent NF-kB activationelicited by diaminopimelic acid-type peptidoglycanrequires the presence of active RAC1 [40] thereby raisingthe possibility that peptidoglycan is sensed in mammalsby an innate immune receptor acting upstream of thissmall Rho GTPase (Figure 1) which represents an excitingarea for future research

127

Review Trends in Immunology March 2014 Vol 35 No 3

AcknowledgmentsWork in AJBrsquos laboratory is supported by Public Health Service GrantsAI044170 and AI076246 AMK is supported by the American HeartAssociation Grant 12SDG12220022

Appendix A Supplementary dataSupplementary data associated with this article can befound in the online version at httpdxdoiorg101016jit201310009

References1 Gewirtz AT et al (2001) Cutting edge bacterial flagellin activates

basolaterally expressed TLR5 to induce epithelial proinflammatorygene expression J Immunol 167 1882ndash1885

2 Weber B et al (2009) Intestinal macrophages differentiation andinvolvement in intestinal immunopathologies Semin Immunopathol31 171ndash184

3 Vance RE et al (2009) Patterns of pathogenesis discrimination ofpathogenic and nonpathogenic microbes by the innate immunesystem Cell Host Microbe 6 10ndash21

4 Biswas A and Kobayashi KS (2013) Regulation of intestinalmicrobiota by the NLR protein family Int Immunol 25 207ndash214

5 Kim JG et al (2004) Nod1 is an essential signal transducer inintestinal epithelial cells infected with bacteria that avoidrecognition by toll-like receptors Infect Immun 72 1487ndash1495

6 Chamaillard M et al (2004) Battling enteroinvasive bacteria Nod1comes to the rescue Trends Microbiol 12 529ndash532

7 Girardin SE et al (2001) CARD4Nod1 mediates NF-kappaB andJNK activation by invasive Shigella flexneri EMBO Rep 2 736ndash742

8 Zilbauer M et al (2007) A major role for intestinal epithelialnucleotide oligomerization domain 1 (NOD1) in eliciting hostbactericidal immune responses to Campylobacter jejuni CellMicrobiol 9 2404ndash2416

9 Viala J et al (2004) Nod1 responds to peptidoglycan delivered by theHelicobacter pylori cag pathogenicity island Nat Immunol 5 1166ndash1174

10 Allison CC et al (2009) Helicobacter pylori induces MAPKphosphorylation and AP-1 activation via a NOD1-dependentmechanism J Immunol 183 8099ndash8109

11 Geddes K et al (2010) Nod1 and Nod2 regulation of inflammation inthe Salmonella colitis model Infect Immun 78 5107ndash5115

12 Keestra AM et al (2011) A Salmonella virulence factor activates theNOD1NOD2 signaling pathway MBio 2 e00266ndash11

13 Travassos LH et al (2010) Nod1 and Nod2 direct autophagy byrecruiting ATG16L1 to the plasma membrane at the site of bacterialentry Nat Immunol 11 55ndash62

14 Ogura Y et al (2001) Nod2 a Nod1Apaf-1 family member that isrestricted to monocytes and activates NF-kappaB J Biol Chem 2764812ndash4818

15 Kobayashi KS et al (2005) Nod2-dependent regulation of innate andadaptive immunity in the intestinal tract Science 307 731ndash734

16 Hampe J et al (2001) Association between insertion mutation inNOD2 gene and Crohnrsquos disease in German and British populationsLancet 357 1925ndash1928

17 Wehkamp J et al (2004) NOD2 (CARD15) mutations in Crohnrsquosdisease are associated with diminished mucosal alpha-defensinexpression Gut 53 1658ndash1664

18 Salzman NH et al (2003) Protection against enteric salmonellosis intransgenic mice expressing a human intestinal defensin Nature 422522ndash526

19 Chu H et al (2012) Human alpha-defensin 6 promotes mucosalinnate immunity through self-assembled peptide nanonets Science337 477ndash481

20 Biswas A et al (2010) Induction and rescue of Nod2-dependent Th1-driven granulomatous inflammation of the ileum Proc Natl AcadSci USA 107 14739ndash14744

21 Girardin SE et al (2003) Nod1 detects a unique muropeptide fromgram-negative bacterial peptidoglycan Science 300 1584ndash1587

22 Chamaillard M et al (2003) An essential role for NOD1 in hostrecognition of bacterial peptidoglycan containing diaminopimelicacid Nat Immunol 4 702ndash707

128

23 Inohara N et al (2003) Host recognition of bacterial muramyldipeptide mediated through NOD2 Implications for Crohnrsquosdisease J Biol Chem 278 5509ndash5512

24 Girardin SE et al (2003) Nod2 is a general sensor of peptidoglycanthrough muramyl dipeptide (MDP) detection J Biol Chem 2788869ndash8872

25 Tattoli I et al (2007) The nodosome Nod1 and Nod2 controlbacterial infections and inflammation Semin Immunopathol 29289ndash301

26 Rosenstiel P et al (2006) A short isoform of NOD2CARD15 NOD2-S is an endogenous inhibitor of NOD2receptor-interacting proteinkinase 2-induced signaling pathways Proc Natl Acad Sci USA103 3280ndash3285

27 Inohara N et al (1999) Nod1 an Apaf-1-like activator of caspase-9and nuclear factor-kappaB J Biol Chem 274 14560ndash14567

28 Park JH et al (2007) RICKRIP2 mediates innate immuneresponses induced through Nod1 and Nod2 but not TLRs JImmunol 178 2380ndash2386

29 Grubman A et al (2010) The innate immune molecule NOD1regulates direct killing of Helicobacter pylori by antimicrobialpeptides Cell Microbiol 12 626ndash639

30 Yeretssian G et al (2011) Non-apoptotic role of BID in inflammationand innate immunity Nature 474 96ndash99

31 Kufer TA et al (2008) The pattern-recognition molecule Nod1 islocalized at the plasma membrane at sites of bacterial interactionCell Microbiol 10 477ndash486

32 Barnich N et al (2005) Membrane recruitment of NOD2 in intestinalepithelial cells is essential for nuclear factor-kappaB activation inmuramyl dipeptide recognition J Cell Biol 170 21ndash26

33 Lecine P et al (2007) The NOD2-RICK complex signals from theplasma membrane J Biol Chem 282 15197ndash15207

34 Abbott DW et al (2004) The Crohnrsquos disease protein NOD2requires RIP2 in order to induce ubiquitinylation of a novel site onNEMO Curr Biol 14 2217ndash2227

35 Hasegawa M et al (2008) A critical role of RICKRIP2polyubiquitination in Nod-induced NF-kappaB activation EMBO J27 373ndash383

36 da Silva Correia J et al (2007) SGT1 is essential for Nod1 activationProc Natl Acad Sci USA 104 6764ndash6769

37 Mayor A et al (2007) A crucial function of SGT1 and HSP90 ininflammasome activity links mammalian and plant innate immuneresponses Nat Immunol 8 497ndash503

38 Lipinski S et al (2012) RNAi screening identifies mediators of NOD2signaling implications for spatial specificity of MDP recognitionProc Natl Acad Sci USA 109 21426ndash21431

39 Warner N et al (2013) A genome-wide siRNA screen reveals positiveand negative regulators of the NOD2 and NF-kappaB signalingpathways Sci Signal 6 rs3

40 Keestra AM et al (2013) Manipulation of small Rho GTPases is apathogen-induced process detected by NOD1 Nature 496 233ndash237

41 Narumiya S (1996) The small GTPase Rho cellular functions andsignal transduction J Biochem 120 215ndash228

42 Perona R et al (1997) Activation of the nuclear factor-kappaB byRho CDC42 and Rac-1 proteins Genes Dev 11 463ndash475

43 Boyer L et al (2011) Pathogen-derived effectors trigger protectiveimmunity via activation of the Rac2 enzyme and the IMD or Ripkinase signaling pathway Immunity 35 536ndash549

44 Legrand-Poels S et al (2007) Modulation of Nod2-dependentNF-kappaB signaling by the actin cytoskeleton J Cell Sci 1201299ndash1310

45 Zhao Y et al (2012) Control of NOD2 and Rip2-dependent innateimmune activation by GEF-H1 Inflamm Bowel Dis 18 603ndash612

46 Thao NP et al (2007) RAR1 and HSP90 form a complex with RacRop GTPase and function in innate-immune responses in rice PlantCell 19 4035ndash4045

47 Chen L et al (2010) The HopSti1-Hsp90 chaperone complexfacilitates the maturation and transport of a PAMP receptor in riceinnate immunity Cell Host Microbe 7 185ndash196

48 Hahn JS (2005) Regulation of Nod1 by Hsp90 chaperone complexFEBS Lett 579 4513ndash4519

49 Aktories K et al (2000) Rho GTPases as targets of bacterial proteintoxins Biol Chem 381 421ndash426

Review Trends in Immunology March 2014 Vol 35 No 3

50 Huang Z et al (2009) Structural insights into host GTPase isoformselection by a family of bacterial GEF mimics Nat Struct Mol Biol16 853ndash860

51 Bulgin RR et al (2009) EspT triggers formation of lamellipodia andmembrane ruffles through activation of Rac-1 and Cdc42 CellMicrobiol 11 217ndash229

52 Hardt WD et al (1998) S typhimurium encodes an activator of RhoGTPases that induces membrane ruffling and nuclear responses inhost cells Cell 93 815ndash826

53 Friebel A et al (2001) SopE and SopE2 from Salmonellatyphimurium activate different sets of RhoGTPases of the host cellJ Biol Chem 276 34035ndash34040

54 Arbeloa A et al (2010) EspM2 is a RhoA guanine nucleotide exchangefactor Cell Microbiol 12 654ndash664

55 Fukazawa A et al (2008) GEF-H1 mediated control of NOD1dependent NF-kappaB activation by Shigella effectors PLoSPathog 4 e1000228

