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BIOPHYS: A Physically-based Algorithm for Inferring Continuous Fields of Vegetative Biophysical and Structural Parameters Forrest Hall 1 , Fred Huemmrich 1 , Derek Peddle 2,1 , David Landis 3 1 Joint Center for Earth Systems Technology (JCET) University of Maryland Baltimore County Code 923 NASA's Goddard Space Flight Center Greenbelt, MD 20771 [email protected] 2 Department of Geography The University of Lethbridge Lethbridge, Alberta, Canada 3 SSAI Lanham, MD MULTIPLE FORWARD MODE BIOPHYS uses MFM to achieve objectives of inversion modeling, BUT without explicit model inversion. Model is run multiple times in forward mode: Model range and increment step – Exact values are not required e.g. crown width: 0.5 - 4m (step: 0.5m) height: 5 - 20m (step: 1m) crown closure: 0 - 100% (step: 5%) Each run produces an output pixel reflectance value: T() Results stored in MFM Look-up Table (MFM-LUT) All structural inputs retained in MFM-LUT Match MFM-LUT T() values with actual satellite T() values FLOW DIAGRAM FOR BIOPHYS DATA PROCESSING ABSTRACT BIOPHYS is a physically-based algorithm presently being developed that uses radiative transfer modeling for inferring continuous fields of vegetative biophysical and structural parameters from MODIS data for input to surface/atmosphere carbon water and energy exchange models. Outputs consist of parameters such as leaf and canopy background optical properties, leaf area, branch area, crown shape, canopy cover, and vertical structure (canopy roughness), with appropriate error estimates. The algorithm requires no training data or classification, is well suited to multiple scenes and sensors with variable view and solar geometries, and produces a variety of biophysical/structural parameters over large areas. It has been validated and shown superior to other approaches for a variety of ecosystems, forestry parameters, sensors, and canopy optical models and is now being adapted for MODIS and NACP applications. APPROACH Canopy reflectance models provide the physical link between canopy characteristics and observed spectral reflectance. BIOPHYS uses an approach called multiple forward mode (MFM) modeling where canopy reflectance models calculate sets of reflectances using ranges of input structural values (billions of model runs are possible). Both the reflectance output and the biophysical-structural inputs to the canopy reflectance model are saved in a look-up table (LUT). Model inversion is simulated by searching the LUT for possible solutions that match the MODIS reflectances. The biophysical-structural input parameters from the model associated with each reflectance match provides the basis for inferring the continuous fields outputs. CANOPY REFLECTANCE MODELS Models that account for multiple scattering as well as shadowing by crowns are being used in BIOPHYS. Examples are GORT and GeoSail. Forest stands modeled as: • Geometric objects (tree crowns described by shape, height, width) Background surface (forest understory/ground) • Shadows Site description in model: Stand density Pixel size Terrain (slope, aspect) Sensor view angle (view zenith, azimuth angle to sun) Solar Zenith Angle Spectral properties: • Component endmembers (by species, per band ): sunlit canopy: c() sunlit background: b() shadow: A graphic interpretation of a MFM-LUT showing both biophysical values and errors. Average (left image) and coefficient of variation (right image) of LAI for July for 45º N latitude, x-axis is visible reflectance and y- axis is near IR reflectance, both from 0 to 0.30. The color in each grid represents the average or coefficient of variation of LAI values of all the model runs whose output reflectances fell within each 0.005 by 0.005 reflectance grid. 9.5 x 10 9 model runs were used. Using Multiple View/Sun Angles Red and near IR reflectances for spruce forest stands were calculated using GeoSail for multiple solar zenith angles (SZA). Canopy needle and branch LAI, coverage, and crown shape were varied resulting in 6930 runs for each SZA. A random model run was chosen as a target. For each SZA the model runs with reflectances within ±0.5% reflectance of the target were examined, also the runs that were selected for all SZA were determined. EXAMPLES LAI Look-up Tables Left, a graphic showing how multiple view/solar angles can be used in MFM. Top table on right is the number of model runs that were within ±0.5% reflectance of the target reflectance in both red and near IR bands. The lower table gives the average and standard deviation of the 13 model runs that were near the target reflectance for all SZA compared with the target values, showing good agreement. ADVANTAGES OF THIS APPROACH It provides a physical basis to biophysical parameter retrieval • Requires no training data • Provides an estimate of error • Takes advantage of different view and solar geometries • Accounts for differences in surface slope and aspect • Does not depend on image classification as a first step • Can be used to classify images • Can work with multiple sensors N Y N Y MODIS/MISR Landsat, Field Experiments Canopy Geometry Field Experiments Literature End-member or Canopy Element Reflectance s GORT Reflectance Model Field Experiments or Literature Sensitivity Analysis Error Models Prior Information on Landscape Structure in Global Biomes Stratification of Land Surface by Structural Elements Canopy Structural Elements Distributions Spectral Look Up Table Aerosol Retrieval TOA MODIS Data Atmospher ic Correctio n Multisour ce Data Spectral Degeneracy ? Multisource Algorithm Spectral Value in Table? Retrieve Continuous Field Values and Evaluate Errors Confide nce Interva ls Land Cover and Change SZA Numb er of Runs 40º 53 50º 63 60º 94 70º 138 Comb ined 13 Green Crow n LAI G reen Total LAI Branch LAI Canopy Cover H eight to W idth Target 5 .00 3.50 0 .75 0.70 8.00 Av g. 4 .69 3.21 0 .77 0.68 1 0.62 StD 1 .25 0.97 0 .19 0.04 3.86

