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Bacterial Virulence Factors Dongwoo Shin Laboratory of Molecular Bacteriology Department of Molecular Cell Biology Sungkyunkwan University School of Me dicine

Bacterial Virulence Factors Dongwoo Shin Laboratory of Molecular Bacteriology Department of Molecular Cell Biology Sungkyunkwan University School of Medicine

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Page 1: Bacterial Virulence Factors Dongwoo Shin Laboratory of Molecular Bacteriology Department of Molecular Cell Biology Sungkyunkwan University School of Medicine

Bacterial Virulence Factors

Dongwoo Shin

Laboratory of Molecular BacteriologyDepartment of Molecular Cell Biology

Sungkyunkwan University School of Medicine

Page 2: Bacterial Virulence Factors Dongwoo Shin Laboratory of Molecular Bacteriology Department of Molecular Cell Biology Sungkyunkwan University School of Medicine

What is a pathogen?

-An organism capable of colonizing a host organism where the interaction results in disease

Bacteria and Disease

-opportunistic pathogens

-strict pathogens

Page 3: Bacterial Virulence Factors Dongwoo Shin Laboratory of Molecular Bacteriology Department of Molecular Cell Biology Sungkyunkwan University School of Medicine

Bacteria and Disease

Establishing connection: Koch’s Postulates

• Proving cause and effect in infectious disease research

-first raised in the 1800s by Robert Koch

• Koch’s postulates

-association of the bacteria with the lesions of the disease

-isolating the bacterium in pure culture

-showing that the isolated bacterium causes disease in humans or animals

-reisolating the bacterium from the intentionally infected animal

Page 4: Bacterial Virulence Factors Dongwoo Shin Laboratory of Molecular Bacteriology Department of Molecular Cell Biology Sungkyunkwan University School of Medicine

Bacteria and Disease

What is virulence (pathogenicity)?

-The capacity of a pathogen to cause damage or disease in the host

-Virulence factors: Cell wall components, DNA, Proteins

Page 5: Bacterial Virulence Factors Dongwoo Shin Laboratory of Molecular Bacteriology Department of Molecular Cell Biology Sungkyunkwan University School of Medicine

Bacteria and Disease

Virulence factors: Extracytoplasmic components

- Cell wall components: Teichoic (Lipoteichoic) acid, LPS

- Lipoproteins

- Capsule

- Pili

Page 6: Bacterial Virulence Factors Dongwoo Shin Laboratory of Molecular Bacteriology Department of Molecular Cell Biology Sungkyunkwan University School of Medicine

Bacteria and Disease

Virulence factors: Extracytoplasmic components

- Cell wall structure: Gram (+) bacteria

Page 7: Bacterial Virulence Factors Dongwoo Shin Laboratory of Molecular Bacteriology Department of Molecular Cell Biology Sungkyunkwan University School of Medicine

Bacteria and Disease

Virulence factors: Extracytoplasmic components

- Gram (+) bacteria cell wall: Teichoic acid (polymers of modified ribose or glycerol connected by phosphate

Page 8: Bacterial Virulence Factors Dongwoo Shin Laboratory of Molecular Bacteriology Department of Molecular Cell Biology Sungkyunkwan University School of Medicine

Bacteria and Disease

Virulence factors: Extracytoplasmic components

- Cell wall structure: Gram (-) bacteria

Page 9: Bacterial Virulence Factors Dongwoo Shin Laboratory of Molecular Bacteriology Department of Molecular Cell Biology Sungkyunkwan University School of Medicine

Lipopolysacchride (LPS)

-Somatic O polysacchride + Core polysaccharide + Lipid A

Bacteria and Disease

Page 10: Bacterial Virulence Factors Dongwoo Shin Laboratory of Molecular Bacteriology Department of Molecular Cell Biology Sungkyunkwan University School of Medicine

Bacteria and Disease

Virulence factors: Various proteins with different functions

Page 11: Bacterial Virulence Factors Dongwoo Shin Laboratory of Molecular Bacteriology Department of Molecular Cell Biology Sungkyunkwan University School of Medicine

Bacteria and Disease

Biology of Salmonella Infection

Page 12: Bacterial Virulence Factors Dongwoo Shin Laboratory of Molecular Bacteriology Department of Molecular Cell Biology Sungkyunkwan University School of Medicine

Bacteria and Disease

“Environmental Signals inside Host”

Expression of Necessary Proteins Expression of Necessary Proteins (Virulence Proteins) in the Correct Tissues(Virulence Proteins) in the Correct Tissues

Virulence Genes

Page 13: Bacterial Virulence Factors Dongwoo Shin Laboratory of Molecular Bacteriology Department of Molecular Cell Biology Sungkyunkwan University School of Medicine

Genetic screenings of bacterial virulence factors

1. Pre-genomic era: 1990’s

2. Post-genomic era: 21C

Page 14: Bacterial Virulence Factors Dongwoo Shin Laboratory of Molecular Bacteriology Department of Molecular Cell Biology Sungkyunkwan University School of Medicine

In Vivo Expression Technology (IVET)

1. Isolation of Salmonella genes whose expression is induced inside the host (i.e. genes whose products are necessary for host infection)

2. Auxotrophic selection method (Science, 1993) and Differential fluorescence induction method (Science, 1997)

Page 15: Bacterial Virulence Factors Dongwoo Shin Laboratory of Molecular Bacteriology Department of Molecular Cell Biology Sungkyunkwan University School of Medicine

Auxotrophic selection method

Step 1: Creating transcriptional fusions of random fragments of the Salmonella chromosome with a promoterless purA gene; introducti

on of this library into a purA mutant

a mutant that cannot synthesize purines (auxotroph)