56 Norris FA et al (1998) SopB a protein required for virulence ofSalmonella dublin is an inositol phosphate phosphatase Proc NatlAcad Sci USA 95 14057ndash14059

57 Zhou D et al (2001) A Salmonella inositol polyphosphatase acts inconjunction with other bacterial effectors to promote host cell actincytoskeleton rearrangements and bacterial internalization MolMicrobiol 39 248ndash259

58 Krause-Gruszczynska M et al (2011) The signaling pathway ofCampylobacter jejuni-induced Cdc42 activation role of fibronectinintegrin beta1 tyrosine kinases and guanine exchange factor Vav2Cell Commun Signal 9 32

59 Schmidt G et al (1997) Gln 63 of Rho is deamidated by Escherichiacoli cytotoxic necrotizing factor-1 Nature 387 725ndash729

60 Flatau G et al (1997) Toxin-induced activation of the G protein p21Rho by deamidation of glutamine Nature 387 729ndash733

61 Lerm M et al (1999) Deamidation of Cdc42 and Rac by Escherichiacoli cytotoxic necrotizing factor 1 activation of c-Jun N-terminalkinase in HeLa cells Infect Immun 67 496ndash503

62 Konkel ME et al (1999) Identification of proteins required for theinternalization of Campylobacter jejuni into cultured mammaliancells Adv Exp Med Biol 473 215ndash224

63 Rivera-Amill V and Konkel ME (1999) Secretion of Campylobacterjejuni Cia proteins is contact dependent Adv Exp Med Biol 473225ndash229

64 Malik-Kale P et al (2008) Culture of Campylobacter jejuni withsodium deoxycholate induces virulence gene expression JBacteriol 190 2286ndash2297

65 Konkel ME et al (2004) Secretion of virulence proteins fromCampylobacter jejuni is dependent on a functional flagellar exportapparatus J Bacteriol 186 3296ndash3303

66 Neal-McKinney JM and Konkel ME (2012) The Campylobacterjejuni CiaC virulence protein is secreted from the flagellum anddelivered to the cytosol of host cells Front Cell Infect Microbiol2 31

67 Eucker TP and Konkel ME (2012) The cooperative action ofbacterial fibronectin-binding proteins and secreted proteinspromote maximal Campylobacter jejuni invasion of host cells bystimulating membrane ruffling Cell Microbiol 14 226ndash238

68 Boehm M et al (2011) Major host factors involved in epithelial cellinvasion of Campylobacter jejuni role of fibronectin integrin beta1FAK Tiam-1 and DOCK180 in activating Rho GTPase Rac1 FrontCell Infect Microbiol 1 17

69 Chen LM et al (1996) Requirement of CDC42 for Salmonella-induced cytoskeletal and nuclear responses Science 274 2115ndash2118

70 Hobbie S et al (1997) Involvement of mitogen-activated proteinkinase pathways in the nuclear responses and cytokine productioninduced by Salmonella typhimurium in cultured intestinal epithelialcells J Immunol 159 5550ndash5559

71 Savkovic SD et al (1997) Activation of NF-kappaB in intestinalepithelial cells by enteropathogenic Escherichia coli Am J Physiol273 C1160ndashC1167

72 Zurawski DV et al (2008) The NleEOspZ family of effector proteinsis required for polymorphonuclear transepithelial migration acharacteristic shared by enteropathogenic Escherichia coli andShigella flexneri infections Infect Immun 76 369ndash379

73 Figueiredo JF et al (2009) Salmonella enterica Typhimurium SipAinduces CXC-chemokine expression through p38MAPK and JUNpathways Microbes Infect 11 302ndash310

74 Raymond B et al (2011) The WxxxE effector EspT triggersexpression of immune mediators in an ErkJNK and NF-kappaB-dependent manner Cell Microbiol 13 1881ndash1893

75 Schlumberger MC et al (2003) Amino acids of the bacterial toxinSopE involved in G nucleotide exchange on Cdc42 J Biol Chem 27827149ndash27159

76 Hoffmann C et al (2010) In macrophages caspase-1 activation bySopE and the type III secretion system-1 of S typhimurium canproceed in the absence of flagellin PLoS ONE 5 e12477

77 Muller AJ et al (2009) The S Typhimurium effector SopE inducescaspase-1 activation in stromal cells to initiate gut inflammation CellHost Microbe 6 125ndash136

78 Yoo NJ et al (2002) Nod1 a CARD protein enhances pro-interleukin-1beta processing through the interaction with pro-caspase-1 Biochem Biophys Res Commun 299 652ndash658

79 Haglund CM and Welch MD (2011) Pathogens and polymersmicrobe-host interactions illuminate the cytoskeleton J Cell Biol195 7ndash17

80 Patel JC and Galan JE (2005) Manipulation of the host actincytoskeleton by Salmonella ndash all in the name of entry Curr OpinMicrobiol 8 10ndash15

81 Celli J et al (2000) Enteropathogenic Escherichia coli (EPEC)attachment to epithelial cells exploiting the host cell cytoskeletonfrom the outside Cell Microbiol 2 1ndash9

82 Boquet P and Lemichez E (2003) Bacterial virulence factorstargeting Rho GTPases parasitism or symbiosis Trends Cell Biol13 238ndash246

83 Jones JD and Dangl JL (2006) The plant immune system Nature444 323ndash329

84 Stuart LM et al (2013) Effector-triggered versus pattern-triggeredimmunity how animals sense pathogens Nat Rev Immunol 13199ndash206

85 Stecher B et al (2007) Salmonella enterica serovar typhimuriumexploits inflammation to compete with the intestinal microbiotaPLoS Biol 5 2177ndash2189

86 Lupp C et al (2007) Host-mediated inflammation disrupts theintestinal microbiota and promotes the overgrowth ofEnterobacteriaceae Cell Host Microbe 2 119ndash129

87 Winter SE et al (2013) Host-derived nitrate boosts growth of E coliin the inflamed gut Science 339 708ndash711

88 Lopez CA et al (2012) Phage-mediated acquisition of a type IIIsecreted effector protein boosts growth of salmonella by nitraterespiration MBio 3 e00143-12

89 Winter SE et al (2010) Gut inflammation provides a respiratoryelectron acceptor for Salmonella Nature 467 426ndash429

90 Lawley TD et al (2008) Host transmission of Salmonella entericaserovar Typhimurium is controlled by virulence factors andindigenous intestinal microbiota Infect Immun 76 403ndash416

91 Bonardi V et al (2012) A new eye on NLR proteins focused on clarityor diffused by complexity Curr Opin Immunol 24 41ndash50

92 Staskawicz BJ et al (2001) Common and contrasting themes ofplant and animal diseases Science 292 2285ndash2289

93 Pinheiro VB and Ellar DJ (2006) How to kill a mocking bug CellMicrobiol 8 545ndash557

94 Choe KM et al (2002) Requirement for a peptidoglycan recognitionprotein (PGRP) in Relish activation and antibacterial immuneresponses in Drosophila Science 296 359ndash362

95 Takehana A et al (2002) Overexpression of a pattern-recognitionreceptor peptidoglycan-recognition protein-LE activates imdrelish-mediated antibacterial defense and the prophenoloxidase cascade inDrosophila larvae Proc Natl Acad Sci USA 99 13705ndash13710

96 Georgel P et al (2001) Drosophila immune deficiency (IMD) is adeath domain protein that activates antibacterial defense and canpromote apoptosis Dev Cell 1 503ndash514

97 Dushay MS et al (1996) Origins of immunity relish a compoundRel-like gene in the antibacterial defense of Drosophila Proc NatlAcad Sci USA 93 10343ndash10347

98 Stuart LM and Boyer L (2013) RhoGTPases ndash NODes for effector-triggered immunity in animals Cell Res 23 980ndash981

129

Review Trends in Immunology March 2014 Vol 35 No 3

99 Dziarski R and Gupta D (2010) Review mammalian peptidoglycanrecognition proteins (PGRPs) in innate immunity Innate Immun 16168ndash174

100 Murray PJ (2005) NOD proteins an intracellular pathogen-recognition system or signal transduction modifiers Curr OpinImmunol 17 352ndash358

101 Just I et al (1995) Glucosylation of Rho proteins by Clostridiumdifficile toxin B Nature 375 500ndash503

102 Ohguchi K et al (1996) Effects of Clostridium difficile toxin A andtoxin B on phospholipase D activation in human promyelocyticleukemic HL60 cells Infect Immun 64 4433ndash4437

103 Goehring UM et al (1999) The N-terminal domain of Pseudomonasaeruginosa exoenzyme S is a GTPase-activating protein for RhoGTPases J Biol Chem 274 36369ndash36372

104 Black DS and Bliska JB (2000) The RhoGAP activity of theYersinia pseudotuberculosis cytotoxin YopE is required forantiphagocytic function and virulence Mol Microbiol 37 515ndash527

130

105 Von Pawel-Rammingen U et al (2000) GAP activity of the YersiniaYopE cytotoxin specifically targets the Rho pathway a mechanism fordisruption of actin microfilament structure Mol Microbiol 36 737ndash748

106 Fu Y and Galan JE (1999) A salmonella protein antagonizes Rac-1and Cdc42 to mediate host-cell recovery after bacterial invasionNature 401 293ndash297

107 Joneson T et al (1996) RAC regulation of actin polymerization andproliferation by a pathway distinct from Jun kinase Science 2741374ndash1376

108 Bhavsar AP et al (2013) The Salmonella type III effector SspH2specifically exploits the NLR co-chaperone activity of SGT1 to subvertimmunity PLoS Pathog 9 e1003518

109 Baruch K et al (2011) Metalloprotease type III effectors thatspecifically cleave JNK and NF-kappaB EMBO J 30 221ndash231

110 Yen H et al (2010) NleC a type III secretion protease compromises NF-kappaB activation by targeting p65RelA PLoS Pathog 6 e1001231

