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A Novel Wireless Ring-shaped Multi-site Pulse Oximeter Mémoire Alireza Avakh Kisomi Maîtrise en génie électrique Maître ès sciences (M.Sc.) Québec, Canada © Alireza Avakh Kisomi, 2017

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Page 1: A novel wireless ring-shaped multi-site pulse oximeter

A Novel Wireless Ring-shaped Multi-site Pulse

Oximeter

Mémoire

Alireza Avakh Kisomi

Maîtrise en génie électrique

Maître ès sciences (M.Sc.)

Québec, Canada

© Alireza Avakh Kisomi, 2017

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Résumé

Ces dernières années, la supervision continue des signes vitaux des patients a été un

sujet d'intérêt de plusieurs travaux de recherche surtout pour ceux qui souffrent de

maladies chroniques ou qui travaillent dans des environnements hasardeux. Dans la

pratique médicale moderne, le niveau d'oxygène dans le sang est un des signes vitaux

primaires tels que la pression artérielle, la fréquence cardiaque, la température

corporelle et le rythme respiratoire. L'oxymétrie de pouls est une technique populaire

non-intrusive qui permet de diagnostiquer des problèmes liés aux systèmes respiratoire

et circulatoire. Pour cette raison, elle est largement utilisée dans les soins intensifs, les

salles d'opération, les soins d'urgence, la naissance et l'accouchement, les soins

néonatals et pédiatriques, les études du sommeil et les soins vétérinaires. Or, pour

l’oxymètre de pouls, une acquisition précise des signaux est importante pour assurer la

fiabilité des mesures de la saturation d'oxygène artériel (SaO2). Dans ce cas, le

positionnement des capteurs joue un rôle important car la complexité de la structure du

tissu du doigt peut rendre l'effet de l'emplacement de la source lumineuse imprévisible

sur la mesure du SpO2. Si tel est le cas, un faible nombre de capteurs autour du doigt

pourrait perturber la trajectoire des rayons de lumière et corrompre les mesures. Les

oxymètres de pouls conventionnels utilisent une pince à doigts contenant les capteurs

qui utilise un seul ensemble de LED et photodétecteur (PD). En plus de l'inconvénient

des pinces à doigts, le placement du capteur n'est pas corrigé et sera affecté par des

artefacts de mouvement. Dans ce mémoire, nous présenterons un oxymètre qui utilise

six ensembles de diodes électroluminescentes et de photo-détecteurs, répartis

uniformément en anneau autour du doigt, ce qui permet d'identifier le meilleur chemin

de signal, immunisant ainsi l'acquisition du signal à l'effet de position de l'anneau. En

outre, pour éliminer les fils de la station de base, ce système utilise un émetteur-

récepteur radio ce qui supprime les inconvénients de l'attachement. Dans cette étude de

conception de preuve de concept, un prototype de cet oxymètre en anneau est réalisé

avec des composants commerciaux à faible consommation de courant et le tout est

montés sur une carte électronique flex-rigides qui communique avec un hôte distant par

un lien sans-fil pour traiter le signal et calculer le niveau d'oxygène.

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Abstract

Continuous health monitoring for patients with chronic diseases or people working in

high-risk environments has been an interesting topic of research in recent years. In

modern medical practice, the blood oxygen level is one of the vital signs of the body

alongside blood pressure, heart rate, body temperature, and breathing rate. Pulse

oximeters provide early information on problems in the respiratory and circulatory

systems. They are widely used in intensive care, operating rooms, emergency care, birth

and delivery, neonatal and pediatric care, sleep studies, and in veterinary care. Proper

signal acquisition in a pulse oximetry system is essential to monitor the arterial oxygen

saturation (SaO2). Since the tissue of finger has a complicated structure, and there is a

lack of detailed information on the effect of the light source and detector placement on

measuring SpO2, sensor placement plays an important role in this respect. Not enough

sensors placed around the finger will have an adverse effect on the light path so high

signal quality may become impossible to achieve. The conventional Pulse Oximeters

use a finger clip, which uses only one set of LEDs and photodetector (PD). In addition

to the inconvenience of the finger clips, the placement of the sensor is not fixed and will

be affected by motion artifacts. In this thesis, we present a ring-shaped oximeter that

uses six sets of light emitting diodes and photodetectors, uniformly distributed around

the finger to identify the best signal path, thus making the signal acquisition immune to

ring position on the finger. In addition, this system uses a radio transceiver to eliminate

the connection wires to a base station which removes the inconvenience of the tethering

and reduce the motion artifacts. In this proof of concept study, this novel ring oximeter

is implemented with commercial low power consumption off-the-shelf components

mounted on a rigid-flex board that connects to a remote host for signal processing and

oxygen level calculation.

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Table of content

Résumé ......................................................................................................................... iii

Abstract ........................................................................................................................ iv

List of Figures ............................................................................................................ viii

List of Tables ................................................................................................................ xi

List of Acronyms ........................................................................................................ xii

List of Symbols........................................................................................................... xiv

Acknowledgment ........................................................................................................ xv

1 Introduction ........................................................................................................... 2

1.1 Pulse Oximetry ................................................................................................ 3

1.2 Challenges in Pulse Oximetry Design ............................................................. 3

1.3 Goal of the Thesis ............................................................................................ 4

1.4 Contribution ..................................................................................................... 5

1.5 Structure of the Thesis ..................................................................................... 5

2 Literature Review on Pulse Oximetry Methods ................................................. 8

2.1 Introduction...................................................................................................... 8

2.2 Basics of Pulse Oximetry................................................................................. 9

2.2.1 Physiological Basics ................................................................................. 9

2.2.2 Photoplethysmography ........................................................................... 11

2.3 Methods for the Measurement of Oxygen Saturation.................................... 12

2.3.1 Light Absorbance Principles .................................................................. 12

2.3.2 Light Absorbance in Pulse Oximetry ..................................................... 13

2.3.3 Validity of Beer’s Law in Pulse Oximetry ............................................. 20

2.4 Pulse Oximetry Design Overview ................................................................. 21

2.4.1 LEDs and Photoreceptor ........................................................................ 21

2.4.2 Probes ..................................................................................................... 28

2.4.3 Front End Amplifier ............................................................................... 31

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2.4.4 Filters ...................................................................................................... 33

2.4.5 Signal Processing Unit ........................................................................... 36

2.5 Existing Challenges and Problems ................................................................ 37

2.5.1 Sources of errors ..................................................................................... 37

2.5.2 Challenges .............................................................................................. 47

3 Ring Shape Pulse Oximeter Design ................................................................... 51

3.1 Methodology .................................................................................................. 51

3.2 Principles of Proposed System ...................................................................... 53

3.3 Photosensor .................................................................................................... 54

3.4 Analog Front End .......................................................................................... 57

3.5 LED Driver .................................................................................................... 59

3.6 Multiplexers ................................................................................................... 60

3.7 Digital to Analog Converter .......................................................................... 61

3.8 Power Management Unit ............................................................................... 62

3.8.1 Battery .................................................................................................... 63

3.8.2 Low Drop-Out Regulator ....................................................................... 63

3.8.3 RLC Filter............................................................................................... 63

3.9 Microcontroller Unit ...................................................................................... 63

3.9.1 Analog to Digital Converter ................................................................... 64

3.9.2 UART ..................................................................................................... 64

3.9.3 SPI .......................................................................................................... 65

3.9.4 Programming .......................................................................................... 65

3.10 Transceiver .................................................................................................... 65

3.11 Rigid-Flex PCB Design ................................................................................. 66

3.12 Algorithm ....................................................................................................... 69

