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CHARACTERIZING AQP9: A REGULATOR OF EPIPHYSEAL PLATE CHONDROCYTE PROLIFERATION, HYPERTROPHY, AND LONG BONE GROWTH by Pontius Pu Tian Tang A thesis submitted in conformity with the requirements for the degree of Master of Science Institute of Medical Science University of Toronto © Copyright by Pontius Pu Tian Tang (2018)

CHARACTERIZING AQP9: A REGULATOR OF ......ii Abstract Characterizing Aqp9: a regulator of epiphyseal plate chondrocyte proliferation, hypertrophy, and long bone growth Pontius Pu Tian

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Page 1: CHARACTERIZING AQP9: A REGULATOR OF ......ii Abstract Characterizing Aqp9: a regulator of epiphyseal plate chondrocyte proliferation, hypertrophy, and long bone growth Pontius Pu Tian

CHARACTERIZING AQP9: A REGULATOR OF

EPIPHYSEAL PLATE CHONDROCYTE PROLIFERATION,

HYPERTROPHY, AND LONG BONE GROWTH

by

Pontius Pu Tian Tang

A thesis submitted in conformity with the requirements

for the degree of Master of Science

Institute of Medical Science

University of Toronto

© Copyright by Pontius Pu Tian Tang (2018)

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Abstract

Characterizing Aqp9: a regulator of epiphyseal plate

chondrocyte proliferation, hypertrophy, and long bone growth

Pontius Pu Tian Tang

Master of Science

Institute of Medical Science

University of Toronto

2018

Aquaporin-9 (AQP9) is a membrane channel protein suspected to regulate growth in the

epiphyseal plate. As long bone defects often possess limited non-surgical options, novel factors

underlying bone growth must be continuously explored to advance effective treatments. I

hypothesized that Aqp9 is an important epiphyseal plate chondrocyte channel regulating the

process of endochondral ossification. In this study, Aqp9 -/- mouse long bones compared to

wildtype mouse long bones showed a neonatal hindlimb-specific acceleration of growth followed

by reduced length in the juvenile age. Analysis of Aqp9 -/- epiphyseal plates and chondrocytes

showed an early disposition for proliferation and aversion from hypertrophy, suggesting that

Aqp9 may function similarly to genes such as Col10a1 and Mmp13. This study provides insight

into chondrocyte membrane channel proteins and their regulation of the growing epiphyseal

plate, demonstrating that Aqp9 may be a novel therapeutic target for the non-invasive

intervention of leg length discrepancies.

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Acknowledgements

I would like to take this opportunity to thank everyone who has helped me throughout my

degree. Firstly, I would like to express my gratitude to my supervisor, Dr. Peter Kannu, for

granting me the opportunity to dive into graduate work and explore a novel protein in a state-of-

the-art facility. Secondly, I would like to thank my Program Advisory Committee members, Dr.

Brian Ciruna and Dr. Marco Magalhaes, for their insight and constructive criticism.

I would like to thank our associate Kashif Ahmed for guiding me through the basics of cell

culture, our MSc candidate Liliana Vertel for assisting greatly with mouse management and

dissection, our previous lab technician Angela Weng for establishing preliminary findings in the

Aqp9 project, our colleague Raymond Poon for providing incredible guidance with genotyping

and mouse work, previous summer students with the Alman lab for assisting with supporting

research, our colleagues in the Alman lab for providing guidance with basic techniques, our

summer students William Xie and Lisa Vi for assistance with cell culture and sectioning,

members of the Wall lab for sharing equipment, and members of the Justice lab for sharing

helpful reagents. I would also like to thank The Centre for Phenogenomics for assistance with

cage maintenance and reminders for mouse weaning and health conditions.

On a personal note, I would like to thank my family and friends for their continuous support and

encouragement. I would also like to thank Michael Liang for guidance with data interpretation,

Nicole Park for assistance with bioinformatic and literature searches, Mushriq Al-Jazrawe for

introductory tips on laboratory work, and Neeti Vashi for guidance with qPCR analysis, and Erin

Chown for guidance with writing and thesis defense.

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Table of Contents

Acknowledgements........................................................................................................................ iii

Table of Contents ............................................................................................................................ iv

List of Abbreviations .....................................................................................................................vii

List of Tables ................................................................................................................................... x

List of Figures .................................................................................................................................. x

Chapter 1: Introduction .................................................................................................................... 1

1.1 An overview of endochondral ossification and epiphyseal plate regulation ................. 1

1.2 Models of differential long bone growth ..................................................................... 19

1.3 Aquaporins and chondrocytes: expression, function, and regulation .......................... 25

1.4 Characterization of AQP9 and its novel role in chondrocyte and bone activity .......... 30

1.5 Aqp9 -/-: an accessible knockout mouse model for epiphyseal chondrocyte and bone

length investigation ............................................................................................................ 43

1.6 Aqp9 has a novel function in cartilage and murine long bone growth ........................ 45

Chapter 2: Research Aims, Hypothesis, and Summary Plan ......................................................... 49

2.1 Rationale ...................................................................................................................... 49

2.2 Hypothesis ................................................................................................................... 49

2.3 Objectives .................................................................................................................... 50

2.4 Clinical significance .................................................................................................... 51

2.5 Cellular mechanisms .................................................................................................... 51

Chapter 3: Methods........................................................................................................................ 53

3.1 Mouse creation, maintenance, genotyping, and age selection ..................................... 53

3.2 In situ hybridization ..................................................................................................... 53

3.3 Skeletal staining ........................................................................................................... 54

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3.4 Staining and immunohistochemistry of epiphyseal plates........................................... 54

3.5 Visualization and measurement of limbs and epiphyseal plates ................................. 55

3.6 Primary chondrocyte culture, qPCR, and RNA silencing ........................................... 56

3.7 Statistical analyses ....................................................................................................... 57

Chapter 4: Results .......................................................................................................................... 58

4.1 Body weight and superficial comparisons of WT and Aqp9 -/- mice.......................... 58

4.2 Histological analysis of Aqp9 expression in the developing epiphyseal plate ............ 63

4.3 Skeletal staining of P5 WT and Aqp9 -/- mice ............................................................ 65

4.4 Skeletal staining of P21 WT and Aqp9 -/- mice .......................................................... 72

4.5 Histological analysis of P5 WT and Aqp9 -/- epiphyseal plates .................................. 79

4.6 Immunohistochemistry of P21 WT and Aqp9 -/- epiphyseal plates ............................ 84

4.7 Analysis of old WT and Aqp9 -/- epiphyseal plates .................................................... 87

4.8 Histological analysis of embryonic WT and Aqp9 -/- epiphyseal plates ..................... 90

4.9 Cell proliferation analysis of P5 WT, Aqp9 +/-, and Aqp9 -/- epiphyseal plate

chondrocytes ...................................................................................................................... 93

4.10 Gene expression analysis of P5 WT, Aqp9 +/-, and Aqp9 -/- epiphyseal plate

chondrocytes ...................................................................................................................... 95

4.11 Silencing of Aqp9 in P5 WT epiphyseal plate chondrocytes ..................................... 97

Chapter 5: Discussion .................................................................................................................... 99

5.1 Aqp9 temporally influences hindlimb length ............................................................. 100

5.2 Epiphyseal plate irregularities underscore Aqp9-mediated bone length.................... 108

5.3 Aqp9 mutant chondrocytes show a differential phenotype ........................................ 116

5.4 A model for Aqp9 function in murine endochondral ossification ............................. 122

Chapter 6: Conclusions ................................................................................................................ 126

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Chapter 7: Future Directions ....................................................................................................... 128

7.1 In situ hybridization of Aqp9 during mesenchymal condensation............................. 128

7.2 Histomorphometry of WT and Aqp9 -/- long bones .................................................. 129

7.3 Flow cytometry cell cycle analysis ............................................................................ 130

7.4 RNA-sequencing of WT, Aqp9 +/-, and Aqp9 -/- primary epiphyseal plate

chondrocytes .................................................................................................................... 131

7.5 Therapeutic strategies ................................................................................................ 132

Appendix...................................................................................................................................... 159

Statement of Contributions .............................................................................................. 159

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List of Abbreviations

A Adenine

Adam A disintegrin and metalloproteinase

Akt Protein kinase B

Aqp Aquaporin

AQPap Human aquaporin adipose

ARE Androgen response element

Atf AMP-dependent transcription factor

Bgp Osteocalcin

Bmp Bone morphogenetic protein

Bsp Bone sialoprotein

C Cytosine

CACNA1H Calcium Voltage-Gated Channel Subunit Alpha1 H

CD Cluster of differentiation

CDH2 Cadherin-2

Cdk Cyclin-dependent kinase

cDNA Complementary DNA

CHIP Channel-forming integral protein

CHO Chinese hamster ovary

Col10a1 Collagen, type X, alpha 1

Col1a1 Collagen, type 1, alpha 1

Col2a1 Collagen, type II, alpha 1

DAB Diaminobenzidine

DEPC Diethyl pyrocarbonate

DIG Digoxigenin

Dkk Dickkopf-related protein

DMSO Dimethyl sulfoxide

DNA Deoxyribonucleic acid

DSLR Digital single-lens reflex

E. coli Escherichia coli

ECM Extracellular matrix

EDNRB Endothelin B receptor

EDTA Ethylenediaminetetraacetic acid

EMSA Electrophoretic mobility shift assay

ERE Estrogen response element

Fgf Fibroblast growth factor

G Guanine

GDF Growth/differentiation factor

GH Growth hormone

GlpF Glycerol uptake facilitator protein

GLUT4 Glucose transporter type 4

H&E Hematoxylin and Eosin

H2O2 Hydrogen peroxide

HB Helix B

HE Helix E

HIF Hypoxia-inducible factors

Hox Homeobox

Hp1bp3 Heterochromatin protein 1, binding protein 3

HRP Horseradish peroxidase

HSC Hematopoietic stem cell

IGF-1 Insulin-like growth factor 1

Ihh Indian hedgehog

IL Interleukin

IRE Insulin response element

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KCNB1 Potassium voltage-gated channel, Shab-related subfamily, member 1

KOH Potassium hydroxide

Lepr Leptin receptor

LLD Leg Length Discrepancy

MAPK Mitogen-activated protein kinase

Matn Matrilin

MCDS Metaphyseal Chondrodysplasia Schmid Type

MEM Minimum Essential Medium

MKRN3 Makorin ring finger protein 3

Mmp13 Matrix metallopeptidase 13

mRNA Messenger RNA

MSC Mesenchymal stem cell

mTOR Mammalian target of rapamycin

AMPK AMP-activated protein kinase

N-CAM Neural cell adhesion molecule

Nfat Nuclear factor of activated T-cells

NPA Asn-Pro-Ala

Npr Natriuretic peptide receptor

OARSI Osteoarthritis Research Society International

Osx Osterix

Panx Pannexin

PBS Phosphate-buffered saline

PCR Polymerase chain reaction

PEPCK Phosphoenolpyruvate carboxykinase

PF4V1 Platelet factor 4 variant 1

PFA Paraformaldehyde

pH Power of hydrogen

PI3K Phosphoinositide 3-kinase

PKC Protein kinase C

Prx1 Paired related homeobox 1

PTHrP Parathyroid hormone-related protein

PTP Protein tyrosine phosphatase

qPCR Quantitative polymerase chain reaction

RANK-L Receptor activator of nuclear factor kappa-Β ligand

RNA Ribonucleic acid

ROI Region of Interest

ROS Reactive oxygen species

Rspo R-spondin

RT-PCR Reverse transcription polymerase chain reaction

Runx Runt-related transcription factor

SDS Sodium dodecyl sulfate

Shh Sonic hedgehog

Shox Short stature homeobox

siRNA Silencing RNA

Smad "small" "Mothers Against Decapentaplegic"

Sox Sry-related HMG box

Spred2 Sprouty-related, EVH1 domain-containing protein 2

SSC Saline-sodium citrate

Stat1 Signal transducer and activator of transcription 1

T Thymine

Tak1 Transforming growth factor beta-activated kinase 1

TBST Tris-buffered saline, polysorbate 20

Tbx T-box

TCP The Centre for Phenogenomics

TEA Triethylamine

Tgf Transforming growth factor

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TNE Tris, EDTA, NaCl

TonEBP Tonicity-responsive enhancer binding protein

TRPM7 Transient receptor potential cation channel subfamily M member 7

TRPV4 Transient receptor potential cation channel subfamily V member 4

VEGF Vascular endothelial growth factor

VILO Variable input, linear output

Wnt Wingless-related integration site

WT Wildtype

Yap Yes-associated protein

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List of Tables

Table 1.1 Models of differential bone growth ............................................................................... 24

Table 5.1 Primary epiphyseal plate chondrocyte proliferation rates (48-96 hours) .................... 117

List of Figures

Figure 1.1 Mesenchymal condensation ........................................................................................... 5

Figure 1.2 Early chondrogenesis ..................................................................................................... 8

Figure 1.3 Chondrocyte proliferation, columnar formation, and pre-hypertrophy........................ 11

Figure 1.4 Chondrocyte hypertrophy ............................................................................................. 14

Figure 1.5 Ossification and long bone growth .............................................................................. 18

Figure 1.6 AQP9 protein structure................................................................................................. 33

Figure 1.6 cont. .............................................................................................................................. 35

Figure 1.7 Expression and regulation of AQP9 ............................................................................. 38

Figure 4.1 Body weight and superficial comparisons of WT and Aqp9 -/- mice .......................... 59

Figure 4.2 Histological analysis of Aqp9 expression in the developing epiphyseal plate ............. 65

Figure 4.3 Skeletal staining of P5 WT and Aqp9 -/- mice ............................................................. 67

Figure 4.4 Skeletal staining of P21 WT and Aqp9 -/- mice ........................................................... 74

Figure 4.5 Histological analysis of P5 WT and Aqp9 -/- epiphyseal plates .................................. 82

Figure 4.6 Immunohistochemistry of P21 WT and Aqp9 -/- epiphyseal plates ............................ 86

Figure 4.7 Analysis of old WT and Aqp9 -/- epiphyseal plates ..................................................... 89

Figure 4.8 Histological analysis of embryonic WT and Aqp9 -/- epiphyseal plates ..................... 92

Figure 4.9 Cell proliferation analysis of P5 WT, Aqp9 +/-, and Aqp9 -/- epiphyseal plate

chondrocytes .................................................................................................................................. 95

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Figure 4.10 Gene expression analysis of P5 WT, Aqp9 +/-, and Aqp9 -/- epiphyseal plate

chondrocytes .................................................................................................................................. 97

Figure 4.11 Silencing of Aqp9 in P5 WT epiphyseal plate chondrocytes ..................................... 99

Figure 5.1 A model for Aqp9 function in murine endochondral ossification ............................. 125

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1 Introduction

The epiphyseal plate is a region of growing tissue near the ends of long bones in children and

adolescents (Mirtz, Chandler, & Eyers, 2011). It is an exceptional model for understanding

genetic mechanisms that underlie long bone development because it is:

1) The foremost location where long bone grows,

2) Easily visualized and accessible,

3) Regulated by a myriad of genes, and

4) Organized in specific zones with remarkable cell function and morphology.

Numerous studies have provided information on the mechanisms governing long bone growth.

Sectioning of multispecies epiphyseal plates and histological analyses paved the way for several

of the basic structures recognized today, such as the epiphyseal plate zones. The

characterizations of simple elements—such as chondrocytes; the primary cellular unit of

epiphyseal plate cartilage—were critical towards a richer understanding of long bone

development (Brighton, Sugioka, & Hunt, 1973). These studies further led to the investigation of

spatiotemporal markers at each zone during skeletal morphogenesis, including the expression of

now-familiar genes Ihh and Bmp-6 (Iwasaki, Le, & Helms, 1997). This process has been

accelerated by the advent of mutant mouse models, which have revealed the functional role of

specific genes contributory to long bone development. Currently, the challenge is to understand

the interaction of novel genes and pathways that coordinate in the epiphyseal plate to control cell

proliferation, progression into cellular hypertrophy, and ultimately extend long bone length. In

particular, transmembrane residents of the channelome—the diverse set of ion channels and

pores on the chondrocyte membrane—are emerging as targets to further understand cartilage and

bone biology (Barrett-Jolley, Lewis, Fallman, & Mobasheri, 2010).

1.1 An overview of endochondral ossification and epiphyseal plate

regulation

Osseous tissues in the mammalian skeleton are formed through two different processes—

intramembranous ossification and endochondral ossification (Berendsen & Olsen, 2015). In the

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former, osteoblasts derived from mesenchymal cells during embryonic skeletal development

secrete osteoid that eventually calcify and form mature bone matrix (Lefebvre & Bhattaram,

2010). This process gives rise to flat bones, the majority of cranial bones, and the clavicles. In

contrast, endochondral ossification creates the long bones of the body by replacing hyaline

cartilage (Mackie, Ahmed, Tatarczuch, Chen, & Mirams, 2008). Here, mesenchymal cells

condense and differentiate into chondrocytes that secrete matrix, proliferate, undergo

hypertrophy, and expire sequentially to allow osteoblast and vascular invasion. Bone matrix is

formed at the epiphyseal plate until the primary and secondary centres of ossification join and

prevent further growth (Ortega, Behonick, & Werb, 2004).

This process is tightly regulated and dictates the skeletal structure of the individual, impacting

their appearance, health, and quality of life. Examining the structures and regulatory markers

present during each step of murine endochondral ossification will entrench an understanding of

the known factors important to long bone growth—as well as provide insight into novel

contributory genes.

1.1.1 Mesenchymal condensation (see Figure 1.1)

Endochondral ossification commences with the migration of mesenchymal cells from the lateral

plate mesoderm and subsequent condensation at the respective limb field (Long & Ornitz, 2013).

Initiating limb outgrowth requires T-box transcription factors such as Tbx5 in the forelimb and

Tbx4 in the hindlimb to establish fibroblast growth factor (FGF) gene expression and eventual

chondrogenesis (Nishimoto & Logan, 2016). This embryonic process occurs as early as E9.5-

10.5 in the murine limb bud and sets the foundation for later chondrogenic differentiation and

production of early chondrocyte-specific extracellular matrix (ECM) products such as Col2a1

and aggrecan (Hata, Takahata, Murakami, & Nishimura, 2017). At this stage, the mesenchymal

cells are tightly packed and rely on body-plan genes such as Hox to direct their condensation

position. Expression of Hox10 guides growth of the proximal long bone—such as the femur—

and expression of Hox11 guides the distal long bone—such as the tibia (Rux & Wellik, 2017). A

member of the Hedgehog signalling pathway, Shh, is expressed in the posterior margin of the

limb bud—named the zone of polarizing activity—to guide appropriate anterior-posterior

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patterning of the developing limb (Yang, Andre, Ye, & Yang, 2015). While the evolutionary

background of appendicular skeleton development requires further investigation, genes important

to future chondrogenic maturation also play a role in driving initial mesenchymal condensation.

Bone morphogenetic proteins (BMPs) are part of the transforming growth factor-β (TGF- β)

family and play fundamental roles in embryonic skeletal development (Beederman et al., 2013).

BMPs bind to serine/threonine kinase receptors, inducing their phosphorylation, which then

phosphorylate SMAD proteins that can complex with SMAD4 and enter the nucleus to perform

transcriptional activation of genes such as CDH2 to synthesize N-cadherin (Massagué, Seoane,

& Wotton, 2005; Wang, Zhao, & Zhang, 2017). Both N-cadherin and N-CAM are proteins

responsible for cell-to-cell adhesion during mesenchymal condensation, as driven by the BMP-

SMAD pathway (DeLise, Fischer, & Tuan, 2000). The modern consensus is that BMP signalling

is required for mesenchymal cells to form necessary small aggregates and cluster into

condensations with definite boundaries for later chondrogenic differentiation (Barna &

Niswander, 2007). BMP2 and BMP4 are two such explored genes that are required for proper

long bone formation (Bandyopadhyay et al., 2006). Later genes such as Sox9 are necessary for

chondrogenesis but rely on BMP signalling to maintain the condensation aggregate, as Sox9

alone is insufficient to rescue chondrocyte formation in Smad4-deficient embryos (Akiyama,

Chaboissier, Martin, Schedl, & de Crombrugghe, 2002; Lim et al., 2015).

Amidst the importance of BMPs, fibroblast growth factors (FGFs) are also necessary precursors

to condensation formation. FGFR1-4 in both mice and humans are cell surface tyrosine kinase

receptors that bind FGF and phosphorylate important downstream pathways involving MAPK,

PI3K, STAT1, and PKC (Turner & Grose, 2010). Primarily, FGFR1 and 2 are expressed widely

in limb bud mesenchyme prior to condensation and their deletion from the limb bud produces

diminished skeletal products (Peters, Werner, Chen, & Williams, 1992; Yu et al., 2003). FGF

signalling in the mesenchyme provides essential cell survival signals during pre-condensation, as

well as in subsequent chondrogenic differentiation (Sun, Mariani, & Martin, 2002).

Condensation may ultimately rely on mechanical factors such as ion channels, cilia, and the

cytoskeleton for mesenchymal cells to communicate (Hughes et al., 2018). The presence of

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mechanosensitive calcium channels such as TRPM7 and potassium channels such as KCNB1 in

mesenchymal cell membranes highlight specific proteins through which condensation may be

initiated (Xiao, Chen, & Zhang, 2016; Pillozzi & Becchetti, 2012). Hence, even the earliest stage

of long bone growth—at the limb bud—may require channelome members to progress toward

chondrogenesis. At this stage, mesenchymal cells have formed the cartilage anlage necessary for

further chondrocytic differentiation and eventual ossification.

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Figure 1.1. Mesenchymal condensation

Developing

embryo

Developing

Forelimb

Tbx4

Tbx5

Lateral plate

mesoderm

Developing

Hindlimb

Developing digitsHox10 Hox11

Limb bud

Zone of

polarizing

activity

Shh

Condensing

mesenchymal

cells

BMPs

SMADs

> N-cadherin

> N-CAM

FGFs

> MAPK

> PI3K

> STAT1

> PKC

TRPM7

KCNB1

Other channelome proteins…

Encourage

survival,

promote cell-to-

cell adhesion,

and guide

condensation

5

Mesenchymal cell

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1.1.2 Early chondrogenesis (see Figure 1.2)

After condensation, mesenchymal cells in the core of the anlage can differentiate into early

chondrocytes by committing to a chondrogenic fate (Somoza, Welter, Correa, & Caplan, 2014).

These pre-chondrocytes cease production of adhesion molecules and begin secreting cartilage

matrix including collagen types II, IX, and XI into the extracellular space. As these cells migrate

towards the anlage periphery, a portion commit to the osteogenic fate and form the

perichondrium that surrounds the developing epiphyseal plate (Lefebvre & Bhattaram, 2010).

Three main proteins drive early chondrogenesis—Sox5, Sox6, and Sox9 (Smits et al., 2001;

Akiyama et al., 2002). This trio performs cooperative binding at the promoter regions of the

aforementioned matrix genes to drive transcription and protein synthesis. Sox5 and Sox6 share

similar promoter-binding capacities and act in concert, but Sox9 is expressed upstream and acts

earlier than the two in chondrogenesis. In fact, homozygous deletion of murine Sox9 in early

chondrocytes completely prevents chondrocytic differentiation, whereas deletion of Sox5 and

Sox6 only diminishes differentiation (Bi, Deng, & Zhang, 1999). Overall, early chondrogenesis

relies on the Sox triad greatly—but other factors are necessary as Sox does not function uniquely

in the chondrocytic lineage (Han & Lefebvre, 2008).

BMP signalling is necessary for the Sox trio to function (Yoon et al., 2005). Without BMP1

receptors and their downstream SMAD modules, chondrogenic cells fail to activate Col2a1 and

differentiate, resulting in severe dysplasia—a dramatic dysregulation of skeletal stature (Retting,

Song, Yoon, & Lyons, 2009). FGF is also a transcriptional enhancer of Sox9, where FGFR1-4

are capable of increasing its expression (Murakami, Kan, McKeehan, & de Crombrugghe, 2000).

However, members of the Wnt/β-catenin pathway inhibit differentiation and overexpression of

β-catenin signaling can a) reroute chondrogenic cells to soft connective tissue formation, b)

inhibit Sox9 activity, and c) result in achondrodysplasia, or dwarfism (ten Berge, Brugmann,

Helms, & Nusse, 2008; Hill, Spater, Taketo, Birchmeier, & Hartmann, 2005; Akiyama et al.,

2004). Furthermore, ectopic Notch signalling suppresses chondrogenesis through binding of the

Notch Intracellular Domain and suppression of Sox9 in the budding limb (Mead & Yutzey,

2009). Evidently, Sox9 is an important transcription factor in early chondrogenesis.

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In relation to the channelome, cation channels such as TRPV4 can be pharmacologically

activated to artificially raise Sox9 reporter activity (Muramatsu et al., 2007). Removal of calcium

channels such as CACNA1H in cartilage is also able to attenuate Sox9 expression (Lin et al.,

2014). As pre-chondrocytes gradually differentiate into primordial chondrocytes, their membrane

proteome likely evolves in channel expression to reflect the impending need for robust

proliferation, volume expansion, and calcification.

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Figure 1.2. Early chondrogenesis 8

Condensing

mesenchymal

cells

Cartilage anlage

Pre-chondrocytes Secreting collagens II, IX, XI

Perichondrium

Sox5, 6, 9

BMPs

SMADs

FGFs

Wnt/β-catenin signalling

TRPV4

CACNA1H

Other channelome proteins…

Developing

epiphyseal plate

Pre-chondrocyte

Prepare for

chondrocyte

proliferation

Developing anlage

Developing bone

Pre-chondrocytes at

the periphery

envelop the anlage

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1.1.3 Chondrocyte proliferation, columnar formation, and pre-hypertrophy (see Figure

1.3)

By E11.5, chondrocytes have begun to proliferate and orient into a long shaft—the diaphysis—

surrounded on either end by globular masses—the epiphyses. Diaphysis growth occurs through

the epiphyseal plate, where layers of phenotypically different chondrocytes exist as a spectrum

toward eventual long bone development. While a portion of chondrocytes remain round and

randomly distributed throughout the ECM—deemed resting chondrocytes—another population

begins to proliferate, flatten, and organize into columns towards the diaphysis (Abad et al., 2002;

Long, Schipani, Asahara, Kronenberg, & Montminy, 2001). BMP1/BMP2 receptors signal here

with SMAD1, 5, and 8 to secrete type II collagen and proceed with cyclin-dependent kinase

(Cdk) activation for cell division (Sherr & Roberts, 2004; Schmidl et al., 2006).

The matrilins, such as Matn1 and Matn3, are ECM proteins expressed at the proliferating stage

(Yang et al., 2014). Matn3 is able to bind to Bmp2, suppressing its Col10a1 activation and

delaying hypertrophy. Col10a1 encodes type X collagen, a marker of chondrocyte hypertrophy

that is suppressed at the proliferating stage. Also, FGFR3 acts as a negative regulator of

proliferation and accelerates hypertrophy through mitogen-activated protein kinase

phosphorylation of Stat1 (Murakami et al., 2004). Furthermore, the Sox genes are still required:

deletion of Sox5 and Sox6 block proliferation, and Sox9 delays hypertrophy (Smits, Dy, Mitra, &

Lefebvre, 2004; Huang, Chung, Kronenberg, & de Crombrugghe, 2001). Sox9 protein

degradation is a requisite for hypertrophy, and Runx2—a gene that will become more active in

hypertrophy—is activated during pre-hypertrophy by Atf-3 to inhibit Sox9, cyclins, and Cdks

(James, Woods, Underhill, & Beier, 2006; Yamashita et al., 2009).

However, as the columnar proliferating chondrocytes enter the pre-hypertrophic stage and

prepare themselves for hypertrophy, the Ihh/PTHrP negative feedback loop plays one of the most

critical roles (Kronenberg & Chung, 2001). As Kronenberg (2003) describes, PTHrP, the

parathyroid hormone-related protein, is first secreted from the perichondrium and chondrocytes

near the epiphysis. It binds to proliferating chondrocytes and helps them retain their phenotype,

promoting division and delaying hypertrophy. As these chondrocytes divide, form columns, and

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eventually distance themselves sufficiently from the top of the epiphyseal plate—in a paracrine

fashion—the level of circulating PTHrP is low enough for Ihh production. At this time, the

chondrocytes have become pre-hypertrophic and cease with proliferation. Ihh, a member of the

Hedgehog family, acts on Ihh receptors in the preceding resting and proliferating chondrocytes

and increases their division rate (Chau et al., 2011). Simultaneously, Ihh signals to the

chondrocytes near the epiphysis and stimulates PTHrP production, essentially retaining the

proliferative phenotype and preventing hypertrophy in a negative feedback fashion. This way,

the Ihh/PTHrP duo reduces possible fluctuations in hypertrophic maturation and promotes

stability. Modulation of this gene pair therefore controls the spatial boundaries that the

proliferative and hypertrophic zones can consume in the epiphyseal plate.

Similar to previous stages of endochondral ossification, the chondrocyte membrane induces

diverse channel proteins to support differentiation. Ihh is a mechanosensitive gene that promotes

the proliferative phenotype by receiving mechanical stress signals through membrane stretch-

activated channels (Nowlan, Prendergast, & Murphy, 2008; Wu, Zhang, & Chen, 2001).