  • Detection of enteric pathogens by the nodosome
    • Distinguishing friend from foe in the gut
    • NOD proteins in pathogen detection and maintenance of gut immune homeostasis
    • Formation of the nodosome
    • Detection of bacterial virulence factors by the nodosome
    • Evolution of the NOD1 signaling pathway
    • Concluding remarks
    • Acknowledgments
    • Supplementary data
      • References

Review Trends in Immunology March 2014 Vol 35 No 3

they benefit from the ensuing inflammatory host responseThis viewpoint is supported by recent data suggesting thatintestinal inflammation confers a fitness advantage uponS Typhimurium E coli and C rodentium during theircompetition with the obligate anaerobic microbial commu-nity that dominates the healthy gut [85ndash87] A bloom of STyphimurium and E coli in the inflamed gut is supportedby host-derived electron acceptors which are generated asbyproducts of the inflammatory host response [87ndash89]Interestingly the SopE protein which is present in onlya subset of S Typhimurium isolates alters host responsesby increasing expression of inducible NO synthase (iNOS)an enzyme that produces NO Conversion of NO to nitrateincreases growth of SopE-producing S Typhimuriumstrains in the intestinal lumen through nitrate respiration[88] Enhanced growth of S Typhimurium in the intestinallumen increases transmission of the pathogen [90] whichrepresents a potent selective force for the evolution ofenteric pathogens In other words the reason for deployingvirulence factors that trigger the NOD1 signaling pathwaymight be that the ensuing host response selectively feedsthe respective enteric pathogens

In summary manipulation of small Rho GTPases bybacterial virulence factors is a common theme in microbialpathogenesis (Box 1) and detection of these pathogen-induced processes by the innate immune system enablesthe host to distinguish pathogens from microbes with lowerpathogenic potential From an evolutionary point of view itis also interesting to note that detection of bacterial effec-tor proteins is a feature of the innate immune system thatis conserved from plants to mammals This observationraises the question whether signaling pathways involvedin detecting these patterns of pathogenesis are also con-served between the different phyla

Evolution of the NOD1 signaling pathwayNOD1 and NOD2 of mammals are thought to have evolvedindependently from plant NLRs suggesting that function-al similarities and the presence of similar protein domains(ie the presence of similar C-terminal leucine-richrepeats and similar central nucleotide-binding oligomeri-zation motifs) are features that developed independently indifferent lineages Furthermore the Drosophila melano-gaster genome does not encode homologs of the mammalianNOD1 or NOD2 proteins (reviewed in [9192]) Insteaddiaminopimelic acid-type peptidoglycan from Gram-nega-tive bacteria is detected in D melanogaster through theimmune deficiency (IMD) pathway which shares homologyto the tumor necrosis factor (TNF)-a signaling pathway inmammals [93] In the IMD pathway peptidoglycan isdetected by the transmembrane receptor peptidoglycan-recognition protein (PGRP)-LC [94] or the cytoplasmicreceptor PGRP-LE [95] Upon binding of peptidoglycanPGRP-LC and PGRP-LE activate IMD a death domainprotein with homology to RIP1 the RIP kinase associatedwith TNF-a-dependent NF-kB activation [96] In turnIMD activates the transcription factor Relish which is amember of the NF-kB family [97]

Interestingly recent studies raise the possibility thatthe IMD and NOD1 signaling pathways represent evolu-tionary conserved signaling cascades for the detection of

diaminopimelic acid-type peptidoglycan (reviewed in [98])First the E coli CNF-1 toxin constitutively activatesRAC2 in Drosophila cells thereby inducing the IMD path-way [43] and diaminopimelic acid-type peptidoglycan acti-vates the NOD1-signalling pathway in human cellsthrough a RAC1-dependent mechanism [40] Thus a re-quirement for small Rho GTPases is a feature sharedbetween the IMD and NOD1 pathways but absent fromthe TNF-a signaling pathway Second human RAC2induces NF-kB activation through RIP1 and RIP2 [43]These data suggest that the IMD homolog RIP1 is not onlyinvolved in TNF-a signaling but also participates indetecting the activation state of small Rho GTPases whichconfirms the similarities between the IMD and NOD1signaling pathways There are however some notable dif-ferences between the IMD and NOD1 pathways includingthe absence of a NOD1 homolog in insects and the fact thatmammalian PGRPs do not function in the NOD1 signalingpathway [99]

In summary recent evidence provides some support forthe idea that the signaling pathways detecting diamino-pimelic acid-type peptidoglycan in mammals and insectsshare a common ancestry (reviewed in [98]) This observa-tion along with the finding that the Drosophila Toll proteinand the homologous mammalian TLRs both function ascellular sensors of microbes highlights the conservation ofinnate immune surveillance mechanism within the animalkingdom

Concluding remarksThe picture emerging from these studies is that NODproteins provide epithelial cells with important sentinelfunctions for detecting pathogen-induced violations of theintegrity of the host cell cytoplasm Many enteric patho-gens produce virulence factors that manipulate the activityof small Rho GTPases to mediate attachment or entry or toinhibit phagocytosis (Figure 1 and Box 1) As a result thehost can detect the presence of pathogens by monitoringthe activation state of small Rho GTPases The down-stream signaling pathways enable the intestinal epitheli-um to mount responses that are appropriate to the threatincluding NF-kB activation activation of the autophagypathway and the release of antimicrobial peptides Theability of the epithelium to react appropriately is impor-tant for balancing host responses against microbial com-munities in the gastrointestinal tract When thesemechanisms for maintaining immune homeostasis aredisrupted by mutations that impair NOD2 signaling orthe autophagy pathway the host has an increasing risk ofdeveloping intestinal inflammation

Direct evidence for the binding of NOD1 to peptidogly-can is lacking therefore it has been speculated that thisprotein might function in signal transduction rather thanserving as an innate immune receptor for peptidoglycan[100] Interestingly NOD1-dependent NF-kB activationelicited by diaminopimelic acid-type peptidoglycanrequires the presence of active RAC1 [40] thereby raisingthe possibility that peptidoglycan is sensed in mammalsby an innate immune receptor acting upstream of thissmall Rho GTPase (Figure 1) which represents an excitingarea for future research

127

Review Trends in Immunology March 2014 Vol 35 No 3

AcknowledgmentsWork in AJBrsquos laboratory is supported by Public Health Service GrantsAI044170 and AI076246 AMK is supported by the American HeartAssociation Grant 12SDG12220022

Appendix A Supplementary dataSupplementary data associated with this article can befound in the online version at httpdxdoiorg101016jit201310009

References1 Gewirtz AT et al (2001) Cutting edge bacterial flagellin activates

basolaterally expressed TLR5 to induce epithelial proinflammatorygene expression J Immunol 167 1882ndash1885

2 Weber B et al (2009) Intestinal macrophages differentiation andinvolvement in intestinal immunopathologies Semin Immunopathol31 171ndash184

3 Vance RE et al (2009) Patterns of pathogenesis discrimination ofpathogenic and nonpathogenic microbes by the innate immunesystem Cell Host Microbe 6 10ndash21

4 Biswas A and Kobayashi KS (2013) Regulation of intestinalmicrobiota by the NLR protein family Int Immunol 25 207ndash214

5 Kim JG et al (2004) Nod1 is an essential signal transducer inintestinal epithelial cells infected with bacteria that avoidrecognition by toll-like receptors Infect Immun 72 1487ndash1495

6 Chamaillard M et al (2004) Battling enteroinvasive bacteria Nod1comes to the rescue Trends Microbiol 12 529ndash532

7 Girardin SE et al (2001) CARD4Nod1 mediates NF-kappaB andJNK activation by invasive Shigella flexneri EMBO Rep 2 736ndash742

8 Zilbauer M et al (2007) A major role for intestinal epithelialnucleotide oligomerization domain 1 (NOD1) in eliciting hostbactericidal immune responses to Campylobacter jejuni CellMicrobiol 9 2404ndash2416

9 Viala J et al (2004) Nod1 responds to peptidoglycan delivered by theHelicobacter pylori cag pathogenicity island Nat Immunol 5 1166ndash1174

10 Allison CC et al (2009) Helicobacter pylori induces MAPKphosphorylation and AP-1 activation via a NOD1-dependentmechanism J Immunol 183 8099ndash8109

11 Geddes K et al (2010) Nod1 and Nod2 regulation of inflammation inthe Salmonella colitis model Infect Immun 78 5107ndash5115

12 Keestra AM et al (2011) A Salmonella virulence factor activates theNOD1NOD2 signaling pathway MBio 2 e00266ndash11

13 Travassos LH et al (2010) Nod1 and Nod2 direct autophagy byrecruiting ATG16L1 to the plasma membrane at the site of bacterialentry Nat Immunol 11 55ndash62

14 Ogura Y et al (2001) Nod2 a Nod1Apaf-1 family member that isrestricted to monocytes and activates NF-kappaB J Biol Chem 2764812ndash4818

15 Kobayashi KS et al (2005) Nod2-dependent regulation of innate andadaptive immunity in the intestinal tract Science 307 731ndash734

16 Hampe J et al (2001) Association between insertion mutation inNOD2 gene and Crohnrsquos disease in German and British populationsLancet 357 1925ndash1928

17 Wehkamp J et al (2004) NOD2 (CARD15) mutations in Crohnrsquosdisease are associated with diminished mucosal alpha-defensinexpression Gut 53 1658ndash1664

18 Salzman NH et al (2003) Protection against enteric salmonellosis intransgenic mice expressing a human intestinal defensin Nature 422522ndash526

19 Chu H et al (2012) Human alpha-defensin 6 promotes mucosalinnate immunity through self-assembled peptide nanonets Science337 477ndash481

20 Biswas A et al (2010) Induction and rescue of Nod2-dependent Th1-driven granulomatous inflammation of the ileum Proc Natl AcadSci USA 107 14739ndash14744

21 Girardin SE et al (2003) Nod1 detects a unique muropeptide fromgram-negative bacterial peptidoglycan Science 300 1584ndash1587