4 Experimental Results .......................................................................................... 72

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4.1 Quality of signal ............................................................................................ 72

4.2 Algorithm ....................................................................................................... 75

4.3 Power Consumption ...................................................................................... 77

5 Discussion and Conclusion ................................................................................. 79

References ................................................................................................................... 82

Appendix A: Ring Pulse Oximeter Microcontroller Code ..................................... 89

Appendix B: Ring Pulse Oximeter MATLAB Code ............................................. 110

Appendix C: Datasheets of the Components ......................................................... 124

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List of Figures

Figure 1 Oxygenated and deoxygenated hemoglobin molecules [5]. ............................ 9

Figure 2 two PPG signal measured by the proposed system. ....................................... 11

Figure 3 Beer’s law showing light absorption through a uniform substance [5]. ........ 12

Figure 4 Extinction coefficient of deoxygenated hemoglobin (Hb) and oxygenated

hemoglobin (HbO2) [5]. ............................................................................................... 14

Figure 5 Photoplethysmography signal acquired from a living tissue [5]. .................. 16

Figure 6 Beer's law in pulse oximetry [5]. ................................................................... 17

Figure 7 The calibration curves for a pulse oximeters [5]. .......................................... 18

Figure 8 A PPG waveform with its AC and DC [5]. .................................................... 19

Figure 9 Block diagram of a typical pulse oximeter system. The arrows show the flow

of data [5]. .................................................................................................................... 21

Figure 10 The mechanical design and distribution of optical components over the

flexible PCB: two photo-diode and four LEDs are mounted [23]. .............................. 24

Figure 11 Dislocation of ring sensors due to an external load. (a) Traditional single-

body design under external force. (b) New isolating ring sensor under external force

[28]. .............................................................................................................................. 24

Figure 12 Construction of isolating ring [28]. ............................................................. 25

Figure 13 Principle of reflection pulse oximetry illustrating the optical sensor and the

different layers of the skin [31]. ................................................................................... 25

Figure 14 Photo-diode performance under different conditions (a) Photo-diode output

in complete darkness and constant light illumination, (b) Calculated and measured

photo-diode output, (c) Photodiode output for Red and IR LED [32]. ........................ 26

Figure 15 Illustration of the developed electronic patch with ring shaped photodetector

[33]. .............................................................................................................................. 27

Figure 16 Prototype reflectance sensor configuration showing the relative positions of

the rectangular-shaped PDs and the LEDs [34]. .......................................................... 27

Figure 17 PPG signal amplitudes in different conditions [34]. ................................... 28

Figure 18 A transmittance probe on the left and a reflectance probe on the right. ...... 29

Figure 19 TIA topology based on an ideal op-amp [39]. ............................................ 32

Figure 20 The proposed trans impedance amplifier [24]. ........................................... 33

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Figure 21 Analog front end circuit with analog filters ................................................. 34

Figure 22 Two stage analog front end circuit ............................................................... 35

Figure 23 One stage analog front end circuit ............................................................... 36

Figure 24 Power consumption comparisons [28], [29]. ............................................... 38

Figure 25 Comparison of SpO2 recording from sensor location with annotated activities

[50]. .............................................................................................................................. 40

Figure 26 Patient with reflective PPG sensor sealed into an individually customized ear

mold. The reflective sensor element is placed at the inner tragus. The sensor is connected

to the sensor interface device via a cable which is taped for artifact reduction[51]. ... 41

Figure 27 Functional principle of the micro-optic sensor. Since it works in reflection

mode, special precautions for the avoidance of direct crosstalk from LED to p-i-n diode

have been taken [44]..................................................................................................... 42

Figure 28 Auditory canal sensor [37]. .......................................................................... 43

Figure 29 Contact lens probe [55]. ............................................................................... 44

Figure 30 3D model of the sensor mounted on an artery [59]. .................................... 46

Figure 31 Cross-sectional view of the sensor wrapped around a blood vessel. Both

stripes are fixed with ligature clips. The oxygen saturation is spectrometrically measured

by the transmitted intensity of two wavelengths [57]. ................................................. 46

Figure 32 Encapsulated silicone stripe with two embedded LEDs mounted onto a laser-

structured polyimide foil before covering with black colored silicone adhesive for

optical shielding [57]. ................................................................................................... 47

Figure 33 CAD drawing of a silicone stripe wrapped around a blood vessel acting as a

platform for various embedded sensors [60]. ............................................................... 47

Figure 34. Proximal phalanx structure [62].................................................................. 51

Figure 35 Preliminary acquired signal from around the proximal phalanx, (a) IR LED,

(b) red LED .................................................................................................................. 52

Figure 36 Block diagram of the proposed ring shaped pulse oximeter ........................ 54

Figure 37 LED and PD connection. ............................................................................. 56

Figure 38 Test prototype of the ring sensors. ............................................................... 57

Figure 39 One of the 6 sets of LEDs and PD inside the test prototype of the ring sensors.

...................................................................................................................................... 57

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Figure 40 AFE circuit with analog filters ..................................................................... 58

Figure 41 Two stages AFE circuit with digital feedforward ........................................ 59

Figure 42 LED driver with transistor ........................................................................... 59

Figure 43 LED driver circuit ........................................................................................ 60

Figure 44 Multiplexers circuit ...................................................................................... 61

Figure 45 Digital to Analog converter circuit .............................................................. 62

Figure 46 Power management unit circuitry ................................................................ 62

Figure 47 Microcontroller connections ........................................................................ 64

Figure 48 Microcontroller connector for programming ............................................... 65

Figure 49 Nordic transceiver connections and circuitry .............................................. 66

Figure 50 Test Setup Including Custom Prototyping Board, Microcontroller and Ring

Sensor ........................................................................................................................... 67

Figure 51 Designed rigid-flex PCB connections .......................................................... 67

Figure 52 3D presentation of the ring shaped sensor ................................................... 68

Figure 53 Top and bottom view of ring shaped sensor ................................................ 68

Figure 54 Flowchart of the algorithm........................................................................... 70

Figure 55 AC output of the red and IR LEDs .............................................................. 72

Figure 56 DC output signal of red and IR signal without tissue. ................................. 73

Figure 57 DC output signal of the red and the IR signals with the tissue. ................... 73

Figure 58 Output signal of the system based on the algorithm in a different position of

sensors. ......................................................................................................................... 76

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List of Tables

Table 1 Comparison between three pulse oximetry methods....................................... 31

Table 2 Results of testing different LEDs and PDs to choose the best set................... 55

Table 3 Oxygen level measurements with a commercial pulse oximeter .................... 74