Interestingly, aquaporin-5, an integral membrane protein and transporter of water, is expressed in

human proliferating chondrocytes as well as the surrounding mesenchyme (Shimasaki,

Kanazawa, Sato, Tsuchiya, & Ueda, 2018). As columnar chondrocytes exit the cell cycle, their

channelome must begin to reflect the demand for hypertrophic differentiation by expressing

membrane channel proteins that help increase intracellular volume. Here, water-selective pores

such as aquaporins place their stake.

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Figure 1.3. Chondrocyte proliferation, columnar formation, and pre-hypertrophy 11

Diaphysis EpiphysisEpiphysis

Developing epiphyseal plate

Resting

chondrocytesResting

chondrocytes

Proliferating

chondrocytesProliferating

chondrocytes

Pre-hypertrophic

chondrocytes

Eventual direction of long bone growth

Eventual direction of long bone growth

BMPs

SMADs

Cdks

Col2a1

Matns

FGFR3

Sox 5, 6, 9

Runx2

PTHrP

AQP5

Other channelome proteins . . .

Proliferating

chondrocyte

Prepare for pre-

hypertrophy

Pre-hypertrophic

chondrocyte

Ihh Prepare for

hypertrophy

Secreting collagens II, IX, XI

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1.1.4 Chondrocyte hypertrophy (see Figure 1.4)

By the time the developing embryo reaches E12.5-E13.5, the first wave of proliferating

chondrocytes leave the cell cycle and begin differentiating into hypertrophic chondrocytes. A

volume increase occurs prior to terminal differentiation. Chondrocyte volume increase

contributes to growth rate and the final long bone length primarily through accumulation of

water (Wilsman, Farnum, Leiferman, Fry, & Barreto, 1996; Buckwalter, Mower, Ungar,

Schaeffer, & Ginsberg, 1986). However, whether the expansion occurs through imbalanced fluid

uptake or through a matched growth of intracellular organelles was initially unclear. Cooper et

al. (2013) explain that murine tibial epiphyseal plate chondrocytes undergo three specific phases

of hypertrophy.

Using P5 mice, it was observed that chondrocytes first increase 3-fold from ~600 femtolitres (fl)

to 2000 fl in volume—the internal macromolecules also grow proportionately and the dry mass

density is therefore retained. In the second stage, a 4-fold increase in volume occurs from 2000 fl

to ~8000 fl—but without an increase in internal dry mass, effectively quartering the dry mass

density. In the third and final stage, the dry mass is permitted to stabilize before the chondrocyte

enlarges 2-fold to ~14000 fl. The dry mass grows proportionately with this increase at this stage

and the final density remains as approximately ¼ of the initial density. Cooper et al. (2013) show

in a linear regression that without disproportional growth, the chondrocyte volume would not

even reach 10000 fl if dry mass grew linearly. This process of hypertrophy, like endochondral

ossification as a whole, is henceforth sequential and tightly regulated by a variety of factors.

BMPs generally promote hypertrophy as explored in a variety of cell culture experiments, but

results can vary from stimulation to delay (Kobayashi, Lyons, McMahon, & Kronenberg, 2005).

For example, mice overexpressing Bmp4 have enhanced chondrocyte hypertrophy but BMP7

addition to ATDC5 cell-line chondrocytes suppresses their hypertrophy (Tsumaki et al., 2002;

Caron et al., 2013). As mentioned before, the Ihh/PTHrP duo tightly controls the rate of

hypertrophy. Transcription factor Mef2c binds and activates Col10a1 as a marker of hypertrophy

(Arnold et al., 2007). The hypoxia-inducible factors (HIFs) are heterodimers that can also bind

the Col10a1 promoter potently to transition chondrocytes into hypertrophy (Saito et al., 2010).

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Not surprisingly, the most common markers of hypertrophic chondrocytes are type X collagen as

well as Mmp13, an enzyme responsible for collagen matrix restructuring for bone formation

(Nurminskaya & Linsenmayer, 1996). Runx2 and Runx3 are both expressed during hypertrophy

as requirements for chondrocyte maturation, albeit in a redundant manner (Inada et al., 1999).

Runx2 directly binds and activates Col10a1, Mmp13, and Ihh to maintain the hypertrophic

phenotype (Zheng et al., 2003; Selvamurugan, Kwok, Alliston, Reiss, & Partridge, 2004;

Yoshida et al., 2004). Proteins important for impending bone formation and blood vessel

invasion, such as osteopontin, osteocalcin, and VEGF, are also expressed during hypertrophy

(Lian, McKee, Todd, Gerstenfeld, 1993; Horner et al., 1999). As for the Sox trio genes, they are

likely turned off by Runx2 activity through reciprocal inhibition (Cheng & Genever, 2011).

As chondrocyte hypertrophy relies on water accumulation, members of the channelome capable

of water transport likely play an important role. Passive water intake through aquaporin channels

in articular chondrocytes surrounding the epiphyses have been well documented (Liang, Feng, &

Ma, 2008; Mobasheri et al., 2004). Furthermore, Aquaporin-1 is expressed throughout rat

epiphyseal plates and promotes hypertrophy (Claramunt et al., 2017). Other aquaporin isoforms

may be present to conduct water intake but have not been largely explored in the epiphyseal

zones. Channels such as calcium ion transporters can import calcium to activate calmodulin,

RUNX2, and maintain the hypertrophic phenotype (Chen, Fu, Cong, Wu, & Pei, 2015). As well,

channels that can import reactive oxygen species (ROS) such as hydrogen peroxide (H2O2) may

generate hypoxic environments necessary to increase HIF activity and promote hypertrophy

(Lennicke, Rahn, Lichtenfels, Wessjohann, & Seliger, 2015). Members of the channelome,

cellular volume expansion, and specific gene expression work together to prepare hypertrophic

chondrocytes for terminal differentiation, ossification, and ultimately long bone growth.

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Figure 1.4. Chondrocyte hypertrophy 14

Eventual direction of long bone growth

Hypertrophic

chondrocytes

1

Phases of chondrocyte

hypertrophy

2

3

Pre-hypertrophic

chondrocyte Volume 3x, dry mass 3x

Volume x2, dry mass x2

Volume 4x

Result:

Volume ~24x

Dry mass ~6x

Dry mass density = ¼ initial densityBMPs

Mef2c

Col10a1

HIFs

Mmp13

Runx2, Runx3

Prepare for

ossification

Hypertrophic

chondrocyte

Aqp1

Calcium ion transporters

Other channelome proteins . . .

Diaphysis

Epiphysis (not fully

shown)

Epiphysis (not fully

shown)

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1.1.5 Ossification and long bone growth (see Figure 1.5)

Thus far, the entire process of endochondral ossification has been occurring in the centre of the

diaphysis; the primary centre of ossification. As Salazar, Gamer, & Rosen (2016) describe, the

centre is dominated by hypertrophic chondrocytes and chondrocytes are sequentially less

differentiated towards either of the epiphyseal ends, reflecting the spectrum of chondrocyte

phenotypes. By E14.5, hypertrophic chondrocytes in the centre core undergo apoptosis and blood

vessels invade to deliver hematopoietic stem cells (HSCs) that differentiate into osteoclasts.

Osteoclasts are cells that perform matrix resorption, whereas osteoblasts—which are required

after resorption—originate from MSCs similarly to chondrocytes and perform bone matrix

formation instead (Caetano-Lopes, Canhão, & Fonseca, 2007). The collagen matrix left behind

by the hypertrophic chondrocytes is excavated by osteoclasts and forms the bone marrow cavity.

Here, the remaining hypertrophic chondrocyte population is bisected by the vasculature and

osteoclasts, forming a longitudinal growth axis with one population of chondrocytes pointing

towards one epiphysis and the second population heading toward the other. As the populations

grow further in distance appositionally from the marrow cavity, osteoblasts arrive with the

invading blood vessels to synthesize osteoid for bone mineralization in the spaces where

hypertrophic chondrocytes have died and osteoclasts have cleared.

At postnatal days 5-7 (P5-P7), vasculature invades the globular ends of each epiphysis and

chondrocytes in their centre undergo the entire aforementioned process of differentiation towards

hypertrophy (Xing, Cheng, Wergedal, & Mohan, 2014). These secondary centres of ossification

ossify in the same manner, with the chondrocytes spreading to the ends of the bone becoming

articular cartilage, and the chondrocytes approaching either one of the primary centre

populations forming a union known as the epiphyseal plate. Eventually, ossification from either

end of the plate permeates into the chondrocyte population, causing the plate to narrow until the

diaphysis meets the epiphysis and long bone growth ceases. The primary centre of ossification

eventually becomes the bone marrow cavity, while the secondary centre of ossification is filled

with trabecular bone. Trabecular bone is a porous, spongy tissue found at the epiphyses and is

the main load-bearing bone in vertebrates (Oftadeh, Perez-Viloria, Villa-Camacho, Vaziri, &

Nazarian, 2015). The outer layer surrounding the bone is hard cortical bone, the compact tissue

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enveloping the diaphysis (Eriksen, 2010). The process of ossification therefore requires many

steps of regulation as the entire long bone structure lengthens. Here, osteoblastogenesis is critical

to promote bone growth.

Lefebvre & Bhattaram (2010) succinctly describe the roles of osteoblasts: 1) to secrete non-

mineralized osteoid for later mineralization, 2) to secrete alkaline phosphatase and provide

inorganic phosphate for mineralization, and 3) to produce osteocalcin and other bone-specific

proteins to help mineralize the osteoid matrix. Osteoblasts primarily rely on Runx2 as a master

factor to differentiate from mesenchymal stem cells (MSCs); lack of Runx2 at the ossification

stage completely ablates bone formation (Otto et al., 1997). Osx is another transcription factor

that activates several bone genes—Col1a1 for type 1 collagen, Bgp for osteocalcin, and Bsp for

bone sialoprotein—in MSCs and transforms them into functional osteoblasts (Nakashima et al.,

2002; Sinha, Yasuda, Coombes, Dent, & de Crombrugghe, 2010). However, osteoblasts are not

only derived from MSCs. Hypertrophic chondrocytes in the epiphyseal plate are also able to

transdifferentiate into osteoblasts as an alternative to the apoptotic fate (Tsang, Chan, & Cheah,

2015). Here, Runx2 and Osx can stimulate them to re-enter the cell cycle, secreting Col1a1 and

osteocalcin as newly differentiated osteoblasts. This optional ‘chondro-osteoblastic’ lineage

highlights that osteogenic differentiation of hypertrophic chondrocytes is yet another point of

control in ossification.

In the case of rare metaphyseal chondrodysplasias—diseases that affect skeletal stature—such as

MCDS, a failure of chondro-osteoblastic differentiation is responsible for delayed ossification,

shorter long bones, and bowed legs (Ho et al., 2007). Nevertheless, general osteoblastogenesis

control still relies on many key factors from previous steps of endochondral ossification. Wnt/β-

catenin signalling is required in osteoblasts after Osx expression for osteoblasts to mature and

produce osteocalcin (Day & Yang, 2008). FGFR3 is a promoter of MSC-osteoblast

differentiation, but inhibitor of mature osteoblast mineralization (Su, Jin, & Chen, 2014). BMP2

also upregulates Runx2 and Osx expression during osteoblastogenesis (Matsubara et al., 2008).

During ossification, gene dysregulation can lead to abnormal length in specific bones (Panda,

Gamanagatti, Jana, & Gupta, 2014). Unnatural shortening of the major long bones can be

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rhizomelic—affecting the proximal limbs; the humerus and femur—or mesomelic—affecting the

distal limbs; the radius, ulna, tibia, and fibula. Aside from mutations in the main players of

endochondral ossification, genes located on the sex chromosomes can also cause dysplasias.

Mutation of SHOX, the Short Stature Homeobox-containing gene, can cause idiopathic short

stature (Marchini, Rappold, & Schneider, 2007). Interestingly, the malformation of singular or

multiple individual bones can also occur; however, these are classified as dysostoses instead of

dysplasias (Offiah & Hall, 2003). Overall, ossification may not necessarily proceed at the same

rate in chiral limbs. Furthermore, irregular ossification and abnormal skeletal stature may arise

from mutations not necessarily related to the major genes in the epiphyseal plate.

In the channelome, aquaporin-5 enhances MSC apoptosis in the bone marrow through high water

permeability and decelerates femoral bone healing, where osteoblasts play a critical role (Yi et

al., 2012). In the osteoblast nuclear membrane, vitamin D receptors receive the 1,25D hormone

to stimulate bone-specific protein production and matrix secretion through chloride and calcium

channel activation (Wang, Zhu, & DeLuca, 2014; Zanello & Norman, 2004). Overall, a myriad

of genes, transcription factors, and protein channels dictate the cellular profile and ossification

status of the growing long bone. To further examine their specific contributions, the generation

of mutant mouse models is paramount to understanding effectors of bone elongation. The

deletion or overexpression of important aforementioned genes—such as Sox9 or Ihh—has helped

provide insight into the known and unknown processes affecting endochondral ossification.

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Figure 1.5. Ossification and long bone growth 18

Developing

articular

cartilage

Developing

articular

cartilage

Secondary centre

of ossification

(developing

trabecular bone)

Secondary centre

of ossification

(developing

trabecular bone)

Epiphyseal plate Epiphyseal plate

Bone

marrow

cavity

Growing bone

tissue

(osteoblasts,

osteoclasts,

trabecular bone)

Growing bone

tissue

(osteoblasts,

osteoclasts,

trabecular bone)

Cortical bone

Direction of long bone growth

Primary centre of

ossification

Narrowing

epiphyseal

plate

Narrowing

epiphyseal

plate

Growing

secondary

centre

Growing

secondary

centre

Diaphysis

Epiphysis Epiphysis

Osx

Col1a1

Bgp

Bsp

Runx2

FGFR3

BMP2

Prepare for

apoptosis or

transdifferentiation

Terminal hypertrophic

chondrocyte

Aqp5

Vitamin D receptors &

chloride/calcium channels

Other channelome proteins . . .

Osteoblast (forms bone matrix) Osteoclast (resorbs bone matrix)

MSCsHSCs

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1.2 Models of differential long bone growth

The house mouse, Mus musculus, is an invaluable model organism to understanding human

biology due to strikingly similar genomes and physiology (Perlman, 2016). Using homologous

recombination or Cre-Lox recombination, genes implicated in development and disease can be

knocked out globally or in specified sites throughout the mutant. However, both knockout and

overexpression models are useful in determining the effect of a gene in absence or abundance.

Here, murine mutants of the most critical transcription factors in endochondral ossification and

their skeletal phenotypes are described in detail. Their human mutation counterparts, if known,

are also described (see Table 1.1).

1.2.1 Sox mutants

As previously mentioned, the Sox protein trio is important towards chondrogenesis and early

differentiation, but delay hypertrophy. Sox9flox/flox; Prx1-Cre embryos, which have targeted limb

bud deletion of Sox9 prior to mesenchymal condensation, are unable to form either cartilage or

bone (Akiyama et al., 2002). In the same study, Sox9flox/flox; Col2a1-Cre embryos, which have

Sox9 deletion after condensation, present with severe chondrodysplasia. Akiyama et al. (2004)

also examined Sox9 overexpression with Col2a1/Sox9 knock-in embryos, observing decreased

chondrocyte proliferation, delayed hypertrophy, and diminished long bone formation.

Interestingly, Smits et al. (2001) found that Sox5 and Sox6 single-null mice presented with mild

skeletal abnormalities. However, Sox5; Sox6 double-null fetuses present with severe

chondrodysplasia, suggesting that Sox5 and Sox6 are redundant but essential together for bone

growth. Sox5 and Sox6 help secure Sox9 to the Col2a1 enhancer for type II collagen production

(Han & Lefebvre, 2008).

Overall, the Sox trio carefully regulates endochondral ossification and fluctuations in

expression—up or down—can severely dysregulate the final skeletal structure. In humans, any

mutations in the SOX9 coding region can lead to campomelic dysplasia: a typically lethal

disorder resulting in long bone bowing and other skeletal defects (Mansour et al., 2002).

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1.2.2 Bmp mutants

Bmp signalling is present in all stages of endochondral ossification and primarily functions

through Smad pathways (Retting, Song, Yoon, & Lyons, 2009). Limb bud deletion of Bmp2 and

Bmp4 from MSCs severely impairs osteogenesis (Bandyopadhyay et al., 2006). However,

Bmp4flox/flox; Col2a1-Cre embryos alone do not display a striking cartilage phenotype—only

when Bmp2 is deleted alongside do severe chondrodysplasias occur (Shu et al., 2011). In the

study, it was concluded that Bmp4 alone is insufficient to affect chondrocyte differentiation but

Bmp2 alone is. Also, Bmp6 -/- mice at 10 weeks of age have smaller long bones and reduced

longitudinal growth rate following estrogen treatment (Perry, McDougall, Hou, & Tobias, 2008).

The BMP6 promoter is transcriptionally regulated by estrogen receptor α, suggesting that Bmp6

may be hormonally stimulated (Ong, Colley, Norman, Kitazawa, & Tobias, 2004). Yet, not all

Bmp mutants with bone phenotypes have diminished growth. GDF-7 is the murine homologue of

human BMP12 and GDF-7 -/- mice have accelerated endochondral bone growth, due to a shorter

hypertrophic phase duration (Mikic, Ferreira, Battaglia, & Hunziker, 2008). Mutations in specific

Bmp isoforms do not all result in long bone defects, but many known isoforms are important in

embryogenesis. In humans, dysregulation of BMP signalling can lead to osteogenesis

imperfecta—through BMP1—and osteoarthritis—through BMP5 and BMP14 (Wang et al.,

2014).

1.2.3 Fgfr mutants

The Fgfs mediate many endochondral cellular responses by binding to the four unique Fgfrs (Su,

Jin, & Chen, 2014. Since activated Fgfrs then phosphorylate and activate pathways downstream,

modulating Fgfr expression greatly influences the efficacy of Fgf signalling (Ornitz, 2005).

Fgfr1flox/flox; Col2-Cre embryos have osteo-chondroprogenitor cells with delayed osteoblast

differentiation, but show increased bone mass by adulthood (Jacob, Smith, Partenen, & Ornitz,

2006). In humans, activating mutations of FGFR1 leads to osteoglophonic dysplasia and

rhizomelic dwarfism, where proximal limbs are shortened (White et al., 2005). Fgfr2 mutants

have bone defects which are mainly cranial rather than endochondral. However, deletion of the

3c alternative of Fgfr2 results in premature loss of growth and diminished long bones

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(Eswarakumar et al., 2002). Human gain-of-function mutations of FGFR2 cause a variety of

craniosynostes, which are premature fusions of skull sutures (Wilkie, 2005). In Fgfr3 mutants,

activating mutations result in shortened long bones, disorganized proliferating zone columns, and

smaller body size overall (Ornitz & Marie, 2002). Deletion of the 3c isoform of Fgfr3 results in

overstimulation of the proliferating zone and dramatic skeletal overgrowth with reduced bone

mineral density (Eswarakumar & Schlessinger, 2007). In humans, Ornitz & Marie (2002) also

review that a variety of different FGFR3 point mutations result in many dysplasias, such as

achondroplasia and hypochondroplasia. On the contrary, Fgfr4 -/- mutants are conversely normal

in development—but when deleted alongside Fgfr3 in a double knockout, they are dwarfed in

overall size (Weinstein, Xu, Ohyama, & Deng, 1998). Overall, Fgfrs control balance among the

cellular players of skeletal growth.

1.2.4 Ihh & PTHrP mutants

Indian hedgehog and PTHrP are responsible for controlling the rate at which chondrocytes

undergo hypertrophy, meaning that their modulations should critically alter the long bone

phenotype in mutants. Indeed, Ihh -/- mutants show severe shortening of limbs at all

endochondral ossification embryonic timepoints with almost completely reduced appendicular

bones by the newborn stage (St-Jacques, Hammerschmidt, & McMahon, 1999). These mutants

have drastically reduced chondrocyte proliferation, as well as delayed chondrocyte maturation

into hypertrophy. In humans, homozygous mutations of IHH result in acrocapitofemoral

dysplasia: a rare autosomal recessive disorder featuring short limbs and irregular-shaped hands

and hips (Hellemans et al., 2003). As the partner of Ihh, PTHrP mutations display similar

phenotypes. The epiphyseal plates of PTHrP -/- mutants have markedly shorter proliferating

zones as well as advanced hypertrophy, apoptosis, and terminal mineralization (Lee et al., 1996).

Without surprise, human mutations of PTHrP result in chondrodysplasia (Nissenson, 1998).

1.2.5 Runx2 mutants

Runx2 plays a pivotal role in the hypertrophic and mineralization stages of endochondral

ossification. Runx2 -/- mutants die shortly after birth due to a complete lack of ossification

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(Komori et al., 1997). Takarada et al. (2013) show that even Runx2flox/flox; Col2-Cre mutants are

unable to prevent this perinatal lethality, suggesting that Runx2 is a requirement for proper

endochondral ossification in both embryonic and postnatal stages. However, they also show that

Runx2flox/flox; Col1-Cre present with no observable skeletal abnormalities. Runx2 may therefore

be important but redundant by the time committed osteoblasts arrive to build bone, where Col1a1

is expressed. Using the same type 1 collagen promoter, Runx2 was overexpressed in osteoblasts

(Liu et al., 2001). Surprisingly, these transgenic mutants are stunted in growth, prone to

fractures, and have diminished osteoblast mineralization capacities. Runx2 is likely a negative

regulator of bone growth in late osteoblast development to control bone mass, but normally

promotes mineralization at physiological levels of expression. In humans, the importance of

RUNX2 is also evident. RUNX2 haploinsufficiency causes cleidocranial dysplasia, where the

clavicles, teeth, and overall stature are underdeveloped (Xu et al., 2017).

1.2.6 Mutant models with membrane protein and channelome modulation

Of the aforementioned critical players of endochondral ossification, proteins such as Fgf, Bmp,

and Ihh bind their receptors on the plasm membrane for downstream signalling. However, the

chondrocyte membrane is not static; its protein expression must change to reflect every stage of

its transformation during the long bone growth process. The channelome is home to a variety of

membrane proteins that are gaining explorative value as more mutant mice are generated to

investigate their skeletal outcomes.

Pannexin-3, or Panx3, is one such transmembrane gap junction channel with robust expression in

skin and cartilage (Penuela et al., 2007). As Panx3 is also expressed in pre-hypertrophic

chondrocytes, hypertrophic chondrocytes, and osteoblasts, Oh et al. (2015) generated Panx3 -/-

mice to observe their skeletal phenotypes. Panx3 -/- embryo epiphyseal plates showed delayed

hypertrophy, delayed osteoblast differentiation, delayed mineralization, and ultimately shortened

long bones that persisted till adulthood. Indeed, the Panx3 promoter region contains binding sites

where Runx2 may act and promote bone growth (Bond et al., 2011). Adam17 is a membrane

protein that functions as a metalloproteinase, releasing factors critical to hypertrophy such as

tumor necrosis factor alpha (Hall & Blobel, 2012). Hall & Blobel (2012) generated

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Adam17flox/flox; Col2a1-Cre mutants and showed that newborn mice have expanded hypertrophic

zones with retarded long bone growth. Concerning hypertrophy, it should be reiterated that fluid

uptake—primarily water—is the root mechanism for chondrocyte enlargement. Investigating the

channelome members that transport water, the aquaporins, may be valuable to deciphering how

ubiquitous membrane proteins contribute to bone growth. However, mutant mice with modulated

aquaporin isoform genes are not well explored, and neither are the examination of their chondro-

osseous physiologies. Previously, Wu et al. (2007) ventured to measure the femoral bone density

of aquaporin-1-null mice and found that 2-month old mutants had reduced density, calcium, and

phosphorous in the bones. A focus on the precursors to ossification—the different chondrocyte

phenotypes—will characterize how these bone irregularities might arise. Specifically, the

aquaporins show promise as effectors of chondrocyte gene expression, differentiation, and

potentially long bone growth.

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Table 1.1. Models of differential bone growth

Mutation / Affected gene(s) Hallmarks Disorder (if described)

BMP1 Fragile bones Osteogenesis imperfecta

BMP14 Articular cartilage damage Osteoarthritis

Bmp2C/C ; Bmp4C/C Severe chondrodysplasia -

Bmp4flox/flox; Col2a1-Cre Mild cartilage abnormalities -

BMP5 Articular cartilage damage Osteoarthritis

Bmp6 -/- (w/ estrogen) Smaller long bones, reduced growth rate -

Col2a1/Sox9 knock-in Decreased chondrocyte proliferation, delayed

hypertrophy, decreased long bone formation -

FGFR1 (activating) Craniofacial abnormalities, dwarfism; proximal

limb shortening

Osteoglophonic dysplasia;

rhizomelic dwarfism

Fgfr1flox/flox; Col2-Cre Delayed osteoblast differentiation, increased

adult bone mass -

FGFR2 Premature fusions of skull sutures Craniosynostis

Fgfr2 (3c) Chondrodysplasia -

Fgfr3 (3c) -/- Skeletal overgrowth, reduced bone mineral

density -

Fgfr3 (activating) Dwarfism, disorganized epiphyseal plate

proliferating zone columns -

GDF-7 -/- (murine homologue

of BMP12) Accelerated endochondral bone growth -

IHH Shortened long bones, irregular hands and hips Acrocapitofemoral dysplasia

Ihh -/- Severe chondrodysplasia -

PTHrP Chondrodysplasia -

PTHrP -/- Shorter epiphyseal plate proliferating zones,

advanced hypertrophy and mineralization

RUNX2 (haploinsufficiency) Short stature, underdeveloped clavicles and

teeth Cleidocranial dysplasia

Runx2 (transgenic) Fragile bones, diminished mineralization,

stunted growth -

Runx2 -/- Absence of ossification, perinatal lethality -

Runx2flox/flox; Col2-Cre Perinatal lethality -

Sox5 -/- Mild skeletal abnormalities -

Sox5; Sox6 -/- Severe chondrodysplasia -

Sox6 -/- Mild skeletal abnormalities -

SOX9 Lethality, long bone bowing, generalized

skeletal defects Campomelic dysplasia

Sox9flox/flox; Col2a1-Cre Severe chondrodysplasia -

Sox9flox/flox; Prx1-Cre Absence of cartilage and bone -

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1.3 Aquaporins and chondrocytes: expression, function, and regulation

Aquaporins (AQPs) are a subfamily of integral membrane proteins that facilitate water and

solute conductance in a wide variety of physiological structures (Agre, 2006). AQPs are

distinguished from other integral transporters by a series of conserved hydrophobic residues and

a signature ‘NPA’ motif (Kruse, Uehlein, & Kaldenhoff, 2006). Functionally, AQPs are defined

as the isoforms that display selectivity in water and small solute transport across a membrane

(Takata, Matsuzaki, & Tajika, 2004). Thirteen mammalian isoforms (AQP0—AQP12) exist

throughout the human body with tissue-specific patterns and a higher concentration in organs

that constantly process water, such as the kidneys. However, homeostatic fluid transport is an

integral function to all healthy cells in maintaining basic tissue upkeep and controlled growth. In

particular, chondrocytes undergo notable water transport during a) volume changes in resting and

loaded cartilage tissue at the articular region, and b) phased volume changes for hypertrophy in

the epiphyseal plate that underlie skeletal growth (Oswald, Chao, Bulinkski, Ateshian, & Hung,

2008; Cooper et al., 2013). The chondrocyte-aquaporin relationship has been explored among a

variety of isoforms and substantiates the importance of the channelome in chondrocyte

proliferation, growth, and apoptosis.

1.3.1 AQP1

Aquaporin-1 (AQP1) was initially discovered as a tetrameric 28-kDa integral membrane protein

in human red blood cells when co-purified with the 32-kDa subunit of the Rh polypeptides

(Agre, Saboori, Asimos, & Smith, 1987). Originally named CHIP28 (channel-forming integral

protein of 28 kDa), expression of the gene in the X. laevis oocyte expression system exhibited

swollen oocytes with higher osmotic water permeability coefficients than their control

counterparts when placed in osmolarity-tempered solution (Agre et al., 1993). This demonstrated

that an abundant, archetypal membrane channel was capable of specific water transport and

confirmed its existence in a variety of mammalian organs as the newly termed ‘aquaporin’. The

wide distribution of AQP1 in ordinary human tissue was first illustrated using tissue microarray

analysis and visualized with immunohistochemistry, where the protein was found to be strongly

localized in chondrocytes within the deep zone of articular cartilage (Mobasheri & Marples,

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2004). This presence supported a role of AQP1-mediated water transport across the chondrocyte

membrane, suggesting that compressive and osmotic forces finely balanced by the protein

channel may be necessary in the maintenance of healthy cartilage. Water content and type II

collagen collectively contribute to articular cartilage load bearing, where the loss of either

component can strain the other with a greater weight burden (Mow, Kuei, Lai, & Armstrong,

1980; Fox, Bedi, & Rodeo, 2009). As dysregulated water content in articular chondrocytes may

promote pathophysiological degradation of cartilage collagen fibers, these findings were

extrapolated to investigations in the possible contribution of AQP1 to osteoarthritis—a

degenerative disease featuring breakdown of cartilage in articular regions.

Meng, Ma, Li, & Wu (2007) simultaneously measured Aqp1 and Aqp3 mRNA expression in

adult rats after inducing osteoarthritis in their temporomandibular joints, observing that Aqp3—

but not Aqp1—mRNA was highly upregulated in the dissected cartilage groups. Gao et al.