22 Chamaillard M et al (2003) An essential role for NOD1 in hostrecognition of bacterial peptidoglycan containing diaminopimelicacid Nat Immunol 4 702ndash707

128

23 Inohara N et al (2003) Host recognition of bacterial muramyldipeptide mediated through NOD2 Implications for Crohnrsquosdisease J Biol Chem 278 5509ndash5512

24 Girardin SE et al (2003) Nod2 is a general sensor of peptidoglycanthrough muramyl dipeptide (MDP) detection J Biol Chem 2788869ndash8872

25 Tattoli I et al (2007) The nodosome Nod1 and Nod2 controlbacterial infections and inflammation Semin Immunopathol 29289ndash301

26 Rosenstiel P et al (2006) A short isoform of NOD2CARD15 NOD2-S is an endogenous inhibitor of NOD2receptor-interacting proteinkinase 2-induced signaling pathways Proc Natl Acad Sci USA103 3280ndash3285

27 Inohara N et al (1999) Nod1 an Apaf-1-like activator of caspase-9and nuclear factor-kappaB J Biol Chem 274 14560ndash14567

28 Park JH et al (2007) RICKRIP2 mediates innate immuneresponses induced through Nod1 and Nod2 but not TLRs JImmunol 178 2380ndash2386

29 Grubman A et al (2010) The innate immune molecule NOD1regulates direct killing of Helicobacter pylori by antimicrobialpeptides Cell Microbiol 12 626ndash639

30 Yeretssian G et al (2011) Non-apoptotic role of BID in inflammationand innate immunity Nature 474 96ndash99

31 Kufer TA et al (2008) The pattern-recognition molecule Nod1 islocalized at the plasma membrane at sites of bacterial interactionCell Microbiol 10 477ndash486

32 Barnich N et al (2005) Membrane recruitment of NOD2 in intestinalepithelial cells is essential for nuclear factor-kappaB activation inmuramyl dipeptide recognition J Cell Biol 170 21ndash26

33 Lecine P et al (2007) The NOD2-RICK complex signals from theplasma membrane J Biol Chem 282 15197ndash15207

34 Abbott DW et al (2004) The Crohnrsquos disease protein NOD2requires RIP2 in order to induce ubiquitinylation of a novel site onNEMO Curr Biol 14 2217ndash2227

35 Hasegawa M et al (2008) A critical role of RICKRIP2polyubiquitination in Nod-induced NF-kappaB activation EMBO J27 373ndash383

36 da Silva Correia J et al (2007) SGT1 is essential for Nod1 activationProc Natl Acad Sci USA 104 6764ndash6769

37 Mayor A et al (2007) A crucial function of SGT1 and HSP90 ininflammasome activity links mammalian and plant innate immuneresponses Nat Immunol 8 497ndash503

38 Lipinski S et al (2012) RNAi screening identifies mediators of NOD2signaling implications for spatial specificity of MDP recognitionProc Natl Acad Sci USA 109 21426ndash21431

39 Warner N et al (2013) A genome-wide siRNA screen reveals positiveand negative regulators of the NOD2 and NF-kappaB signalingpathways Sci Signal 6 rs3

40 Keestra AM et al (2013) Manipulation of small Rho GTPases is apathogen-induced process detected by NOD1 Nature 496 233ndash237

41 Narumiya S (1996) The small GTPase Rho cellular functions andsignal transduction J Biochem 120 215ndash228

42 Perona R et al (1997) Activation of the nuclear factor-kappaB byRho CDC42 and Rac-1 proteins Genes Dev 11 463ndash475

43 Boyer L et al (2011) Pathogen-derived effectors trigger protectiveimmunity via activation of the Rac2 enzyme and the IMD or Ripkinase signaling pathway Immunity 35 536ndash549

44 Legrand-Poels S et al (2007) Modulation of Nod2-dependentNF-kappaB signaling by the actin cytoskeleton J Cell Sci 1201299ndash1310

45 Zhao Y et al (2012) Control of NOD2 and Rip2-dependent innateimmune activation by GEF-H1 Inflamm Bowel Dis 18 603ndash612

46 Thao NP et al (2007) RAR1 and HSP90 form a complex with RacRop GTPase and function in innate-immune responses in rice PlantCell 19 4035ndash4045

47 Chen L et al (2010) The HopSti1-Hsp90 chaperone complexfacilitates the maturation and transport of a PAMP receptor in riceinnate immunity Cell Host Microbe 7 185ndash196

48 Hahn JS (2005) Regulation of Nod1 by Hsp90 chaperone complexFEBS Lett 579 4513ndash4519

49 Aktories K et al (2000) Rho GTPases as targets of bacterial proteintoxins Biol Chem 381 421ndash426

Review Trends in Immunology March 2014 Vol 35 No 3

50 Huang Z et al (2009) Structural insights into host GTPase isoformselection by a family of bacterial GEF mimics Nat Struct Mol Biol16 853ndash860

51 Bulgin RR et al (2009) EspT triggers formation of lamellipodia andmembrane ruffles through activation of Rac-1 and Cdc42 CellMicrobiol 11 217ndash229

52 Hardt WD et al (1998) S typhimurium encodes an activator of RhoGTPases that induces membrane ruffling and nuclear responses inhost cells Cell 93 815ndash826

53 Friebel A et al (2001) SopE and SopE2 from Salmonellatyphimurium activate different sets of RhoGTPases of the host cellJ Biol Chem 276 34035ndash34040

54 Arbeloa A et al (2010) EspM2 is a RhoA guanine nucleotide exchangefactor Cell Microbiol 12 654ndash664

55 Fukazawa A et al (2008) GEF-H1 mediated control of NOD1dependent NF-kappaB activation by Shigella effectors PLoSPathog 4 e1000228

56 Norris FA et al (1998) SopB a protein required for virulence ofSalmonella dublin is an inositol phosphate phosphatase Proc NatlAcad Sci USA 95 14057ndash14059

57 Zhou D et al (2001) A Salmonella inositol polyphosphatase acts inconjunction with other bacterial effectors to promote host cell actincytoskeleton rearrangements and bacterial internalization MolMicrobiol 39 248ndash259

58 Krause-Gruszczynska M et al (2011) The signaling pathway ofCampylobacter jejuni-induced Cdc42 activation role of fibronectinintegrin beta1 tyrosine kinases and guanine exchange factor Vav2Cell Commun Signal 9 32

59 Schmidt G et al (1997) Gln 63 of Rho is deamidated by Escherichiacoli cytotoxic necrotizing factor-1 Nature 387 725ndash729

60 Flatau G et al (1997) Toxin-induced activation of the G protein p21Rho by deamidation of glutamine Nature 387 729ndash733

61 Lerm M et al (1999) Deamidation of Cdc42 and Rac by Escherichiacoli cytotoxic necrotizing factor 1 activation of c-Jun N-terminalkinase in HeLa cells Infect Immun 67 496ndash503

62 Konkel ME et al (1999) Identification of proteins required for theinternalization of Campylobacter jejuni into cultured mammaliancells Adv Exp Med Biol 473 215ndash224

63 Rivera-Amill V and Konkel ME (1999) Secretion of Campylobacterjejuni Cia proteins is contact dependent Adv Exp Med Biol 473225ndash229

64 Malik-Kale P et al (2008) Culture of Campylobacter jejuni withsodium deoxycholate induces virulence gene expression JBacteriol 190 2286ndash2297

65 Konkel ME et al (2004) Secretion of virulence proteins fromCampylobacter jejuni is dependent on a functional flagellar exportapparatus J Bacteriol 186 3296ndash3303

66 Neal-McKinney JM and Konkel ME (2012) The Campylobacterjejuni CiaC virulence protein is secreted from the flagellum anddelivered to the cytosol of host cells Front Cell Infect Microbiol2 31

67 Eucker TP and Konkel ME (2012) The cooperative action ofbacterial fibronectin-binding proteins and secreted proteinspromote maximal Campylobacter jejuni invasion of host cells bystimulating membrane ruffling Cell Microbiol 14 226ndash238

68 Boehm M et al (2011) Major host factors involved in epithelial cellinvasion of Campylobacter jejuni role of fibronectin integrin beta1FAK Tiam-1 and DOCK180 in activating Rho GTPase Rac1 FrontCell Infect Microbiol 1 17

69 Chen LM et al (1996) Requirement of CDC42 for Salmonella-induced cytoskeletal and nuclear responses Science 274 2115ndash2118

70 Hobbie S et al (1997) Involvement of mitogen-activated proteinkinase pathways in the nuclear responses and cytokine productioninduced by Salmonella typhimurium in cultured intestinal epithelialcells J Immunol 159 5550ndash5559

71 Savkovic SD et al (1997) Activation of NF-kappaB in intestinalepithelial cells by enteropathogenic Escherichia coli Am J Physiol273 C1160ndashC1167

72 Zurawski DV et al (2008) The NleEOspZ family of effector proteinsis required for polymorphonuclear transepithelial migration acharacteristic shared by enteropathogenic Escherichia coli andShigella flexneri infections Infect Immun 76 369ndash379

73 Figueiredo JF et al (2009) Salmonella enterica Typhimurium SipAinduces CXC-chemokine expression through p38MAPK and JUNpathways Microbes Infect 11 302ndash310

74 Raymond B et al (2011) The WxxxE effector EspT triggersexpression of immune mediators in an ErkJNK and NF-kappaB-dependent manner Cell Microbiol 13 1881ndash1893

75 Schlumberger MC et al (2003) Amino acids of the bacterial toxinSopE involved in G nucleotide exchange on Cdc42 J Biol Chem 27827149ndash27159

76 Hoffmann C et al (2010) In macrophages caspase-1 activation bySopE and the type III secretion system-1 of S typhimurium canproceed in the absence of flagellin PLoS ONE 5 e12477

77 Muller AJ et al (2009) The S Typhimurium effector SopE inducescaspase-1 activation in stromal cells to initiate gut inflammation CellHost Microbe 6 125ndash136