BIOPHYS: A Physically-based Algorithm for Inferring Continuous Fields of Vegetative Biophysical and Structural Parameters Forrest Hall 1, Fred Huemmrich

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Page 1: BIOPHYS: A Physically-based Algorithm for Inferring Continuous Fields of Vegetative Biophysical and Structural Parameters Forrest Hall 1, Fred Huemmrich

BIOPHYS: A Physically-based Algorithm for Inferring Continuous

Fields of Vegetative Biophysical and Structural ParametersForrest Hall1, Fred Huemmrich1, Derek Peddle2,1, David Landis3

1 Joint Center for Earth Systems Technology (JCET)University of Maryland Baltimore County

Code 923NASA's Goddard Space Flight Center

Greenbelt, MD [email protected]

2 Department of GeographyThe University of LethbridgeLethbridge, Alberta, Canada

3 SSAILanham, MD

MULTIPLE FORWARD MODEBIOPHYS uses MFM to achieve objectives of inversion modeling, BUT without explicit model inversion.

Model is run multiple times in forward mode: Model range and increment step – Exact values are not required

e.g. crown width: 0.5 - 4m (step: 0.5m) height: 5 - 20m (step: 1m) crown closure: 0 - 100% (step: 5%)

Each run produces an output pixel reflectance value: T()

Results stored in MFM Look-up Table (MFM-LUT) All structural inputs retained in MFM-LUT

Match MFM-LUT T() values with actual satellite T() values

FLOW DIAGRAM FOR BIOPHYS DATA PROCESSING

ABSTRACTBIOPHYS is a physically-based algorithm presently being developed that uses radiative transfer modeling for inferring continuous fields of vegetative biophysical and structural parameters from MODIS data for input to surface/atmosphere carbon water and energy exchange models. Outputs consist of parameters such as leaf and canopy background optical properties, leaf area, branch area, crown shape, canopy cover, and vertical structure (canopy roughness), with appropriate error estimates. The algorithm requires no training data or classification, is well suited to multiple scenes and sensors with variable view and solar geometries, and produces a variety of biophysical/structural parameters over large areas. It has been validated and shown superior to other approaches for a variety of ecosystems, forestry parameters, sensors, and canopy optical models and is now being adapted for MODIS and NACP applications.

