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Model of Stomatal Conductance in Larrea tridentata : A Case Study Photosynthesis depends on variable water status of plant (Fig. 3). Predawn water potential (y) often used as an indicator of plant water status, instantaneous measures would be more accurate. Don’t often have these data. - PowerPoint PPT Presentation
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Great BasinMojaveSonoranChihuahuan
CA
NV
AZ NM
TX
Mexico
CO
UT
WY
ID
OR
SRER
BBNP
NTS
VESR
Great BasinMojaveSonoranChihuahuan
Great BasinMojaveSonoranChihuahuan
CA
NV
AZ NM
TX
Mexico
CO
UT
WY
ID
OR
SRER
BBNP
NTS
VESR
Figure 1. Distributions of the four major deserts in the Southwest, and locations of the five field sites contributing data to this synthesis project. Sites are: (i) the Valentine Eastern Sierra Reserve (VESR), PI = Michael Loik, (ii) the Nevada Test Site (NTS), PI = Stan Smith, (iii) the Santa Rita Experimental Range (SRER) and the San Pedro River Basin (SPRB), PI = Travis Huxman, and (iv) the Big Bend National Park (BBNP), PI = David Tissue.
Understanding the effects of altered precipitation on arid and semiarid plants and ecosystems: A Bayesian synthesis
Background The intensity, frequency, and variability in the timing of precipitation events are predicted to increase in the southwestern United States over the next few decades. Arid and semi-arid lands are particularly sensitive to altered precipitation regimes and other hypothesized effects of climate change. No quantitative syntheses have been carried-out with data related to the effects of precipitation change on arid or semiarid ecosystems and our current understanding of how the potential responses of plants, soils, and microbial communities will affect carbon and water fluxes is particularly lacking. The objectives of this project are to synthesize existing data related to carbon and water fluxes from leaves to the ecosystem level across the four major deserts of the Southwest. Several research groups are exploring the effects of altered precipitation regimes on ecosystems of the Southwest. Collaborators Huxman, Loik, Smith, and Tissue have and continue to conduct field studies, including precipitation manipulations, that emphasize the effects of variation in pulse, seasonal, and annual precipitation on C (carbon) and H20 (water) dynamics. These studies span sites located in the four major deserts of the Southwest (Fig. 1), and they have produced enormous quantities of data representing different spatial, temporal, and biological scales.
Richard W. Lucas and Kiona OgleBotany Dept, University of Wyoming
[email protected] [email protected]
Advantages of a Bayesian Approach
• Bayesian hierarchical modeling. The Bayesian method explicitly link the diverse data sources with the mechanistic models (Fig. 2). The Bayesian model decomposes the data-model synthesis problem into a probabilistic hierarchical framework.• Mechanistic models. Data can be analyzed within the context of mechanistic models that represent processes operating at different scales. The models contain ecologically-meaningful parameters that provide important insights into how precipitation variability controls C and H2O dynamics in deserts of the Southwest.
Figure 2. A simple hierarchical Bayesian model that couples diverse field data and mechanistic models related to leaf, soil, and ecosystem carbon dynamics. Field data are categorized as stochastic or covariates (i.e., assume measured without error). Stochastic variables arise from distributions whose means are defined by the latent processes. The latent processes represent the “truth” or unobserved quantities, and they are informed by the mechanistic models.
Covariates
Data
Stochastic
Latent processes
Parameters
Hyper- parameters
NEEObs Net ecosystem
exchange
LAI Leaf area
index
RsObs Soil
respiration
B Root & microbial
biomass
AObs,
Instantaneous photosynthesis
C Environmental
covariates
SWC Soil water
content
NEE Net ecosystem exchange
Rs Soil respiration
A
Instantaneous photosynthesis
ATot Total daily photosynthesis
r
Instantaneous source-specific respiration
NEE NEE obs.
error variance
Rs Rs obs.
error variance
A A obs. error
variance
A site parameters
A species parameters
r site parameters
r source parameters
a1 a2 b1 b2 a1 a2 b1 b2
Ts Soil
temperature
Population effects (Parameters describing distributions from which site-, species-, and source-specific effects arise)
Model of Stomatal Conductance in Larrea tridentata: A Case Study
• Photosynthesis depends onvariable water status of plant (Fig. 3).• Predawn water potential often usedas an indicator of plant water status,instantaneous measures would be more accurate. Don’t often have these data.• Hierarchical Bayesian model can be used to predict instantaneous as a latent variable (Figs. 3 & 4).
• Modeling instantaneous as alatent variable gives improvedresult (Fig 4).• The finding that control plants have lower stomatal conductancethan watered plants (Fig. 5) offers support for the hypothesis that L. tridentate is successful in arid systems partially because of its ability to tightly regulate its stomatal water loss during periods of water stress.
Figure 3.
Figure 4.
Figure 5.
WP estimates from Winbugs
Predicted conductance
-0.05 0.00 0.05 0.10 0.15 0.20 0.25 0.30
Obs
erve
d co
nduc
tanc
e
0.00
0.05
0.10
0.15
0.20
0.25
0.30
controlwatered1:1 line
Predawn WP
Predicted conductance
0.00 0.05 0.10 0.15 0.20 0.25 0.30
controlwatered1:1 line
r2 = 0.59r2 = 0.67
Stomatal Conductance of Control and Watered Plants
VPD (kPa)
0 2 4 6 8 10 12 14
cond
ucta
nce
(mol
m-2
s-1
)
-0.02
0.00
0.02
0.04
0.06
0.08
0.10
0.12
0.14
0.16
0.18
Watered PlantsControl Plants
Photosynthesis depends in
Photosynthesis depends in
part on stomatal conductance
part on stomatal conductance