(2011) then focused on determining a relationship between Aqp1 expression and osteoarthritis,

albeit in the long bone joints. After amputation of knee ligaments and partial damage to the

medial menisci in different test groups, aged Sprague-Dawley rats presented with significantly

elevated Aqp1 mRNA, Caspase-3 mRNA, and Caspase-3 protease activity several weeks post-

operation. As caspases execute cell apoptosis, the concomitant rise of Aqp1 expression suggested

a positive co-regulatory relationship between the two genes in chondrocyte death and henceforth

the onset of osteoarthritis.

Musumeci et al. (2013) further clarified the relationship between Aqp1 and osteoarthritis by

performing medial and lateral meniscectomies on thirty-six rats, observing that Aqp1 expression

was increased in the test groups via immunochemistry and Western blot analysis. In human

chondrocytes, AQP1 mRNA is also significantly higher in osteoarthritic cartilage and is further

elevated through IL-1B treatment, hinting at an inflammation-controlled regulation of AQP1 in

osteoarthritis progression (Haneda et al., 2018). Thus, the breadth of AQP1-osteoarthritis

investigations suggests that the aquaporin may exacerbate osteoarthritic swelling in the articular

regions and compromise the cellular morphology and metabolism of chondrocytes—although a

purported mechanism has not been elucidated thus far. Overall, AQP1 plays a functional role in

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chondrocyte water uptake and its expression is implicated as a contributor to the onset of

osteoarthritis.

1.3.2 AQP2

The concrete ability of aquaporins to perform bidirectional transport of water in cartilage further

led to investigations of their presence in chondrocyte-like cells. Aquaporin-2 (AQP2) expression

was initially measured in the nucleus pulposus and annulus fibrosus of human intervertebral

discs, both consisting of hyperosmotic fibrocartilage responsible for absorbing daily compressive

loads in bodily movement (Richardson, Knowles, Marples, Hoyland, & Mobasheri, 2008). The

study sought to discover if AQP1, AQP2, and AQP3 were localized in discs and controlled cell

volume and extracellular matrix metabolism. While their immunohistochemistry was negative

for AQP2 protein in all fibrocartilage region cells, Gajghate et al. (2009) found AQP2 protein

expression in vivo in both rat and humans nucleus pulposus tissue, regulated by the tonicity-

enhancer binding protein TonEBP. Using mouse embryonic fibroblasts—a precursor of the

murine chondrocytic lineage—they demonstrated that TonEBP/NFAT5-null mutants experience

~50% decreases in Aqp2 promoter activity. AQP2 is largely unexplored in chondroskeletal

studies; yet its capacity to control water balance in chondrocyte-like resident cells by the

osmosensitive transcription factor TonEBP suggests that other aquaporin isoforms are also

transcriptionally regulated for cellular volume control. In chondrocytes, the diverse membrane

channels and porins rely on these signalling molecules to control not only disease—such as

osteoarthritis in the articular region—but also their natural differentiation in strictly-regulated

processes such as endochondral ossification. In chondrocyte hypertrophy, water accumulation is

a defining characteristic (Buckwalter et al., 1986). Therefore, aquaporins—the only known

membrane proteins that directly transport water—likely contribute to hypertrophy during

endochondral ossification (Kozono, Yasui, King, & Agre, 2002).

1.3.3 AQP3

Several aquaporin family members—deemed ‘aquaglyceroporins’—are also capable of glycerol

and uncharged solute transport in addition to water. Aquaporin-3 (AQP3) was the first

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mammalian aquaglyceroporin to be cloned and was explored in chondrocytes to determine if

equine articular cartilage expressed aquaporins as a means of volume regulatory behavior

(Mobasheri & Marples, 2004). AQP3 and AQP1 were two isoforms expressed in the articular

region, suggesting their roles in the transport of metabolites and water respectively across the

chondrocyte membrane. Indeed, AQP3 was later found to be expressed in human articular

chondrocytes through human tissue microarrays (Mobasheri et al., 2005). Due to the presence of

both AQP3 and AQP1 in the articular region, both members were investigated during the

chondrogenic differentiation of human mesenchymal stem cells derived from adipose tissue

(Graziano et al., 2018). Chondrogenic markers including SOX9, aggrecan, and type II collagen

were measured during a four-week period alongside AQP3 and AQP1. Graziano, Avola,

Pannuzzo, & Cardile (2018) discovered that while AQP1 protein levels decreased after 21 days,

AQP3 protein persisted at high levels by 28 days. This suggests that while AQP1 may play

important roles at the earlier stages of differentiation, AQP3 is necessary throughout the process

and its alteration may lead to chondrogenic death and cartilage damage. As AQP3 is also

expressed in other immature cell types such as murine bone-marrow derived dendritic cells and

bovine blastomeres, aquaporins may be responsible for important developmental aspects in the

embryonic stages in addition to postnatal conditions such as osteoarthritis (Song et al., 2011;

Zhao et al., 2015). In particular, the importance of AQP3 expression during chondrogenesis

highlights a critical role of aquaglyceroporins in chondrocyte generation. Other members of the

aquaglyceroporin family—AQP7, AQP9, and AQP10—may play special functional roles during

prenatal processes, although their chondrogenic significance has yet to be delineated.

1.3.4 AQP4

Aquaporin-4 (AQP4) is largely explored in brain disorders, with a particular focus on its

involvement in astrocyte activity and the central nervous system (Verkman, Smith, Phuan,

Tradtrantip, & Anderson, 2017). However, Aqp4 is expressed in rat articular chondrocytes and

its siRNA inhibition during IL-1B-induced apoptosis reduces chondrogenic death by reducing

p38 MAPK activity (Cai et al., 2017). Similar to the AQP1 findings of Haneda et al. (2018),

Aqp4 likely contributes to chondrocyte apoptosis in joint diseases such as osteoarthritis and

rheumatoid arthritis. The presence of all aquaporins isoforms in varying tissues has not yet been

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clearly characterized, and Aqp4 appears to have therapeutic value as a knockdown target in

organs aside from the brain. Due to the ubiquitous nature of aquaporins in a wide range of

mammalian cells, even uninvestigated isoforms may emerge as promising candidates as meta-

analyses continue revealing relationships between the channelome and diseases. The rising

recognition of aquaglyceroporins in metabolic syndrome and obesity-related pathologies

substantiates this phenomenon (da Silva, Rodrigues, Rebelo, Miranda, & Soveral, 2018).

1.3.5 Other aquaporins in chondrocyte activity

The remaining mammalian aquaporin isoforms in relation to chondrocytes have been largely

uninvestigated. Aquaporin-0 (AQP0) expression has been discovered in osteoarthritic articular

cartilage, but is mostly explored in its essential homeostatic role in the lens of the eye (Haneda et

al., 2018; Schey, Petrova, Gletten, & Donaldson, 2017). Aquaporin-5 (AQP5) is regulated by

BMP6—an inducer of cartilage and bone growth—in the salivary gland of Sjögren's syndrome-

like mice, yet its relationship to chondrocyte function is tangential (Lai et al., 2016). Aquaporin-

6 (AQP6) is expressed in Meckel’s cartilage in human orofacial tissues, but there are no studies

in its function in articular and epiphyseal plate chondrocytes (Wang et al., 2003). Aquaporin-7

(AQP7) is expressed in adipose tissue, and its deficiency results in increased glycerol kinase

activity, triglyceride accumulation, and ultimately obesity and a Type-2 diabetic phenotype (Iena

& Lebeck, 2018). Interestingly, these phenotypes are reminiscent of metabolic syndrome

symptoms, which include inflammation and osteoarthritis. Beyond cartilage damage from

obesity-added compressive forces, hyperglycemia from insulin resistance triggers production of

mitochondrial reactive oxygen species, inflammatory mediators, and metalloproteinases in

chondrocytes (Courties, Sellam, & Berenbaum, 2017). It is possible that Aqp7-null mice

chondrocytes are abnormally prone to degradation in the articular region and hypertrophy in the

epiphyseal plate due to these factors, although a definitive study has not been made.

The other aquaporin isoforms (8, 10, 11, and 12), aside from Aquaporin-9 (AQP9), have not

been explored in fields related to cartilage, bone, or pathologies that influence cartilage or bone

development. AQP11 and 12 are ‘super-aquaporins’ that are more recent discoveries and have

been briefly explored in major murine organs without attention to chondrocytes or skeletal

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phenotypes (Ishibashi, Tanaka, & Morishita, 2014). As a whole, the majority of aquaporin

investigations focus on isoforms in physiological structures that unambiguously require water

transport due to the nature of their functions. The chondrocyte-aquaporin relationship is

delineated in several isoforms, but characterization of previously unexplored aquaporins in

chondrocytes will highlight the importance of the channelome in both the articular and

epiphyseal zones. In particular, AQP9 is a strong candidate for investigation in chondrocyte

function due to its indiscriminate conductance nature and supporting literature for its relationship

with hypertrophy-inducing mediators. It has previously been explored in bone, osteoclasts, and

synoviocytes. A definitive study of AQP9 in chondrocytes may unveil an aquaporin isoform with

the capacity to control chondrocyte proliferation, hypertrophy, death, and even biogenesis.

1.4 Characterization of AQP9 and its novel role in chondrocyte and

bone activity

AQP9 was initially discovered in a systematic gene analysis of human adipocytes which revealed

a unique sequence encoding for a 342-amino-acid membrane protein (Kuriyama et al., 1997).

This channel was named ‘Aquaporin-9’ and was tested via expression in X. laevis oocytes,

demonstrating a potent 7-fold increase in water permeability and the ability to conduct glycerol.

Over a decade of literature has revealed its capacity to facilitate transport of urea, purines,

pyrimidines, arsenic, hydrogen peroxide, and a variety of other small uncharged solutes (Viadiu,

Gonen, & Walz, 2007; Liu et al., 2002; Watanabe, Moniaga, Nielsen, & Hara-Chikuma, 2016).

The indiscriminate substrate specificity of AQP9 makes it unique among other aquaporin

isoforms, where it may conduct a wider range of solutes that regulate cellular metabolism. Given

that endochondral ossification relies on harmony between transcription factors, gene expression,

and channelome activity, the liberal solute conductance of AQP9 shows promise as an important

aquaporin in chondrocytes as they differentiate and extend bone length.

1.4.1 General aquaporin protein structure

All aquaporin isoforms are tetramers and emit a positive electrostatic field that prohibits cations

from passing through (Rothert, Rönfeldt, & Beitz, 2017). Each monomer forms an independent

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pore, and all aquaporins share a common intramembranous protein fold comprised of two amino

acid tandem repeats in opposing directions. These repeats largely define aquaporin function and

ultimately the identity of solutes that chondrocytes may receive during regulated processes, such

as differentiation in the epiphyseal plate. In the first repeat, 3 helices aptly named ‘helices 1-3’

are present alongside a reentrant loop named ‘B’. Yan & Luo (2010) characterized that reentrant

loops are important structural motifs in alpha-helical transmembrane proteins that penetrate

halfway into the membrane and then return to their side of origin. These loops feature low

hydrophobicity and may serve to limit the amount of water permeated through aquaporins, as

more hydrophilic residues in the inner pore constriction can attract water molecules to the

channel walls and raise the energy cost of passage (Murata et al., 2000). In the second repeat, 3

more helices named ‘helices 4-6’ are present alongside a reentrant loop named ‘E’. Loops B and

E form the short pore-lining alpha-helices HB and HE respectively, which contain important

residues located midway into the channel. These loops also contain the hallmark motifs of

aquaporins, the Asn-Pro-Ala (NPA) motifs. These two motifs are co-localized and attract passing

water molecules to the same side, where the helices HB and HE are nestled midway into the

membrane. Murata et al. (2000) discovered that as water molecules pass through the pore in

single-file due to efficient hydrogen-bond arrangement, Asn residues 76 and 192 from HB and

HE respectively will use their amido groups to force every incoming water molecule to switch

their hydrogen-bonding partners to themselves instead. Having abandoned the hydrogen bonds

formed with the molecule ahead and the molecule above, the targeted water molecule hydrogen-

bonds to the Asn residues and is contorted perpendicularly to the direction of water flow. With

the target’s hydrogen atoms facing 90° from the single-file water chain, the efficient stream is

broken. However, Murata et al. (2000) further explained that the pore walls feature exclusively

hydrophobic residues at the Asn constriction site, promoting exit and total permeation of water

molecules through the channel with an ultimately low energy barrier. For cations such as protons

that rely on a stable ‘proton wire’ built on the hydrogen bonds of the single-file water chain, the

chain breakage prohibits them from passage through the channel (Pomès & Roux, 1996). The

relatively tight intramembranous constrictions and wider membranous openings of aquaporins

creates a high dielectric barrier to the majority of ions. Hence, neutral solutes are favored for

passage among all aquaporin isoforms.

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1.4.2 AQP9 protein structure (see Figure 1.6)

Despite their shared structural features and resulting permeation capacities, AQP9 is

distinguished by having the widest range of substrate specificity among the aquaporins. Viadiu et

al. (2007) created an AQP9 projection map by reconstituting glycosylated rat AQP9 into two-

dimensional crystals with aid from magnesium and calcium ions. The crystals were then

embedded in glucose, frozen, and processed at 7 angstrom resolution to view the protein

structure. Interestingly, the projected AQP9 tetramer resembled the E. coli-derived glycerol

facilitator protein GlpF with greater fidelity than pure water-specific aquaporins, such as AQP0

and AQP1. AQP9 and GlpF monomer projections presented with a more square-shaped

phenotype than those of AQP0, which are more wedge-shaped in characteristic. Furthermore,

GlpF boasts a round pore diameter of 7 angstroms while AQP9 has a more oval-shaped pore of

approximately 7x12 angstroms in dimension. Viadiu et al. (2007) identified a region of lower

electron density existing in both GlpF and AQP9 specifically, which may explain their capacities

to conduct larger solutes. AQP9 not only boasts a larger pore area, but also has ‘tripathic pores’

where each channel has a hydrophobic corner, a hydrogen-bond donor corner, and a hydrogen-

bond acceptor corner (Stroud et al., 2003). These designated areas allow for substrates to be

oriented by region, increasing their likelihood of reaching an optimal spatial configuration and

passage. Viadiu et al. (2007) analyzed this characteristic and identified seven amino acid

residues conserved among all AQP9 homologues, but different from other aquaporins and GlpF.

These residues are Phe 64, Gly 81, Met 91, Val 176, Phe 180, Leu 209 and Cys 213. As most of

these substitutions occur at the hydrophobic corner near the entrance of the pore, the residues

themselves may be responsible for the lower density and easier substrate access. Overall, AQP9

is an isoform that features larger pores, a lower density barrier, and unique residues compared to

other aquaporin members. Describing substances that the channel conducts will provide insight

into AQP9 function in chondrocyte differentiation and long bone growth.

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Figure 1.6. AQP9 protein structure

Conducts:

Water

Urea

Purines

Pyrimidines

Arsenic

Hydrogen peroxide

Glycerol

Lactate

Selenite

Pore size

(~7Å x 12Å)

Projection map of AQP9 tetramer

Aqp9

monomer

12Å

Tripathic pore

components and

unique residues

33

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1.4.3 AQP9 protein function (see Figure 1.6. cont.)

The elucidated pore size and residue composition of AQP9 grants the ability to transport both

orthodox and unorthodox molecules. In the chondrocyte channelome, many membrane proteins

are multifunctional and can be ion channels, receptors, and signalling elements all in one

(Mobasheri et al., 2018). The diversity of substrates that a channel can tolerate may parallel the

amount of control it has over highly regulated and sequential processes, such as endochondral

ossification. Aside from water, AQP9 is permeable to glycerol, urea and smaller molecules

including purines and pyrimidines (Tsukaguchi, Weremowicz, Morton, & Hediger, 1999).

Lactate is also transported by AQP9 (Badaut & Regli, 2004). Chondrocytes rely heavily on

glycolysis in culture and glycerol may be imported by AQP9 as gluconeogenic fuel (Jackson,

Huang, & Gu, 2012). Conversely, lactate is a by-product of glycolysis and is produced heavily

during chondrocyte growth (Hossain, Bergstrom, & Chen, 2015). AQP9 may be important in

exporting excess lactate to maintain physiological pH and cell growth rate. As a neutral solute

conductor, AQP9 is also permeable to arsenic and even selenite (Liu et al., 2002; Geng et al.,

2017). Interestingly, arsenic contributes to telomere attrition and apoptosis by creating ROS,

which is an inducer of chondrocyte hypertrophy (Liu, Trimarchi, Navarro, Blasco, & Keefe,

2003; Morita et al., 2007). It is sensible to question if AQP9 in the chondrocyte channelome may

be an important modulator of chondrocyte differentiation under arsenic exposure. Interestingly,

arsenic exposure has been shown to decrease hypertrophic zone height in rats during

endochondral ossification (Aybar Odstrcil, Carino, Ricci, & Mandalunis, 2010).

In relation to ROS transport, one of the most striking permeants of AQP9 is H2O2 (Watanabe et

al., 2016). It was previously discussed that the HIF family of transcription factors induce

hypertrophic differentiation in the epiphyseal plate under hypoxic conditions. As H2O2

accumulates in eukaryotes in response to hypoxia, AQP9 H2O2 transport may therefore be critical

toward differentiation as well (Vergara, Parada, Rubio, & Pérez, 2012). Overall, AQP9 channels

conduct a broad spectrum of substrates—some of which have clear connections to chondrocyte

growth and possibly ossification. Their distribution and transcriptional control should be further

described to support a role in chondrocyte activity.

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Figure 1.6. cont. 35

AQP9 monomer side view

MembraneHE

HB

Hallmark

NPA

motif

Other helices (H1-H6)

Residues

unique to

AQP9

Gly

81

Met

91

Val

176

Phe

180

Leu

209

Cys

213

Asn

Pro

Ala

Hydrophobic

corner

Phe

64

H-bond

corner

H-bond

corner

Selective

passage

through

interaction

with residues

WaterUrea

Purines

Pyrimidines

Arsenic

Hydrogen peroxide

Glycerol

Lactate

Selenite

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1.4.4 Expression and regulation of AQP9 (see Figure 1.7)

Aqp9 protein is expressed in a variety of tissues, such as rat Leydig cell membranes, spleens,

brains, and murine spinal cords (Nicchia, Frigeri, Nico, Ribatti, & Svelto, 2001; Elkjaer et al.,

2000; Oshio et al., 2004). In mice, Aqp9 is expressed developmentally in the trophoblast

(Barcroft, Offenberg, Thomsen, & Watson, 2003). Human placentas and peripheral leukocytes

from the blood also express AQP9, although the function has not been fully explored (Damiano,

Zotta, Goldstein, Reisin, & Ibarra, 2001; Ishibashi et al., 1998). AQP9 is also expressed in liver

hepatocytes, where hepatic gluconeogenesis occurs (Rodríguez et al., 2014). In fact, their study

found that AQP9 was the most abundantly expressed aquaporin isoform in the human liver. This

coincides with the function of AQP9 as a glycerol transporter useful for energy metabolism.

Aqp9 is also localized within mitochondrial membranes, where lactate import can influence the

mitochondrial matrix pH and regulate the formation of ROS which may be critical to

chondrocyte hypertrophy (Amiry-Moghaddam et al., 2005).

Concerning regulation, the promoter sequence of Aqp9 features the insulin response element

(IRE) sequence TGTTTTC (-496/-502), sharing homology with core negative IREs found in the

promoters of genes including PEPCK and AQPap/7 (Kuriyama et al., 2002). In their study,

insulin downregulated Aqp9 mRNA expression in cultured hepatocytes and it is expected that

Aqp9 in other organs is transcriptionally suppressed by insulin at the same putative site. Insulin is

a known inducer of chondrogenic differentiation, although conflicting results have been found

(Phornphutkul, Wu, & Gruppuso, 2006; Torres, Andrade, Foncesa, Mello, & Duarte, 2003).

Nevertheless, transcriptional regulation of Aqp9 in varying tissues has been largely unexplored.

Aqp9 expression in hepatocytes is decreased by estrogen in a concentration-dependent manner,

as well by estrogen receptor agonists (Lebeck et al., 2012). As well, Vitamin-D receptor deficient

mice present with lower estrogen levels, higher Aqp9 mRNA expression, and higher estrogen

receptor alpha expression—likely due to compensation for the hormone deficiency (Zanatta et

al., 2017). Estrogen is a gonadal steroid that can promote epiphyseal growth and slow it as well,

and it may use AQP9 as a signalling intermediate to regulate growth during puberty (Nilsson et

al., 2014). Testosterone is also able to rescue Aqp9 expression after estrogen treatment in the

developing rat epididymis, although the effect of steroid hormones on Aqp9 may depend strongly

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on the cell type Aqp9 is expressed in (Pastor-Soler et al., 2010). Hence, the Aqp9 promoter is

known to contain androgen response elements (AREs) and estrogen response elements (EREs)

where hormones can bind to regulate transcription (Joseph, Shur, & Hess, 2011).

A natural phenol, phloretin, is a known inhibitor of AQP9 and has been used as a channel

blocker in a variety of studies (Tsukaguchi et al., 1998; Dibas, Yang, Bobich, & Yorio, 2007;

Calamita et al., 2012). However, phloretin is not AQP9-specific and also affects other proteins

like anion channels (Sabirov, Kurbannazarova, Melanova, & Okada, 2013). AQP9 is a viable

candidate for control of endochondral ossification; however, it needs to be further explored in

both chondrocytes and bone. Here, the expression and function of AQP9 in chondro-osseous

tissues and pathways is described in detail.

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Figure 1.7. Expression and regulation of AQP9 38

AQP9 protein expression has been shown in the mammalian…

Testicles (Leydig cells) Spleen Brain

Spinal cord Trophoblast Placenta

Liver (hepatocytes) Leukocyte Mitochondria

Known AQP9 gene regulation

Regulatory region

Insulin

Downregulates Aqp9 in

hepatocytes through the

insulin response element (IRE)

Estrogen / estrogen receptor agonists

Downregulates Aqp9 in hepatocytes

through the estrogen response

element (ERE)

Testosterone

May upregulate Aqp9 in the

epididymis through the androgen

response element (ARE)

Phloretin

Downregulates Aqp9 activity

AREEREIRE

Known AQP9 protein regulation

Introns and exons

Transcribed region

Inhibitory effect

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1.4.5 H2O2, an inducer of chondrocyte hypertrophy, is transported by AQP9

AQP8 was among the first aquaporin isoforms to be implicated in general ROS transport

(Bienert et al., 2007). It was demonstrated that expression of AQP8 in yeast cells increased their

sensitivity to exogenously supplied H2O2, through observing increased fluorescence in AQP8-

transformed yeast cells supplied with fluorescent-dyed H2O2. Then, AQP3 was shown to import

H2O2 in keratinocytes when stimulated with TNF-α in psoriasis development (Hara-Chikuma et

al., 2015). Watanabe et al. (2016) eventually demonstrated that AQP9 expression in CHO-K1

cells increased H2O2 import with exogenously added H2O2, and that AQP9 silencing in HepG2

cells reduced extracellular import. Their study further used Aqp9 -/- mice to observe suppressed

uptake of H2O2 in knockout erythrocytes and mast cells compared to their WT (wildtype)

counterparts, highlighting a third aquaporin isoform capable of ROS conductance.

The developing epiphyseal plate is typically regarded as hypoxic, where ROS expression has

been shown to increase as well as decrease in separate studies (Schipani et al., 2001; Bell,

Klimova, Eisenbart, Schumacker, & Chandel, 2007; Frandrey, Frede, & Jelkmann, 1994). To

complicate matters, HIF-1α, an oxygen-sensitive component of the transcription factor HIF-1,

does not appear to be expressed linearly with ROS formation (Qutub & Popel, 2008).

Nevertheless, the HIF homologue HIF-2α is important for chondrocyte hypertrophy and its

encoding gene, Epas1, increases in expression alongside other important genes such as Col10a1

and Mmp13 (Saito et al., 2010). As well, AQP9 may be responsible for controlling intracellular

H2O2 levels in the epiphyseal plate chondrocyte mitochondria, where HIF-1α can accumulate in

response to ROS generation (Chandel et al., 2000). Describing the function of AQP9 in

chondrocyte-oriented processes such as endochondral ossification or cartilage degradation would

further clarify its role in chondrocyte activity, possibly through controlled H2O2 uptake.

1.4.6 AQP9 expression is upregulated in osteoarthritis

To suggest that AQP9 affects chondrocyte activity, solely highlighting its conductance of a

known chondrocyte hypertrophy modulator is insufficient—evidence of its gene expression and

functional protein activity in physiological or disease processes is necessary. In patients with

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osteoarthritis and rheumatoid arthritis, AQP9 was detected in their synovial tissues at the RNA

and protein levels (Nagahara et al., 2010). More importantly, osteoarthritic tissues with

hydrarthrosis—irregular fluid accumulation in the knee—featured significantly higher AQP9

mRNA expression than in tissues without. This suggests that in chondrocyte diseases such as

osteoarthritis, AQP9 may not only contribute to abnormal water homeostasis but may also be a

genetic marker of the disorder. Osteoarthritis involves elevated chondrocyte production of

proteolytic enzymes such as MMP13 which subsequently cause cartilage damage and diminished

joint function (van der Kraan & van den Berg, 2012). Given that AQP9 expression parallels the

expression of degradative genes in chondrocyte disease—and that these same genes are

necessary in physiological hypertrophy of chondrocytes during endochondral ossification—the

function of AQP9 in chondrocytes appears to mimic a hypertrophic or inflammatory phenotype.

Another study investigating upregulated genes in human osteoarthritic synovial tissues found

that AQP9 expression was significantly higher among other angiogenic-classified genes when

compared to normal tissues, such as PF4V1 and EDNRB (Lambert et al., 2014). Angiogenesis

and osteogenesis in endochondral ossification are post-hypertrophic processes, suggesting that

AQP9 may favor a non-proliferative chondrocyte phenotype. Whether AQP9 contributes to

hypertrophy in the articular cartilage or epiphyseal plate chondrocytes through water

conductance, H2O2 uptake, an uninvestigated metabolic pathway, or a combination of the

aforementioned is currently unknown. Nevertheless, AQP9 is associated with hypertrophic

chondrocyte gene expression. It may underlie chondrocyte disorders that induce a hypertrophic

phenotype, such as osteoarthritis where type X collagen expression is increased (Walker,

Fischer, Gannon, Thompson, & Oegema, 1995). If AQP9 plays a role in dysregulating

hypertrophy at the articular cartilage, it may also function in chondrocyte regions that undergo

natural hypertrophy—such as the epiphyseal plate. However, a functional study of AQP9 in the

epiphyseal zones has yet to be performed. The identification of AQP9 in the terminal products of

endochondral ossification may highlight a gap in the literature for the channel’s function in the

epiphyseal plate. In particular, it would support that AQP9 is important in the exterior of bone—

at the articular cartilage—as well as in bone tissue itself—in cells or matrix—but is unexplored

in between the two regions. Investigating AQP9 in the epiphyseal plate may describe a novel

gene potentially important to long bone formation.

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1.4.7 Aqp9 expression rises during osteoclast biogenesis

To further support a role of AQP9 in regulating chondrocyte activity and prospective bone

growth, a function of the channel in bone cells would connect these two phases of endochondral

ossification and suggest its importance in the process.

Aharon & Bar-Shavit (2006) hypothesized that Aqp9 would be critical in osteoclast

differentiation due to a significant volume change—like chondrocyte hypertrophy—from their

murine bone marrow macrophage precursors. When differentiated via RANK-L, the subsequent

osteoclasts presented with higher Aqp9 and Mmp9 expression. Mmp9 is a well-known matrix

metallopeptidase that is elevated in rheumatoid arthritis just as Aqp9 is, suggesting the two genes

are active in concert during both chondrocyte dysregulation and osteoclast differentiation. The

RANK-L-stimulated macrophages were then treated with phloretin to investigate if an Aqp9

inhibitor would diminish the differentiation process. The macrophages were unable to survive

the differentiation process, suggesting that Aqp9 plays a critical role in bone cell formation.

However, Liu et al. (2009) compared osteoclasts between Aqp9 WT and -/- mice, discovering

that -/- osteoclasts did not differ in morphology and resorption ability in comparison to their WT

counterparts. Due to phloretin’s capacity to block other channels aside from Aqp9, the -/- mouse

model is more representative of the importance of Aqp9 in osteoclast differentiation.

Nevertheless, they also observed increased Aqp9 expression during differentiation of the pre-

osteoclast cell line, RAW264.7. While Aqp9 -/- chondrocytes have not been explored, the

presence and rise of Aqp9 expression in osteoclasts suggests that Aqp9 may be important at the

culminating steps of endochondral ossification. The two main osteoclast resorption enzymes,

MMP9 and MMP13, are present during osteoarthritic cartilage damage as well as Aqp9

expression. If Aqp9 and Aqp9-affiliated genes play functional roles at the articular and bone

matrix regions respectively, Aqp9 is likely to act in the structure adjoining the two as well—the

epiphyseal plate. Describing roles of Aqp9 in macroscopic bone metabolism would further

clarify its importance throughout the entire endochondral ossification process and resultant bone

tissue formation.