78 Yoo NJ et al (2002) Nod1 a CARD protein enhances pro-interleukin-1beta processing through the interaction with pro-caspase-1 Biochem Biophys Res Commun 299 652ndash658

79 Haglund CM and Welch MD (2011) Pathogens and polymersmicrobe-host interactions illuminate the cytoskeleton J Cell Biol195 7ndash17

80 Patel JC and Galan JE (2005) Manipulation of the host actincytoskeleton by Salmonella ndash all in the name of entry Curr OpinMicrobiol 8 10ndash15

81 Celli J et al (2000) Enteropathogenic Escherichia coli (EPEC)attachment to epithelial cells exploiting the host cell cytoskeletonfrom the outside Cell Microbiol 2 1ndash9

82 Boquet P and Lemichez E (2003) Bacterial virulence factorstargeting Rho GTPases parasitism or symbiosis Trends Cell Biol13 238ndash246

83 Jones JD and Dangl JL (2006) The plant immune system Nature444 323ndash329

84 Stuart LM et al (2013) Effector-triggered versus pattern-triggeredimmunity how animals sense pathogens Nat Rev Immunol 13199ndash206

85 Stecher B et al (2007) Salmonella enterica serovar typhimuriumexploits inflammation to compete with the intestinal microbiotaPLoS Biol 5 2177ndash2189

86 Lupp C et al (2007) Host-mediated inflammation disrupts theintestinal microbiota and promotes the overgrowth ofEnterobacteriaceae Cell Host Microbe 2 119ndash129

87 Winter SE et al (2013) Host-derived nitrate boosts growth of E coliin the inflamed gut Science 339 708ndash711

88 Lopez CA et al (2012) Phage-mediated acquisition of a type IIIsecreted effector protein boosts growth of salmonella by nitraterespiration MBio 3 e00143-12

89 Winter SE et al (2010) Gut inflammation provides a respiratoryelectron acceptor for Salmonella Nature 467 426ndash429

90 Lawley TD et al (2008) Host transmission of Salmonella entericaserovar Typhimurium is controlled by virulence factors andindigenous intestinal microbiota Infect Immun 76 403ndash416

91 Bonardi V et al (2012) A new eye on NLR proteins focused on clarityor diffused by complexity Curr Opin Immunol 24 41ndash50

92 Staskawicz BJ et al (2001) Common and contrasting themes ofplant and animal diseases Science 292 2285ndash2289

93 Pinheiro VB and Ellar DJ (2006) How to kill a mocking bug CellMicrobiol 8 545ndash557

94 Choe KM et al (2002) Requirement for a peptidoglycan recognitionprotein (PGRP) in Relish activation and antibacterial immuneresponses in Drosophila Science 296 359ndash362

95 Takehana A et al (2002) Overexpression of a pattern-recognitionreceptor peptidoglycan-recognition protein-LE activates imdrelish-mediated antibacterial defense and the prophenoloxidase cascade inDrosophila larvae Proc Natl Acad Sci USA 99 13705ndash13710

96 Georgel P et al (2001) Drosophila immune deficiency (IMD) is adeath domain protein that activates antibacterial defense and canpromote apoptosis Dev Cell 1 503ndash514

97 Dushay MS et al (1996) Origins of immunity relish a compoundRel-like gene in the antibacterial defense of Drosophila Proc NatlAcad Sci USA 93 10343ndash10347

98 Stuart LM and Boyer L (2013) RhoGTPases ndash NODes for effector-triggered immunity in animals Cell Res 23 980ndash981

129

Review Trends in Immunology March 2014 Vol 35 No 3

99 Dziarski R and Gupta D (2010) Review mammalian peptidoglycanrecognition proteins (PGRPs) in innate immunity Innate Immun 16168ndash174

100 Murray PJ (2005) NOD proteins an intracellular pathogen-recognition system or signal transduction modifiers Curr OpinImmunol 17 352ndash358

101 Just I et al (1995) Glucosylation of Rho proteins by Clostridiumdifficile toxin B Nature 375 500ndash503

102 Ohguchi K et al (1996) Effects of Clostridium difficile toxin A andtoxin B on phospholipase D activation in human promyelocyticleukemic HL60 cells Infect Immun 64 4433ndash4437

103 Goehring UM et al (1999) The N-terminal domain of Pseudomonasaeruginosa exoenzyme S is a GTPase-activating protein for RhoGTPases J Biol Chem 274 36369ndash36372

104 Black DS and Bliska JB (2000) The RhoGAP activity of theYersinia pseudotuberculosis cytotoxin YopE is required forantiphagocytic function and virulence Mol Microbiol 37 515ndash527

130

105 Von Pawel-Rammingen U et al (2000) GAP activity of the YersiniaYopE cytotoxin specifically targets the Rho pathway a mechanism fordisruption of actin microfilament structure Mol Microbiol 36 737ndash748

106 Fu Y and Galan JE (1999) A salmonella protein antagonizes Rac-1and Cdc42 to mediate host-cell recovery after bacterial invasionNature 401 293ndash297

107 Joneson T et al (1996) RAC regulation of actin polymerization andproliferation by a pathway distinct from Jun kinase Science 2741374ndash1376

108 Bhavsar AP et al (2013) The Salmonella type III effector SspH2specifically exploits the NLR co-chaperone activity of SGT1 to subvertimmunity PLoS Pathog 9 e1003518

109 Baruch K et al (2011) Metalloprotease type III effectors thatspecifically cleave JNK and NF-kappaB EMBO J 30 221ndash231

110 Yen H et al (2010) NleC a type III secretion protease compromises NF-kappaB activation by targeting p65RelA PLoS Pathog 6 e1001231

  • Detection of enteric pathogens by the nodosome
    • Distinguishing friend from foe in the gut
    • NOD proteins in pathogen detection and maintenance of gut immune homeostasis
    • Formation of the nodosome
    • Detection of bacterial virulence factors by the nodosome
    • Evolution of the NOD1 signaling pathway
    • Concluding remarks
    • Acknowledgments
    • Supplementary data
      • References

Review Trends in Immunology March 2014 Vol 35 No 3

AcknowledgmentsWork in AJBrsquos laboratory is supported by Public Health Service GrantsAI044170 and AI076246 AMK is supported by the American HeartAssociation Grant 12SDG12220022

Appendix A Supplementary dataSupplementary data associated with this article can befound in the online version at httpdxdoiorg101016jit201310009

References1 Gewirtz AT et al (2001) Cutting edge bacterial flagellin activates

basolaterally expressed TLR5 to induce epithelial proinflammatorygene expression J Immunol 167 1882ndash1885

2 Weber B et al (2009) Intestinal macrophages differentiation andinvolvement in intestinal immunopathologies Semin Immunopathol31 171ndash184

3 Vance RE et al (2009) Patterns of pathogenesis discrimination ofpathogenic and nonpathogenic microbes by the innate immunesystem Cell Host Microbe 6 10ndash21

4 Biswas A and Kobayashi KS (2013) Regulation of intestinalmicrobiota by the NLR protein family Int Immunol 25 207ndash214

5 Kim JG et al (2004) Nod1 is an essential signal transducer inintestinal epithelial cells infected with bacteria that avoidrecognition by toll-like receptors Infect Immun 72 1487ndash1495

6 Chamaillard M et al (2004) Battling enteroinvasive bacteria Nod1comes to the rescue Trends Microbiol 12 529ndash532

7 Girardin SE et al (2001) CARD4Nod1 mediates NF-kappaB andJNK activation by invasive Shigella flexneri EMBO Rep 2 736ndash742

8 Zilbauer M et al (2007) A major role for intestinal epithelialnucleotide oligomerization domain 1 (NOD1) in eliciting hostbactericidal immune responses to Campylobacter jejuni CellMicrobiol 9 2404ndash2416

9 Viala J et al (2004) Nod1 responds to peptidoglycan delivered by theHelicobacter pylori cag pathogenicity island Nat Immunol 5 1166ndash1174

10 Allison CC et al (2009) Helicobacter pylori induces MAPKphosphorylation and AP-1 activation via a NOD1-dependentmechanism J Immunol 183 8099ndash8109

11 Geddes K et al (2010) Nod1 and Nod2 regulation of inflammation inthe Salmonella colitis model Infect Immun 78 5107ndash5115

12 Keestra AM et al (2011) A Salmonella virulence factor activates theNOD1NOD2 signaling pathway MBio 2 e00266ndash11

13 Travassos LH et al (2010) Nod1 and Nod2 direct autophagy byrecruiting ATG16L1 to the plasma membrane at the site of bacterialentry Nat Immunol 11 55ndash62

14 Ogura Y et al (2001) Nod2 a Nod1Apaf-1 family member that isrestricted to monocytes and activates NF-kappaB J Biol Chem 2764812ndash4818

15 Kobayashi KS et al (2005) Nod2-dependent regulation of innate andadaptive immunity in the intestinal tract Science 307 731ndash734

16 Hampe J et al (2001) Association between insertion mutation inNOD2 gene and Crohnrsquos disease in German and British populationsLancet 357 1925ndash1928

17 Wehkamp J et al (2004) NOD2 (CARD15) mutations in Crohnrsquosdisease are associated with diminished mucosal alpha-defensinexpression Gut 53 1658ndash1664

18 Salzman NH et al (2003) Protection against enteric salmonellosis intransgenic mice expressing a human intestinal defensin Nature 422522ndash526

19 Chu H et al (2012) Human alpha-defensin 6 promotes mucosalinnate immunity through self-assembled peptide nanonets Science337 477ndash481

20 Biswas A et al (2010) Induction and rescue of Nod2-dependent Th1-driven granulomatous inflammation of the ileum Proc Natl AcadSci USA 107 14739ndash14744

21 Girardin SE et al (2003) Nod1 detects a unique muropeptide fromgram-negative bacterial peptidoglycan Science 300 1584ndash1587