Table 4 Oxygen level measurements with the proposed system .................................. 74

Table 5 Variance and standard deviation of oxygen level measurements ................... 75

Table 6 System characteristics ..................................................................................... 77

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List of Acronyms

AC Alternative Current

ADC Analog-to-Digital Converter

AFE Analog Front End

BW Bandwidth

CAD Computer-Aided Design

CMOS Complementary Metal Oxide Semiconductor

CO Carbon Monoxide

COHb Carboxyhemoglobin

DAC Digital-to-Analog Converter

DC Direct Current

ECG Electrocardiogram

GFSK Gaussian Frequency Shift Keying

Hb Hemoglobin

HbO2 Oxyhemoglobin

HPF High Pass Filter

IC Integrated Circuit

IO Input / Output

IR Infrared

ISM Industrial, Scientific, and Medical

LDO Low Drop-Out

LED Light Emitting Diode

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LPF Low Pass Filter

MCU Micro-Controller Unit

MEMS Microelectromechanical Systems

MetHb Methemoglobin

MOSFET Metal Oxide Semiconductor Field Effect Transistor

O2 Oxygen

PC Personal Computer

PCB Printed Circuit Board

PD Photodetector

PI Perfusion Index

PMU Power Management Unit

PPG Photoplethysmography

PSRR Power Supply Rejection Ratio

RF Radio Frequency

RLC Resistor (R), inductor (L), and capacitor (C)

SaO2 Arterial Oxygen Saturation

SNR Signal to Noise Ratio

SO2 Oxygen Saturation

SPI Serial Peripheral Interface

SpO2 Peripheral Oxygen Saturation

TIA Trans Impedance Amplifier

UART Universal Asynchronous Receiver/Transmitter

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List of Symbols

i Current

L Inductance

R Resistance

V Voltage

C Capacitance

ε(λ) Absorptivity (or Extinction Coefficient)

c Medium Specific Constant

𝐼0 Incident Light

I Transmitted Light

T Transmittance of Light

A Unscattered Absorbance

d Optical Path Length

R Ratio of Normalized Absorbance

k Constant

R Resistance

V Voltage

I Current

A Gain

⁰ Degree

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Acknowledgment

This thesis is dedicated to my family who always loved and supported me. Also, I want

to thank my dear friends who supported me during my Master’s in Canada which was a

new section of my life.

Many thanks to my supervisor, Prof. Benoit Gosselin, for his help to complete this

degree, a young, brilliant, dedicated professor and head of the Bio-Microsystem’s

Laboratory at Laval University. I learned a lot from his collaboration. Also, I would like

to thank my co-supervisors, Prof. Amine Miled and Prof. Mounir Boukadoum for

helping and guiding me to reach my potentials.

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Chapter One

Introduction

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1 Introduction

Continuous health monitoring for patients with chronic diseases or people working in

high-risk environments has been an interesting topic of research in recent years [1]. In

modern medical practice, the blood oxygen level has been considered as one of the

important signs of the body functionality along with the traditional ones, such as heart

rate, glucose level, blood pressure, breathing rate and body temperature. Pulse

oximeters provide early information on problems in the respiratory and circulatory

systems. They are widely used in intensive care, operating rooms, emergency care, birth

and delivery, neonatal and pediatric care, sleep studies, and in veterinary care [2]–[4].

All these capabilities are because of the possibility of reducing the sensor size and

electronic circuits and modern techniques of communication.

In modern medicine, pulse oximetry devices are ubiquitous for measuring the

percentage of oxygenated hemoglobin in blood by comparing the transmission or

reflection characteristics of two different wavelengths (red and infrared) of light passing

through the patient’s body with a photoreceptor.

Lots of designs have been presented up to now and each one has its own advantages and

disadvantages. Some papers talk about the methods of reducing power consumption,

some try to receive better accuracy, some are trying to minimize the dimension of the

sensors and some are trying to introduce new and more effective methods to measure

the oxygen level and have better processing of the signals. Also, there are some articles

talking about using the invasive method to have better and more accurate signals without

any environmental bad effects.

There are different aspects in designing a pulse oximeter which should be considered,

including power consumption, sensor size, and its comfortability, finding the best site

to put a sensor or the best method of LED configuration and motion artifacts. All of

them can be considered as a challenge for a designer. In addition, some researchers are

looking for methods to have a good implantable system, which has its own advantages

and difficulties.

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In this thesis, we will have a total review of different part of a pulse oximetry system

and the operation of the whole system. Also, we will talk about the problems which a

designer should handle to have a better result. All parts of this review are prepared based

on papers, application notes, and online information.

1.1 Pulse Oximetry

Pulse oximetry is a non-invasive method to measure the oxygen level of blood. This

method is based on the photoplethysmography (PPG) signal, which contains

information related to the blood and its components. The term of PPG refers to an optical

and low-cost method to obtain the pulsatile signals demonstrating the volume change of

blood in the tissue. PPG signals will be acquired by non-invasive methods to make the

measurements on the surface of the skin. The PPG signals is a combination of two

signals, AC and DC. The pulsatile (AC) component is caused by changes in blood

volume which are synchronous with heartbeats. The non-pulsatile (DC) component with

low-frequency components is caused by respiration, sympathetic nervous system

activity, and thermoregulation. These changes in volume are detected by illuminating

the skin surface with light sources (light emitting diode) and then measuring the

reflected or transmitted light to a photoreceptor. The PPG waveform will vary in

different subjects, locations, and different manners that the signal is acquired. Since the

blood flow can be modulated with different physiological systems, the PPG signal can

demonstrate hypovolemia, breathing, and other circulatory conditions. In pulse

oximetry method, PPG signals in two different wavelengths are measured and by

comparing these two signals valuable information can be obtained. Two different

wavelengths of light by two LEDs are sent through the tissue and the received light by

a photodetector contains the required information. The received light by the

photodetector is a combination of DC and AC signals. Based on Beer-Lambert’s law

about light absorption, the ratio of these two components of the received light are used

to measure the oxygen level of the blood.

1.2 Challenges in Pulse Oximetry Design

Although the design of a pulse oximeter has a simple base and it is possible to design a

test pulse oximeter prototype with simple components, to have a working commercial

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pulse oximeter implies lots of challenges and limitations. One of the first challenges that

we were facing was the size of the system. Since this design was going to be a ring shape

pulse oximeter the size and placement of the components were vital and it led to a rigid-

flex PCB design, which has all the required parts to have a wireless low power pulse

oximetry system. The other important aspect is designing the wireless system because

tethering the pulse oximeter creates some problems like producing more motion artifacts

and uncomfortable attachment of the sensors to patients. This wireless system has the

possibility of measuring and analyzing the acquired pulse oximetry signals. Also, a

separate base station like a mobile phone or computer can be used to do further

processing, data saving and displaying the final results. Battery size and its power

consumption can be considered as another challenge, which should be taken care of it.

Normally most of the power consumption of a pulse oximeter is in the LED driving

system, which should be managed to have a minimum power consumption so that it is

possible to have small size batteries.