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1.4.8 AQP9 is a possible target for bone loss attenuation and bone length modulation

AQP9 has been described as a target for the prevention of bone loss, suggesting its activity may

span anywhere from the cartilage anlage to post-endochondral ossification structures. Since

endochondral ossification underlies long bone development, it is likely that Aqp9 functions in the

epiphyseal plate and affects bone health. In postmenopausal women, a single nucleotide

polymorphism in intron 1 of AQP9 is associated with increased bone mineral density at the

femoral neck (Chanprasertyothin, Saetung, Rajatanavin, & Ongphiphadhanakul, 2010). Subjects

with a thymine nucleotide rather than an adenine nucleotide at the rs2414539 A/T position had

the highest estimated odds ratio for differential density, suggesting the role of AQP9 in human

bone metabolism. Although the polymorphism is located in an intronic region, it may affect

splice variance and result in AQP9 protein isoforms that behave according to their host cell type

(Wang & Cooper, 2007). Therefore, AQP9 may play an important role in the cells upstream of

bone formation. Interestingly, Aqp9 -/- mice are able to retain more bone tissue after

microgravity-induced bone loss when compared to their WT counterparts (Bu, Shuang, Wu, Ren,

& Hou, 2012). Femoral Aqp9 expression was also elevated during the simulated microgravity,

suggesting that Aqp9 is at least partly responsible for the bone loss observed. The study also

captured postmenopausal effects on Aqp9 expression by checking for femoral bone mineral

density in ovariectomized mice; the lack of estrogen did not change expression and hints that

Aqp9 may be reactive to stressful bone conditions. Aqp9 may therefore play important roles

throughout endochondral ossification and mature bone remodeling.

Previously, the osteoclast findings of Liu et al. (2009) had included comparisons of femur and

tibia lengths between one-year old female Aqp9 WT and -/- C57BL/6 mice; they revealed no

significant difference in bone length between the two genotypes. If Aqp9 is important in bone

development, its functional role may not be apparent in mature bone tissue but rather in the

earlier murine stages before longitudinal growth has slowed. However, a definitive study of

Aqp9 in early postnatal chondrocytes and bone has not yet been made. Examining the long bone

lengths of Aqp9 WT and -/- mice at a time before the juvenile P21 age may determine if

chondrocytes active in endochondral ossification are functionally different in the knockout

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mutation. The use of a mutant model with inactivated Aqp9 will clarify the role of Aqp9 in

epiphyseal chondrocyte activity and long bone growth.

1.5 Aqp9 -/-: an accessible knockout mouse model for epiphyseal

chondrocyte and bone length investigation

Rojek et al. (2007) initially created the Aqp9 -/- mouse to investigate the role of Aqp9 in type 2

diabetes mellitus. In obese type 2 diabetic patients, hepatic glucose production is elevated in part

from the gluconeogenic properties of glycerol. Given that Aqp9 is a glycerol conductor, the

expectation was that inactivation of Aqp9 might reduce the import of the gluconeogenic substrate

and decrease blood glucose levels. Aqp9 -/- mutants feature different metabolic characteristics in

comparison to their heterozygous counterparts that may support the role of Aqp9 in chondrocyte

differentiation. Furthermore, the mutants do not experience any embryonic or early postnatal

mortality, easing dissection and examination of bone and cartilage phenotypes.

1.5.1 Aqp9 -/- mutants have abnormal glycerol metabolism

In comparison to +/- mutants, Aqp9 -/- mutant mice present with increased plasma glycerol and

triglyceride levels after 24 hours of fasting (Rojek et al., 2007). This seemingly contradictory

observation may be credited to compensatory glycerol uptake by the other aquaglyceroporin

isoforms to stabilize glycerol blood levels. Glycerol is a gluconeogenic precursor vital for

phospholipid synthesis, entry into the glycolytic pathway, and conversion to glucose for

metabolic homeostasis and skeletal growth. While the knockdown of Aqp9 would then appear to

dysregulate metabolism, Rojek et al. (2007) further demonstrated that administration of

exogenous glycerol in both genotypes did not result in significantly differential glucose levels

between the two. Hence, the capacity for -/- mutants to generate glucose despite the blockage of

a gluconeogenic precursor conductor suggests they are sufficient in maintaining a relatively

normal whole-body metabolic phenotype. However, the plasma measurements were implicitly

performed in mature mice several weeks past the young pup/neonatal age; the early postnatal

phenotypes were not characterized. The availability of glucose and gluconeogenic precursors

greatly influence the capacity for early bone growth. Maor & Karnieli (1999) demonstrated that

GLUT4, IGF-1, and insulin receptors play critical roles in preventing retardation of skeletal

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growth in P6-P8 mice. Indeed, glucose transporters and insulin-related receptors are critical

components of anabolism in bone (Klein, 2014). Furthermore, epiphyseal plate chondrocyte

proliferation is dependent on the presence of glucose intake, as insulin and IGF-1 are both

capable of promoting chondrogenic differentiation (Zhang et al., 2014). Given that the building

blocks of anabolism in skeletal growth—energy-generating precursors such as glycerol—were

unexplored in the early age Aqp9 -/- mutants where they would have the greatest influence on

bone development, the mouse model presents as a prime candidate for discovering the effects of

Aqp9 in the epiphyseal plate. The uninvestigated glycerol defect in early postnatal mutants

suggests that Aqp9 deletion may induce a possible unique skeletal phenotype.

1.5.2 Mature Aqp9 -/- mutants show superficially normal physical characteristics

In comparison to age-matched WT and +/- littermate controls, the Aqp9 -/- mutants presented

with no apparent differences in body weight and physical appearance. Rojek et al. (2007)

implicitly performed all observations at mature timepoints, as referenced by immunostaining for

Aqp9 protein in 6-week-old littermates, 15-week periods of waiting for development of type 2

diabetes in Leprdb and Aqp9 knockout mice, and 2-week periods of waiting post-shave to prepare

for skin regeneration experiments. Indeed, the body weight measurements that were presented

were reported from 6-14 weeks of age, and only in obese (Leprdb/Leprdb) Aqp9 +/- and -/-

mutants. If physical measurements were indeed made at early postnatal timepoints for Aqp9 -/-

mutants—before the P21 timepoint—it is unlikely they were statistically analyzed due to their

absence of presentation. However, it cannot be excluded that measurements may have been

statistically analyzed but omitted from presentation due to a lack of significant differences. In the

case of epiphyseal plate and long bone length differences, dissection and extraction of the

structures would be necessary for accurate measurement.

Liu et al. (2009) investigated osteoclast function in Aqp9 -/-mutants and extensively

characterized Aqp9 WT femurs and tibias in comparison to their -/- mutant counterparts. They

show that in one-year-old female mice, both genotypes do not differ in femur length, tibia length,

whole-body and long bone density, and osteoclast cell density. In femur and tibia length, Aqp9 -

/- mutants show minor decreases in comparison but without statistical significance. Bone density

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was also measured at 4, 6, and 10 weeks of age in both genotypes and showed no significant

differences, suggesting that mature WT and -/- mice share physically similar bones phenotypes.

However, if Aqp9 plays an important functional role in bone development, it may be apparent

only during timepoints where epiphyseal plate chondrocytes are actively differentiating to

lengthen bone—before approaching maturity, partial epiphyseal plate fusion, and dramatic

retardation of longitudinal growth. To best capture the influence of Aqp9 in epiphyseal plate

chondrocyte activity, experiments should be performed at postnatal timepoints close to the onset

of bone development at E14.0 as endochondral ossification begins. Timepoints ranging between

P0 and P21 would serve as candidates for long bone measurement, where Aqp9 may be

functioning without apparent influence from pubertal skeletal mediators including sex steroids

and growth hormone (Courtland et al., 2011). There are currently no characterizations of early

postnatal Aqp9 -/- mutant mouse epiphyseal plate chondrocytes and long bone length

measurements. Observed differences in long bone length between -/- mutants and their WT or

heterozygous littermates at an appropriate postnatal timepoint—such as P5—would support

Aqp9 as a regulator of chondrocyte activity in the epiphyseal plate.

1.6 Aqp9 has a novel function in cartilage and murine long bone growth

In the developing cartilage anlage, joint-site associated MSCs cease expression of early

chondrocyte markers such as Col2a1 to form the joint menisci (Hyde, Boot-Handford, & Wallis,

2008). MSCs that retain Col2a1 expression in the center of the premature joint—the interzone—

form articular cartilage (Jiang & Tuan, 2015). Although articular cartilage is hyaline, simple, and

generally non-proliferative, these interzonal cells reside where chondrocytes once occupied and

are henceforth undifferentiated chondrocytic descendants (Nalin, Greenlee, & Sandell, 1995).

Articular and epiphyseal plate chondrocytes are then discriminated by their location, function,

and microenvironment despite their common origin. These cell types share conducting pathways

that affect their development and dysregulation. In particular, the Wnt/β-catenin signaling

pathway has been implicated in osteoarthritis development where genes such as Wnt7b and Dkk1

expression levels correlate with osteoarthritic severity (Nakamura, Nawata, & Wakitani, 2005;

Honsawek et al., 2010). This canonical pathway is complex and not only also regulates skeletal

phenotypes—such as Wnt3a and Wnt5a +/- mutants which exhibit lower bone mineral density—

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but may also target lesser known genes and pseudogenes such as those from the aquaporin

families (Okamoto et al., 2014). Here, the Kannu lab has demonstrated the merit of investigating

aquaporin/β-catenin interactions in osteoarthritis and also skeletal bone length.

1.6.1 Inhibition of Aqp9 protects against cartilage damage in humans and mice

Previous work in the Kannu lab identified AQP7P1 as a β-catenin target gene in resected femoral

condyle articular cartilage from patients undergoing total knee replacement for osteoarthritis

(Ma, Vi, Whetstone, Kannu, & Alman, 2014). AQP7 presented with a -2 fold change through

ChIP-sequencing and was not known to be functional in osteoarthritis or a known target of β-

catenin at the time. Dkk1, a target of the β-catenin pathway and ameliorator of osteoarthritis, was

then used to treat articular chondrocyte samples in culture from 5 patients undergoing knee

replacement surgery (Kannu, Weng, Poon, Ali, & Ma, 2015). Interestingly, a microarray showed

that AQP9 was differentially regulated by Dkk1 with a greater than 2-fold change; this supported

that aquaporins from the aquaglyceroporin family appeared to be critical in osteoarthritis

pathogenesis. Aqp9 -/- mice aged to 18 months were then sacrificed and measured for knee

cartilage damage, revealing less osteoarthritis severity in the mutants in comparison to the WT

mice, as determined through the recommended method of OARSI scoring (Glasson, Chambers,

Van den berg, & Little, 2010). Kannu et al. (2015) also demonstrated that 18 month Aqp9 -/-

mice were protected against age-induced cartilage damage in the knee, as measured by decreased

Col10a1 immunohistochemistry staining. With the previous literature regarding Aqp9 in

osteoarthritis, osteoclast biogenesis, and bone mineral density, Ma et al. (2014) and Kannu et al.

(2015) were able to further highlight the importance of aquaporins such as Aqp9 in the articular

region and possibly the growing epiphyseal plate as well. However, preliminary evidence of

Aqp9 function in a mouse model would be required to substantiate this postulation.

1.6.2 Early-aged Aqp9 -/- pups appear to be larger than their WT littermates

During examination of P5 WT and Aqp9 -/- pups, the Kannu lab also noticed that the -/- pups

appeared to be slightly larger than their WT counterparts. These differences were occasionally

observable by eye but complicated by the skin appearance and arrangement of the limbs which

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may have biased interpretations. Initial weight measurements of both genotypes did not reveal

any significant differences, as relayed by colleagues of the Kannu lab. However, even mice that

exhibit skeletal overgrowth defects—such as Fgfr3c -/- mutants—have lower mean body

weights, suggesting that any long bone differences in Aqp9 -/- mice may not necessarily correlate

with their weight measurements (Eswarakumar & Schlessinger, 2007). Instead, performing

skeletal preparations and epiphyseal plate measurements would be necessary in delineating any

particular long bone phenotype. Previous work with the Kannu lab performed preliminary

measurements of Aqp9 -/- Col10a1-stained epiphyseal plate regions at unidentified timepoints

but did not return any significant differences (Yang et al., 2014). Preliminary measurements of

Col2a1-staining in P14 Aqp9 -/- epiphyseal plates also returned no significant differences,

although the proliferative and hypertrophic zones appeared to be partially shorter in height (Shao

et al., 2016). Overall, appropriate replicates of epiphyseal regions would be required alongside

skeletal preparations at various timepoints to identify Aqp9 as a regulator of epiphyseal

chondrocyte function. Furthermore, characterizing any remarkable transport function of Aqp9 -/-

chondrocytes at the in vitro or in vivo level would support its role in modulating the epiphyseal

plate and long bone growth.

1.6.3 Aqp9 may be a critical regulator of chondrocyte proliferation, hypertrophy, and

long bone growth

With the Kannu lab, Shao et al. (2016) also demonstrated that Aqp9 -/- knee epiphyseal

chondrocytes treated with 1 mM H2O2 were more viable than their WT counterparts after 24

hours. This result substantiates that H2O2 transport in Aqp9 -/- chondrocytes is reduced and is

able to elicit an anti-apoptotic effect. Furthermore, examination of intracellular H2O2

concentrations after treatment showed a >0.01 mM reduction in the Aqp9 -/- chondrocytes. The

proportion of apoptotic cells was then measured after treatment through Annexin V and

propidium iodide gating in flow cytometry, showing a >20% reduction in the Aqp9 -/- group. If

these epiphyseal plate chondrocytes are capable of resisting apoptosis induced by exogenous

means, they may also be resistant in physiological environments where a reduction of

intracellular H2O2 may affect gene expression, chondrocytic phenotype, and ultimately long bone

growth. Indeed, Shao et al. (2016) found that Mmp13 expression in Aqp9 -/- chondrocytes was

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>6-fold less in comparison to WT chondrocytes post-treatment. The expression of Sox9 was

conversely >1.5 fold greater, suggesting that Aqp9 deletion supports chondrocytic retention of

the proliferative phenotype. Taken together, the Kannu lab has demonstrated that Aqp9 may be

important in regulating epiphyseal plate chondrocyte gene expression and directing their fate

toward long bone growth. H2O2 may also be the main substrate blocked to resist the hypertrophic

phenotype. Nevertheless, scrutiny of the long bones, epiphyseal plates, and chondrocyte gene

expression of Aqp9 -/- mutants at pup, juvenile, and old age timepoints are required to test this

hypothesis. My Master’s thesis project is to further characterize any purported long bone

phenotypes in Aqp9 -/- mice and study their essential structures: epiphyseal plate zones and

chondrocyte gene profiles.

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2 Research Aims, Hypothesis, and Summary Plan

Investigating the epiphyseal plate and chondrocyte behavior can provide insight into new

mechanisms by which long bones grow. Specific experiments must be planned to measure the

long bones, epiphyseal plate zones, and chondrocyte activity in both control and test groups.

Aqp9 is a transporter of H2O2 and expressed in articular cartilage and osseous tissues, but

unexplored in the epiphyseal plate. I hypothesized that Aqp9 is a regulator of epiphyseal plate

chondrocyte proliferation, hypertrophy, and long bone growth. Here, the significance and

structure of the investigation are described.

2.1 Rationale

Chondrocyte hypertrophy, where massive fluid uptake is performed, is the largest contributor to

long bone growth during endochondral ossification (Cooper et al., 2013). Given that the

channelome comprises the set of membrane ion channels and porins that dictate chondrocyte

function, aquaporins may be responsible for governing how chondrocytes differentiate in the

epiphyseal plate (Mobasheri et al., 2018). Aqp9 is an isoform capable of transporting diverse

substrates across the membrane and potentially influencing chondrocyte gene expression

(Tsukaguchi et al., 1999). Aqp9 is important in articular cartilage and in the bone shaft where

osteoclasts function (Kannu et al., 2015; Liu et al., 2009). However, the function of Aqp9 at their

structural intermediary—the epiphyseal plate—is unclear.

2.2 Hypothesis

Preliminary findings in the Kannu lab have shown that Aqp9 deletion is protective against

chondrocyte hypertrophy, but analysis of the Aqp9 -/- skeletal and epiphyseal plate phenotype

has not been completed. I hypothesized that Aqp9 is a regulator of epiphyseal plate chondrocyte

proliferation, hypertrophy, and long bone growth. As Aqp9 is a transporter of H2O2, an inducer

of chondrocyte hypertrophy, Aqp9 -/- mice epiphyseal plates may present with dysregulated

hypertrophy.

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2.3 Objectives

2.3.1 Objective 1: Long bone measurements of WT and Aqp9 -/- mice

To continue the preliminary findings of the Kannu lab, the first aim of this study was to

determine if long bone differences existed between WT and Aqp9 -/- littermate mice. Full-body

dissections of mice at the pup age (P5) and male mice at the juvenile age (P21) were performed

to liberate whole skeletons for skeletal preparation staining (Mitchell, Gould, Smolik, Koek, &

Daws, 2013; Rigueur & Lyons, 2014). Finished skeletons were photographed, then further

dissected to isolate long bones for manual and digital measurement. Measurements were

analyzed to observe for any statistical significance.

2.3.2 Objective 2: Epiphyseal plate analysis of WT and Aqp9 -/- mice

The second aim of the study was to examine the long bone epiphyseal plate zones of WT and

Aqp9 -/- mice to determine if differences in zone heights existed. In situ hybridization of Aqp9 to

the WT epiphyseal plate was performed to confirm gene expression. H&E staining of P5

epiphyseal plates was performed to observe any differences in zone heights. Col10a1

immunohistochemistry of P21 epiphyseal plates was performed to observe if Col10a1, a marker

of hypertrophy, stained differently between the WT and Aqp9 -/- mice. Toluidine blue staining of

18 month old mice was performed to observe any differences in epiphyseal line fusion. To

observe if Aqp9 deletion affected the epiphyseal plate at the developmental stage, E16.5 embryo

epiphyseal plates were stained with Safranin-O to visualize the chondrocyte distribution. All

epiphyseal plate zone heights were quantified and analyzed for statistical significance.

2.3.3 Objective 3: Primary chondrocyte analysis of WT and Aqp9 -/- mice

The third aim of the study was to determine the proliferation rate and gene profile of WT and

Aqp9 -/- epiphyseal plate chondrocytes. P5 WT and Aqp9 -/- primary chondrocytes were seeded

at 100,000 cells and counted daily over 96 hours. Cell counts were analyzed for statistical

significance to determine if Aqp9 -/- chondrocytes had a proliferation defect. Whole RNA from

P5 WT and Aqp9 -/- primary chondrocytes was also extracted to synthesize cDNA for qPCR

analysis with probes for Aqp9 and other markers of proliferation and hypertrophy. P5 WT

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primary chondrocytes were also cultured with an Aqp9-siRNA, harvested for whole RNA

extraction, and used for cDNA synthesis for qPCR analysis with the aforementioned probes.

2.4 Clinical significance

Leg length discrepancies (LLDs) are inequalities in the length of the lower limbs that can arise

from anatomical or functional means (Murray & Azari, 2015). Anatomical LLD is characterized

by actual bone asymmetry in the lower limbs, whereas functional LLD is characterized by

abnormalities in other structures—such as the lower spine or pelvis—that result in apparent

shortening of one leg (Gurney, 2002; Subotnick, 1981). LLDs are universal and affect up to 90%

of the population with a mean length inequality of 5.2mm between the lower limbs (Knutson,

2005). However, deviations from this discrepancy can alter the weight-bearing capacities of the

lower extremities and contribute to osteoarthritis, scoliosis, lower back pain, and gait disruption

(Golightly, Allen, Helmick, Renner, & Jordan, 2009; Raczkowski, Daniszewska, & Zolynski,

2010; Kaufman, Miller, & Sutherland, 1996). Currently, the only interventions are physical

methods—such as shoe lifts for mild cases—or surgery—such as bone resection, mechanical

lengthening, or guided growth in severe cases (Brady, Dean, Skinner, & Gross, 2003; Hasler,

2000). These procedures are complex, invasive, and often depend on extensive rehabilitation.

Hence, there is a continuous need to determine the mechanisms underlying long bone growth in

order to identify therapeutic targets and create effective treatments.

2.5 Cellular mechanisms

LLDs can be congenital—through disorders such as dysplasias—or acquired through trauma, and

the root mechanism lies in dysregulated long bone growth (Murray & Azari, 2015). Long bone

growth occurs at the epiphyseal plate through the process of endochondral ossification. Here,

chondrocytes proliferate, undergo hypertrophy, and undergo apoptosis or transdifferentiate into

osteoblasts to allow for bone formation (Mackie et al., 2008). Each of these stages are highly

regulated by expression of key marker proteins including SOX9, BMPs, RUNX2, and FGFs

(Long & Ornitz, 2013). Among others, these transcription factors dictate chondrocyte division

capacity, shape, and expression of specific cartilage matrix collagens. Deletion of these critical

genes often results in dysregulation of chondrocyte activity, malformed epiphyseal plates during

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development, and ultimately shortened and disfigured long bones. However, the contribution of

each protein isoform is variant: in FGFs, Fgfr3 -/- mice have longer bones than their WT

counterparts (Su et al., 2010). This suggests that Fgfr3 negatively regulates long bone growth.

Overall, investigating the expression of unique marker genes at each stage of epiphyseal plate

chondrocyte differentiation may provide insight into factors which may be controlled to

ameliorate LLDs.

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3 Methods

3.1 Mouse creation, maintenance, genotyping, and age selection

The Aqp9 mutant mouse model was generated by substituting 55 nucleotides of exon 2 in Aqp9

with a neomycin phosphotransferase expression cassette, resulting in correct translation of the

first 47 amino acids, then 100 randomized amino acids, and then a stop codon. RT-PCR with

customized primer pairs confirmed the mutated Aqp9 gene and western blotting with the

AQP9A-1 primary antibody confirmed the absence of Aqp9 protein in the mutants. Aqp9 +/-

mutants were crossed with a C57BL/6 mouse background and initial heterozygote crosses

produced offspring expected of Mendelian ratios, suggesting that -/- mutants can be bred without

difficulty. No embryonic or early postnatal mortality is present in the mutants. The Aqp9 mutants

were a generous gift imported by Dr. Soren Nielsen from Aarhus University, Denmark. Mice

used in this study were housed in standardized cages at The Centre for Phenogenomics (TCP) in

Toronto, ON according to their guidelines. General mouse maintenance was performed by

employees at TCP. For the genotyping of embryonic and pup stage mice, yolk sacs and tail clips

were harvested respectively and digested in 50ul of QuantaBio Extraction Reagent for 30

minutes. Then, 50ul of QuantaBio Stabilization Buffer was added to neutralize the mixture. 2uL

of DNA was used for PCR. For genotyping of juvenile and old mice, ear notches were made by

employees at TCP and sent to Transnetyx, Inc. for DNA analysis.

For specific experiments, the P5 age was selected to investigate endochondral ossification at the

pup stage where pubertal growth has not yet occurred. The P14 age was selected to best visualize

the discrete zones of the epiphyseal plate. The P21 age was selected to investigate endochondral

ossification at the juvenile stage where pubertal growth and early adolescence has begun. The 18

month age was selected to investigate a timepoint where the epiphyseal plate is senescent.

3.2 In situ hybridization

RNA digoxigenin-dUTP-labeled riboprobes were created from linearized template DNA

plasmids for Aqp9. Riboprobes were synthesized using a DIG-labeling mix (Roche) according to

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the manufacturer’s instructions and precipitated in 5M LiCl DEPC, 100% ethanol at -80°C for 2

hours. The riboprobes were resuspended in 75ul sterile DEPC-water, 75ul formamide and stored

at -80°C until usage. In brief, mouse lower limbs were harvested in cold DEPC-PBS, embedded

in paraffin blocks, and sectioned. Slides were prepared through a xylene/DEPC-ethanol/DEPC-

PBS/PFA/TEA solution series and then air dried. Hybridization buffer (distilled formamide, 20x

DEPC-SSC pH 4.5, 10% DEPC-SDS, and 20mg/ml heparin) was warmed at 85°C prior to

addition of the riboprobes. Riboprobes were then added and hybridization was performed

overnight at 55°C. After a post-hybridization SSC/formamide/TNE/TBST wash series, slides

were blocked with blocking reagent (Roche) for 1 hour. Anti-DIG antibody (1:2000, Roche) was

then added for room temperature incubation, for 1 hour. BM purple colour substrate (Roche) was

used for colour development over 8-20 hours. The colour reaction was stopped with a distilled

water/100% ethanol/xylene rinse series. Slides were then mounted in Permount and covered in

coverslips for air drying.

3.3 Skeletal staining

For staining of bone and cartilage, whole skeletons were dissected from mice and fixed in 95%

ethanol for 48 hours in room temperature. Then, skeletons were submerged in Alcian blue

staining solution (2.5ml 0.3% Alcian Blue SGS (Sigma), 10ml glacial acetic acid, and 40ml

ethanol) for 48 hours at 37°C. Alcian blue staining solution was replaced with 95% ethanol daily

over 3 days. Skeletons were then submerged in Alizarin red staining solution (0.5ml 0.2%

Alizarin Red S (Sigma), 5ml 10% KOH, and 45ml distilled water) for 24 hours in room

temperature. Alizarin red staining solution was then replaced with 20% glycerol, 1% KOH for 3

days in room temperature and then 50% glycerol, 1% KOH until muscle and fat tissue was

dissolved. The dissolving step varied in time depending on the mouse size. Skeletons were then

stored in 80% glycerol for 24 hours and then 100% glycerol for long-term storage.

3.4 Staining and immunohistochemistry of epiphyseal plates

Mouse limbs were harvested in PBS and stored in 70% ethanol prior to paraffin embedding and

sectioning. Limbs were then paraffin embedded and sectioned. Slides were rehydrated in a

100%/90%/70%/50% ethanol series, then washed twice in distilled water for 3 minutes. For

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H&E staining, slides were then immersed in 0.3% ammonium hydroxide for 20 dips and rinsed

twice in water for 1 minute, followed by immersion in Eosin Y certified biological stain (Fisher

Scientific) for 10 dips. For Toluidine blue staining, slides were then immersed in 1% Toluidine

Blue O (Sigma) for 10 minutes. For Safranin-O staining, slides were then immersed in Weigert’s

iron hematoxylin solution (Sigma) for 10 minutes and rinsed in distilled water followed by

immersion in 1% Safranin O (Sigma) for 5 minutes. After all staining procedures, slides were

washed in water thrice for 1 minute, dehydrated in a 95%/100% ethanol and xylene series, then

mounted and covered. For immunohistochemistry, slides were then bleached in 6% H2O2 for 6

hours, followed by rehydration in 1% Tween-20 in PBS. Blocking was performed with sheep

serum:DMSO 4:1 and then incubated in antibody solution containing 1:100 anti-phosphorylated

H3 antibody (Cell Signaling Technology) for 24 hours at 4°C. After a wash series of 1% Tween-

20 in PBS, slides were incubated in an antibody solution containing 1:200 HRP-conjugated

secondary antibody. Slides were then covered in DAB and incubated for 20 minutes for the

colour reaction to occur. Then, slides were mounted and covered.

3.5 Visualization and measurement of limbs and epiphyseal plates

Skeletal staining preparations of mice were photographed with a Canon DSLR over a backlight

and self-made cardboard aperture to maintain the same magnification. A ruler was placed in each

shot for measurement references, and images were rotated in ImageJ and PowerPoint.

Measurements of limbs were performed using a Mastercraft digital caliper. The measurements

were performed blinded and each bone was measured twice with its averaged value reported for

statistical analyses.

For P5 mice, humerus bones were measured from the most proximal staining point (at the

articulation with the distal glenoid cavity) to the most distal staining point (at the articulation

with the proximal ulnar aspect). Femur bones were measured from the most proximal staining

point (at the articulation with the distal acetabulum) to the most distal staining point (preceding

the knee femoral cartilage). Tibia bones were measured from the most proximal staining point

(proceeding the knee tibial cartilage) to the most distal staining point (at the articulation with the

talus bone). For P21 mice, humerus bones were measured from the most proximal staining point

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(at the head of the humerus) to the most distal staining point (at the condyle). Femur bones were

measured from the most proximal staining point (the femoral head and greater trochanter) to the

most distal staining point (at the femoral condyles). Tibia bones were measured from the most

proximal staining point (the head and tuberosity) to the most distal staining point (at the

malleoli). Skull condylo-basal lengths were measured from the most anterior aspect of the nasal

bone to the most posterior aspect of the braincase.

Epiphyseal plates were visualized and photographed microscopically, then transferred to ImageJ

and PowerPoint for cropping. Measurements of epiphyseal plate zones and cellularity were

performed using ImageJ, then recorded using the Region of Interest (ROI) Manager. The

measurements were also performed blinded and each replicate was measured twice with its

averaged value reported for statistical analyses.