22 Chamaillard M et al (2003) An essential role for NOD1 in hostrecognition of bacterial peptidoglycan containing diaminopimelicacid Nat Immunol 4 702ndash707

128

23 Inohara N et al (2003) Host recognition of bacterial muramyldipeptide mediated through NOD2 Implications for Crohnrsquosdisease J Biol Chem 278 5509ndash5512

24 Girardin SE et al (2003) Nod2 is a general sensor of peptidoglycanthrough muramyl dipeptide (MDP) detection J Biol Chem 2788869ndash8872

25 Tattoli I et al (2007) The nodosome Nod1 and Nod2 controlbacterial infections and inflammation Semin Immunopathol 29289ndash301

26 Rosenstiel P et al (2006) A short isoform of NOD2CARD15 NOD2-S is an endogenous inhibitor of NOD2receptor-interacting proteinkinase 2-induced signaling pathways Proc Natl Acad Sci USA103 3280ndash3285

27 Inohara N et al (1999) Nod1 an Apaf-1-like activator of caspase-9and nuclear factor-kappaB J Biol Chem 274 14560ndash14567

28 Park JH et al (2007) RICKRIP2 mediates innate immuneresponses induced through Nod1 and Nod2 but not TLRs JImmunol 178 2380ndash2386

29 Grubman A et al (2010) The innate immune molecule NOD1regulates direct killing of Helicobacter pylori by antimicrobialpeptides Cell Microbiol 12 626ndash639

30 Yeretssian G et al (2011) Non-apoptotic role of BID in inflammationand innate immunity Nature 474 96ndash99

31 Kufer TA et al (2008) The pattern-recognition molecule Nod1 islocalized at the plasma membrane at sites of bacterial interactionCell Microbiol 10 477ndash486

32 Barnich N et al (2005) Membrane recruitment of NOD2 in intestinalepithelial cells is essential for nuclear factor-kappaB activation inmuramyl dipeptide recognition J Cell Biol 170 21ndash26

33 Lecine P et al (2007) The NOD2-RICK complex signals from theplasma membrane J Biol Chem 282 15197ndash15207

34 Abbott DW et al (2004) The Crohnrsquos disease protein NOD2requires RIP2 in order to induce ubiquitinylation of a novel site onNEMO Curr Biol 14 2217ndash2227

35 Hasegawa M et al (2008) A critical role of RICKRIP2polyubiquitination in Nod-induced NF-kappaB activation EMBO J27 373ndash383

36 da Silva Correia J et al (2007) SGT1 is essential for Nod1 activationProc Natl Acad Sci USA 104 6764ndash6769

37 Mayor A et al (2007) A crucial function of SGT1 and HSP90 ininflammasome activity links mammalian and plant innate immuneresponses Nat Immunol 8 497ndash503

38 Lipinski S et al (2012) RNAi screening identifies mediators of NOD2signaling implications for spatial specificity of MDP recognitionProc Natl Acad Sci USA 109 21426ndash21431

39 Warner N et al (2013) A genome-wide siRNA screen reveals positiveand negative regulators of the NOD2 and NF-kappaB signalingpathways Sci Signal 6 rs3

40 Keestra AM et al (2013) Manipulation of small Rho GTPases is apathogen-induced process detected by NOD1 Nature 496 233ndash237

41 Narumiya S (1996) The small GTPase Rho cellular functions andsignal transduction J Biochem 120 215ndash228

42 Perona R et al (1997) Activation of the nuclear factor-kappaB byRho CDC42 and Rac-1 proteins Genes Dev 11 463ndash475

43 Boyer L et al (2011) Pathogen-derived effectors trigger protectiveimmunity via activation of the Rac2 enzyme and the IMD or Ripkinase signaling pathway Immunity 35 536ndash549

44 Legrand-Poels S et al (2007) Modulation of Nod2-dependentNF-kappaB signaling by the actin cytoskeleton J Cell Sci 1201299ndash1310

45 Zhao Y et al (2012) Control of NOD2 and Rip2-dependent innateimmune activation by GEF-H1 Inflamm Bowel Dis 18 603ndash612

46 Thao NP et al (2007) RAR1 and HSP90 form a complex with RacRop GTPase and function in innate-immune responses in rice PlantCell 19 4035ndash4045

47 Chen L et al (2010) The HopSti1-Hsp90 chaperone complexfacilitates the maturation and transport of a PAMP receptor in riceinnate immunity Cell Host Microbe 7 185ndash196

48 Hahn JS (2005) Regulation of Nod1 by Hsp90 chaperone complexFEBS Lett 579 4513ndash4519

49 Aktories K et al (2000) Rho GTPases as targets of bacterial proteintoxins Biol Chem 381 421ndash426

Review Trends in Immunology March 2014 Vol 35 No 3

50 Huang Z et al (2009) Structural insights into host GTPase isoformselection by a family of bacterial GEF mimics Nat Struct Mol Biol16 853ndash860

51 Bulgin RR et al (2009) EspT triggers formation of lamellipodia andmembrane ruffles through activation of Rac-1 and Cdc42 CellMicrobiol 11 217ndash229

52 Hardt WD et al (1998) S typhimurium encodes an activator of RhoGTPases that induces membrane ruffling and nuclear responses inhost cells Cell 93 815ndash826

53 Friebel A et al (2001) SopE and SopE2 from Salmonellatyphimurium activate different sets of RhoGTPases of the host cellJ Biol Chem 276 34035ndash34040

54 Arbeloa A et al (2010) EspM2 is a RhoA guanine nucleotide exchangefactor Cell Microbiol 12 654ndash664

55 Fukazawa A et al (2008) GEF-H1 mediated control of NOD1dependent NF-kappaB activation by Shigella effectors PLoSPathog 4 e1000228

56 Norris FA et al (1998) SopB a protein required for virulence ofSalmonella dublin is an inositol phosphate phosphatase Proc NatlAcad Sci USA 95 14057ndash14059

57 Zhou D et al (2001) A Salmonella inositol polyphosphatase acts inconjunction with other bacterial effectors to promote host cell actincytoskeleton rearrangements and bacterial internalization MolMicrobiol 39 248ndash259

58 Krause-Gruszczynska M et al (2011) The signaling pathway ofCampylobacter jejuni-induced Cdc42 activation role of fibronectinintegrin beta1 tyrosine kinases and guanine exchange factor Vav2Cell Commun Signal 9 32

59 Schmidt G et al (1997) Gln 63 of Rho is deamidated by Escherichiacoli cytotoxic necrotizing factor-1 Nature 387 725ndash729

60 Flatau G et al (1997) Toxin-induced activation of the G protein p21Rho by deamidation of glutamine Nature 387 729ndash733

61 Lerm M et al (1999) Deamidation of Cdc42 and Rac by Escherichiacoli cytotoxic necrotizing factor 1 activation of c-Jun N-terminalkinase in HeLa cells Infect Immun 67 496ndash503

62 Konkel ME et al (1999) Identification of proteins required for theinternalization of Campylobacter jejuni into cultured mammaliancells Adv Exp Med Biol 473 215ndash224

63 Rivera-Amill V and Konkel ME (1999) Secretion of Campylobacterjejuni Cia proteins is contact dependent Adv Exp Med Biol 473225ndash229

64 Malik-Kale P et al (2008) Culture of Campylobacter jejuni withsodium deoxycholate induces virulence gene expression JBacteriol 190 2286ndash2297

65 Konkel ME et al (2004) Secretion of virulence proteins fromCampylobacter jejuni is dependent on a functional flagellar exportapparatus J Bacteriol 186 3296ndash3303

66 Neal-McKinney JM and Konkel ME (2012) The Campylobacterjejuni CiaC virulence protein is secreted from the flagellum anddelivered to the cytosol of host cells Front Cell Infect Microbiol2 31

67 Eucker TP and Konkel ME (2012) The cooperative action ofbacterial fibronectin-binding proteins and secreted proteinspromote maximal Campylobacter jejuni invasion of host cells bystimulating membrane ruffling Cell Microbiol 14 226ndash238

68 Boehm M et al (2011) Major host factors involved in epithelial cellinvasion of Campylobacter jejuni role of fibronectin integrin beta1FAK Tiam-1 and DOCK180 in activating Rho GTPase Rac1 FrontCell Infect Microbiol 1 17

69 Chen LM et al (1996) Requirement of CDC42 for Salmonella-induced cytoskeletal and nuclear responses Science 274 2115ndash2118

70 Hobbie S et al (1997) Involvement of mitogen-activated proteinkinase pathways in the nuclear responses and cytokine productioninduced by Salmonella typhimurium in cultured intestinal epithelialcells J Immunol 159 5550ndash5559

71 Savkovic SD et al (1997) Activation of NF-kappaB in intestinalepithelial cells by enteropathogenic Escherichia coli Am J Physiol273 C1160ndashC1167

72 Zurawski DV et al (2008) The NleEOspZ family of effector proteinsis required for polymorphonuclear transepithelial migration acharacteristic shared by enteropathogenic Escherichia coli andShigella flexneri infections Infect Immun 76 369ndash379

73 Figueiredo JF et al (2009) Salmonella enterica Typhimurium SipAinduces CXC-chemokine expression through p38MAPK and JUNpathways Microbes Infect 11 302ndash310

74 Raymond B et al (2011) The WxxxE effector EspT triggersexpression of immune mediators in an ErkJNK and NF-kappaB-dependent manner Cell Microbiol 13 1881ndash1893

75 Schlumberger MC et al (2003) Amino acids of the bacterial toxinSopE involved in G nucleotide exchange on Cdc42 J Biol Chem 27827149ndash27159

76 Hoffmann C et al (2010) In macrophages caspase-1 activation bySopE and the type III secretion system-1 of S typhimurium canproceed in the absence of flagellin PLoS ONE 5 e12477

77 Muller AJ et al (2009) The S Typhimurium effector SopE inducescaspase-1 activation in stromal cells to initiate gut inflammation CellHost Microbe 6 125ndash136