1.3 Goal of the Thesis

In this thesis, we try to design and build a device to measure the heart beat and oxygen

level of the blood. Basically, we aim to design a wireless pulse oximeter that is capable

of, measuring the oxygen level using light emitting diodes and recording the

photoplethysmography responses. By the term “wireless pulse oximeter”, we mean a

light-weight device that is not tethered to any other devices or power source. Also, we

tried to use the components with lowest power consumption. Although the power

consumption is managed to be as low as possible regarding the available off the shelf

components, because of using discrete LEDs the power consumption is not minimum.

To achieve this goal custom designed LEDs should be used. The pulse oximeter will

have embedded optical stimulating and recording circuitry and will be capable of

sending the recording signals back to a base station computer in real-time.

We have tried to make this pulse oximetry tool performance as close as possible to the

commercial products. In order to do so, along with a complete literature review on the

subject, we worked with a local company (Oxy'nov Inc.) specialized in innovative

medical devices for patients requiring respiratory care. Thanks to this collaboration, we

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gathered a set of realistic criteria that were deemed desirable for this type of research

tool.

The mentioned characteristics include being wireless, lightweight and having multiple

stimulations and recording sensors to increase signal coverage. These characteristics

make the pulse oximetry tool suitable for long term (several hours) monitoring of

patients with smaller errors caused by motion artifacts.

1.4 Contribution

The design of the wireless pulse oximeter (this work) is based on the experience

acquired during the design of proof-of-concept version with limited capabilities. At all

stages of the design process of the new pulse oximeter, Alireza Avakh Kisomi (author

of this thesis) worked alone on the project. This work presents the design process of a

pulse oximetry system that is capable of measuring oxygen level and heart rate using

light emitting diodes and photodetectors, which is practical to use in intensive care,

operating rooms, emergency care, birth and delivery, neonatal and pediatric care, sleep

studies, and in veterinary care. The advantage of this design is replacing finger clip

sensors with a ring shaped designed sensors, which provides better signal coverage

because of multi-site measurement. Also, this wireless design removes the tethering that

causes measurement errors and inconvenience for patients.

The results of this project have been published at two conferences. The first one is a

conference paper titled “A Novel Wireless Ring-shaped Multi-site Pulse Oximeter” and

it was published in IEEE International Symposium on Circuits and Systems (ISCAS)

Montreal, Canada, 2016. The second paper is titled “A Multi-Wavelength Spectroscopy

Platform for Whole Blood Characterization and Analysis” and was published in IEEE

Engineering in Medicine and Biology Society (EMBC), Florida, USA, 2016. Also,

another paper focusing on the multisite sensors and intelligent algorithm of the system

is planned to be submitted to a journal.

1.5 Structure of the Thesis

This multidisciplinary thesis is devoted to the design and manufacturing of a low-power,

multisite, ring shaped and wireless impedance spectroscopy platform capable of being

used for patients with chronic diseases.

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Chapter 2 of this thesis is assigned to the literature review and understanding the basics

of pulse oximetry systems. In this chapter, the physiological basis of pulse oximetry and

photoplethysmography is explained. Then different measurement methods of oxygen

saturation, essential system parts in a pulse oximeter and existing challenges are

discussed.

Chapter 3 presents the explanation about the methodology of the whole system design.

This section talks about the preliminary tests that led to designing such a system and the

general idea of the multi-site pulse oximeter. In addition, the proposed system is

explained in this chapter.

Chapter 4 has been assigned to system design of the pulse oximetry and explanations

about all the analog and digital circuits that are used in this system. The proposed multi-

site ring shape pulse oximeter is explained in detail.

Chapter 5 presents the measured results of this research project, discusses the system

performance and shows the realized pulse oximeter in detail. The physical design of the

pulse oximeter is also discussed in this chapter.

Finally, in chapter 6, the conclusion of this thesis is presented followed by the references

and the appendices.

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Chapter Two

Literature Review on

Pulse Oximetry Methods

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2 Literature Review on Pulse Oximetry Methods

2.1 Introduction

Pulse oximetry is a fast, non-invasive, and common method for monitoring the oxygen

saturation of patient’s blood. It was introduced in 1983 [5] and therefore is considered

a newcomer in the world of medicine. Nevertheless, it is a very important vital sign of

a patient in modern medical practice along with the more traditional ones, such as blood

pressure, glucose level, heart rate, body temperature, and electrocardiogram (ECG)

signal.

The respiratory and circulatory systems are required to deliver oxygen to the cells. The

first step is ventilation so that air moves in and out of the lungs to exchange gas. Oxygen

is diffused into the blood, while carbon dioxide diffuses into the lungs. The oxygenated

blood circulates in the body to diffuse the oxygen to cells, and carbon dioxide is

transferred to the blood that is returning to the lungs.

Pulse oximetry tries to find the possible problems in the process of transporting oxygen

to the tissues. Those problems may arise because of improper gas mixtures, inadequate

ventilation or diffusion, blocked airways or hoses, poor circulation, etc [5]. The most

frequent use of pulse oximetry, where it is recognized worldwide as the standard of care,

is in anesthesiology.

Since anesthesiologists administer narcotics to the patients to suppress the central

nervous system, tissue oxygenation and, consequently, blood saturation has extreme

importance to them. This stops the patient’s desire to breathe and places them in a state

where they can no longer meet oxygen demands on their own. In addition,

anesthesiologists administer muscle relaxants, which stop the ability to breathe and

permits airways to collapse. Thus, it is necessary to restore breathing through intubation

and artificial respiration.

In a sense, the anesthesiologist controls for the patient’s respiratory system, and the

blood oxygen level provides the best feedback variable. In response to an oxygenation

problem, anesthesiologists can check for cyanosis or monitor blood pressure, ECG, and

heart rate: however, they all indicate problems long after oxygen declines. Blood gas

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samples give an accurate measurement of oxygen, but take about 5 minutes to process.

Therefore, pulse oximetry has literally revolutionized the field of anesthesiology as a

non-invasive, fast, easy-to-use, continuous, and affordable monitoring device [6].

2.2 Basics of Pulse Oximetry

2.2.1 Physiological Basics

Gasses are not solvable in blood because it is mostly made out of the water, and this

prevents plasma to carry oxygen effectively in the body. Therefore, hemoglobin is an

extremely important compound in the body to help plasma to be able to carry oxygen.

In fact, hemoglobin helps plasma to be 65 times more effective in the transportation of

oxygen.

Nearly 265 million molecules of hemoglobin, respiratory pigments, are in each red

blood cell [5]. Hemoglobin is made out of four heme units and four globin units. Each

base unit of hemoglobin can transport one molecule of oxygen. Accordingly, as shown

in Figure 1 [5], four molecules of oxygen can be transferred by one hemoglobin

molecule.

Figure 1 Oxygenated and deoxygenated hemoglobin molecules [5].

Hemoglobin, as a respiratory pigment, has different colors based on whether it carries

oxygen or not. Hemoglobin becomes dark red when it is oxygenated because it absorbs

most of the red light beams hitting it. On the other hand, deoxygenated hemoglobin

becomes light red as a result of transmitting most of the red light beams. Henceforth,

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pulse oximetry uses this feature to measure the oxygen saturation of hemoglobin [7],

[8].