3.6 Primary chondrocyte culture, qPCR, and RNA silencing

Epiphyseal cartilage tissue was excised from mouse limb knee joints in PBS and digested in

1mg/ml Pronase powder (Sigma) for 1 hour at 37°C. The tissue contained all cartilage normally

stained by Alcian blue in the knee region. The tissue was digested in 0.5mg/ml Collagenase P

powder (Sigma) for 24 hours at 37°C. Chondrocytes were re-suspended in PBS and plated in

Dulbecco’s Modified Eagle Medium F/12 (Gibco) with 5% anti-anti and 10% fetal bovine

serum. Cell counting was performed using a manual counter and ThermoFisher Scientific

Countess® Automated Cell Counter. RNA was extracted using the RNeasy Mini Kit (Qiagen)

according to manufacturer’s instructions. RNA was then reverse transcribed into cDNA using a

SuperScriptTM VILOTM cDNA Synthesis Kit (Invitrogen) according to manufacturer’s

instructions. Gene probe primers were designed using Primer3 Version 4.0.0 to target the exon-

exon junctions of murine mRNA. Design parameters included primer sizes of 18-30bp, Tm of 58-

60°C, and GC content of 40-60%. Reactions were performed using Fast Evagreen® qPCR

Master Mix (Biotium) according to manufacturer’s instructions, and run on the ViiA 7 Real-

Time PCR System (Agilent Technologies) with actin and GAPDH controls. RNA silencing was

performed using the Lipofectamine® 2000 Reagent (Invitrogen) kit according to manufacturer’s

instructions. Primary chondrocytes were cultured until ~50% confluency in 6-well plates for

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transfection. 100pmol Aqp9 siRNA oligomer was diluted in 250ul Opti-MEM® Medium. 5ul

Lipofectamine® 2000 was diluted in 250ul Opti-MEM® Medium and incubated for 5 minutes at

room temperature. The diluted mixture was incubated for 20 minutes at room temperature. The

mixture was made for each chondrocyte sample and added to each well for 48 hours of

incubation at 37°C. An equimolar diluted control siRNA (Santa Cruz Biotechnology) was added

to control wells. RNA extraction, cDNA synthesis, and qPCR were then performed.

3.7 Statistical analyses

Data (mouse weights, bone measurements, epiphyseal plate measurements, chondrocyte

experiments, etc.) were analyzed using the Student’s two-tailed heteroscedastic t test by

comparing all test groups (heterozygous, knockout, silenced, etc.) to corresponding control

groups (wildtype, wildtype with control, etc.). The ANOVA test was not utilized as multiple

group comparisons were not performed in any analyses. Significance was defined as the p-value

(P), with *P <0.05, **P <0.01, ***P <0.001. Means and error bars were graphed using

Microsoft Excel chart and error bar formatting tools.

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4 Results

4.1 Body weight and superficial comparisons of WT and Aqp9 -/- mice

Mice were selected at the pup/neonatal age (P5), juvenile age (P21), and old age (18 months old)

for imaging and mean body weight measurements. This would serve to determine if any

superficial body size differences existed across the Aqp9 -/- mouse lifespan. At the P5 timepoint,

the mice were not sexed due to sex determination unreliability. Whole body differences due to

sex are typically unobservable at this age (Schlomer et al., 2013; Bouleftour et al., 2014). At the

P21 and 18 month timepoints, male mice were used to prevent any sex-specific body weight

differences.

At P5, decapitated WT and Aqp9 -/- pups do not appear to differ significantly in body size or

average body weight (Figure 4.1A, 4.1D). At P21, WT and Aqp9 -/- juvenile mice also appear

superficially similar and do not differ significantly in average body weight (Figure 4.1B, 4.1E).

18 month old WT and Aqp9 -/- mice display the same characteristics (Figure 4.1C, 4.1F). The

measurements at the three timepoints charted over time show consistent body weights between

WT and Aqp9 -/- mice.

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Figure 4.1. Body weight and superficial comparisons of WT and Aqp9 -/- mice

Side-by-side physical appearance comparison of WT and Aqp9 -/- mice at P5 to observe any

superficial differences at the pup stage (A). n=6.

A

WT Aqp9 -/- 5cm

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Figure 4.1. cont.

Side-by-side physical appearance comparison of WT and Aqp9 -/- mice at P21 to observe any

superficial differences at the juvenile stage (B). n=6.

WT Aqp9 -/- 10cm

B

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Figure 4.1. cont.

Side-by-side physical appearance comparison of WT and Aqp9 -/- mice at 18-months of age to

observe any superficial differences at the mature stage (C). n=3.

WT Aqp9 -/- 10cm

C

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Figure 4.1. cont.

Body weight measurements of WT and Aqp9 -/- mice at P5 (D), P21 (E), and 18 months of age

(F). n=6, 6, and 3 respectively. Average body weights of WT and Aqp9 -/- plotted over time (G).

Student’s two-tailed t test was performed for statistical analysis, with the level of significance set

at *P < 0.05.

0

5

10

15

20

25

30

35

40

P5 P21 5 mos.

Avera

ge w

eig

ht

(g)

Mouse age

WT

Aqp9 -/-

0.00

1.00

2.00

3.00

4.00

5.00

WT Aqp9 -/-

Ave

rag

e w

eig

ht (g

) N.S

0.00

2.00

4.00

6.00

8.00

10.00

12.00

14.00

WT Aqp9 -/-

Ave

rag

e w

eig

ht (g

) N.S

0.00

5.00

10.00

15.00

20.00

25.00

30.00

35.00

40.00

WT Aqp9 -/-

Ave

rag

e w

eig

ht (g

) N.S D E F

G

P5 P21 18 months

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4.2 Histological analysis of Aqp9 expression in the juvenile epiphyseal

plate

Aqp9 expression was checked in the P14 WT mouse epiphyseal plate to confirm that Aqp9 is

normally present in the area where endochondral ossification occurs. In situ hybridization of

Aqp9 in the proximal tibia epiphyseal plate from dissected lower limbs was performed using an

Aqp9 DIG-labeled RNA probe (Figure 4.2A).

The transcript was detected in specific regions of the epiphyseal plate using the antisense probe.

Aqp9 is expressed in chondrocytes in the proliferating zone, as observed by the violet columns of

stacked cells. Furthermore, Aqp9 is strongly expressed in chondrocytes in the pre-hypertrophic

zone, as observed in the dark violet lower portions of the columns as chondrocytes begin to

deviate from their columnar organization. In the hypertrophic zone, Aqp9 staining is not robust

and suggests that Aqp9 is not expressed there. The sense probe produced less prominent staining

of Aqp9 in the epiphyseal plate, suggesting that the antisense probe is transcript specific (Figure

4.2B).

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Figure 4.2. Histological analysis of Aqp9 expression in the juvenile epiphyseal plate

In situ hybridization of Aqp9 using the Aqp9 antisense probe in the WT P14 proximal tibia (A)

and with its corresponding sense probe (B). The gene can be detected in the proliferating and

pre-hypertrophic zones of the epiphyseal plate. R = resting zone, P = proliferating zone, PH =

pre-hypertrophic zone, H = hypertrophic zone, OC = ossification centre.

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4.3 Skeletal staining of P5 WT and Aqp9 -/- mice

P5 mice were sacrificed and dissected for whole-mount skeletal staining. This experiment served

to identify if any long bone phenotype existed in neonatal mice with Aqp9 deletion. The staining

protocol was used to digest excess muscle and fat tissue, stain cartilage with Alcian blue, and

stain bone with Alizarin red to identify skeletal regions for accurate measurement. No gross body

differences are observable between WT and Aqp9 -/- mice (Figure 4.3A). Isolation of the upper

limb and scapula show no significant difference between the average Aqp9 -/- humerus bone

length in comparison to the WT humerus bone (Figure 4.3B, 4.3F, 4.3G). Isolation of the lower

limb shows that the average Aqp9 -/- femur bones also show no significant difference compared

to their WT counterparts, but the tibia bones are significantly different (Figure 4.3C, 4.3H, 4.3I,

4.3J, 4.3K).

To determine the overall percent differences between P5 WT and Aqp9 -/- long bones, the right

and left humerus, femur, and tibia bones from each biological replicate were grouped according

to bone type. The average Aqp9 -/- long bone length was divided by the average WT long bone

length to determine the percent change. The Aqp9 -/- humerus (Figure 4.3L) and femur (Figure

4.3M) bones do not show any significant percent differences compared to their WT counterparts

on average. The Aqp9 -/- tibia bones (Figure 4.3N) are significantly longer compared to their WT

counterparts on average. To test if the Aqp9 -/- long bone observation was specific to bone

formation and not affecting other organs, excised spleens from P5 WT and Aqp9 -/- mice were

weighed (Figure 4.3E). No gross differences in appearance or weight were observed, suggesting

that the mutation does not cause full body overgrowth (Figure 4.3O).

Furthermore, to test if the Aqp9 -/- long bone observation was specific to endochondral

ossification, P5 WT and Aqp9 -/- skulls were measured for their condylo-basal lengths (Figure

4.3D). The condylo-basal length is the length of the skull. No gross differences in skull length or

size were apparent, suggesting that the rate of intramembranous ossification—how skulls form—

may not be affected by the mutation (Figure 4.3P).

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A

B

50mm

WT Aqp9 -/-

WT Aqp9 -/-

10mm

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67

Aqp9 -/-WT

25mm

D

C WT Aqp9 -/-

10mm

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Figure 4.3. Skeletal staining of P5 WT and Aqp9 -/- mice

Images of WT and Aqp9 -/- whole body lengths (A), humerus bones (B), femur and tibia bones

(C), and condylo-basal lengths (D) stained with Alcian blue and Alizarin red for cartilage and

bone identification. Green lines indicate the observable ossified regions. Excised spleens are

shown as well (E).

WT Aqp9 -/-

10mm

E

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69Right Humerus Left Humerus

Right Femur Left Femur

Right Tibia Left Tibia

0

1

2

3

4

5

6

WT Aqp9 -/-

Avera

ge length

(m

m)

Mouse genotype

N.S

0

1

2

3

4

5

6

WT Aqp9 -/-

Avera

ge length

(m

m)

Mouse genotype

N.S

0

1

2

3

4

5

6

WT Aqp9 -/-

Avera

ge length

(m

m)

Mouse genotype

N.S

0

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2

3

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6

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Avera

ge length

(m

m)

Mouse genotype

N.S

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6

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Avera

ge length

(m

m)

Mouse genotype

*

0

1

2

3

4

5

6

WT Aqp9 -/-

Avera

ge length

(m

m)

Mouse genotype

*

F G

H I

J K

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Humerus Femur

Tibia

Figure 4.3. cont.

Measurements of WT and Aqp9 -/- right humerus bones (F), left humerus bones (G), right femur

bones (H), left femur bones (I), right tibia bones (J), and left tibia bones (K). Average percent

differences of Aqp9 -/- humerus bones (L), femur bones (M), and tibia bones (N) compared to

their WT counterparts. n=5. Student’s two-tailed t test was performed for statistical analysis

comparing WT to Aqp9 -/- measurements, with the level of significance set at *P < 0.05.

75%

80%

85%

90%

95%

100%

105%

110%

115%

120%

125%

WT Aqp9 -/-

Avera

ge p

erc

ent

diffe

rence

Mouse genotype

N.S

75%

80%

85%

90%

95%

100%

105%

110%

115%

120%

125%

WT Aqp9 -/-

Avera

ge p

erc

ent

diffe

rence

Mouse genotype

N.S

75%

80%

85%

90%

95%

100%

105%

110%

115%

120%

125%

WT Aqp9 -/-

Avera

ge p

erc

ent

diffe

rence

Mouse genotype

*

L M

N

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Figure 4.3. cont.

Measurements of WT and Aqp9 -/- excised spleen weights (O). n=3. Measurements of WT and

Aqp9 -/- condylo-basal lengths (P). n=5. Student’s two-tailed t test was performed for statistical

analysis comparing WT to Aqp9 -/- measurements, with the level of significance set at *P < 0.05.

0

1

2

3

4

5

6

7

8

9

10

WT Aqp9 -/-

Avera

ge s

ple

en w

eig

ht

(mg)

Mouse genotype

N.S

0

5

10

15

20

WT Aqp9 -/-

Avera

ge c

ondyl

o-b

asal

length

(m

m)

Mouse genotype

N.S

O

P

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4.4 Skeletal staining of P21 WT and Aqp9 -/- mice

P21 male mice were sacrificed and dissected for whole-mount skeletal staining. This experiment

served to identify if the P5 bone phenotype persisted from the neonatal stage to the juvenile

stage. The same Alcian blue-Alizarin red staining protocol was used to identify the skeleton

elements for accurate measurement. Gross body differences are not apparent between the WT

and Aqp9 -/- mice (Figure 4.4A). Isolation of the upper limb and scapula show no significant

difference between the average Aqp9 -/- humerus bone length in comparison to the WT humerus

bone (Figure 4.4B, 4.4F, 4.4G). Isolation of the lower limb shows that the average Aqp9 -/- tibia

bones also show no significant difference compared to their WT counterparts, but the femur

bones are significantly different (Figure 4.4C, 4.4H, 4.4I, 4.4J, 4.4K).

To determine the overall percent differences between P21 WT and Aqp9 -/- long bones, the right

and left humerus, femur, and tibia bones from each biological replicate were grouped according

to bone type. The average Aqp9 -/- long bone length was divided by the average WT long bone

length to determine the percent change. The Aqp9 -/- humerus (Figure 4.4L) and tibia (Figure

4.4N) bones do not show any significant percent differences compared to their WT counterparts

on average. The Aqp9 -/- femur bones (Figure 4.4M) are significantly shorter compared to their

WT counterparts on average.

To test if the P21 Aqp9 -/- bone observation was specific to bone formation and not affecting

other organs, excised spleens from P21 WT and Aqp9 -/- mice were weighed (Figure 4.4E). No

gross differences in appearance or weight were observed, suggesting that the mutation does not

cause full body dwarfism (Figure 4.4O). Furthermore, to test if the Aqp9 -/- short bone

observation was specific to endochondral ossification, P5 WT and Aqp9 -/- skulls were measured

for their condylo-basal lengths (Figure 4.4D). No gross differences in skull length or size were

apparent, similar to the P5 mice. This suggests that the rate of intramembranous ossification—

how skulls form—may not be affected by the mutation at this timepoint either (Figure 4.4P).

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Aqp9 -/-WT

100mm

A

B

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C

D

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Figure 4.4. Skeletal staining of P21 WT and Aqp9 -/- mice

Images of WT and Aqp9 -/- whole body lengths (A), humerus bones (B), femur and tibia bones

(C), and condylo-basal lengths (D) stained with Alcian blue and Alizarin red for cartilage and

bone identification. Green lines indicate the observable ossified regions. Excised spleens are

shown as well (E).

E

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Right Humerus Left Humerus

Right Femur Left Femur

Right Tibia Left Tibia

0

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ge length

(m

m)

Mouse genotype

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m)

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Avera

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(m

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Mouse genotype

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F G

H I

J K

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Humerus Femur

Tibia

Figure 4.4. cont.

Measurements of WT and Aqp9 -/- right humerus bones (F), left humerus bones (G), right femur

bones (H), left femur bones (I), right tibia bones (J), and left tibia bones (K). Average percent

differences of Aqp9 -/- humerus bones (L), femur bones (M), and tibia bones (N) compared to

their WT counterparts. n=6. Student’s two-tailed t test was performed for statistical analysis

comparing WT to Aqp9 -/- measurements, with the level of significance set at *P < 0.05.

75%

80%

85%

90%

95%

100%

105%

110%

115%

120%

125%

WT Aqp9 -/-

Avera

ge p

erc

ent

diffe

rence

Mouse genotype

N.S

75%

80%

85%

90%

95%

100%

105%

110%

115%

120%

125%

WT Aqp9 -/-

Avera

ge p

erc

ent

diffe

rence

Mouse genotype

*

75%

80%

85%

90%

95%

100%

105%

110%

115%

120%

125%

WT Aqp9 -/-

Avera

ge p

erc

ent

diffe

rence

Mouse genotype

N.S

L M

N

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Figure 4.4. cont.

Measurements of WT and Aqp9 -/- excised spleen weights (O). n=2. Measurements of WT and

Aqp9 -/- condylo-basal lengths (P). n=6. Student’s two-tailed t test was performed for statistical

analysis comparing WT to Aqp9 -/- measurements, with the level of significance set at *P < 0.05.

10

11

12

13

14

15

16

17

18

19

20

WT Aqp9 -/-

Avera

ge s

ple

en w

eig

ht

(mg)

Mouse genotype

N.S

0

5

10

15

20

25

WT Aqp9 -/-

Avera

ge c

ondyl

o-b

asal

length

(m

m)

Mouse genotype

N.S

O

P

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4.5 Histological analysis of P5 WT and Aqp9 -/- epiphyseal plates

P5 WT and Aqp9 -/- littermate distal femur epiphyseal plates were sectioned and stained with

H&E to visualize their chondrocyte distributions. This would help support if dysregulation in the

epiphyseal plate influenced the P5 bone phenotype. The femur was selected rather than the tibia

due to the availability of sections. Furthermore, all mouse models previously described with long

bone phenotypes—including those with phenotypes in specific bones only—have spatial

irregularities in those epiphyseal plate zones. Investigating the tibia epiphyseal plate was

determined to be repetitious. As the long bone phenotypes observed at both P5 and P21 were

isolated to the hindlimb only, the hindlimb remained of interest. Hence, the adjoining epiphyseal

plate at the distal femur was selected for histological analysis.

An overview of the epiphyseal plates show subtle spatial differences near the top of the

proliferating zone in Aqp9 -/- mice in comparison to WT mice (Figure 4.5A, 4.5B). Image

enlargement shows the chondrocyte distribution ranging from the resting zone to the

hypertrophic zone (Figure 4.5C, 4.5D). In the WT epiphyseal plate, the proliferating zone is

separated from the resting zone by a clear boundary where chondrocytes are different in shape

and distribution. The proliferating chondrocytes are flat and columnar, while resting

chondrocytes are rounder and randomly dispersed with less organization. In the Aqp9 -/-

epiphyseal plate, chondrocytes at the top of the proliferating zone become gradually rounder but

retain columnar organization transitioning into the resting zone.

The Aqp9 -/- proliferating zone appears expanded in comparison to the WT proliferating zone.

The pre-hypertrophic zones of WT and Aqp9 -/- epiphyseal plates are demarcated by where

chondrocytes at the bottom of the proliferating zones begin to lose their columnar organization

and have enlarged cytoplasmic regions. No differences in pre-hypertrophic zone height are

apparent. The hypertrophic zones are demarcated by where the chondrocytes are engulfed in

round and pale cytoplasm and lose their H&E staining, up until the heavily stained bone matrix

at the bottom of the epiphyseal plate.

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80

Proliferating and hypertrophic zone heights were measured by drawing five vertical lines across

each zone per biological replicate and averaging their heights. Statistical analysis of the

proliferating and hypertrophic zone heights show that proliferating zones in P5 Aqp9 -/-

epiphyseal plates are significantly taller than their WT counterparts (Figure 4.5E). No significant

differences in hypertrophic zone height were observed.

The average number of chondrocytes per column in proliferating and hypertrophic zones were

quantified by counting the number of chondrocytes that passed through each vertical line and

averaging them. Aqp9 -/- proliferating zones have significantly more chondrocytes per column in

comparison to their WT counterparts (Figure 4.5F). No significant differences were observed in

the hypertrophic zone.

The cellular density of proliferating and hypertrophic zones, in cells/um2, was also measured by

counting the individual chondrocytes in each zone and dividing the number by the total area of

the zone. Neither Aqp9 -/- proliferating or hypertrophic zones were significantly denser than their

WT counterparts (Figure 4.5G).

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Figure 4.5. Histological analysis of P5 WT and Aqp9 -/- epiphyseal plates

H&E staining of P5 WT and Aqp9 -/- distal femurs (A, B) with their respective image

enlargements (C, D). Dotted black lines demarcate the observable zone boundaries. Yellow and

red lines indicate the observable proliferating and hypertrophic zones respectively (RZ = resting

zone, PZ = proliferating zone, PH = pre-hypertrophic zone, HZ = hypertrophic zone). n=3.

200um 200um

Aqp9 -/- WT

100um 100um

HZ HZ

PZ

PZ

Aqp9 -/- WT

A B

C D

RZ

RZ RZ

PH PH

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Figure 4.5. cont.

Quantification of the proliferating and hypertrophic zone heights (E) and average cells/column

(F) of the WT and Aqp9 -/- distal femurs (PZ = proliferating zone, HZ = hypertrophic zone).

n=3. Student’s two-tailed t test was performed for statistical analysis, with the level of

significance set at *P < 0.05.

0

50

100

150

200

250

300

350

400

450

500

PZ HZ Total

Heig

ht

(um

)

Epiphyseal plate zone

WT

Aqp9 -/-

*

N.S

N.S

0

5

10

15

20

25

30

PZ HZ

Avera

ge c

ells

/colu

mn

Epiphyseal plate zone

WT

Aqp9 -/-

*

N.S

E

F

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Figure 4.5. cont.

Quantification of the cellular density of the proliferating and hypertrophic zones (G) of the WT

and Aqp9 -/- distal femurs (PZ = proliferating zone, HZ = hypertrophic zone). n=3. Student’s

two-tailed t test was performed for statistical analysis, with the level of significance set at *P <

0.05.

0

1

2

3

4

PZ HZ

Cells

/um

2(1

0-3

)

Epiphyseal plate zone

WT

Aqp9 -/-

N.S

N.S

G

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4.6 Immunohistochemistry of P21 WT and Aqp9 -/- epiphyseal plates

P21 WT and Aqp9 -/- littermate proximal tibia epiphyseal plates were sectioned and probed with

a primary antibody against Col10a1 to qualitatively visualize their zone arrangements and

chondrocyte distributions, with a focus on the hypertrophic zone. The tibia was selected rather

than the femur due to the availability of sections. As mentioned previously, all mouse models

described with long bone phenotypes—including those with phenotypes in specific bones only—

have spatial irregularities in those epiphyseal plate zones. Therefore, investigating the femur

epiphyseal plate was determined to be repetitious. As the long bone phenotypes observed at both

P5 and P21 were isolated to the hindlimb only, the hindlimb remained of interest. The adjoining

epiphyseal plate at the proximal tibia was selected for histological analysis.

An overview of the epiphyseal plates do not show any apparent differences in zonal height

between WT and Aqp9 -/- mice (Figure 4.6A, 4.6B). The image enlargements clearly indicate the

height of the entire epiphyseal plate, as well as their zonal compartments (Figure 4.6C, 4.6D). In

the upper portions, the resting-proliferating zones were measured due to difficulty in

distinguishing between the chondrocyte types. The resting zone regions, where chondrocytes are

more randomly dispersed, are narrow in both WT and Aqp9 -/- mice. The proliferating zone

regions clearly end where the dark staining for Col10a1 begins, indicating the upper portion of

the hypertrophic zone. The hypertrophic zone is dense with chondrocytes outlined in the dark

stain, where Col10a1 protein is robustly expressed.

Resting-proliferating and hypertrophic zone heights were measured by drawing five vertical lines

across each zone per biological replicate and averaging their heights. Hypertrophic zone heights

were divided by resting-proliferative zone heights to measure the hypertrophic zone – resting-

proliferative zone ratio. Statistical analysis of the ratios show no significant difference between

the P21 WT and Aqp9 -/- mice (Figure 4.6E). Total epiphyseal plate heights were also measured

and show no significant difference (Figure 4.6F).

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Figure 4.6. Immunohistochemistry of P21 WT and Aqp9 -/- epiphyseal plates

Col10a1 staining of P21 WT and P21 proximal tibias (A and B) with their respective image

enlargements (C and D). Blue bar sections indicate the observable epiphyseal plate, green

sections indicate the observable resting and proliferating zones combined, and red sections

indicate the observable hypertrophic zones (C and D) (R-PZ = resting-proliferative zone, H =

hypertrophic zone).

400um 400um

400um 400um

R-PZ

HZ

R-PZ

HZ

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Figure 4.6. cont.

Quantification of WT and Aqp9 -/- hypertrophic zones as a ratio to their respective resting-

proliferating zones (E). Measurement of the total epiphyseal plate heights of WT and Aqp9 -/-

mice (F). n=2. Student’s 2-tailed t test was performed for statistical analysis, with the level of

significance set at *P < 0.05.

0

0.1

0.2

0.3

0.4

0.5

0.6

0.7

0.8

0.9

1

WT Aqp9 -/-

Pro

xim

al tib

ia H

Z /

R-P

Z r

atio

Mouse genotype

N.S

E

0

200

400

600

800

1000

WT Aqp9 -/-

Pro

xm

inal tib

ia e

pip

hyseal pla

te h

eig

ht (u

m)

Mouse genotype

N.S F

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4.7 Analysis of old WT and Aqp9 -/- epiphyseal plates

18 month old male WT and Aqp9 -/- femoral heads were stained with Toluidine blue to highlight

the cartilaginous epiphyseal plates. This would help determine if Aqp9 affects epiphyseal plate

narrowing into an old age timepoint. An overview shows the epiphyseal plates stained a deep

blue as a thin line traversing across the diameter of the femoral head (Figure 4.7A, 4.7B). Image

enlargement shows that in the WT head, the epiphyseal plate reaches the right side toward the

greater trochanter and makes contact with the cortical bone (Figure 4.7C). However, in the Aqp9

-/- head, the epiphyseal plate does not reach the cortical bone and is instead ablated (Figure

4.7D). The observation was initially thought to be due to sectioning inconsistencies that caught

the Aqp9 -/- epiphyseal plates at a particular depth, but statistical analysis shows the same trend

across all Aqp9 -/- biological replicates and significantly reduced width compared to the WT

replicates (Figure 4.7E).

The femoral heads were also stained with H&E to highlight the bone marrow, presence of

hematopoietic cells, and the overall trabecular bone. The epiphyseal plate is visible as a line

running in between the bone marrow and trabecular bone. In the WT femoral head, the bone

marrow is white in colour (Figure 4.7F). In the Aqp9 -/- femoral head, the bone marrow is not

white but rather stained with the H&E stain (Figure 4.7G). Furthermore, the presence of

hematopoietic cells were more visible in the Aqp9 -/- bone marrow than in WT bone marrow.

The epiphyseal plate in the Aqp9 -/- femoral head does not appear to fully contact the cortical

bone. The region of trabecular bone in the Aqp9 -/- femoral head also appears smaller than the

one in the WT femoral head.

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Figure 4.7. Analysis of adult WT and Aqp9 -/- epiphyseal plates

Toluidine blue staining of 18 month old WT and Aqp9 -/- femoral heads (A and B) with their

respective image enlargements (C and D). Red-dotted lines (C and D) indicate how far the

epiphyseal line traverses the entire femoral head diameter. Yellow-dotted line (D) indicates the

area where the epiphyseal plate ceases to exist. EP = epiphyseal plate, CB = cortical bone.

CB

CB

EP EP

500um 500um

250um 250um

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Figure 4.7. cont.

Quantification of each epiphyseal plate length of the WT and Aqp9 -/- mice as a percentage of

the entire femoral head diameter (E). n=3. Student’s two-tailed t test was performed for statistical

analysis, with the level of significance set at *P < 0.05.

Figure 4.7. cont.

H&E staining of 18 month old WT and Aqp9 -/- mouse femoral heads (F & G). Black arrows

indicate the region of observable bone marrow and its respective colour. Yellow arrows indicate

locations where observable hematopoietic cells reside. CB = cortical bone, EP = epiphyseal

plate, BM = bone marrow, TB = trabecular bone.

Aqp9 -/- G WT F

0.00

20.00

40.00

60.00

80.00

100.00

WT Aqp9 -/-

Epip

hys

eal

line length

/ fem

ora

l head d

iam

ete

r (%

)

Mouse genotype

E *

500um 500um

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4.8 Histological analysis of embryonic WT and Aqp9 -/- epiphyseal

plates

E16.5 WT and Aqp9 -/- littermate proximal tibia epiphyseal plates were sectioned and stained

with Safranin-O to visualize their zone arrangements and chondrocyte distributions. This would

help determine if Aqp9 affects endochondral ossification during development. An overview of

the epiphyseal plates show similar zonal heights and total height between WT and Aqp9 -/- mice

(Figure 4.8A, 4.8B). Image enlargement shows that the Aqp9 -/- resting zone appears to cave in

towards the top of the epiphyseal plate, whereas the WT resting zone forms a straight boundary

with the proliferating zone perpendicular to the long bone (Figure 4.8C, 4.8D). The Aqp9 -/-

proliferating zone chondrocytes appear to retain columnar structures further up the epiphyseal

plate than their WT counterparts.

Resting, proliferating, and hypertrophic zone heights were measured by drawing five vertical

lines across each zone per biological replicate and averaging their heights. The hypertrophic zone

included the pre-hypertrophic zone to aid measurement boundaries. The heights were summed

and averaged to determine the total epiphyseal plate height. Then, the ratio of each zone

compared to the total height was determined by dividing each zone height by the total height.

Statistical analysis of the ratios show that the E16.5 Aqp9 -/- resting zones are significantly

shorter than those of their WT counterparts (Figure 4.8E). No significant differences were

observed in the proliferating and hypertrophic zones (Figure 4.8F, 4.8G). The sum of the

proliferating and hypertrophic zone heights divided by the total plate height are also shown, to

demonstrate that the non-resting portions of Aqp9 -/- epiphyseal plates are taller than those of

WT mice (Figure 4.8H).

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Figure 4.8. Histological analysis of embryonic WT and Aqp9 -/- epiphyseal plates

Safranin-O staining of E16.5 WT and Aqp9 -/- proximal tibias (A and B) with their respective

image enlargements (C and D). Dotted-line regions indicate the observable resting zone of the

epiphyseal plate (RZ = resting zone, PZ = proliferating zone, HZ = hypertrophic zone).