78 Yoo NJ et al (2002) Nod1 a CARD protein enhances pro-interleukin-1beta processing through the interaction with pro-caspase-1 Biochem Biophys Res Commun 299 652ndash658

79 Haglund CM and Welch MD (2011) Pathogens and polymersmicrobe-host interactions illuminate the cytoskeleton J Cell Biol195 7ndash17

80 Patel JC and Galan JE (2005) Manipulation of the host actincytoskeleton by Salmonella ndash all in the name of entry Curr OpinMicrobiol 8 10ndash15

81 Celli J et al (2000) Enteropathogenic Escherichia coli (EPEC)attachment to epithelial cells exploiting the host cell cytoskeletonfrom the outside Cell Microbiol 2 1ndash9

82 Boquet P and Lemichez E (2003) Bacterial virulence factorstargeting Rho GTPases parasitism or symbiosis Trends Cell Biol13 238ndash246

83 Jones JD and Dangl JL (2006) The plant immune system Nature444 323ndash329

84 Stuart LM et al (2013) Effector-triggered versus pattern-triggeredimmunity how animals sense pathogens Nat Rev Immunol 13199ndash206

85 Stecher B et al (2007) Salmonella enterica serovar typhimuriumexploits inflammation to compete with the intestinal microbiotaPLoS Biol 5 2177ndash2189

86 Lupp C et al (2007) Host-mediated inflammation disrupts theintestinal microbiota and promotes the overgrowth ofEnterobacteriaceae Cell Host Microbe 2 119ndash129

87 Winter SE et al (2013) Host-derived nitrate boosts growth of E coliin the inflamed gut Science 339 708ndash711

88 Lopez CA et al (2012) Phage-mediated acquisition of a type IIIsecreted effector protein boosts growth of salmonella by nitraterespiration MBio 3 e00143-12

89 Winter SE et al (2010) Gut inflammation provides a respiratoryelectron acceptor for Salmonella Nature 467 426ndash429

90 Lawley TD et al (2008) Host transmission of Salmonella entericaserovar Typhimurium is controlled by virulence factors andindigenous intestinal microbiota Infect Immun 76 403ndash416

91 Bonardi V et al (2012) A new eye on NLR proteins focused on clarityor diffused by complexity Curr Opin Immunol 24 41ndash50

92 Staskawicz BJ et al (2001) Common and contrasting themes ofplant and animal diseases Science 292 2285ndash2289

93 Pinheiro VB and Ellar DJ (2006) How to kill a mocking bug CellMicrobiol 8 545ndash557

94 Choe KM et al (2002) Requirement for a peptidoglycan recognitionprotein (PGRP) in Relish activation and antibacterial immuneresponses in Drosophila Science 296 359ndash362

95 Takehana A et al (2002) Overexpression of a pattern-recognitionreceptor peptidoglycan-recognition protein-LE activates imdrelish-mediated antibacterial defense and the prophenoloxidase cascade inDrosophila larvae Proc Natl Acad Sci USA 99 13705ndash13710

96 Georgel P et al (2001) Drosophila immune deficiency (IMD) is adeath domain protein that activates antibacterial defense and canpromote apoptosis Dev Cell 1 503ndash514

97 Dushay MS et al (1996) Origins of immunity relish a compoundRel-like gene in the antibacterial defense of Drosophila Proc NatlAcad Sci USA 93 10343ndash10347

98 Stuart LM and Boyer L (2013) RhoGTPases ndash NODes for effector-triggered immunity in animals Cell Res 23 980ndash981

129

Review Trends in Immunology March 2014 Vol 35 No 3

99 Dziarski R and Gupta D (2010) Review mammalian peptidoglycanrecognition proteins (PGRPs) in innate immunity Innate Immun 16168ndash174

100 Murray PJ (2005) NOD proteins an intracellular pathogen-recognition system or signal transduction modifiers Curr OpinImmunol 17 352ndash358

101 Just I et al (1995) Glucosylation of Rho proteins by Clostridiumdifficile toxin B Nature 375 500ndash503

102 Ohguchi K et al (1996) Effects of Clostridium difficile toxin A andtoxin B on phospholipase D activation in human promyelocyticleukemic HL60 cells Infect Immun 64 4433ndash4437

103 Goehring UM et al (1999) The N-terminal domain of Pseudomonasaeruginosa exoenzyme S is a GTPase-activating protein for RhoGTPases J Biol Chem 274 36369ndash36372

104 Black DS and Bliska JB (2000) The RhoGAP activity of theYersinia pseudotuberculosis cytotoxin YopE is required forantiphagocytic function and virulence Mol Microbiol 37 515ndash527

130

105 Von Pawel-Rammingen U et al (2000) GAP activity of the YersiniaYopE cytotoxin specifically targets the Rho pathway a mechanism fordisruption of actin microfilament structure Mol Microbiol 36 737ndash748

106 Fu Y and Galan JE (1999) A salmonella protein antagonizes Rac-1and Cdc42 to mediate host-cell recovery after bacterial invasionNature 401 293ndash297

107 Joneson T et al (1996) RAC regulation of actin polymerization andproliferation by a pathway distinct from Jun kinase Science 2741374ndash1376

108 Bhavsar AP et al (2013) The Salmonella type III effector SspH2specifically exploits the NLR co-chaperone activity of SGT1 to subvertimmunity PLoS Pathog 9 e1003518

109 Baruch K et al (2011) Metalloprotease type III effectors thatspecifically cleave JNK and NF-kappaB EMBO J 30 221ndash231

110 Yen H et al (2010) NleC a type III secretion protease compromises NF-kappaB activation by targeting p65RelA PLoS Pathog 6 e1001231

  • Detection of enteric pathogens by the nodosome
    • Distinguishing friend from foe in the gut
    • NOD proteins in pathogen detection and maintenance of gut immune homeostasis
    • Formation of the nodosome
    • Detection of bacterial virulence factors by the nodosome
    • Evolution of the NOD1 signaling pathway
    • Concluding remarks
    • Acknowledgments
    • Supplementary data
      • References

Review Trends in Immunology March 2014 Vol 35 No 3

50 Huang Z et al (2009) Structural insights into host GTPase isoformselection by a family of bacterial GEF mimics Nat Struct Mol Biol16 853ndash860

51 Bulgin RR et al (2009) EspT triggers formation of lamellipodia andmembrane ruffles through activation of Rac-1 and Cdc42 CellMicrobiol 11 217ndash229

52 Hardt WD et al (1998) S typhimurium encodes an activator of RhoGTPases that induces membrane ruffling and nuclear responses inhost cells Cell 93 815ndash826

53 Friebel A et al (2001) SopE and SopE2 from Salmonellatyphimurium activate different sets of RhoGTPases of the host cellJ Biol Chem 276 34035ndash34040

54 Arbeloa A et al (2010) EspM2 is a RhoA guanine nucleotide exchangefactor Cell Microbiol 12 654ndash664

55 Fukazawa A et al (2008) GEF-H1 mediated control of NOD1dependent NF-kappaB activation by Shigella effectors PLoSPathog 4 e1000228

56 Norris FA et al (1998) SopB a protein required for virulence ofSalmonella dublin is an inositol phosphate phosphatase Proc NatlAcad Sci USA 95 14057ndash14059

57 Zhou D et al (2001) A Salmonella inositol polyphosphatase acts inconjunction with other bacterial effectors to promote host cell actincytoskeleton rearrangements and bacterial internalization MolMicrobiol 39 248ndash259

58 Krause-Gruszczynska M et al (2011) The signaling pathway ofCampylobacter jejuni-induced Cdc42 activation role of fibronectinintegrin beta1 tyrosine kinases and guanine exchange factor Vav2Cell Commun Signal 9 32

59 Schmidt G et al (1997) Gln 63 of Rho is deamidated by Escherichiacoli cytotoxic necrotizing factor-1 Nature 387 725ndash729

60 Flatau G et al (1997) Toxin-induced activation of the G protein p21Rho by deamidation of glutamine Nature 387 729ndash733

61 Lerm M et al (1999) Deamidation of Cdc42 and Rac by Escherichiacoli cytotoxic necrotizing factor 1 activation of c-Jun N-terminalkinase in HeLa cells Infect Immun 67 496ndash503

62 Konkel ME et al (1999) Identification of proteins required for theinternalization of Campylobacter jejuni into cultured mammaliancells Adv Exp Med Biol 473 215ndash224

63 Rivera-Amill V and Konkel ME (1999) Secretion of Campylobacterjejuni Cia proteins is contact dependent Adv Exp Med Biol 473225ndash229

64 Malik-Kale P et al (2008) Culture of Campylobacter jejuni withsodium deoxycholate induces virulence gene expression JBacteriol 190 2286ndash2297

65 Konkel ME et al (2004) Secretion of virulence proteins fromCampylobacter jejuni is dependent on a functional flagellar exportapparatus J Bacteriol 186 3296ndash3303

66 Neal-McKinney JM and Konkel ME (2012) The Campylobacterjejuni CiaC virulence protein is secreted from the flagellum anddelivered to the cytosol of host cells Front Cell Infect Microbiol2 31

67 Eucker TP and Konkel ME (2012) The cooperative action ofbacterial fibronectin-binding proteins and secreted proteinspromote maximal Campylobacter jejuni invasion of host cells bystimulating membrane ruffling Cell Microbiol 14 226ndash238

68 Boehm M et al (2011) Major host factors involved in epithelial cellinvasion of Campylobacter jejuni role of fibronectin integrin beta1FAK Tiam-1 and DOCK180 in activating Rho GTPase Rac1 FrontCell Infect Microbiol 1 17

69 Chen LM et al (1996) Requirement of CDC42 for Salmonella-induced cytoskeletal and nuclear responses Science 274 2115ndash2118

70 Hobbie S et al (1997) Involvement of mitogen-activated proteinkinase pathways in the nuclear responses and cytokine productioninduced by Salmonella typhimurium in cultured intestinal epithelialcells J Immunol 159 5550ndash5559