In other words, if we shine red light onto blood, we can estimate the level of oxygen by

measuring the rate of red light transmission and comparing that with a reference value.

Therefore, Infrared (IR) light can be used as a reference value because it has

approximately the same transmission rate for both oxygenated and deoxygenated

hemoglobin molecules [9]–[11].

Furthermore, this way of measuring oxygen helps us to defer arterial blood from venous

blood and other body tissues such as bone and skin pigmentation. In fact, arterial blood

pulsatile characteristic affects the waveform of reflected light signal that is different

from the reflection of non-pulsatile venous blood and other tissues. Therefore, one of

the main advantages of pulse oximeter over other kinds of oximeters is that it does not

need absolute calibration regarding the total absorbance of tissue. We will express these

statements in the form of mathematical formulas later which can help understanding the

concept better.

Regarding other methods of oximetry, some methods consider the partial pressure of

oxygen (PO2) while some consider oxygen saturation (So2). Some of these methods

function outside of the body while some others function inside the body. Moreover,

from the operation perspective, some of them perform based on chemical operations

while the operation is optical in others. In chemical methods, the oxygen level in blood

is measured by using chemical reactions to extract the oxygen from a sample of the

blood. Chemical methods such as the galvanic electrode [12], Van Slyke method [13],

the Clark electrode [12], and mixing syringe method [13] tend to be slow.

The first mass-produced CO-oximeter was released in 1966 by Instrumentation

Laboratories Inc. [14] and the employed technique of CO-oximeter was based on

spectrophotometry which is fundamental for all optical oximetry methods. The method

examines the concentration of different kinds of hemoglobin including oxyhemoglobin

(HbO2), reduced hemoglobin (Hb) and carboxyhemoglobin (COHb). In Co-oximeter,

discrete samples are drawn in vitros and examination will be held on the samples. Co-

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oximeter is one the most accurate method although the accuracy is at the time of drawing

samples and not all the time [12]. Other optical oximeters have also been used before.

2.2.2 Photoplethysmography

Photoplethysmography (PPG) points to an optical approach that is cost effective for

acquiring the pulsatile signal that demonstrates the variation of blood volume in tissue.

Non-invasive methods can measure the PPG signals on skin surface [15], [16].

The PPG signals consist of AC and DC signals. Volume change of blood results in

pulsatile (AC) component, synchronous with heartbeats. The low-frequency non-

pulsatile (DC) part is originated from thermoregulation, respiration, and sympathetic

nervous system functions. These components present invaluable information about the

body cardiovascular system, however, the basis of them are not fully known [15]. These

volume changes are determined by illuminating the skin surface with emitting diode

source and computing the reflected or transmitted light to the photoreceptor. The

acquired PPG signal will alter in different matters, locations, and manners. Various

physiological systems can modulate the blood flow, hence the PPG signal can illustrate

hypovolemia, breathing, and other circulatory conditions [17]. Figure 2 shows two

different PPG signals that are measured by the proposed system of this thesis.

Figure 2 two PPG signal measured by the proposed system.

Recently a demand for portable, cost efficient, and easy to use technology for clinical

setup and primary care got great attention. The obtainable low cost and light weight

components and available advanced computer based signal analysis are the aspects that

should be studied to meet the requisition. There is a broad span of products from medical

instruments companies that apply PPG technique to evaluate blood pressure, cardiac

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output, peripheral vascular-related disorders, oxygen saturation, and autonomic

function[15].

One of the important variables that should be calculated from PPG is Perfusion Index

(PI). Perfusion index is the ratio of the pulsatile component (AC) to the non-pulsatile

static component (DC) in the blood passing through the patient's peripheral tissue [18].

Perfusion index acts as an indicator of the pulse strength at the sensor site. The PI's

values vary from 0.02% for very weak pulse to 20% for extremely strong pulse [19].

The PI should be used as a tool for optimal placement of the sensor, not as an indicator

for accurate SpO2 [20].

2.3 Methods for the Measurement of Oxygen Saturation

2.3.1 Light Absorbance Principles

This section explains the significant physical theorems that underlie the pulse oximeter

operation by studying the fundamentals of light absorption in materials.

Beer-Lambert’s or Bouguer’s law defines the attenuation of monochromatic light

proceeding in through a homogenous medium consisting of absorbing substance. Figure

3 demonstrates the traveling of monochromatic incident light through matter and its

exponential intensity decrease with distance by its partial absorption.

Figure 3 Beer’s law showing light absorption through a uniform substance [5].

𝐼 = 𝐼0𝑒−𝜀(𝜆)𝑐𝑑 (2.1)

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where, 𝜀(𝜆) stands for the absorptivity (or extinction coefficient) of the material at a

particular wavelength. c is a medium specific constant parameter representing the

absorbing substance concentration, and d is the optical path length through the matter.

The concentration, c, is normally measured in 𝑚𝑚𝑜𝑙𝐿−1, and the extinction coefficient

is expressed in 𝐿𝑚𝑚𝑜𝑙−1𝑐𝑚−1.

In each single material, the atoms of all molecules oscillate in definite patterns. The

frequencies of light passing through a medium that are close to the vibrational

frequencies of the substance are absorbed. The unique spectrum corresponding to each

substance could be graphed by extinction coefficient at different wavelengths.

Other essential terms to be defined are transmittance (T) of light as the ratio of

transmitted light (I) to the incident light (𝐼0)

𝑇 = 𝐼

𝐼0= 𝑒−𝜀(𝜆)𝑐𝑑 (2.2)

and unscattered absorbance (A) as the negative natural logarithm of the light

transmittance.

𝐴 = − ln 𝑇 = 𝜀(𝜆)𝑐𝑑 (2.3)

The superposition property of Beer's law lets the principle of substance absorption in

medium valid for more than one substance such that the total absorption 𝐴𝑡 is calculated

by adding each substance contribution independently (superposition).

𝐴𝑡 = 𝜀1(𝜆)𝑐1𝑑1 + 𝜀2(𝜆)𝑐2𝑑2 +⋯+ 𝜀𝑛(𝜆)𝑐𝑛𝑑𝑛 = ∑ 𝜀𝑖(𝜆)𝑐𝑖𝑑𝑖𝑛𝑖=1 (2.4)

where 𝜀𝑖(𝜆), 𝑐𝑖 and 𝑑𝑖 are the extinction coefficient, concentration, and optical path

length through the matter, respectively. Hence, the concentration of different absorbing

substances in a uniform medium could be found out when the extinction coefficients of

the substances are known and the absorbance of light is measured at n various

wavelengths.

2.3.2 Light Absorbance in Pulse Oximetry

In order to illustrate the blood oxygen saturation phenomena, the basics of light

absorbance measurement in pulse oximetry are described in this section.