Page 16: Bacterial Virulence Factors Dongwoo Shin Laboratory of Molecular Bacteriology Department of Molecular Cell Biology Sungkyunkwan University School of Medicine

Auxotrophic selection method

Step 2: Integration of a plasmid construct into chromosome of a purA

mutant via single crossover

Page 17: Bacterial Virulence Factors Dongwoo Shin Laboratory of Molecular Bacteriology Department of Molecular Cell Biology Sungkyunkwan University School of Medicine

Auxotrophic selection method

Step 3: Host infection with the pool of fusion strains and selection

X-gal plate

Page 18: Bacterial Virulence Factors Dongwoo Shin Laboratory of Molecular Bacteriology Department of Molecular Cell Biology Sungkyunkwan University School of Medicine

Differential fluorescence induction (DFI)

Rationale: trapping the gene promoters that are activated inside macrophages; using GFP

macrophage

Activation of mgtC transcription

Salmonella

PmgtC gfp

Page 19: Bacterial Virulence Factors Dongwoo Shin Laboratory of Molecular Bacteriology Department of Molecular Cell Biology Sungkyunkwan University School of Medicine

Differential fluorescence induction (DFI)

Step 1: Cloning of random fragments of Salmonella chromosome into a promoterless gfp plasmid; introduction of plasmids into Salmon

ella

Page 20: Bacterial Virulence Factors Dongwoo Shin Laboratory of Molecular Bacteriology Department of Molecular Cell Biology Sungkyunkwan University School of Medicine

Differential fluorescence induction (DFI)

Step 2: Infection of macrophages with Salmonella harboring gfp fusio

n plasmids; sorting GFP-active Salmonella with FACS

Page 21: Bacterial Virulence Factors Dongwoo Shin Laboratory of Molecular Bacteriology Department of Molecular Cell Biology Sungkyunkwan University School of Medicine

Validation of a screened candidate for virulence

1. In vitro method: Gentamicin protection assay for evaluations of Salmonella invasion into and survival within host cells

2. In vivo method: Animal experiments for evaluations of Salmonell

a’s ability to infect host

Page 22: Bacterial Virulence Factors Dongwoo Shin Laboratory of Molecular Bacteriology Department of Molecular Cell Biology Sungkyunkwan University School of Medicine

Validation of a screened candidate for virulence

- Gentamicin protection assay:

Infection of epithelial cells (e.g. Hep-2) or macrophages (e.g. J774.A)

with Salmonella

Incubation allowing for Salmonella to invade into epithelial cells or for

macrophages to engulf Salmonella (i.e. phagocytosis)

Gentamicin treatment to kill bacteria outside host cells

Detergent treatment to lyse host cells; plating onto agar plate to coun

t Salmonella

Page 23: Bacterial Virulence Factors Dongwoo Shin Laboratory of Molecular Bacteriology Department of Molecular Cell Biology Sungkyunkwan University School of Medicine

Validation of a screened candidate for virulence

- Gentamicin protection assay:

a mutant that cannot produce SPI-2 TTSS

Page 24: Bacterial Virulence Factors Dongwoo Shin Laboratory of Molecular Bacteriology Department of Molecular Cell Biology Sungkyunkwan University School of Medicine

Validation of a screened candidate for virulence

- Animal experiments: Mouse infection model

- Oral infection and Intraperitoneal infection

- Immunocompromised mouse and Immunocompetent mouse

Page 25: Bacterial Virulence Factors Dongwoo Shin Laboratory of Molecular Bacteriology Department of Molecular Cell Biology Sungkyunkwan University School of Medicine

Validation of a screened candidate for virulence

- Animal experiments:

Page 26: Bacterial Virulence Factors Dongwoo Shin Laboratory of Molecular Bacteriology Department of Molecular Cell Biology Sungkyunkwan University School of Medicine

Genetic screenings of bacterial virulence factors

1. Pre-genomic era: 1990’s

2. Post-genomic era: 21C

Page 27: Bacterial Virulence Factors Dongwoo Shin Laboratory of Molecular Bacteriology Department of Molecular Cell Biology Sungkyunkwan University School of Medicine

Announcement of Salmonella genome sequence: Nature (2000)

“Now, one can predict which genes are important for Salmonella virulence and experimentally test them.”

Page 28: Bacterial Virulence Factors Dongwoo Shin Laboratory of Molecular Bacteriology Department of Molecular Cell Biology Sungkyunkwan University School of Medicine

In this paper, the authors evaluated the role of every single transcription factor in Salmonella virulence

Page 29: Bacterial Virulence Factors Dongwoo Shin Laboratory of Molecular Bacteriology Department of Molecular Cell Biology Sungkyunkwan University School of Medicine
Page 30: Bacterial Virulence Factors Dongwoo Shin Laboratory of Molecular Bacteriology Department of Molecular Cell Biology Sungkyunkwan University School of Medicine
Page 31: Bacterial Virulence Factors Dongwoo Shin Laboratory of Molecular Bacteriology Department of Molecular Cell Biology Sungkyunkwan University School of Medicine

- A revolutionary method for construction gene deletion mutants in E. coli: PNAS (2000)

- Applicable to other enteric bacteria: Salmonella, Klebsiella, Yersinia, Enterobacter etc.

- Accurate, fast, and cheap method

Page 32: Bacterial Virulence Factors Dongwoo Shin Laboratory of Molecular Bacteriology Department of Molecular Cell Biology Sungkyunkwan University School of Medicine
Page 33: Bacterial Virulence Factors Dongwoo Shin Laboratory of Molecular Bacteriology Department of Molecular Cell Biology Sungkyunkwan University School of Medicine