100um 100um WT Aqp9 -/-

RZ

RZ

RZ

PZ

RZ

PZ

HZ HZ

PZ

PZ

100um 100umWT Aqp9 -/-

A B

C D

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Figure 4.8. cont.

Quantification of each epiphyseal plate zone height (E, F, G) of the WT and Aqp9 -/- embryos as

a ratio of the entire epiphyseal plate height (EP = epiphyseal plate). Ratio of the proliferating

zone and hypertrophic zone combined to the entire epiphyseal plate height (H). n=3 (2 WT

biological replicates and 1 technical replicate, 3 Aqp9 -/- biological replicates). Student’s two-

tailed t test was performed for statistical analysis, with the level of significance set at *P < 0.05.

0

0.1

0.2

0.3

0.4

0.5

WT Aqp9 -/-

RZ

he

igh

t (u

m)

/ E

P h

eig

ht (u

m)

Mouse genotype

*

0

0.1

0.2

0.3

0.4

0.5

WT Aqp9 -/-

PZ

he

igh

t (u

m)

/ E

P h

eig

ht (u

m)

Mouse genotype

N.S

0

0.1

0.2

0.3

0.4

0.5

WT Aqp9 -/-

HZ

he

igh

t (u

m)

/ E

P h

eig

ht (u

m)

Mouse genotype

N.S

0.5

0.6

0.7

0.8

WT Aqp9 -/-

PZ

+ H

Z h

eig

ht (u

m)

/ E

P h

eig

ht (u

m)

Mouse genotype

*

E F

G H

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4.9 Cell proliferation analysis of P5 WT, Aqp9 +/-, and Aqp9 -/-

epiphyseal plate chondrocytes

P5 WT, Aqp9 +/-, and Aqp9 -/- primary epiphyseal plate chondrocytes were subjected to a cell

proliferation experiment to determine if deletion of Aqp9 resulted in any proliferation defect.

Any proliferation difference observed would help support the epiphyseal plate zone

dysregulation observed. Epiphyseal plate chondrocytes from P5 WT, Aqp9 +/-, and Aqp9 -/-

mice were excised and digested in a pronase and collagenase protocol, then seeded at 1 x 105

primary chondrocytes per well in a 6-well plate. Chondrocyte numbers per well were counted

every 24 hours over a 96 hour period (Figure 4.9).

WT, Aqp9 +/-, and Aqp9 -/- chondrocytes reach confluency by the 96 hour timepoint. A lag in

growth is observed in Aqp9 +/- and Aqp9 -/- chondrocytes at the 48 hour timepoint, followed by

a jump in the cell number at the 72 hour timepoint. Overall, Aqp9 +/- and Aqp9 -/- chondrocytes

appear to recover from an abnormally low cell number to match the WT cell number at the 96

hour timepoint.

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Figure 4.9. Cell proliferation analysis of P5 WT, Aqp9 +/-, and Aqp9 -/- epiphyseal plate

chondrocytes

Cell count of WT (black), Aqp9 +/- (orange), and Aqp9 -/- (red) epiphyseal plate chondrocytes

seeded at 100,000 cells from 0-96 hours. n=3. Student’s 2-tailed t test was performed for

statistical analysis comparing Aqp9 +/- and Aqp9 -/- to WT at each timepoint, with the level of

significance set at *P < 0.05, **P < 0.01, ***P < 0.001.

0

2

4

6

8

10

12

0 24 48 72 96

Cell

num

ber

(1e

5)

Time (hours)

WT Aqp9 +/- Aqp9 -/-

N.S

N.S

***

***

N.S

N.S

N.S

N.S

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4.10 Gene expression analysis of P5 WT, Aqp9 +/-, and Aqp9 -/-

epiphyseal plate chondrocytes

P5 WT, Aqp9 +/-, and Aqp9 -/- primary epiphyseal plate chondrocytes were subjected to gene

expression analysis to observe if their individual gene profiles would reflect the P5 tibia bone

phenotype and femur epiphyseal plates. The experiment would also help explain the irregular

proliferation pattern observed with the cell proliferation experiment. Epiphyseal plate

chondrocytes from P5 WT, Aqp9 +/-, and Aqp9 -/- mice were excised and digested. RNA was

extracted and then reverse transcribed to cDNA for qPCR gene expression analysis. Five gene

probes were used: Col10a1, Mmp13, Runx2, Sox9, and Aqp9. Col10a1, Mmp13, and Runx2 are

known aforementioned markers of chondrocyte hypertrophy. Sox9 is a known aforementioned

marker of early chondrogenesis, proliferation, and hypertrophy delay. Aqp9 was used to observe

if its expression levels would parallel the expression of the other probes in a remarkable manner

or trend.

Charting of the gene probe fold changes presented with significant differences in Mmp13, Sox9,

and Aqp9 (Figure 4.10). For the Mmp13 probe, Aqp9 +/- chondrocytes presented with a

significant fold change less than 1. Here, Aqp9 -/- chondrocytes did not present with a significant

change. For the Sox9 probe, Aqp9 -/- chondrocytes presented with a significant fold change

greater than 1. Here, Aqp9 +/- chondrocytes did not present with a significant change. For the

Aqp9 probe, Aqp9 -/- chondrocytes presented with a significant decrease while Aqp9 +/-

chondrocytes did not. Significant fold changes were not observed in either Aqp9 +/- or Aqp9 -/-

chondrocytes for the Col10a1 and Runx2 probes.

Overall, the fold change levels of hypertrophic markers in the Aqp9 -/- chondrocytes were not

significantly different relative to the WT control. The fold change of the proliferation marker

Sox9 was increased. Aqp9 expression was significantly decreased. In Aqp9 +/- chondrocytes, the

fold change level of the hypertrophic marker Mmp13 was significantly decreased relative to the

WT control.

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Figure 4.10. Gene expression analysis of P5 WT, Aqp9 +/-, and Aqp9 -/- epiphyseal plate

chondrocytes

qPCR of WT (white), Aqp9 +/- (blue) and Aqp9 -/- (orange) epiphyseal plate chondrocytes with

gene probes for markers of proliferation and hypertrophy in chondrocyte differentiation. n=3.

Student’s 2-tailed t test was performed for statistical analysis comparing Aqp9 +/- and Aqp9 -/- to

WT for each probe, with the level of significance set at *P < 0.05, **P < 0.01, ***P < 0.001.

0

1

2

3

4

5

Col10a1 Mmp13 Runx2 Sox9 Aqp9

Fo

ld c

ha

ng

e

qPCR gene

WT

Aqp9 +/-

Aqp9 -/-

N.S

N.S N.S

**

N.S

N.S

**

N.S

***

N.S

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4.11 Silencing of Aqp9 in P5 WT epiphyseal plate chondrocytes

P5 WT primary epiphyseal plate chondrocytes were subjected to an Aqp9-siRNA silencing

protocol to observe if the Aqp9 +/- or Aqp9 -/- gene profile could be simulated. The experiment

would also help determine if the Aqp9 +/- or Aqp9 -/- gene profile was cell autonomous to the

chondrocytes. Epiphyseal plate chondrocytes were excised from P5 WT mice, digested, and

plated for transfection with the Aqp9-siRNA. qPCR using the five aforementioned probes

Col10a1, Mmp13, Runx2, Sox9, and Aqp9 was performed after 24 hours of incubation time.

Charting of the gene probe fold changes did not present with any significant differences (Figure

4.11).

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Figure 4.11. Silencing of Aqp9 in P5 WT epiphyseal plate chondrocytes

qPCR of WT epiphyseal plate chondrocytes with an Aqp9-siRNA (yellow) and with a control

siRNA (white), with gene probes for markers of proliferation and hypertrophy in chondrocyte

differentiation. n=3. Student’s 2-tailed t test was performed for statistical analysis comparing

WT-siRNA to WT-control, with the level of significance set at *P < 0.05.

0

0.5

1

1.5

2

2.5

3

Col10a1 Mmp13 Runx2 Sox9 Aqp9

Fo

ld c

hange

qPCR gene

WT-control

WT-siRNA

N.S N.S

N.S

N.S

N.S

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99

5 Discussion

The process of long bone growth is dependent on endochondral ossification, where chondrocytes

in the epiphyseal plates proliferate, undergo hypertrophy, and eventually ossify (Mackie,

Tatarczuch, & Mirams, 2011). The biology underscoring this process is complex and the clinical

management of LLDs relies on continuous endeavours in deciphering its unknown factors

(Killion, Mitchell, Duke, & Serra, 2017). Hence, identifying any novel regulators of

endochondral ossification is valuable for non-invasive therapies that can influence long bone

growth. The chondrocyte channelome is a popular area of focus that investigates the ion channels

and porins on the chondrocyte membrane that affect cartilage activity and pathogenesis

(Mobasheri et al., 2018). In particular, Aqp9 is an aquaporin isoform that indiscriminately

conducts solutes through a larger-than-usual pore (Viadiu et al., 2007). Interestingly, Aqp9 is one

of the few aquaporin species that is capable of transporting H2O2, a known inducer of

chondrocyte hypertrophy (Watanabe et al., 2016; Morita et al., 2007). Kannu et al. (2015)

initially identified that in human articular cartilage samples, those cultured with the WNT

pathway antagonist DKK1 had a greater than 2-fold change in expression of AQP9. As Dkk1

transcripts regulate embryogenesis and are restricted to the murine forelimb and hindlimb buds at

E10.5, Aqp9 may also play a role in guiding limb development (Grotewold, Theil, & Rüther,

1999; Lieven, Knobloch, & Rüther, 2010). However, the study of Aqp9 in chondrocytes and

bone has been limited to articular cartilage, osteoclasts, and bone density (Nagahara et al., 2010;

Liu et al., 2009; Bu et al., 2012). To study Aqp9 in endochondral ossification, the use of the

Aqp9 -/- mutant model developed by Rojek et al. (2007) allowed for a specific focus on its

function in the epiphyseal plate.

In this study, the Aqp9 -/- mutation was shown to be involved in differential long bone length,

epiphyseal plate zone dysregulation, and chondrocyte gene expression. Aqp9 is expressed in the

murine epiphyseal plate at the critical proliferating and pre-hypertrophic zones. The Aqp9 -/-

mice have longer tibia bones at the P5 age and shorter femur bones at the P21 age, suggesting

that Aqp9 may be important in hindlimb development. Analysis of the P5 Aqp9 -/- femur

epiphyseal plates show irregular expansion of the proliferating zone, suggesting that even long

bones not significantly different may have dysregulated endochondral ossification. Analysis of

the P21 Aqp9 -/- tibia epiphyseal plates do not show any significant differences in epiphyseal

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zone height or hypertrophy marker staining. At the old age stage, Aqp9 -/- femoral heads show

unnatural remission and narrowing of the epiphyseal plate, suggesting that the mutants may

experience faster partial epiphyseal closure. In development, E16.5 Aqp9 -/- tibial heads show

diminished epiphyseal plate resting zone lengths, suggesting that their chondrocytes may attain a

proliferative and differentiated state faster than WT counterparts. Both Aqp9 +/- and Aqp9 -/-

chondrocytes have different proliferation rates than WT chondrocytes. Aqp9 -/- chondrocytes

also presented significantly increased expression of the proliferation marker Sox9. RNA

silencing of Aqp9 in WT chondrocytes did not present with any significant differences in

expression of the gene probes used. In this study, I hypothesized that Aqp9 is a regulator of

epiphyseal plate chondrocyte proliferation, hypertrophy, and long bone growth. The data provide

characterization of the Aqp9 -/- mutation at the anatomical, histological, cellular, and gene

expression levels. In future studies, analysis of Aqp9 -/- chondrocytes through transcriptome

sequencing may provide a richer understanding of aquaporins in endochondral ossification.

5.1 Aqp9 temporally influences hindlimb length

5.1.1 Aqp9 -/- mutants do not differ in appearance and weight

To determine if WT and Aqp9 -/- mice were comparable in terms of physical appearance and

body weight, mice at P5, P21, and 18 months of age were culled for imaging and body weight

measurements. These timepoints served to examine gross phenotypes before pubertal growth,

during pubertal growth, and during old age respectively (Mitchell et al., 2013; Jackson et al.,

2017). WT and Aqp9 -/- mice at each timepoint were comparable in terms of overall appearance

and weight, as determined by photography and weighing with a precision scale. As mentioned

previously, male mice were used at P21 and 18 months to prevent any sex-specific body weight

differences. P5 mice were not sexed due to difficulty in determining anogenital differences.

Rojek et al. (2007) reported that no detectable differences in physical appearance or body weight

were observed between age-matched WT and Aqp9 -/- littermate mice. This was confirmed

across the murine lifespan at the pup, juvenile, and old age stages. The average body weights

charted over time appear to match lifelong body weight measurements of WT male mice (List,

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Berryman, Wright-Piekarski, Jara, & Kopchick, 2013). Rojek et al. (2007) also reported

increased plasma glycerol in Aqp9 -/- mice after starvation, suggesting that Aqp9 may play a role

in repressing gluconeogenesis without significantly affecting weight. It is also possible that

deletion of a functional aquaporin isoform is compensated by the activity of other isoforms, as

shown in human pancreatic duct cell function and even plant water regulation (Burghardt et al.,

2003; Cohen et al., 2013). Hence, aquaporin redundancy may rescue any superficially observable

defect that Aqp9 deletion would have caused. Specifically, Aqp9 -/- mice may be expected to

have defected H2O2 transport, but AQP3 and AQP8 are also H2O2 transporters (Watanabe et al.,

2016). The role of these aquaporins have not been explored in epiphyseal plate chondrocytes or

bone and their contributions are unknown. Nevertheless, deletion of a channel capable of

transporting a known hypertrophy inducer may relay an effect on endochondral ossification.

In light of the literature and previous data from the Kannu lab, Aqp9 may affect long bone

growth. These differences may not be observable without skeletal dissection and analysis of the

long bones and their histology.

5.1.2 Aqp9 is expressed in the P14 mouse epiphyseal plate

Prior to long bone analysis, Aqp9 expression in the murine epiphyseal plate was checked to

confirm a possible spatiotemporal role in endochondral ossification. P14 WT mice were selected

as endochondral ossification is prominent at this timepoint (Williams, 2014). Furthermore, the

discrete zones of the murine epiphyseal plate are best visualized by in situ hybridization at P14

due to their visibility at this timepoint (Belluoccio, Bernardo, Rowley, & Bateman, 2008). In situ

hybridization of the proximal tibia epiphyseal plate with an Aqp9 riboprobe showed robust

expression of the Aqp9 transcript in the proliferating and pre-hypertrophic zone chondrocytes.

The presence of Aqp9 in the maturing epiphyseal plate suggests that it may be involved in

endochondral ossification. The use of in situ hybridization to confirm the expression of Col2a1,

Sox9, Mmp13, Col10a1, and other currently well-known chondrocytic markers is well reported

(Hall et al., 2013; Hattori et al., 2010). However, the demonstration of aquaporin expression in

the epiphyseal plate is limited with the exception of Aqp1 in the rat hypertrophic zone

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(Claramunt et al., 2017). Here, staining of Aqp9 to the proliferating and pre-hypertrophic zones

suggests that Aqp9 regulates chondrocyte activity prior to hypertrophy. The absence of Aqp9

expression in the hypertrophic zone supports that Aqp9 may function to maintain the

proliferative state and prepare chondrocytes for hypertrophy. Then, chondrocytes that attain

hypertrophy cease expression of Aqp9 and may rely on other markers to maintain hypertrophy

and prepare for ossification.

In the epiphyseal plate, Aqp9 appears to mimic the expression gradient of Col2a1 and Sox9, both

of which are known markers of the proliferating and pre-hypertrophic zones (Gómez-Picos &

Eames, 2015). However, specific Aqp9 expression in these zones does not necessarily mean

Aqp9 functions to maintain those states. The murine epiphyseal plate is a host to extremely

diverse factors that can promote certain chondrocytic phenotypes without being expressed where

those chondrocytes would be. Ihh is expressed at the pre-hypertrophic junction but serves to

maintain the proliferative state through PTHrP (Kronenberg, 2003). Wnt4, a Wnt family member

that signals through β-catenin, is also expressed in the pre-hypertrophic zone but instead

accelerates hypertrophy (Später et al., 2006; Hartmann & Tabin, 2000; Lee & Behringer, 2007).

Rspo2, an activator of Wnt/ β-catenin signalling, is expressed in the cartilage primordium and

embryonic long bone at the proliferating and pre-hypertrophic zones; yet it suppresses Col2a1

and Sox9 to promote hypertrophy (Nam, Turcotte, & Yoon, 2007; Takegami et al., 2016). It is

possible that Aqp9 imports H2O2 in proliferating chondrocytes to induce hypertrophy and then

ceases in expression, fulfilling its moonlighting role as a channelome member. However, Aqp9 is

a bidirectional transporter and may instead export H2O2 to delay hypertrophic differentiation.

Regardless, Aqp9 may function under the spatiotemporal guidance of unexplored transcription

factors within the epiphyseal plate.

Overall, Aqp9 expression in the epiphyseal plate suggests that Aqp9 may be important in

endochondral ossification and long bone growth. In situ hybridization at the proximal tibia

suggests that Aqp9 regulates hindlimb growth, although it is likely that Aqp9 is expressed in

other appendicular epiphyseal plates as well.

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5.1.3 P5 Aqp9 -/- mice have longer tibia bones

To determine if Aqp9 -/- mice have differential long bones at the pup stage, P5 WT and Aqp9 -/-

littermates were dissected for whole-mount skeletal staining. There were no apparent gross body

differences between the two genotypes. Long bone measurements revealed that Aqp9 -/- mice

had significantly longer tibia bones than their WT counterparts. All humerus and femur bone

measurements did not present with significant differences. Excised spleens did not appear to

differ in weight, nor did the condylo-basal lengths of their skulls.

A long bone phenotype is observed in Fgfr3c -/- mice, where deletion of the Ffgf3 isoform

results in dramatic skeletal overgrowth of all long bones (Eswarakumar et al., 2007). Fgfr3 is a

known negative regulator of bone growth, as Aqp9 may also be as both their knockouts result in

bone overgrowth (Deng, Wynshaw-Boris, Zhou, Kuo, & Leder, 1996). Other knockout

mutations are reported to result in skeletal overgrowth. Deletion of a natriuretic peptide gene

through Npr3 -/- mice result in skeletal overgrowth in 2 month old mutants (Matsuwaka et al.,

1999). Conditional deletion of the cell proliferation activator Yap1 through Yap1c/c; Col2a1-Cre

mutants result in skeletal overgrowth at E16.5 and E18.5 (Deng et al., 2016). However, the

observations suggest that Aqp9 deletion is tibia-specific at P5 in bone length modulation. There

are also certain knockout mutations that are bone-specific in their phenotype. In skeletal

development, the highly regulated ECM contains proteoglycans of which the chondroitin sulfate

proteoglycans are a large proportion (Wilson et al., 2012). In mice lacking chondroitin sulfate

synthase-2, femur and tibia bone lengths are significantly reduced whereas humerus and ulnar

lengths are unchanged (Ogawa et al., 2012). Nevertheless, tibial-specific overgrowth defects are

mostly reported in physiological compensatory responses instead of mutations, such as in human

fractures and canine femoral shortening (Taylor, 1963; Schaefer, Johnson, & O’Brien, 1995). At

development, Aqp9 may normally signal with hindlimb-specific genes such as Tbx4 albeit in a

mesomelic fashion at the tibia (Rodriguez-Esteban et al., 1999; Isidor et al., 2010). Interestingly,

gene expression profiling of muscle invasive bladder cancer samples identified AQP9 and TBX4

as upregulated genes together in connective tissue disorders (Hussain et al., 2017). Hence, Aqp9

and Tbx4 may interact in the developing hindlimb. In mesomelic syndromes such as Langer

mesomelic dysplasia, shortening of the distal limbs involves inactivation of the short-stature

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gene Shox2, Runx2, and Ihh (Cobb, Dierich, Huss-Garcia, & Duboule, 2006). Interestingly, use

of the ISMARA (Integrated System for Motif Activity Response Analysis) public dataset

‘Illumina Body Map 2’ shows that the AQP9 promoter is a top ten target for SHOX (Balwierz et

al., 2014). It is possible that the Shox transcription factor regulates endochondral ossification

partially through Aqp9. Deletion of Aqp9 may therefore repress a natural repressor of tibial

growth and resolve in abnormally lengthened tibia bones at P5. It is also possible that Aqp9 is

expressed differently throughout all long bone epiphyses and is under unexplored transcriptional

control. Conversely, the use of more biological replicates may reveal that the tibial overgrowth is

actually total long bone overgrowth. Overall, Aqp9 deletion does not severely affect skeletal

stature at the pup stage and may be dispensable or redundant in effect. However, the lack of a

difference in spleen and skull measurements between WT and Aqp9 -/- pups suggest that the

mutation targets endochondral ossification—and does not affect intramembranous ossification or

general organ development.

The early tibial overgrowth in P5 Aqp9 -/- mice appears reminiscent of precocious puberty.

Human precocious puberty is characterized by the early development of sexual characteristics

and is often idiopathic (Bourayou, Giabicani, Pouillot, Brailly-Tabard, & Brauner, 2015).

However, the cause of precocious puberty has been linked to deficiencies in MKRN3, a zinc

finger motif gene that normally helps inhibit activation of the hypothalamic-pituitary-gonadal

axis (Shin, 2016). Defects in MKRN3 lead to accelerated growth, early bone maturation, early

height gain, but ultimately reduced stature (Carel, Lahlou, Roger, & Chaussain, 2004). At P5,

Aqp9 deletion appears to mimic the early growth though tibial elongation. Interestingly, absence

of MKRN3 in Prader-Willi syndrome—a genetic disorder that includes short stature—is

accompanied by a 1.52 fold change decrease of AQP1 expression and 2100.84 fold change

decrease in AQP3 expression in tissue mitochondria (Yazdi et al., 2013). Since AQP1 and AQP3

are also aquaglyceroporins and can transport H2O2 like AQP9, it is possible that AQP9 plays a

role here to influence skeletal stature but was not detected (Plourde et al., 2015; Laforenza,

Bottino, & Gastaldi, 2016; Almasalmeh, Krenc, Wu, & Beitz, 2014). If Aqp9 deletion is involved

in precocious puberty, a shorter skeletal stature relative to WT littermates closer to adulthood

would support its role.

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The role of estrogen in Aqp9 regulation should also be considered. Estrogen receptors are

expressed in newborn mice, where basal levels of estrogen bind and gradually stimulate long

bone growth through growth hormone activation (Zuloaga, Zuloaga, Hinds, Carbone, & Handa,

2014; Cutler, 1997; Avtanski et al., 2014). During postnatal development, estrogen promotes

chondrocyte proliferation and type II collagen expression in the epiphyseal plate (Shi, Zheng, Li,

& Liu, 2017). Aqp9 is upregulated by estrogen in rat epididymal ductules but downregulated in

rat hepatocytes (Oliveira, Carnes, França, Hermo, & Hess, 2005; Lebeck et al., 2012). The role

of estrogen in chondrocyte Aqp9 expression has not been explored. Normally, estrogen binds

alpha and beta estrogen receptors expressed in epiphyseal plate chondrocytes to promote

proliferation (Li, Wang, Jiang, & Dai, 2012). Epiphyseal plate chondrocytes can endogenously

produce 17β-estradiol to stimulate proliferation, protect against apoptosis, and promote

longitudinal growth (Chagin, Chrysis, Takigawa, Ritzen, & Sävendahl, 2006). In Aqp9 -/- mice,

Aqp9 is not available as a target and may free available estrogen to bind growth-promoting

receptors, such as growth hormone receptors (Slootweg, Swolin, Netelenbos, Isaksson, &

Ohlsson, 1997). It is also possible that if Aqp9 is a negative regulator of bone growth, estrogen

regularly binds to its enhancer to prevent rampant bone growth. Without Aqp9 as a limiter, the

P5 long bone phenotype may occur. This is similar to what is observed with insulin, which

promotes chondrocyte proliferation and long bone growth (Zhang et al., 2014). Kuryiama et al.

(2002) have shown that Aqp9 is downregulated by insulin addition via the negative insulin

response element. If Aqp9 limits bone growth, insulin may bind to the element and instead

promote bone growth. Estrogen and insulin may work together with Aqp9 as a downstream

target, as combined estradiol and growth hormone treatment has been shown to elevate IGF

levels in primates (Wilson, 1998).

Overall, Aqp9 may be a negative regulator of bone growth in early murine endochondral

ossification. It is a possible intermediate in hormonal signalling that subtly impacts tibial growth,

and its deletion in the Aqp9 -/- mutation may involve an estrogenic spurt that induces a

precocious overgrowth phenotype. This hypothesis would be supported by hastened epiphyseal

closure and shortened long bone lengths closer to the adult stage (Nilsson et al., 2014).

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5.1.4 P21 Aqp9 -/- mice have shorter femur bones

To determine if long bone abnormalities persisted between WT and Aqp9 -/- littermates at the

juvenile stage, P21 male mice were dissected for whole-mount skeletal staining. There were no

observable gross body differences between the two genotypes. Measurement of the long bones

revealed that Aqp9 -/- mice had significantly shorter femur bones than their WT counterparts. All

humerus and tibia bone measurements did not present with significant differences. Similarly to

the P5 mice, excised spleens did not appear to differ in weight and condylo-basal skull lengths

did not differ either. This reiterates that Aqp9 deletion targets endochondral ossification and may

be independent of other growth processes.

A short bone phenotype observed in knockout mouse models is common. Sox9 +/- mice die

perinatally with premature mineralization and shorter, distorted bones (Bi et al., 2001). Runx2 -/-

mice also die shortly after birth without proper mineralization and subsequently shorter, nearly

nonexistent limbs (Otto et al., 1997). Ihh -/- mice that survive till birth display severe dwarfism

of the limbs (St-Jacques et al., 1999). Although these genes play different proliferative-

hypertrophic roles in endochondral ossification, it is evident that they are all indispensable to

long bone growth: their deletion, regardless of which chondrocytic phenotype they promote,

severely diminishes the final bone length. However, certain gene mutations can induce shortened

limbs without lethality. In Hp1bp3 -/- mice that lack the binding protein and IGF-1 modulator

Hp1bp3, mutants display reduced femoral length and overall dwarfism (Garfinkel et al., 2015).

Cobb et al. (2006) previously explored Shox2C/- mice with conditional Shox2 deletion via the

limb-specific Prx1-Cre transgene. The mutants present with virtually nonexistent humerus

bones, severely shortened femurs, and shorter tibias with bowing. At P21, Aqp9 deletion also

appears to shorten long bones without inducing lethality. However, the observations suggest that

the mutation is femur-specific at P21. There are few reported mouse mutants to model this

phenotype. In Mmp13 -/- mutants, where Mmp13 is a critical enzyme for chondrocyte

hypertrophy, a significant ~8% reduction in long bone length occurs only at the juvenile

timepoint and only in femur bones (Inada et al., 2004). Murine deletion of Spred2, an

FGFR3/MAPK intermediate, also results in bone-specific shortening in the hindlimb but at the

tibia instead (Bundschu et al., 2005). Femoral length defects are mostly reported in human

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conditions such as Down’s syndrome and skeletal dysplasia (Morales-Roselló & Llorens, 2012).

In early puberty, Aqp9 may continue to normally signal with Tbx4 to affect hindlimb growth.

Interestingly, the short bone phenotype here appears to be rhizomelic (Panda et al., 2014). In

rhizomelic disorders such as rhizomelic chondrodysplasia punctata, shortening of the proximal

limbs involves mutation of FGFR1 (White et al., 2005). Interestingly, Col2a1-Cre-driven

deletion of Shox2 also results in rhizomelia due to precocious chondrocyte maturation and

hypertrophy (Bobick & Cobb, 2012). As mentioned previously, AQP9 is a target of SHOX

regulation and the two may function in concert at P21 to drive normal bone growth. Here,

deletion of Aqp9 appears to reverse the long bone phenotype seen at the P5 timepoint. Aqp9

expression may naturally vary throughout the hindlimb epiphyseal plates temporally. Repeating

the skeletal staining with more biological replicates may reveal that the femoral shortening

actually affects the entire hindlimb significantly, or possibly all limbs. Overall, the Aqp9 -/-

mutation does not drastically affect skeletal stature at the juvenile stage.

In comparison to the P5 bone phenotype, a striking observation is the reduced femur bone length

at P21. In skeletal overgrowth models such as Fgfr3 -/-, the long bone defect persists into early

adulthood without any apparent change in growth rate (Xie et al., 2017). Here, an early, specific

long bone phenotype has transformed into a juvenile, specific short bone phenotype within the

hindlimb. This observation is similar to precocious puberty, where mice can exhibit its

characteristics as early as 7 days of age (McGee & Narayan, 2013). As mentioned previously,

Aqp9 is also a target of estrogen and its deletion in the Aqp9 -/- mutation at P5 may promote

estrogenic binding to growth receptors. By P21, excess estrogen may lead to earlier narrowing of

the epiphyseal plate, slower growth, and shorter femurs (Weise et al., 2001). Deletion of Aqp9

appears to encourage growth through accelerated endochondral ossification but later discourages

growth through a mechanism involving dysregulated hormonal and sexual development. Aqp9

may function alongside transcription factors that affect secondary sexual characteristics at P21,

where a significant portion of sexual differentiation has occurred (Schlomer et al., 2013). In

comparison to male mice, female mice have higher plasma estrogen levels at the juvenile stage

(Saito et al., 2009). If female mice were used, the femoral shortening may be more pronounced.