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The main element present in human blood which absorbs light at the same wavelengths

as pulse oximetry is Hemoglobin. Depending on the wavelength of the incident light

and its chemical binding, Hemoglobin may behave differently when absorbing light. In

a healthy adult, functional Hemoglobin, namely oxygenated (𝐻𝑏𝑂2) and reduced

hemoglobin (𝐻𝑏) is the most common type of Hemoglobin in blood. The percentage of

oxygen saturation (𝑆𝑂2) can be stated as:

𝑆𝑂2 =𝐻𝑏𝑂2

𝐻𝑏+ 𝐻𝑏𝑂2=

𝐶𝐻𝑏𝑂2

𝐶𝐻𝑏+ 𝐶𝐻𝑏𝑂2 (2.5)

Using equation (2.5), the relation between the concentration of Hb and 𝐻𝑏𝑂2, and

oxygen saturation (𝑆𝑂2) can be displayed accordingly.

Figure 4 Extinction coefficient of deoxygenated hemoglobin (Hb) and oxygenated hemoglobin (HbO2)

[5].

𝐶𝐻𝑏𝑂2 = 𝑆𝑂2 × (𝐶𝐻𝑏 + 𝐶𝐻𝑏𝑂2) , 𝐶𝐻𝑏 = (1 − 𝑆𝑂2) × (𝐶𝐻𝑏 + 𝐶𝐻𝑏𝑂2) (2.6)

The arterial blood’s saturation is constant throughout the arterial system. The oxygen

saturation of arterial blood is termed as SaO2, which has a normal operating range above

90% for a healthy adult.

The extinction coefficients of reduced hemoglobin (Hb) and oxyhemoglobin (HbO2) at

the wavelengths in the desired range for pulse oximetry [9], [21], [22] are depicted in

Figure 4. More previously mentioned, the red region of the spectrum for Hb shows

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significantly higher light absorbance than HbO2. Both Hemoglobin types indicate the

same extinction coefficients at the 805 nm point. However, the transparency of Hb to

light from the infrared (IR) region is somewhat higher than HbO2.

In pulse oximetry, the most preferred wavelengths are 660 nm for red and 940 for

infrared. One of the major reasons for such choice is that light absorption varies

considerably at 660 nm due to the large variation of extinction coefficients of Hb and

HbO2. This holds even when having slight variations of oxygen saturation. Another

reason could be the availability of LEDs in the mentioned wavelengths that contribute

to more cost effective commercial oximeters. Another reason that is worth mentioning

is the better robustness achieved in such wavelengths as shifts in the peak wavelength

of the LEDs caused by temperature or fabrication (a variation of ±15 nm is typical) will

not lead to huge errors thanks to the flatness of absorption spectra in the neighborhood

of selected wavelengths.

The total light absorption of the blood can be achieved based on Beer’s Law

(considering d as the same optical path length for Hb and HbO2):

𝐴𝑡 = 𝜀𝐻𝑏𝑂2(𝜆)𝑐𝐻𝑏𝑂2𝑑𝐻𝑏𝑂2 + 𝜀𝐻𝑏(𝜆)𝑐𝐻𝑏𝑑𝐻𝑏 (2.6) →

𝐴𝑡 = [𝜀𝐻𝑏𝑂2(𝜆) × 𝑆𝑂2 + 𝜀𝐻𝑏(𝜆) × (1 − 𝑆𝑂2)](𝐶𝐻𝑏 + 𝐶𝐻𝑏𝑂2)𝑑 (2.7)

Several elements may absorb light when passing through the biological tissue, e.g.

finger or earlobe. Among all the different absorbers, skin pigmentations, bones, and the

arterial and venous blood are the main ones that absorb light in the desired region. The

light absorption and transmission of a living tissue in time are illustrated in Figure 5.

Since the light absorption amount and arterial blood pulsation are related (Figure 5),

pulse oximeters can benefit from arterial pulsation.

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Figure 5 Photoplethysmography signal acquired from a living tissue [5].

To illustrate, the diameter of arteries enlarges with the raising of the amount of pressure

as more blood is carried during systole than diastole. Such phenomena, however, is

specific to arteries only. During systole, the light absorption in tissue with arteries boosts

as optical path length d in arteries enlarges thanks to the presence of more absorbing

substances (Hemoglobin). Such variation in total absorption eases distinguishing

between the absorption caused by venous blood, a constant amount of arterial blood,

and other non-pulsatile parts like skin pigmentation (DC component of the total

absorbance) and the absorption caused by the pulsatile part of the arterial blood (AC

component). The AC component of the light absorption is usually no more than 0.5-2%

of the DC component. The transmitted light’s signal which changes in time is known as

the plethysmography (or photoplethysmography) signal [1], [9], [10], [15], [23], [24].

As Figure 5 and Figure 6 denote since the diameter of arterial vessels are minimal (𝑑𝑚𝑖𝑛)

during diastole, the absorbance of arterial hemoglobin is also minimal with a peak in

transmitted light.

𝐼𝐻 = 𝐼0𝑒𝑥𝑝 [−𝜀𝐷𝐶𝑐𝐷𝐶𝑑𝐷𝐶] × exp [−(𝜀𝐻𝑏𝑐𝐻𝑏 + 𝜀𝐻𝑏𝑂2𝑐𝐻𝑏𝑂2)𝑑𝑚𝑖𝑛] (2.8)

𝜀𝐷𝐶(𝜆), 𝑐𝐷𝐶 and 𝑑𝐷𝐶 represent the DC light absorbers from the pulsating arterial blood

vessels. The diameter of arterial vessels grows to its maximum during the systole while

the transmitted light also reaches a low peak (𝐼𝐿). The maximum diameter is represented

by (𝑑𝑚𝑎𝑥)

𝐼𝐿 = 𝐼0𝑒𝑥𝑝 [−𝜀𝐷𝐶𝑐𝐷𝐶𝑑𝐷𝐶] × exp [−(𝜀𝐻𝑏𝑐𝐻𝑏 + 𝜀𝐻𝑏𝑂2𝑐𝐻𝑏𝑂2)𝑑𝑚𝑎𝑥] (2.9)

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The aforementioned properties are illustrated in Figure 6. In different wavelengths,

LEDs emit different intensities or may have a different sensitivity or absorbing

characteristics of the DC components. With this regard, in order to compare the light

intensities of different wavelengths, we first have to normalize the measured quantities.

By normalizing 𝐼𝐿 with respect to 𝐼𝐻, we get ∆𝑑 = 𝑑𝑚𝑎𝑥 − 𝑑𝑚𝑖𝑛

𝐼𝐿

𝐼𝐻= exp [−(𝜀𝐻𝑏𝑐𝐻𝑏 + 𝜀𝐻𝑏𝑂2𝑐𝐻𝑏𝑂2)∆𝑑] (2.10)

Figure 6 Beer's law in pulse oximetry [5].

We calculate the natural logarithm of the normalized signal as equation (2.10) shows to

find the total absorbance of the AC component in the light pathway. The new constant

light level and the ratio, R, of these normalized absorbance is represented by the

transmitted light during diastole. The absorbance is considered in the red and IR

wavelengths and shows the light absorbers in the arteries.