APPROACHCanopy reflectance models provide the physical link between canopy characteristics and observed spectral reflectance. BIOPHYS uses an approach called multiple forward mode (MFM) modeling where canopy reflectance models calculate sets of reflectances using ranges of input structural values (billions of model runs are possible). Both the reflectance output and the biophysical-structural inputs to the canopy reflectance model are saved in a look-up table (LUT). Model inversion is simulated by searching the LUT for possible solutions that match the MODIS reflectances. The biophysical-structural input parameters from the model associated with each reflectance match provides the basis for inferring the continuous fields outputs.

CANOPY REFLECTANCE MODELSModels that account for multiple scattering as well as shadowing by crowns are being used in BIOPHYS. Examples are GORT and GeoSail.

Forest stands modeled as:• Geometric objects (tree crowns described by shape, height,

width)• Background surface (forest understory/ground) • Shadows

Site description in model: • Stand density• Pixel size• Terrain (slope, aspect)• Sensor view angle (view zenith, azimuth angle to sun)• Solar Zenith Angle

Spectral properties:• Component endmembers (by species, per band ):

sunlit canopy: c()

sunlit background: b()

shadow: s()

• Multiple scattering within canopy affects reflectance of canopy (c()) and shadow (s())

endmembers

A graphic interpretation of a MFM-LUT showing both biophysical values and errors. Average (left image) and coefficient of variation (right image) of LAI for July for 45º N latitude, x-axis is visible reflectance and y-axis is near IR reflectance, both from 0 to 0.30. The color in each grid represents the average or coefficient of variation of LAI values of all the model runs whose output reflectances fell within each 0.005 by 0.005 reflectance grid. 9.5 x 109 model runs were used.

Using Multiple View/Sun AnglesRed and near IR reflectances for spruce forest stands were calculated using GeoSail for multiple solar zenith angles (SZA). Canopy needle and branch LAI, coverage, and crown shape were varied resulting in 6930 runs for each SZA. A random model run was chosen as a target. For each SZA the model runs with reflectances within ±0.5% reflectance of the target were examined, also the runs that were selected for all SZA were determined.

EXAMPLESLAI Look-up Tables

Left, a graphic showing how multiple view/solar angles can be used in MFM. Top table on right is the number of model runs that were within ±0.5% reflectance of the target reflectance in both red and near IR bands. The lower table gives the average and standard deviation of the 13 model runs that were near the target reflectance for all SZA compared with the target values, showing good agreement.

ADVANTAGES OF THIS APPROACH• It provides a physical basis to biophysical parameter retrieval• Requires no training data• Provides an estimate of error• Takes advantage of different view and solar geometries• Accounts for differences in surface slope and aspect• Does not depend on image classification as a first step• Can be used to classify images • Can work with multiple sensors

N

Y

N

Y

MODIS/MISRLandsat, Field Experiments

Canopy GeometryField Experiments

Literature

End-member orCanopy Element

Reflectances

GORT Reflectance

Model

Field Experimentsor

Literature

SensitivityAnalysis

Error Models

Prior Information onLandscape Structure

inGlobal Biomes

Stratification of Land Surface by Structural

Elements

Canopy StructuralElements

Distributions

Spectral Look UpTable

AerosolRetrieval

TOA MODIS Data

Atmospheric Correction

MultisourceData

SpectralDegeneracy?

MultisourceAlgorithm

Spectral Value in Table?

RetrieveContinuousField Values and Evaluate

Errors

Confidence

Intervals

Land Coverand Change

SZA Numberof Runs

40º 53

50º 63

60º 94

70º 138

Combined 13

GreenCrownLAI

GreenTotalLAI

BranchLAI

CanopyCover

HeighttoWidth

Target 5.00 3.50 0.75 0.70 8.00

Avg. 4.69 3.21 0.77 0.68 10.62

StD 1.25 0.97 0.19 0.04 3.86