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The effects of chondrocyte senescence in the epiphyseal plate should also be considered. Lui,

Nilsson, & Baron (2011) describe that as the number of cell divisions accumulate, resting

chondrocytes may gradually lose their replicative capacity. This would translate into

proliferating chondrocytes with diminished proliferation and then growth deceleration. It is

possible that every proliferating chondrocyte is affected by an intracellular or extracellular ‘cell

cycle counter’ factor that progressively changes with each cell division. Interestingly, estrogen

has been suggested to increase the loss of proliferative capacity per cell cycle (Schrier et al.,

2006). P5 Aqp9 -/- mice likely exhibit accelerated proliferation that underscores their elongated

tibias, whereas P21 mutants likely exhibit subsequent decelerated proliferation that captures their

shortened femurs. Both observations would be supported by epiphyseal plate examination and

chondrocyte gene profiling.

Overall, Aqp9 -/- mice appear to experience subtle hindlimb defects at P5 and P21. Aqp9 may

have differential distribution on the chondrocyte membrane depending on the specific bone and

stage of endochondral ossification. Aqp9 may also be under the control of factors such as

estrogen, and its deletion may elicit the early bone elongation and later bone shortening through

accelerated but ultimately impeded growth. The observations suggest that Aqp9 may be a highly

plastic channelome gene that plays inconsistent roles in regulating long bone growth when

deleted in a mouse model.

5.2 Epiphyseal plate irregularities underscore Aqp9-mediated bone

length

5.2.1 P5 Aqp9 -/- mice have expanded distal femur proliferating zones

To determine the cause of the P5 bone phenotype, WT and Aqp9 -/- littermate distal femur

epiphyseal plates were examined with H&E. Although the overgrowth phenotype occurred

significantly in the tibias only, femurs were selected to investigate if any epiphyseal plate

dysregulation could be observed in the adjoining hindlimb long bone. In mouse models with long

bone phenotypes, spatial irregularities in those epiphyseal plate zones are predominantly

guaranteed. Hence, investigating the tibia histologically was determined to be repetitious as

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epiphyseal plate growth is predominantly coupled with bone formation (Jones et al., 2010).

Additionally, the P5 knee sections used in this study provided the best visual clarity at the distal

femur. The femur was therefore investigated; any defect observed in the Aqp9 -/- femur

epiphyseal plate would support not only how the tibial overgrowth occurs, but also the

possibility of the mutation affecting the whole hindlimb.

In the P5 Aqp9 -/- distal femur epiphyseal plate, the average height of the proliferating zone is

significantly expanded compared to the WT epiphyseal plate. No significant differences are

observed in the hypertrophic zone. The proliferating zone also features a significantly higher

number of chondrocytes per column. The cellular density in Aqp9 -/- proliferating and

hypertrophic zones did not significantly differ from that of WT littermates.

Based on the observed long bone phenotype and literature supporting accelerated proliferation,

the proliferating and hypertrophic zones were focused upon to determine if their morphology

would reflect the overgrowth. This was also supported by the fact that Aqp9 is unavailable to

likely transport H2O2 into the chondrocyte and induce hypertrophy, which may allow

chondrocytes to retain a proliferative phenotype for longer than usual in the epiphyseal plate.

The resting zones were more dispersed and difficult to border, and were not measured in this

figure. The Aqp9 -/- proliferating zone appears to have more acellular matrix surrounding the

chondrocytes, possibly due to more synthesis of type II collagen and aggrecan than in the WT

epiphyseal plate. However, a greater area of matrix and chondrocytes may have leveled off the

cellular density in comparison to the WT proliferating zone. The hypertrophic zones in WT and

Aqp9 -/- mice feature chondrocytes of varying shape and size that may influence the number of

cells permitted in the zone. Increasing the sample size of epiphyseal plates may provide a more

accurate representation. Importantly, the higher number of chondrocytes per column in the Aqp9

-/- epiphyseal plate is a hallmark of accelerated proliferation (Lui et al., 2011).

The expansion of the proliferating zone in P5 Aqp9 -/- mice supports the longer bone phenotype

observed. Many knockout mouse models that feature long bone phenotypes, such as

Fgfr3floxneo/floxneo mice, have increased expansion of proliferating and hypertrophic zones (Su et

al., 2010). However, knockout mouse models such as Stat1 -/- present with early longer bones

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and a proliferating zone-specific expansion, as observed with the P5 Aqp9 -/- mice (Sahni, Raz,

Coffin, Levy, & Basilico, 2001). Interestingly, STAT1 is a negative regulator of chondrocyte

proliferation and promoter of chondrocyte apoptosis through upstream FGFR3 signalling (Sahni

et al., 1999). This coincides with the observation that chondrocyte deletion of Aqp9 results in

improved cell viability after H2O2 treatment (Shao et al., 2016). As STAT1 is also activated

through H2O2 induction, the two genes may normally share a hypoxic method of promoting

physiological apoptosis in the epiphyseal plate (Burova, Grudinkin, Bardin, & Gamaleĭ, 2001).

Their deletion, however, may lead to expansion of the proliferating zone and subsequently longer

bones. Aqp9 may function in a similar proliferation-specific manner as Stat1 in the epiphyseal

plate to regulate bone growth.

Histological examination of the P5 Aqp9 -/- distal femur epiphyseal plate indicates that an

irregular enlargement of the proliferating zone underscores not only the tibial long bone

phenotype, but the possible enlargement of other hindlimb bones as well. Deletion of Aqp9 may

promote a proliferation-leaning, anti-apoptotic phenotype that accelerates early growth and is

highlighted by expansion of the epiphyseal plate proliferating zone.

5.2.2 P21 Aqp9 -/- mice present with typical epiphyseal plate zones

To determine the cause of the P21 bone phenotype, WT and Aqp9 -/- littermate proximal tibia

epiphyseal plates were examined with a primary antibody against Col10a1. Col10a1 is a marker

of chondrocyte hypertrophy and was expected to stain robustly in the hypertrophic zones. In

particular, the hypertrophic zone was of interest as a shorter bone phenotype is often rooted in

defected chondrocyte hypertrophy (Shu et al., 2011). Using a marker of hypertrophy served to

investigate if any hypertrophy defect would be apparent by P21 to explain the Aqp9 -/- short

bone phenotype. Although the short bone phenotype occurred significantly in the femurs only,

proximal tibias were selected for the aforementioned reason of redundancy in epiphyseal plate-

bone growth coupling. Furthermore, only tibial sections were available. The tibia was therefore

investigated histologically as an alternative. Any irregularity in Col10a1 staining of the Aqp9 -/-

proximal tibia epiphyseal plate would support not only how the femoral shortening occurs, but

also the possibility of defected hypertrophy throughout the hindlimb at the juvenile stage.

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In the P21 Aqp9 -/- proximal tibia epiphyseal plate, the ratio of the hypertrophic zone to the

resting-proliferative zone is not significantly different from that of WT littermates. Similarly, the

observable epiphyseal plate heights did not significantly differ either. As mice age, the rate of

longitudinal growth also slows and is reflected by an increasing ratio of hypertrophic zone height

to proliferating zone height (Lee, Song, Pai, Chen, & Chen, 2017). It was postulated that in mice

with comparatively lower rates of growth and shorter bones—as expected in P21 Aqp9 -/-

mutants—this ratio would be higher.

Overall, the P21 Aqp9 -/- proximal tibia epiphyseal plate is comparable to that of P21 WT mice.

Interestingly, the knockout of genes contributory to endochondral ossification do not always

result in drastic adult skeletal phenotypes. MATN3 is an aforementioned gene that encodes non-

collagenous ECM and is mutated in many epiphyseal dysplasias (Klatt et al., 2000). Embryonic

Matn3 -/- mice have hypertrophic zones 47% larger than that of embryonic WT mice, but no

long bone phenotype is observed during development or adulthood in the mutants (van der

Weyden, 2006). In the case of Aqp9 -/-, a juvenile short bone phenotype is observed but may not

necessarily be due to irregularities of the epiphyseal plate. In P15 Stat1 -/- mice, the epiphyseal

plate differences underlying the early long bone phenotype are attenuated (Sahni et al., 2001).

Hence, it possible that temporary expansions of epiphyseal plate zones do not persist into later

development. However, it is more probable that due to the small sample size of biological

replicates, the analysis is not statistically powerful. Repetition of the experiment with a greater

sample size may find that the P21 Aqp9 -/- hypertrophic zone consumes more area in the

epiphyseal plate, and that the entire epiphyseal plate is significantly shorter.

5.2.3 18 month old Aqp9 -/- mice show prominent epiphyseal plate narrowing and

reduction of primary bone marrow adipose tissue

Previously, Liu et al. (2007) had isolated femurs and tibias from one year old female WT and

Aqp9 -/- mice and found no significant difference in length between the WT and Aqp9 -/- bones.

This was not consistent with the short bone phenotype observed in the male P21 Aqp9 -/- mice.

The Aqp9 -/- mice were derived from C57BL/6 mice in both studies, suggesting that strain-

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specific differences cannot be implicated. This suggests that the bone phenotype may not persist

into adulthood, or that sex differences complicate measurement consistency. Indeed, female

C57BL/6J mice experience greater age-related declines in femoral bone volume and length than

males over time (Glatt, Canalis, Stadmeyer, & Bouxsein, 2007). The absence of Aqp9 in old

male mutants was therefore unexplored, and may present with different long bone observations

than those of female mice.

Observing the old epiphyseal plate is a strong indicator of whether or not long bone growth has

been arrested. Epiphyseal plate narrowing and closure into the epiphyseal line indicates that

chondrocyte proliferation has stopped and that bone growth can no longer proceed (Shim, 2015).

However, longitudinal bone growth does not cease in mice at sexual maturity like humans; the

rate of growth dramatically slows instead (Jilka, 2013). In mice, total epiphyseal plate fusion

does not occur but narrows as the growth velocity approaches zero (Kilborn, Trudel, & Uhthoff,

2002; Emons, Chagin, Sävendahl, Karperien, & Wit, 2011). Unusually narrow old epiphyseal

plates or striking abnormalities would then indicate a defect in bone growth and provide insight

into the final long bone length. Hence, male WT and Aqp9 -/- mice were aged to 18 months for

epiphyseal plate analysis to observe if they would reflect a shorter bone phenotype, as observed

in the male P21 mutants.

18 month old male WT and Aqp9 -/- femoral heads were examined with Toluidine blue to

analyze their cartilaginous epiphyseal plates. Femoral heads were selected due to their

availability from previous experiments in the Kannu lab. In the Aqp9 -/- mice, the epiphyseal

plate does not appear to reach the cortical bone on the right-side and is instead ablated. The

observation was initially thought to be due to sectioning inconsistencies that caught the Aqp9 -/-

epiphyseal plates at a particular depth, but statistical analysis shows the same trend and

significantly reduced width across all Aqp9 -/- biological replicates compared to WT replicates.

Overall, analysis of old male WT and Aqp9 -/- mice suggest that 18 month old male Aqp9 -/-

mice not only experience a more rapid disappearance of the epiphyseal plate, but that it may

translate into subtle long bone defects. A quicker narrowing of the epiphyseal plate suggests that

the long bone growth rate is reduced, and that the final bone length may be shortened in

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comparison. This is consistent with precocious puberty, where an accelerated period of growth—

as observed at P5—ultimately results in diminished growth by adulthood. Although this

phenotype is observed as early as in P21, the 18 month old observations here suggest that this

irregular narrowing may occur as early as the juvenile stage and into the geriatric stage.

However, epiphyseal plate analyses at each of the hindlimb bones would be required to identify

if Aqp9 deletion continues to affect specific long bones. Nevertheless, the irregular epiphyseal

plate narrowing observed here in the old age Aqp9 -/- femur is consistent with the femoral short

bone phenotype in the P21 mice. In other mutant mouse models—such as deletion of Ahsg, an

inhibitor of skeletal mineralization—discontinuities along the old epiphyseal plate also

underscore accelerated ossification and shortened long bones (Seto et al., 2012).

Interestingly, the Aqp9 -/- primary bone marrow also presented with a drastic reduction of white

adipose tissue in comparison to WT littermates. This reduction of fat was accompanied by an

increase of visible HSCs, as shown in the small, stained spots distributed throughout the bone

marrow. Typically, fat content in the femoral bone marrow increases with age (Tuljapurkar et al.,

2011). However, a lack of adipose tissue is not necessarily suggestive that the bone is immature.

When MSCs decide on a cellular lineage, they can differentiate into chondrocytes and

fibroblasts, pre-osteoblasts, or pre-adipocytes (Rosen, Ackert-Bicknell, Rodriguez, & Pino,

2009). However, the presence of marrow adipocytes may be self-promotive and induce the

differentiation of MSCs into adipocytes, preventing other cellular lineages from being attained

(Duque, 2007). In the Aqp9 -/- bone marrow, a severely diminished amount of adipose tissue

suggests that the majority of MSCs have likely committed to other lineages instead—such as

chondrogenesis or osteoblastogenesis—without coercion by adipocytes. Without fatty bone

marrow, it is possible that old Aqp9 -/- mutants proceeded with endochondral ossification at a

faster rate than WT mice because the available MSCs were condensed for long bone growth

instead. This would support the hypothesis that Aqp9 -/- mutants experienced accelerated growth

at a younger age. Furthermore, bone marrow adipocytes function to release fatty acids and

provide energy for bone growth, remodelling, and hematopoiesis (Veldhuis‐Vlug & Rosen,

2017). A reduction of adipose tissue may also suggest that during early endochondral

ossification, Aqp9 -/- chondrocytes rely on fatty reserves for accelerated growth. Examination of

the bone marrow at various timepoints would be required to verify this possibility.

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It is also possible that the reduced bone marrow adipose tissue is reflective of protection against

bone resorption through Aqp9 deletion. Bone quality declines with aging and subcutaneous fat

redistributes to sites such as the bone marrow, heart, and liver (Tchkonia et al., 2010; Rodríguez,

Catalán, Gómez-Ambrosi, & Frühbeck, 2006). A reduction of bone marrow adipose suggests that

the 18 month Aqp9 -/- mice may be protected against age-related biasing of adipogenesis and

bone loss. This suggests that Aqp9 may continue to be a negative regulator of bone growth in

adulthood. This also appears to parallel the findings of Bu et al. (2012), where ten week old Aqp9

-/- mice were protected against microgravity-induced bone resorption. In aging bone marrow

stromal cells, ROS accumulation prevents their ability to maintain HSCs (Khatri et al., 2016;

Anthony & Link, 2014). Simultaneously, this invites adipocyte accumulation in the bone marrow

that further impairs hematopoiesis and bone regeneration (Ambrosi et al., 2017). In Aqp9 -/-

mice, a lack of functional Aqp9 may prevent endogenous cytoplasm H2O2 accumulation or

intercellular H2O2 transport in the bone marrow. Hence, the Aqp9 -/- bone marrow

microenvironment may favor HSC maintenance instead of adipogenesis, resulting in the reduced

bone marrow adipose observed at 18 months. This mechanism may suggest that reduced bone

marrow adipose in 18 month Aqp9 -/- mice is not age-oriented, but rather a functional

consequence of Aqp9 absence. Nevertheless, the irregular epiphyseal plate narrowing suggests

that Aqp9 deletion induces a diminished long bone growth rate in adulthood.

5.2.4 E16.5 Aqp9 -/- mice have irregular epiphyseal plate resting zones

To determine if Aqp9 affects endochondral ossification during development, E16.5 WT and

Aqp9 -/- littermate proximal tibia epiphyseal plates were examined with Safranin-O. Proximal

tibias were selected due to their availability from previous experiments in the Kannu lab. At

E16.5, the developing embryo is at the halfway point between when endochondral ossification

commences—at approximately E10.5—and when birth occurs—at approximately E21.0. Hence,

E16.5 is a prime timepoint to examine endochondral ossification in development. Here, the

average Aqp9 -/- resting zone height is significantly shorter than that of WT littermates. No

significant differences were observed in the proliferating and hypertrophic zones. Consequently,

the fraction of the whole epiphyseal plate that contains proliferating and hypertrophic

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chondrocytes is significantly greater in the Aqp9 -/- mice than in WT mice. Although the

proliferating and hypertrophic zones are a popular focus in mutant mouse models, the height of

the resting zone has been scrutinized in Smad4 mutants. SMAD4 is a member of the SMAD

family and signals under BMP and TGF-β as early as in mesenchymal differentiation (Wu, Chen,

& Li, 2016). In Col2a1-Cre; Smad4Co/Co mice, the conditional deletion of Smad4 results in

newborn dwarfism characterized by a drastically expanded resting zone (Zhang et al., 2005). In

E16.5 Aqp9 -/- mice, a diminished resting zone may suggest the opposite. Skeletal staining at

E16.5 would be required to verify long bone lengths in comparison to WT littermates.

The resting zone is host to chondrocytes that are stem-like; they can divide and differentiate into

proliferating chondrocytes but with a limit reflecting a senescence factor (Abad et al., 2002). A

depletion of resting chondrocytes is indicative of proliferative capacity expenditure, which is

suggested to underlie the natural decline in long bone growth rate with age (Schrier et al., 2006).

The irregular central ‘caving’ of the proliferating zone into the resting zone in the Aqp9 -/-

embryos suggests that a greater proportion of resting chondrocytes are differentiating during

development. Hence, the resting zone is diminished in height while the proliferating and

hypertrophic zones together are expanded in height. This observation reflects the hypothesis that

Aqp9 deletion results in an early accelerated phenotype at the epiphyseal plate, which may occur

in development before P5. In epiphyseal plate senescence, Lui et al. (2011) discuss that during

accelerated growth, resting chondrocytes sacrifice proliferative capacity to produce more

proliferating chondrocyte columns in the short term. This comes at a cost of the resting zone cell

density and lifespan, and may require spatial decline as the proliferating zone consumes a greater

area. Here, an irregularly diminished resting zone in E16.5 Aqp9 -/- mice reflects the theory.

Although the P5 epiphyseal plate resting zones were not measured in this study, the observation

coincides with the P5 Aqp9 -/- proliferating zone expansion. Therefore, the tibial overgrowth

observed in Aqp9 -/- mutants may commence in development as early as E16.5.

Overall, shortened proximal tibia resting zones in developing Aqp9 -/- mice suggest that their

epiphyseal plates host chondrocytes that may differentiate faster. This phenotype may persist

postnatally into the P5 age where Aqp9 -/- mice show expanded tibial proliferating zones and

longer tibias than their WT littermates. However, accelerated differentiation likely leads to early

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epiphyseal plate senescence and slower growth rate, as observed in the shortened P21 Aqp9 -/-

femurs. By adulthood, the epiphyseal plate shows more prominent narrowing than WT

littermates, suggesting that the growth rate has rescinded more rapidly into maturity due to the

precocious overgrowth observed.

5.3 Aqp9 mutant chondrocytes show a differential phenotype

5.3.1 P5 Aqp9 +/- and Aqp9 -/- epiphyseal plate chondrocytes proliferate irregularly

To support the role of Aqp9 as a regulator of chondrocyte differentiation and long bone growth,

the investigation was continued at the cellular level. The P5 timepoint was chosen because:

1) Early long bone phenotypes in mutant mouse models are infrequent, and

2) Epiphyseal plate chondrocytes at the P5 timepoint are excised without complication.

A cell proliferation experiment was performed by seeding WT, Aqp9 +/-, and Aqp9 -/-

epiphyseal plate chondrocytes for cell counts over 96 hours. Over the experiment duration, WT

chondrocytes did not differ significantly in cell number from Aqp9 +/- or Aqp9 -/- chondrocytes

during any timepoints except at the 48 hour timepoint. By the final timepoint, all samples

approached the expected confluency of 1.2 x 106 cells.

From 0-96 hours, the WT plot appears relatively linear and deviates from an expected

exponential rate of growth in culture. While exponential growth is observed from 0-48 hours, the

slope plateaus greatly by the 72 hour timepoint before approaching confluency. This may be

attributed to cellular density or natural declines in chondrocyte proliferation that may be

triggered by culture conditions (Lui & Baron, 2011). The Aqp9 -/- plot shows a striking

difference at the 48 hour timepoint in comparison to the WT plot; rather than experiencing

exponential growth, the cell number was only marginally higher than that of the 24 hour

timepoint. At the 48 hour timepoint, the Aqp9 -/- number is ~4 x 105 lower than that of the WT.

However, at the 72 hour timepoint, the Aqp9 -/- number jumped to ~1 x 106. The slope declines

greatly by the 96 hour timepoint, likely due to cellular density as plate confluency is approached.

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The Aqp9 +/- plot parallels the Aqp9 -/- plot, although the jump from 48-72 hours is not as

drastic. Nevertheless, the Aqp9 +/- chondrocytes matched the WT chondrocyte cell number at the

72 hour timepoint despite a lower count by comparison at the 48 hour timepoint. As the most

striking change occurs between the 48-96 hours, the rates there can be calculated as follows:

Table 5.1. Primary epiphyseal plate chondrocyte proliferation rates (48-96 hours)

Sample genotype (Cell number at 96 hours – cell number at

48 hours) / (96 hours – 48 hours) Rate (cells/hour)

WT (~1x106 – ~5.5x105) / 48 ~9375

Aqp9 +/- (~9.5x105 – ~2x105) / 48 ~15625

Aqp9 -/- (~1.5x106 – ~2.5x105) / 48 ~26042

Here, both Aqp9 +/- and -/- chondrocytes appear to have accelerated proliferation following an

apparent pause in growth, in comparison to WT chondrocytes. However, their rates from 0-96

hours do not differ as they start and end at approximately the same cell number counts. In the

growing rat epiphyseal plate, this phenomenon of ‘catch-up growth’ is observed in proliferating

chondrocytes immediately after cessation of dexamethasone, a growth inhibitor (Chagin,

Karimian, Sundström, Eriksson, & Sävendahl, 2010). Deletion of Aqp9 may promote cell

proliferation after suppression through an unexplored mechanism. The pause in growth at the 48

hour timepoint may also be caused by an unexplored mechanism. Interestingly, the error bars for

all chondrocyte counts at this timepoint appear narrower than those of the other timepoints. This

may be due to a small sample size resulting in a statistical anomaly. Nevertheless, the error bars

for the Aqp9 -/- chondrocyte count at 72 hours are remarkably wide and suggest that further

repetition of the experiment would be supportive. Increasing the sample size would be beneficial

to reduce the variance.

In normal epiphyseal plate chondrocytes, H2O2 is involved in a variety of signal transduction

pathways. Intercellular H2O2 transport is only reported among aquaporin homologues (Bienert,

Schjoerring, & Jahn, 2006). However, the cellular production of H2O2 is mainly derived from the

mitochondrial matrix and intermembrane space (Boveris & Cadenas, 2000). Hence, the transport

of H2O2 from the mitochondria to the cytoplasm likely requires Aqp9 function, or other

aquaporin isoforms that are capable such as Aqp3 and Aqp8. AQP9 protein localization in

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mitochondria has been described, although aquaporin transport functionality in mitochondria has

been argued against due to a lack of physiological consequence in several aquaporin mutants

(Lindskog, Asplund, Catrina, Nielsen, & Rützler; 2016; Yang, Zhao, & Verkman, 2006). It is

also possible for H2O2 to alternatively exit the mitochondria through initial enzymatic conversion

to superoxide, and then passage through the electron transport chain proteins and voltage-

dependent anion channels (Han, Canali, Rettori, & Kaplowitz, 2003). Nevertheless, Aqp9 is a

channelome member and is likely expressed on the chondrocyte mitochondrial membrane,

allowing passage of H2O2 into the cytoplasm. Further study such as Aqp9 immunostaining of the

murine chondrocyte mitochondria would confirm its membrane expression. Outside the

mitochondria, members of the HIF family are stimulated through mTOR signalling (Land & Tee,

2007; Mohlin et al., 2015). mTOR signalling is repressed by AMPK signalling, which in turn is

repressed by H2O2 (Lennicke, Rahn, Lichtenfels, Wessjohann, & Seliger, 2015). Hence, H2O2 is a

stimulator of HIF activity. In particular, HIF2α is a HIF homologue stabilized by H2O2 oxidative

stress and induces chondrocyte hypertrophy by binding to the COL10A1, MMP13, and VEGFA

promoters in the nucleus (Diebold et al., 2010; Saito et al., 2010). From mitochondria to nuclear

transcription, the transport of H2O2 to the cytoplasm likely relays stimulus for chondrocyte

hypertrophy. When extra-mitochondrial transport of H2O2 is diminished, hypertrophy may be

delayed. In Aqp9 -/- chondrocytes, it is possible that a proliferative phenotype is attained this

way. This would support the irregular proliferation rate observed in this experiment, the

expanded proliferating zone, and early long bone phenotype observed at P5.

It is also possible that deletion of Aqp9 induces a ‘mitotic wave’. Rabbit articular chondrocytes

treated with TGF-β1 show increased DNA replication rates, a sequestering of chondrocytes in

the G2/M checkpoint, and a subsequent wave of mitosis (Vivien et al., 1993). This would require

a temporary increase in proliferation rate as shown in the Aqp9 -/- chondrocytes. The catch-up

growth between 48-96 hours of culture may be reflective of this pattern. However, the

relationship between TGF-β and Aqp9 in the epiphyseal plate has not been explored. Overall,

Aqp9 may be important in chondrocyte proliferation in the early pup stage. From the

observations, Aqp9 may be a negative regulator as its deletion induces a different proliferation

trend compared to WT chondrocytes. Deletion of Aqp9 may induce a proliferating-leaning

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chondrocytic phenotype by barring physiological levels of H2O2 from stimulating hypertrophy at

a regular rate.

5.3.2 P5 Aqp9 +/- and Aqp9 -/- epiphyseal plate chondrocytes have differential gene

expression profiles

To clarify the proliferation rate difference observed in P5 Aqp9 +/- and -/- chondrocytes—

however limited to specific experimental timepoints—their gene expression profiles were

investigated. P5 WT, Aqp9 +/-, and Aqp9 -/- epiphyseal plate chondrocytes were subjected to

qPCR gene expression analysis. The fold change levels of several hypertrophic markers in the

Aqp9 +/- and -/- chondrocytes were not significantly different relative to the WT control. In Aqp9

-/- chondrocytes, the fold change of the one marker of proliferation, Sox9, was significantly

increased. Aqp9 expression was significantly decreased. The Aqp9 +/- chondrocytes did not

follow these changes as consistently. There was a significant reduction of Mmp13 expression in

the Aqp9 +/- chondrocytes compared to the WT chondrocytes.

In Aqp9 -/- chondrocytes, the increase of Sox9 is indicative that their gene profiles lean towards a

proliferative phenotype. In Aqp9 +/- chondrocytes, the significant decrease of Mmp13 is

indicative that they are resisting the hypertrophic phenotype, where Mmp13 would be increased.

While the fold changes of the remaining hypertrophic markers—Col10a1 and Runx2—were not

statistically significant in both Aqp9 -/- and +/- chondrocytes, their direction of change is

noteworthy. Since Aqp9 expression changes in the same direction as the hypertrophic marker

genes and also opposes the fold change direction of the proliferative marker Sox9, Aqp9 may be

a contributor to chondrocyte hypertrophy upstream of Col10a1, Mmp13, and Runx2. It is also

possible that the mutant chondrocytes invoke surveillance mechanisms to ensure appropriate

mRNA quality, influencing the gene profile readout observed. Mammalian cells are capable of

using the Nonsense-mediated decay pathway, a RNA surveillance mechanism that targets

mRNAs with premature stop codons for deletion to prevent production of truncated proteins

(Hug, Longman, & Cáceres, 2016). If this pathway is activated in the mutant chondrocytes, the

significant fold change decrease of Aqp9 may not be reflective of reduced hypertrophy but of

Nonsense-mediated decay checking the Aqp9 mutation instead. Furthermore, the non-significant

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change of Col10a1 and Runx2 in both Aqp9 -/- and +/- chondrocytes relative to the WT

chondrocytes may be analytical error due to a low number of biological replicates. Repetition

with a greater number of replicates may produce a more consistent gene profile.

Other mutant mouse models with deletion of genes critical to chondrogenic differentiation have

similar patterns of chondrocyte marker expression. MAP3K7 is a gene encoding TAK1, an

enzyme critical to the TGF-β and BMP pathways (Le Goff et al., 2016). In chondrocyte-specific

deletion of Tak1 in P7 mice, there is an accompanying significant decrease in expression of Sox9

and Col2a1 while Mmp13 expression increases (Gao et al., 2013). In Aqp9 -/-, the same pattern

of proliferative and hypertrophic marker expression is observed in the opposite fold change

direction. Hence, deletion of Aqp9 appears to be deletion of a functional hypertrophy inducer.

It is possible that certain signalling molecules transported among epiphyseal plate chondrocytes

in culture by Aqp9 influence the expression of hypertrophic genes. If functional Aqp9 is ablated

as in Aqp9 -/- chondrocytes, then a reduction of those transported molecules may trigger non-

physiological pathways leading to reduced transcription factor-promotion of genes like Col10a1,

Mmp13, and Runx2. Epiphyseal plate chondrocytes can exchange micro RNAs among one

another through extracellular vesicles to elicit chondrogenic differentiation (Lin et al., 2018).