𝑅 =𝐴𝑡,𝑅

𝐴𝑡,𝐼𝑅=

−ln (𝐼𝐿,𝑅/𝐼𝐻,𝑅)

−ln (𝐼𝐿,𝐼𝑅/𝐼𝐻,𝐼𝑅)

(2.10) → 𝑅 =

(𝜀𝐻𝑏(𝜆𝑅)𝑐𝐻𝑏+𝜀𝐻𝑏𝑂2(𝜆𝑅)𝑐𝐻𝑏𝑂2)∆𝑑𝑅

(𝜀𝐻𝑏(𝜆𝐼𝑅)𝑐𝐻𝑏+𝜀𝐻𝑏𝑂2(𝜆𝐼𝑅)𝑐𝐻𝑏𝑂2)∆𝑑𝐼𝑅 (2.11)

Here we assume that the optical path lengths are the same for the red and infrared lights.

The ratio of normalized absorbance R is then calculated as follows

(2.11) (2.6) → 𝑅 =

[𝜀𝐻𝑏(𝜆𝑅)(1−𝑆𝑂2)+𝑐𝐻𝑏𝑂2(𝜆𝑅)𝑆𝑂2](𝑐𝐻𝑏+𝜀𝐻𝑏𝑂2)

[𝜀𝐻𝑏(𝜆𝐼𝑅)(1−𝑆𝑂2)+𝑐𝐻𝑏𝑂2(𝜆𝐼𝑅)𝑆𝑂2](𝑐𝐻𝑏+𝜀𝐻𝑏𝑂2)

→ 𝑅 =𝜀𝐻𝑏(𝜆𝑅)+[𝑐𝐻𝑏𝑂2(𝜆𝑅)−𝜀𝐻𝑏(𝜆𝑅)]𝑆𝑂2

𝜀𝐻𝑏(𝜆𝐼𝑅)+[𝑐𝐻𝑏𝑂2(𝜆𝐼𝑅)−𝜀𝐻𝑏(𝜆𝐼𝑅)]𝑆𝑂2 (2.12)

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It is worth mentioning that R is independent of the optical length (diameter of the blood

vessels), the intensity of the incident light and the constant amount of light absorption

by certain parts of the tissue.

Lastly, we have an equation, (2.12), which is formed to calculate the blood oxygen

saturation (𝑆𝑂2) by the measured R.

𝑆𝑂2 =𝜀𝐻𝑏(𝜆𝑅)−𝜀𝐻𝑏(𝜆𝐼𝑅)𝑅

𝜀𝐻𝑏(𝜆𝑅)−𝜀𝐻𝑏𝑂2(𝜆𝑅)+[𝜀𝐻𝑏𝑂2(𝜆𝐼𝑅)−𝜀𝐻𝑏(𝜆𝐼𝑅)]𝑅× 100% (2.13)

To illustrate, the oxygen saturation of the arterial blood (𝑆𝑎𝑂2) can be assessed using

the R of equation (2.13) and the extinction coefficients of Figure 4.

𝑆𝑂2 =0.81−0.18𝑅

0.73+0.11𝑅× 100% (2.14)

Figure 7 illustrates the correlation of parameters from the calibration.

Figure 7 The calibration curves for a pulse oximeters [5].

As discussed earlier, we find the minimum and maximum values of the light intensities

of red and IR wavelengths (𝐼𝐿,𝑅, 𝐼𝐻,𝑅, 𝐼𝐿,𝐼𝑅, 𝐼𝐻,𝐼𝑅), find the minimum over maximum ratio

and calculate the logarithm of the ratio is counted as R as shown in equation 2.15

𝑅 =𝐴𝑡,𝑅

𝐴𝑡,𝐼𝑅=

−ln (𝐼𝐿,𝑅/𝐼𝐻,𝑅)

−ln (𝐼𝐿,𝐼𝑅/𝐼𝐻,𝐼𝑅) (2.15)

We then normally use the calculated calibration curves to calculate the oxygen

saturation from R.

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However, we will show in this section that we can approximate this standard calculation

method and extract R by means of using the AC and DC components of the transmitted

light signals [5], instead of looking at their minimum and maximum values. Figure 8

illustrates the AC and DC components of a typical waveform of the transmitted light

intensity through a tissue.

Figure 8 A PPG waveform with its AC and DC [5].

We have decomposed and approximated the maximum (peak) and minimum (valley)

values of this signal as:

𝐼𝐷𝐶 =𝐼𝐻+𝐼𝐿

2 , 𝑖𝑎𝑐 = 𝐼𝐻 − 𝐼𝐿 ⇒ 𝐼𝐿 = 𝐼𝐷𝐶 −

𝑖𝑎𝑐

2 , 𝐼𝐻 = 𝐼𝐷𝐶 +

𝑖𝑎𝑐

2 (2.16)

Then, we have used the natural logarithm of 𝐼𝐿

𝐼𝐻 according to the standard approach to

calculate R as follows:

ln (𝐼𝐿

𝐼𝐻) = ln (

𝐼𝐷𝐶−𝑖𝑎𝑐/2

𝐼𝐷𝐶+𝑖𝑎𝑐/2) = ln (

1−𝑖𝑎𝑐/2𝐼𝐷𝐶

1+𝑖𝑎𝑐/2𝐼𝐷𝐶) (2.17)

Since the time-varying (ac) component of the transmitted light signal through the human

tissue does not exceed 0.5-2% of its average, we can approximate x as

𝑥=𝑖𝑎𝑐2𝐼𝐷𝐶

,|𝑥|≪1

→ ln (𝐼𝐿

𝐼𝐻) = ln (

1−𝑥

1+𝑥) ≃ ln(1 − 𝑥)2 = 2 ln(1 − 𝑥) ≃ −2𝑥 = −

𝑖𝑎𝑐

𝐼𝐷𝐶 (2.18)

The error in the approximation above is negligible, even in the very improbable case of

𝑖𝑎𝑐

𝐼𝐷𝐶= 5%, which will cause an error of 0.02. Now, R can be obtained as

𝑅 =𝐴𝑡,𝑅

𝐴𝑡,𝐼𝑅=

ln (𝐼𝐿,𝑅/𝐼𝐻,𝑅)

ln (𝐼𝐿,𝐼𝑅/𝐼𝐻,𝐼𝑅)=

𝑖𝑎𝑐,𝑅/𝐼𝐷𝐶,𝑅

𝑖𝑎𝑐,𝐼𝑅/𝐼𝐷𝐶,𝐼𝑅 (2.19)

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2.3.3 Validity of Beer’s Law in Pulse Oximetry

Beer’s law physically states that the sum of transmitted and absorbed light signals is

equal to the incident light signal. However, incident light passing through a human tissue

does not split solely into absorbed and transmitted portions; there are parts of the light

that are reflected at the surface or scattered in the human tissue. Beer’s law does take

such parts into account [5].