71 Savkovic SD et al (1997) Activation of NF-kappaB in intestinalepithelial cells by enteropathogenic Escherichia coli Am J Physiol273 C1160ndashC1167

72 Zurawski DV et al (2008) The NleEOspZ family of effector proteinsis required for polymorphonuclear transepithelial migration acharacteristic shared by enteropathogenic Escherichia coli andShigella flexneri infections Infect Immun 76 369ndash379

73 Figueiredo JF et al (2009) Salmonella enterica Typhimurium SipAinduces CXC-chemokine expression through p38MAPK and JUNpathways Microbes Infect 11 302ndash310

74 Raymond B et al (2011) The WxxxE effector EspT triggersexpression of immune mediators in an ErkJNK and NF-kappaB-dependent manner Cell Microbiol 13 1881ndash1893

75 Schlumberger MC et al (2003) Amino acids of the bacterial toxinSopE involved in G nucleotide exchange on Cdc42 J Biol Chem 27827149ndash27159

76 Hoffmann C et al (2010) In macrophages caspase-1 activation bySopE and the type III secretion system-1 of S typhimurium canproceed in the absence of flagellin PLoS ONE 5 e12477

77 Muller AJ et al (2009) The S Typhimurium effector SopE inducescaspase-1 activation in stromal cells to initiate gut inflammation CellHost Microbe 6 125ndash136

78 Yoo NJ et al (2002) Nod1 a CARD protein enhances pro-interleukin-1beta processing through the interaction with pro-caspase-1 Biochem Biophys Res Commun 299 652ndash658

79 Haglund CM and Welch MD (2011) Pathogens and polymersmicrobe-host interactions illuminate the cytoskeleton J Cell Biol195 7ndash17

80 Patel JC and Galan JE (2005) Manipulation of the host actincytoskeleton by Salmonella ndash all in the name of entry Curr OpinMicrobiol 8 10ndash15

81 Celli J et al (2000) Enteropathogenic Escherichia coli (EPEC)attachment to epithelial cells exploiting the host cell cytoskeletonfrom the outside Cell Microbiol 2 1ndash9

82 Boquet P and Lemichez E (2003) Bacterial virulence factorstargeting Rho GTPases parasitism or symbiosis Trends Cell Biol13 238ndash246

83 Jones JD and Dangl JL (2006) The plant immune system Nature444 323ndash329

84 Stuart LM et al (2013) Effector-triggered versus pattern-triggeredimmunity how animals sense pathogens Nat Rev Immunol 13199ndash206

85 Stecher B et al (2007) Salmonella enterica serovar typhimuriumexploits inflammation to compete with the intestinal microbiotaPLoS Biol 5 2177ndash2189

86 Lupp C et al (2007) Host-mediated inflammation disrupts theintestinal microbiota and promotes the overgrowth ofEnterobacteriaceae Cell Host Microbe 2 119ndash129

87 Winter SE et al (2013) Host-derived nitrate boosts growth of E coliin the inflamed gut Science 339 708ndash711

88 Lopez CA et al (2012) Phage-mediated acquisition of a type IIIsecreted effector protein boosts growth of salmonella by nitraterespiration MBio 3 e00143-12

89 Winter SE et al (2010) Gut inflammation provides a respiratoryelectron acceptor for Salmonella Nature 467 426ndash429

90 Lawley TD et al (2008) Host transmission of Salmonella entericaserovar Typhimurium is controlled by virulence factors andindigenous intestinal microbiota Infect Immun 76 403ndash416

91 Bonardi V et al (2012) A new eye on NLR proteins focused on clarityor diffused by complexity Curr Opin Immunol 24 41ndash50

92 Staskawicz BJ et al (2001) Common and contrasting themes ofplant and animal diseases Science 292 2285ndash2289

93 Pinheiro VB and Ellar DJ (2006) How to kill a mocking bug CellMicrobiol 8 545ndash557

94 Choe KM et al (2002) Requirement for a peptidoglycan recognitionprotein (PGRP) in Relish activation and antibacterial immuneresponses in Drosophila Science 296 359ndash362

95 Takehana A et al (2002) Overexpression of a pattern-recognitionreceptor peptidoglycan-recognition protein-LE activates imdrelish-mediated antibacterial defense and the prophenoloxidase cascade inDrosophila larvae Proc Natl Acad Sci USA 99 13705ndash13710

96 Georgel P et al (2001) Drosophila immune deficiency (IMD) is adeath domain protein that activates antibacterial defense and canpromote apoptosis Dev Cell 1 503ndash514

97 Dushay MS et al (1996) Origins of immunity relish a compoundRel-like gene in the antibacterial defense of Drosophila Proc NatlAcad Sci USA 93 10343ndash10347

98 Stuart LM and Boyer L (2013) RhoGTPases ndash NODes for effector-triggered immunity in animals Cell Res 23 980ndash981

129

Review Trends in Immunology March 2014 Vol 35 No 3

99 Dziarski R and Gupta D (2010) Review mammalian peptidoglycanrecognition proteins (PGRPs) in innate immunity Innate Immun 16168ndash174

100 Murray PJ (2005) NOD proteins an intracellular pathogen-recognition system or signal transduction modifiers Curr OpinImmunol 17 352ndash358

101 Just I et al (1995) Glucosylation of Rho proteins by Clostridiumdifficile toxin B Nature 375 500ndash503

102 Ohguchi K et al (1996) Effects of Clostridium difficile toxin A andtoxin B on phospholipase D activation in human promyelocyticleukemic HL60 cells Infect Immun 64 4433ndash4437

103 Goehring UM et al (1999) The N-terminal domain of Pseudomonasaeruginosa exoenzyme S is a GTPase-activating protein for RhoGTPases J Biol Chem 274 36369ndash36372

104 Black DS and Bliska JB (2000) The RhoGAP activity of theYersinia pseudotuberculosis cytotoxin YopE is required forantiphagocytic function and virulence Mol Microbiol 37 515ndash527

130

105 Von Pawel-Rammingen U et al (2000) GAP activity of the YersiniaYopE cytotoxin specifically targets the Rho pathway a mechanism fordisruption of actin microfilament structure Mol Microbiol 36 737ndash748

106 Fu Y and Galan JE (1999) A salmonella protein antagonizes Rac-1and Cdc42 to mediate host-cell recovery after bacterial invasionNature 401 293ndash297

107 Joneson T et al (1996) RAC regulation of actin polymerization andproliferation by a pathway distinct from Jun kinase Science 2741374ndash1376

108 Bhavsar AP et al (2013) The Salmonella type III effector SspH2specifically exploits the NLR co-chaperone activity of SGT1 to subvertimmunity PLoS Pathog 9 e1003518

109 Baruch K et al (2011) Metalloprotease type III effectors thatspecifically cleave JNK and NF-kappaB EMBO J 30 221ndash231

110 Yen H et al (2010) NleC a type III secretion protease compromises NF-kappaB activation by targeting p65RelA PLoS Pathog 6 e1001231

  • Detection of enteric pathogens by the nodosome
    • Distinguishing friend from foe in the gut
    • NOD proteins in pathogen detection and maintenance of gut immune homeostasis
    • Formation of the nodosome
    • Detection of bacterial virulence factors by the nodosome
    • Evolution of the NOD1 signaling pathway
    • Concluding remarks
    • Acknowledgments
    • Supplementary data
      • References

Review Trends in Immunology March 2014 Vol 35 No 3

99 Dziarski R and Gupta D (2010) Review mammalian peptidoglycanrecognition proteins (PGRPs) in innate immunity Innate Immun 16168ndash174

100 Murray PJ (2005) NOD proteins an intracellular pathogen-recognition system or signal transduction modifiers Curr OpinImmunol 17 352ndash358

101 Just I et al (1995) Glucosylation of Rho proteins by Clostridiumdifficile toxin B Nature 375 500ndash503

102 Ohguchi K et al (1996) Effects of Clostridium difficile toxin A andtoxin B on phospholipase D activation in human promyelocyticleukemic HL60 cells Infect Immun 64 4433ndash4437

103 Goehring UM et al (1999) The N-terminal domain of Pseudomonasaeruginosa exoenzyme S is a GTPase-activating protein for RhoGTPases J Biol Chem 274 36369ndash36372

104 Black DS and Bliska JB (2000) The RhoGAP activity of theYersinia pseudotuberculosis cytotoxin YopE is required forantiphagocytic function and virulence Mol Microbiol 37 515ndash527

130

105 Von Pawel-Rammingen U et al (2000) GAP activity of the YersiniaYopE cytotoxin specifically targets the Rho pathway a mechanism fordisruption of actin microfilament structure Mol Microbiol 36 737ndash748

106 Fu Y and Galan JE (1999) A salmonella protein antagonizes Rac-1and Cdc42 to mediate host-cell recovery after bacterial invasionNature 401 293ndash297

107 Joneson T et al (1996) RAC regulation of actin polymerization andproliferation by a pathway distinct from Jun kinase Science 2741374ndash1376

108 Bhavsar AP et al (2013) The Salmonella type III effector SspH2specifically exploits the NLR co-chaperone activity of SGT1 to subvertimmunity PLoS Pathog 9 e1003518

109 Baruch K et al (2011) Metalloprotease type III effectors thatspecifically cleave JNK and NF-kappaB EMBO J 30 221ndash231

110 Yen H et al (2010) NleC a type III secretion protease compromises NF-kappaB activation by targeting p65RelA PLoS Pathog 6 e1001231

  • Detection of enteric pathogens by the nodosome
    • Distinguishing friend from foe in the gut
    • NOD proteins in pathogen detection and maintenance of gut immune homeostasis
    • Formation of the nodosome
    • Detection of bacterial virulence factors by the nodosome
    • Evolution of the NOD1 signaling pathway
    • Concluding remarks
    • Acknowledgments
    • Supplementary data
      • References