However, the function of Aqp9 in chondrocyte matrix vesicle communication has not yet been

explored. The hypothesized blockage of endogenous H2O2 from exiting the chondrocyte

mitochondria may also be responsible for the decreased expression of hypertrophic genes.

Without Aqp9 to transport H2O2 and stabilize Hif2α, binding to Col10a1 and Mmp13 promoter

regions is likely reduced, resulting in diminished hypertrophy. It is also important to consider

that cellular hypertrophy is maintained by the cytoskeleton. This cellular network of

microtubules, actin, and other diverse filaments provides the physical structure for chondrocyte

shape and henceforth governs—at least partially—chondrocyte phenotype (Benjamin, Archer, &

Ralphs, 1994). Interestingly, actin-containing cytoplasmic projections known as filopodia were

upregulated in murine fibroblasts when transfected with a human aquaporin-9 (AQP9)

overexpression vector (Loitto et al., 2007). It was hypothesized that a specific water/solute

transporter increased hydrostatic pressure within the membrane-cytoskeleton space to permit

outward filament elongation and form extracellular protrusions. Karlsson et al. (2013) confirmed

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this with a model for AQP9-induced membrane projection in embryonic kidney cells,

demonstrating that local membranous accumulation of AQP9 initiates protrusion and subsequent

extension of the actin cytoskeleton. In Aqp9 -/- chondrocytes, lack of functional Aqp9 may

inhibit the cytoskeleton plasticity necessary to initiate and maintain the hypertrophic shape.

In summary, P5 Aqp9 -/- epiphyseal plate chondrocytes express gene profiles that appear to

oppose hypertrophy and favor proliferation, as noted by the significant expression increase of

Sox9—a promoter of chondrocyte proliferation and inhibitor of hypertrophy. This may explain

the differential proliferation rate of Aqp9 -/- chondrocytes, leading to expansion of the

proliferating zone and accelerated long bone growth at the pup stage. A chondrocyte

proliferation increase in the fetal metatarsal epiphyseal plate via insulin and IGF-1 treatment

results in increased proliferating zone length and total bone length (Zhang et al., 2014). Deletion

of chondrocyte Aqp9 may mimic this mitogenic effect.

5.3.3 Aqp9 knockdown in P5 WT epiphyseal plate chondrocytes induces a gene profile

similar to Aqp9 -/- chondrocytes

In the Aqp9 +/- and Aqp9 -/- chondrocytes, it is possible that their gene expression profiles were

not induced within the chondrocyte but were rather a consequence of signalling from other

organs, such as the bone. Hence, P5 WT chondrocytes were excised and transfected with an

Aqp9-siRNA to determine if a similar gene profile could be adopted. If so, any Aqp9 -/- cellular

phenotypes can be accredited to processes occurring specifically in the chondrocytes in a cell

autonomous manner.

Overall, there were no significant differences in gene expression after Aqp9 silencing. However,

the direction of change of each gene probe is noteworthy. The direction of change of the

hypertrophic markers—Col10a1, Mmp13, and Runx2—was downward, and the proliferative

marker—Sox9—was upward. The direction of change of Aqp9 expression was also downward.

Importantly, the overall gene profile of WT-siRNA reflected the gene profile of the Aqp9 -/-

chondrocytes. This supports that Aqp9 knockdown alone is able to influence the expression of

chondrocyte proliferative and hypertrophic markers, and that the similar gene profile observed in

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Aqp9 -/- chondrocytes was not attributed to external factors such as the generation of the Aqp9 -/-

mutant mouse itself. The lack of observed statistical significance is likely due to a small sample

size. The incubation time post-transfection may also be on the shorter end of the protocol

recommendation. The Aqp9 siRNA oligomer concentration may also be insufficient. The error

bars for all gene probes are wide, hinting at deviant fold change values among the biological

replicates.

In this experiment, knockdown of Aqp9 in WT chondrocytes was able to simulate the Aqp9 -/-

chondrocyte gene profile. A natural inhibitor of Aqp9 named phloretin is able to decrease

expression of MMP13 and prevent the degradation of type II collagen, albeit in human articular

chondrocytes (Zheng, Chen, Zhang, Cai, & Chen, 2018). The use of phloretin to target Aqp9 in

epiphyseal plate chondrocytes is unexplored. Nevertheless, the concomitant downregulation of

hypertrophy-related genes following Aqp9 inhibition is well-reported.

5.4 A model for Aqp9 function in murine endochondral ossification

In this study, analysis of the literature and findings support a speculative model for the function

of Aqp9 in murine long bone growth. In Figure 5.1, the impact of Aqp9 deletion is described

from the chondrocytic level to the long bone at both P5 and P21. The steps synthesize the

aforementioned literature and results, and are described as follows:

1) The pathway starts in the developing epiphyseal plate. The ATP-synthesizing process of oxidative phosphorylation in the

epiphyseal plate chondrocyte mitochondrial matrix generates endogenous superoxide as a waste product, which is then

converted into H2O2.

2) H2O2 attempts to leave through H2O2 transporters along the mitochondrial membranes, but Aqp9 is not available for

transport due to the Aqp9 -/- mutation. Here, H2O2 may be sequestered in the mitochondria.

3) H2O2 can exit the mitochondria through alternative means, such as enzymatic conversion back to superoxide and then

transport through voltage-dependent anion channels. The rate of H2O2 departure is therefore diminished in Aqp9 -/-

chondrocytes.

4) Superoxide that is transported into the cytoplasm can be reconverted into H2O2. H2O2 can function to repress AMPK,

which is a repressor of mTOR. H2O2 is then an activator of mTOR. However, loss of Aqp9 suggests that less-than-

physiological H2O2 will be present in the cytoplasm, so mTOR activation may be diminished.

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5) H2O2 can repress PTP, which is a repressor of Akt (Lennicke et al., 2015). Akt is a factor that ultimately activates mTOR.

Once again, H2O2 is an activator of mTOR—but without physiological concentrations of H2O2 in the cytoplasm due to

Aqp9 deletion, mTOR activation may be repressed.

6) mTOR is an activator of Hif2α, a hypertrophy inducer in chondrocytes. Oxidative stress conferred by cytoplasmic H2O2

normally stabilizes Hif2α. However, Aqp9 deletion suggests less cytoplasmic H2O2 and therefore less Hif2α.

7) Normally, Hif2α binds to the promoters of hypertrophy genes in the nucleus to promote the hypertrophic phenotype.

Without physiological amounts of Hif2α, fewer hypertrophy genes are transcribed and the proliferative phenotype is more

likely to be retained.

8) In the P5 Aqp9 -/- mouse, more proliferation allows endochondral ossification to occur at a faster rate than usual.

Circulating estrogen finds that there is no Aqp9 target to bind and instead binds available growth hormone receptors,

further accelerating growth at this stage. The growth phenotype becomes localized in the hindlimb, which Tbx4 governs

in development. Furthermore, the Shox transcription factor finds there is no Aqp9 promoter to bind, possibly inducing a

rhizomelic effect in the tibia along with Runx2 and Ihh. Ultimately, a long bone phenotype is observed in the tibia bones.

9) As the Aqp9 -/- mouse ages, it continues to undergo endochondral ossification as the epiphyseal plate narrows. Due to the

precocious overgrowth, the epiphyseal plate has become more senescent than usual. The resting chondrocytes have lost

more replicative capacity than usual. The rate of long bone growth has become gradually retarded relative to WT mice.

10) By P21, the Aqp9 -/- mouse experiences the consequences of accelerated growth. Circulating estrogen now hastens

epiphyseal plate narrowing, further resulting in slower growth rate. The shortening phenotype is still localized in the

hindlimb, likely through Tbx4. However, the Shox transcription factor now induces a mesomelic effect in the femur,

possibly through dysregulation of Fgfr1. Finally, the femur bones are shorter.

11) In WT mice, epiphyseal plate chondrocytes maintained physiological levels of cytoplasmic H2O2 due to functioning Aqp9

transporters. Chondrocyte hypertrophy occurred naturally without a proliferative-leaning phenotype. As a result, P5 WT

mice have shorter tibia bones compared to their Aqp9 -/- littermates. By P21, a regular rate of growth has allowed for the

WT mice to have longer femur bones instead. Throughout growth in the WT mice, Aqp9 is able to interact normally with

its transcription factors.

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ECM / Extracellular space

Chondrocyte cell membrane

Chondrocyte cytoplasm

Mitochondrial matrix

Intermembrane space

Mitochondria

H2O2

Oxidative

phosphorylation

H2O2

Nucleus (not to scale)

AMPK

mTOR

Hif2α

Etc…

Col10a1

Mmp13

Vegfa

PTP

Akt

Alternative

exit

1

2

3

4

5

6

7

Aqp9 -/-

H2O2

H2O2

H2O2

Figure 5.1. A model for Aqp9 function in murine endochondral ossification 124

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P5 P21

Tbx4

Aqp9 -/-

Shox, Runx2, Ihh

Estrogen (+growth)

Tbx4

Aqp9 -/-

Shox, Fgfr1

Estrogen (-growth)

WT growth scenario

Tibia Femur

P5 P21

Aqp9 Aqp9

Tibia Femur

8

9

10

11

Regular TF-promoter interaction Regular TF-promoter interaction

Figure 5.1. cont. 125

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6 Conclusions

To address whether Aqp9 is important in endochondral ossification, Aqp9 -/- mice were

examined at the long bone, epiphyseal plate, and chondrocyte levels from the pup stage to old

age. At P5, Aqp9 -/- mice have significantly longer tibia bones than their WT littermates. At P21,

Aqp9 -/- mice have significantly shorter femur bones than their WT littermates. These defects

suggested that Aqp9 deletion may induce accelerated neonatal growth that stunts skeletal length

by the juvenile age, albeit in specific hindlimb bones. Hindlimb epiphyseal plates were then

examined to see if dysregulation in the epiphyseal plate zones would underscore the bone

phenotypes. Analysis of the P5 Aqp9 -/- femur epiphyseal plate showed expansion of the

proliferating zone, supporting a long bone phenotype throughout the hindlimb. However,

analysis of Col10a1 staining in the P21 Aqp9 -/- tibia epiphyseal plate did not show any

remarkable dysregulation. Examination of 18 month Aqp9 -/- femur heads showed irregular

narrowing of the epiphyseal plate and reduced adipose tissue in the bone marrow, suggesting that

old age Aqp9 -/- mice experience irregular growth earlier in their lifespan and resist bone marrow

adipose accumulation. E16.5 Aqp9 -/- embryo epiphyseal plates were also examined to determine

if Aqp9 is important in development; they showed significantly reduced resting zone heights,

indicating an early acceleration of chondrocyte differentiation. Finally, P5 Aqp9 +/- and Aqp9 -/-

epiphyseal plate chondrocytes were examined to see if their behaviour and gene expression could

explain the P5 bone phenotype and epiphyseal plate dysregulation. Aqp9 -/- chondrocytes

displayed an irregular rate of proliferation characterized by a lag in growth and then subsequent

recovery. Gene expression analysis of Aqp9 -/- chondrocytes showed a significant increase of

proliferative marker expression. Silencing of Aqp9 in P5 WT chondrocytes did not yield

significant expression differences, but was able to simulate the same directions of change

observed in the Aqp9 -/- chondrocyte gene probes. This suggests that Aqp9 -/- chondrocytes may

favour a proliferative phenotype in differentiation, supporting the expanded proliferating zone in

the P5 epiphyseal plate.

Aqp9 may be a negative regulator of neonatal bone growth. Deletion of Aqp9 appears to induce

chondrocyte proliferation and accelerate the process of endochondral ossification, leading to

bone-specific elongation in the hindlimb at P5. However, the accelerated growth may trigger

earlier senescence of the epiphyseal plate chondrocytes and ultimately delay growth, leading to

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the bone-specific shortening in the hindlimb at P21. The accelerated differentiation may start as

early as in development at E16.5, but the latent phenotypes are also observable at 18 months of

age. Aqp9 appears to function similarly to hypertrophic genes and its deletion promotes a

proliferative-leaning gene profile. Aqp9 is also a target of estrogen and SHOX, suggesting

another avenue by which Aqp9 deletion may dysregulate long bone growth. Aqp9 may normally

function with Tbx4 and unexplored factors related to mesomelic and rhizomelic disorders in

order to regulate growth in the hindlimb bones. At the chondrocyte level, Aqp9 may normally

shuttle endogenous H2O2 to the cytoplasm to activate hypertrophic genes and regulate the rate of

differentiation. Deletion of Aqp9 would then delay the hypertrophic phenotype.

The limitations of this study include methodological sample size, data measurement, and prior

available research of Aqp9. Regarding sample size, the immunohistochemistry and Safranin-O

staining experiments in this study did not meet a minimum of three biological replicates. Using a

larger sample size for each experiment would improve the statistical power of all analyses and

how representative they are of the Aqp9 mutation. Regarding data measurement, long bone

lengths and epiphyseal plate parameters were collected manually. Despite using digitally-assisted

calipers and software in a blinded setting, fully computerized scanning of long bones and

epiphyseal plates would improve the accuracy of all measurements. Regarding prior research,

investigations in Aqp9 are limited (<500 PubMed search results as of August 2018). It is

possible that a greater number of prior studies would help form a more comprehensive literature

review and discussion. Nevertheless, this limitation may describe a need for further biomedical

research of Aqp9.

Overall, this study demonstrated that Aqp9 plays a role in endochondral ossification. Deletion of

Aqp9 showed significant differences at the long bone, epiphyseal plate, and chondrocyte levels

as hypothesized. As a transporter of a known hypertrophy inducer, subject of regulation by

estrogen and Shox, and a chondrocyte channelome member, Aqp9 does not appear completely

dispensable in function. Aqp9 stands out as a unique aquaporin isoform and sheds light on how

the channelome can critically regulate chondrocyte differentiation in the epiphyseal plate.

Further investigation of Aqp9 chondrocyte function may unveil a novel therapeutic target for

combatting LLDs before resorting to invasive surgical intervention.

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7 Future Directions

7.1 In situ hybridization of Aqp9 during mesenchymal condensation

In this study, in situ hybridization of Aqp9 to the P14 murine WT epiphyseal plate revealed

robust expression in the proliferating and pre-hypertrophic zones. This suggests that Aqp9

functions postnatally to modulate long bone growth. However, endochondral ossification

commences during development at approximately E10.5. Here, mesenchymal condensation

occurs as the initiating step. To determine if Aqp9 is present at the embryonic level, in situ

hybridization could be performed to visualize Aqp9 RNA in the developing murine limb buds. A

multi-probe fluorescent in situ protocol targeting other genes important in condensation could

also be used to determine if Aqp9 is co-localized with them. During mesenchymal condensation,

the well-known Bmps and Fgfs are present as essential factors toward chondrogenesis (Hata et

al., 2017). However, limb outgrowth is also dependent on the Hox and Tbx genes, which

coordinate the spatial and temporal development of the limb (Guy & Clarke, 2008). Hence,

genes can be differentially expressed in the forelimb and hindlimb. The Hox genes contain

promoter regions that will only activate if a specific combination of transcription factors bind. In

general, Hox genes create positional memory in MSCs and influence their ability to differentiate

(Seifert, Werheid, Knapp, & Tobiasch, 2015). A variety of Hoxb isoforms and Hoxc4 have been

identified in murine MSCs, making them distinct markers of condensation (Phinney, Gray, Hill,

& Pandey, 2005). The Tbx genes determine limb identity, where Tbx5 is localized to the forelimb

only and Tbx4 is localized to the hindlimb only (Logan, 2003). If Aqp9 functions in the

developing limb, it may regulate these genes. A preliminary whole-mount in situ hybridization of

Aqp9 to WT E10.5 embryos can be performed to identify its expression, following the protocol

mentioned in this study with minor modifications for embryos (Koyama et al., 1996). If Aqp9

can be visualized in the developing forelimbs and hindlimbs, then a multi-plex assay can be

performed to check if Hox and Tbx are expressed in the same patterns. A multi-plex fluorescent

in situ assay can detect molecules for up to four RNA targets simultaneously, where Aqp9, Tbx4,

Tbx5, and Hoxc4 can be selected and designed as riboprobes. If Aqp9 fluorescence is co-

localized with that of the Hox or Tbx genes, it suggests that Aqp9 may help coordinate limb

outgrowth. Its deletion in Aqp9 -/- mutants would then dysregulate how endochondral

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ossification is initiated, possibly relaying into differential long bone growth. An EMSA

(electrophoretic mobility shift assay) could then be performed to confirm if Hox or Tbx proteins

bind to the Aqp9 promoter. If they do not appear to regulate Aqp9, then promoter bashing could

be performed to specifically identify which region of the Aqp9 gene promoter controls

transcription the most. The new region can be sequenced, matched to other proteins that regulate

limb patterning through databases such as BioGRID, and an EMSA can be repeated.

7.2 Histomorphometry of WT and Aqp9 -/- long bones

In this study, the long bone length comparisons of WT and Aqp9 -/- mice showed a differential

phenotype. The long bones were measured and superficially analyzed to suggest that

endochondral ossification occurs differently in the Aqp9 -/- mutants. However, the role of Aqp9

may go beyond bone length and also affect bone mineral density and structure. Liu et al. (2009)

show that one year old female Aqp9 -/- mouse bones do not significantly differ from that of WT

mice. Therefore, the contribution of Aqp9 to long bone characteristics at younger timepoints has

not been explored. To determine if Aqp9 affects bone in vivo, long bones can be isolated from

P5, P21, and one year old WT and Aqp9 -/- mice for histomorphometric analysis. Male mice can

be used exclusively to compare to the findings of Liu et al. (2009) and determine if Aqp9

functions in a sex-specific manner. Humerus, femur, and tibia bones can be dissected for micro-

CT analysis. Both trabecular and cortical bone characteristics can be analyzed for bone mineral

density and percent bone volume. The P5 and P21 skeletons stained in this study may be isolated

for this experiment, as the soft tissue has been removed and the fixation process is similar. In P5

Aqp9 -/- mice, their long bones may exhibit decreased bone mineral density as in Fgfr3 null mice

(Su et al., 2010). At P21, Aqp9 -/- long bones may also present with differential bone density,

although even Bmp2fl/fl; OSX-Cre mice—which would be expected to have defected

endochondral characteristics due to the importance of Bmp2—have comparable bone density to

WT control mice (McBride-Gagyi, McKenzie, Buettmann, Gardner, & Silva, 2015). Hence, any

differences observed may be minimal. In this study, the 18 month old mice Aqp9 -/- mice

exhibited an unusual narrowing of the epiphyseal plate. It is possible that in one year old mice,

the narrowing phenotype is also present and may be indicative of shorter bone length in

comparison to WT mice. Micro-CT or 3D skeletal reconstruction would identify the pertinent

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parameters of bones at this age which could be charted for comparison to the P5 and P21

characteristics. Overall, histomorphometric analysis of the long bones would provide deeper

insight into the endochondral characteristics of Aqp9 -/- mice beyond length. By analyzing long

bones from pups to old mice, the role that Aqp9 plays in murine skeletal development may be

better understood.

7.3 Flow cytometry cell cycle analysis

The cell proliferation experiment performed in this study revealed an irregular proliferation

phenotype among Aqp9 +/- and Aqp9 -/- chondrocytes. Chondrocytes were cultured and counted

at specific timepoints to measure their growth rate. However, the variance, weak statistical

power, and time consumption of the experiment design suggests that other methods can be

employed to accurately measure proliferation rates. To determine if Aqp9 affects the cell cycle

profile of epiphyseal plate chondrocytes, WT, Aqp9 +/-, and Apq9 -/- chondrocytes can be

isolated and subjected to flow cytometry cell cycle analysis. With flow cytometry, propidium

iodide can be used to bind DNA inside the chondrocyte samples and correlate with the amount

they contain. Therefore, the fluorescent intensity measures the number of cells at any one time

that are in each cell cycle phase. A high percentage of cells in the G2/M phase would suggest an

accelerated proliferation phenotype, as cells have just doubled their DNA content in the

preceding S phase. Initially, WT and Aqp9 -/- epiphyseal plate chondrocytes from P5 and P21

mice can be compared first. If they present with distinct cell cycle profiles, then Aqp9 +/-

chondrocytes can be checked as well to determine if heterozygous Aqp9 deletion has an

intermediary profile. Then, chondrocytes from embryonic and old age timepoints can be

harvested to compare profiles from development till adulthood. Chondrocytes can be sorted

according to their phenotype to ensure that only specific chondrocytes are analyzed. Belluoccio

et al. (2010) describe that the cluster of differentiation antigen CD200 is a cell surface marker

restricted to chondrocytes from the pre-hypertrophic and hypertrophic zones. If the analysis is to

be performed only on proliferating chondrocytes, the CD200-positive chondrocytes can be sorted

out. Furthermore, the cell proliferation experiment in this study showed accelerated proliferation

in Aqp9 mutant chondrocytes only between the 48-72 hour timepoints. If chondrocytes are

prepared and permeabilized for flow cytometry immediately after pronase/collagenase treatment,

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a distinct profile may not be observed. Samples can be cultured for 48 hours and then subjected

to the analysis. The analysis would determine whether the G2M:G1 ratios reflect the

proliferation phenotype observed among Aqp9 -/-chondrocytes.

7.4 RNA-sequencing of WT, Aqp9 +/-, and Aqp9 -/- primary

epiphyseal plate chondrocytes

In this study, the P5 Aqp9 -/- mice exhibited tibial overgrowth and the P21 Aqp9 -/- mice

exhibited femoral shortening. Furthermore, qPCR of P5 Aqp9 -/- epiphyseal plate chondrocytes

revealed a proliferation-leaning gene profile. To determine if Aqp9 functions in any pathways

affecting endochondral ossification, epiphyseal plate chondrocytes isolated in this study could be

RNA-sequenced to identify their gene expression both differentially and temporally. Additional

chondrocytes from different timepoints would also be required to assess expression throughout

endochondral ossification. WT, Aqp9 +/-, and Aqp9 -/- chondrocytes were investigated in this

study at the P5 timepoint through a cell proliferation assay, gene expression analysis, and Aqp9

silencing. While Mmp13 was significantly reduced and Sox9 was significantly increased in the

qPCR experiment among the mutant chondrocytes, siRNA knockdown of Aqp9 only showed a

gene expression trend without significance. Furthermore, the experiments were only performed

at one timepoint whereas Aqp9 deletion appears to affect skeletal stature differently depending

on age. By isolating WT, Aqp9 +/-, and Aqp9 -/- epiphyseal plate chondrocytes at E16.5 and P21,

their RNA could be sequenced alongside the P5 samples to show how the Aqp9 mutation may

affect pathways involving proliferation, hypertrophy, and ossification over time. At E16.5,

embryos have commenced with endochondral ossification for 5-6 days and would capture any

function of Aqp9 in early long bone development. At P21, mice are juvenile and would represent

any function of Aqp9 during early pubertal bone growth. The use of 5 biological replicates per

genotype and timepoint would improve the statistical power of the analysis. However, excision

of epiphyseal plate cartilage from embryos may be manually challenging due to size. To isolate

chondrocytes, whole embryo limbs may be roughly dissected and then digested prior to flow

cytometry sorting. The use of the aforementioned chondrocyte-associated antibodies would

improve the isolation of cells from only the developing limb buds. Altogether, RNA-seq of WT,

Aqp9 +/-, and Aqp9 -/- chondrocytes at the developmental, pup, and juvenile stages can establish

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how Aqp9 affects differential and temporal gene expression during endochondral ossification.

The RNA-seq may reveal a temporal method by which Aqp9 deletion influences chondrocyte

proliferation and hypertrophy. Disrupted pathways that link Aqp9 to bone defects may also be

identified. Validation of the RNA-seq output could be performed at the protein expression level

through Western blotting with antibodies for AQP9 and other markers differentially expressed.

The frozen P5 Aqp9 -/- epiphyseal plate chondrocyte protein samples saved in this study could

also be used for Western blotting, then compared to the biopsy blot results through band signal

quantification on ImageJ. In standard RNA-seq, all RNA submitted is ultimately reverse

transcribed into double stranded cDNA. However, this means that one of the cDNA strands

represents sense mRNA while the other cDNA strand represents antisense mRNA. Antisense

transcripts may be non-coding but play critical roles in transcriptome regulation (He, Vogelstein,

Velculescu, Papadopoulos, & Kinzler, 2008). With standard sequencing, the PCR amplification

step cannot differentiate between sense and antisense strands and devalues the output. This can

lead to an inaccurate representation of the transcriptome (Mills, Kawahara, & Janitz, 2013). As

Aqp9 deletion appears to relay subtle differences in endochondral ossification, a cleaner

transcriptome analysis may be required. Hence, creating a strand-specific cDNA library through

strand marking or using strand-specific RNA-seq should be considered.

7.5 Therapeutic strategies

The current treatment for LLDs are primarily limited to invasive surgical interventions. Aside

from resecting bone from the longer limb or applying a lengthening fixator to the shorter limb,

bone growth can be temporarily or permanently arrested through stapling the epiphyseal plate.

Epiphysiodesis is the process of guiding bone growth through inhibition of the epiphyseal plate

until a deformity has been corrected (Gottliebsen et al., 2013). Traditionally, stapling the plate

longitudinally prevents that area from ossifying properly and can be used to correct angular

deformities and LLDs (Blount & Clarke, 1949). Stapling is well-established and has been used

for many decades as a safe intervention for inhibiting growth (Raab, Wild, Seller, & Krauspe,

2001). This process has also been developed into tension band plating, where the staple is

replaced with a non-rigid plate-and-screw apparatus that better shifts epiphyseal load and

improves correction time (Stevens, 2007). Permanent epiphysiodesis can also be achieved

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through the archaic Phemister technique, where a portion containing epiphyseal plate and

surrounding bone are resected and reinserted into the joint with the ends reversed (Gottliebsen,

Shiguetomi-Medina, Rahbek, & Møller-Madsen, 2016). Nevertheless, the discovery of non-

invasive therapies has not been well-explored. Epiphysiodesis was achieved in rabbits through

radiofrequency delivery to their epiphyseal plates with minimal pain and postoperative

complication (Ghanem et al., 2009). Recombinant human BMP2 has also been used in

orthopedic settings to induce bone formation through biomaterial delivery (Wang et al., 1990;

Khan & Lane, 2004; Agrawal & Sinha, 2017). Consuming recombinant human growth hormone

can also rescue the effects of idiopathic short stature in children (Sotos & Tokar, 2014). As Aqp9

may be a negative regulator of long bone growth at the early stages of life, children diagnosed

with dysplasias may benefit from its targeted knockdown. Phloretin is a dihydrochalcone derived

from apples, known AQP9 inhibitor, and protector against osteoarthritis (Zheng, Chen, Zhang,

Cai, & Chen, 2018; Geng et al., 2017). Previously, the Kannu lab has shown that mice that

underwent a 60-day phloretin oral gavage treatment exhibited significantly reduced osteoarthritic

severity (Xie et al., 2017). However, the use of phloretin as an epiphyseal plate deliverable has

not been investigated. To test if Aqp9 can be ameliorated and affect endochondral ossification, a

fracture healing experiment can be performed in young mice using phloretin in the treatment

group. Radiography can be used to capture healing rates over a 60-day timespan. qPCR can be

performed on resected epiphyseal plates to measure chondrogenic, angiogenic, and osteogenic

gene expression. In this study, skeletal staining of Aqp9 -/- mice at P5 and P21 suggests that

phloretin would modulate the long bone growth rate.

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Appendix

Statement of Contributions

My supervisor—Dr. Peter Kannu—and my Program Advisory Committee members—Dr. Brian

Ciruna and Dr. Marco Magalhaes— contributed to the experimental design, data interpretation,

thesis revision, and approval. Liliana Vertel, Kashif Ahmed, Michael Liang, Raymond Poon,

Mushriq Al-Jazrawe, Qingxia Wei, and Chunying Yu contributed to the experimental design and

data interpretation. Dr. Eric Campos, William Scott, Stephanie Tran, Erin Chown, William Xie,

Lisa Vi, Marc Lawrence, Tarimobo Otobo, Archita Srinath, Carlos King, Anh Chu, and members

of the University of Toronto Collaborative Program in Musculoskeletal Science provided

supporting data interpretation and advice.

The Kannu lab and Alman lab organized all mouse cages and maintenance with The Centre for

Phenogenomics (TCP). Genotyping of weaned mice was performed by TCP and Transnetyx, Inc.

Liliana Vertel performed in situ hybridization. TCP employees performed H&E and Toluidine

blue staining. Marco Magalhaes performed H&E staining. Angela Weng performed

immunohistochemistry and Safranin-O staining. Kashif Ahmed assisted with cell culture

troubleshooting. Joseph Yang, Ziyi Shao, and members of the Alman lab performed qPCR and

RNA silencing. Additional dissection tools, reagents, and miscellaneous equipment were

provided by the Wall and Justice labs.

I contributed to the experimental design, genotyped all pups/neonatal mice, performed

superficial mouse measurements, performed skeletal staining, photographed and processed all

images, harvested whole knees and primary chondrocytes, performed cell culture, performed all

statistical analysis, interpreted data, hypothesized a working model, and wrote the thesis.

This study is funded by the Sickkids Restracomp Scholarship and the CIHR CGS-M Program.