Although the scattering phenomenon highly increases the absorbance of light, the

arterial oxygen saturation level of the blood can still be read by pulse oximeters with

enough accuracy for clinical use under normal circumstances. This capability comes

from the fact that most of the commercial pulse oximeters use a calibration curve which

is obtained based on empirical data, mainly because mathematical modeling of the light

scattering problem under different conditions in a complex medium such as human body

presents a lot of complications. This calibration is performed using in vitro data. A large

set of data is gathered containing information about the ratio R between the normalized

absorbance calculated by the pulse oximeter (obtained in clinical studies) and the actual

arterial oxygen saturation 𝑆𝑎𝑂2 obtained by the CO-oximeter, which is a very accurate

measurement method. The reader can look up tables or equations that are used to find

the relationship between the two above-mentioned variables for a pulse oximeter

reading.

As an example, equation (2.14) which is a theoretical calibration curve obtained based

on Beer’s law can be modified to [25]

𝑆𝑝𝑂2 =𝑘1−𝑘2𝑅

𝑘3−𝑘4𝑅 (2.20)

where 𝑆𝑝𝑂2 is the saturation of the arterial oxygen measured using the pulse oximeter.

The constants used in equation (2.20) are determined through clinical studies in order

for the curve to acquire a best fit into the in vitro measured data. Polynomial expressions

are frequently used as empirical calibration curves as well, as follows

𝑆𝑝𝑂2 = 𝑘1 + 𝑘2𝑅 + 𝑘3𝑅2 𝑜𝑟 𝑆𝑝𝑂2 = 𝑘1 + 𝑘2𝑅 (2.21)

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Figure 7 demonstrates a representative 2nd-order polynomial calibration curve employed

in pulse oximeters. A 1st-order polynomial of the form

𝑆𝑝𝑂2 = 110 − 25 × 𝑅 (2.22)

is suggested in the literature [5] as well, as a possible simple approximation for the

calibration curve.

In general, obtaining the correlation between various pulse oximeter measurements

(𝑆𝑝𝑂2) is sufficient if proper initial calibration is performed. Usually, less than 3%

discrepancy will be observed provided that 𝑆𝑎𝑂2 is above 70% [26], [27].

2.4 Pulse Oximetry Design Overview

The block diagram of a typical pulse oximeter system is illustrated in Figure 9 [5]. As

we see in this figure, a microprocessor system is the core of the pulse oximeter and,

thus, most of the signal processing is performed in the digital domain. This section gives

a brief description of the major parts of a pulse oximeter.

Figure 9 Block diagram of a typical pulse oximeter system. The arrows show the flow of data [5].

2.4.1 LEDs and Photoreceptor

In order to make pulse oximetry practical in the modern medical environment, a light

source is required that is powerful enough to penetrate more than a centimeter of tissue

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yet diminutive enough to fit in a small probe. It is also desirable for the light source at

each desired wavelength to have a very narrow emission spectrum, which minimizes

error in the measurement of blood oxygen saturation. Fortunately, light-emitting diodes

(LEDs) fulfill all the requirements for the light source in a pulse oximeter.

Indeed, one of the improvements of the pulse oximeter over earlier oximeter is the use

of LEDs as the light source. The LEDs transmit large intensities of light proportional to

the amount of drive current. The LED control block in Figure 9 controls the timing of

the LEDs and, in some advanced pulse oximeters, the amount of drive current. The

timing of the pulsations is critical because the photodiode cannot distinguish between

different wavelengths of light. The pulse oximeter relies on the microprocessor system

to synchronize the pulsation of the LEDs with the samples taken by an analog-to-digital

converter (ADC) so that the absorbance detected by the photodiode can be attributed to

the correct LED.

Normally, a 660 nm red LED and a 940 nm IR LED are used in pulse oximetry, for

reasons described before. The typical radiated power of these two LEDs is 1 mW at

about 20 mA of DC drive current. LEDs normally are not very efficient, meaning that

the majority of the power dissipated by an LED becomes heat. LED power consumption

is, in fact, an important consideration since it normally constitutes a large portion of the

overall power requirement of the sensor. While most of the pulse oximeters are used in

a stationary clinical environment where power is readily available from the nearest wall

outlet, some are portable units used in a variety of emergency medical situations or

continuous home monitoring. It is therefore essential that LED power dissipation be

minimized while still providing adequate radiated power for pulse oximetry.

To minimize the number of wires in each probe (and hence cost), the LEDs are wired in

a parallel arrangement with polarities reversed, as shown in Figure 9. This means that

while one LED is ON, the other one is under reversed bias. The typical LED has a

reverse breakdown voltage (3-5 V) that is larger than the forward voltage of most LEDs

(0.9-2.5 V). Thereby, there is no danger of breaking down the LEDs in this arrangement.

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The other important practical consideration is that LED drive signals are usually pulsed

(chopped). This is mainly to save power dissipation of LEDs. The duty cycle of the

pulse varies between 1.5-50% depending on the manufacturer of the oximeter.

Most LEDs have an ON-OFF (or vice versa) switching time of about 100-500 ns which

is much faster than their drive chopping frequency (typically in the 0.1-10 kHz range).

On the other hand, the photodetector is the main input device of the pulse oximeter

system (light sensor) and is normally a silicon photodiode. The use of a single

photodiode guarantees that the optical path for both the red and IR light is the same

which is an important condition for proper calculation of oxygen saturation. When the

p-n photodiode is used in the photoconductive mode, a highly linear relationship exists

between the intensity of incident light and the output photocurrent over a span of up to

7 decades. The sensitivity, however, varies significantly with incident light wavelength.

The spectral response is determined by the material and the doping used for fabrication

and the physical depth of the p-n junction. Therefore, it is important to make sure that

the photodiode works properly with the wavelengths of interest to pulse oximetry. When

selecting a photodiode, other properties such as junction capacitance and dark current

also need to be considered.

The configuration of the LEDs and photodetector can be changed based on the place

where the sensors will be used for data acquisition. The transmission mode is very

suitable for thin part of the body like finger, earlobe, and feet (for infants), which the

light can travel through the tissue and be received on the other side. For this method, a

clip to hold the sensors or ring shape sensors are used. Now we introduce some of the

LED and photodetector sensor designs presented in different systems and articles.

In [23], another ring shape sensor is presented. As it is claimed by the author, in the

design of this ring three main aspects have been considered including the comfort for

the user, optical properties and safety issues. This ring can be opened during placement

operation and then can be locked by pulling a band after placing. Also, two series of

LEDs and photoreceptor have been used. The design is shown in Figure 10.

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Figure 10 The mechanical design and distribution of optical components over the flexible PCB: two

photo-diode and four LEDs are mounted [23].

In the reflection mode, although the quality of the signal is lower, we can have the

sensors in every part of the body because both LEDs and photoreceptors are on the same

side which means there is no need to use on thin parts of the body.

In [28]–[30], a ring shape sensor is proposed which contains an outer ring covering an

inner ring, as shown in Figure 11 and Figure 12. The LEDs and photoreceptor are placed

on the inner ring and the outer ring is for coating, and as it is claimed, this structure will

reduce the external pressure on the ring and will prevent dislocation of LEDs and

photoreceptor, so it can be very reliable against motion artifact. Also, because of the

coating, the ambient light has low effect on the signals.

Figure 11 Dislocation of ring sensors due to an external load. (a) Traditional single-body design under

external force. (b) New isolating ring sensor under external force [28].

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Figure 12 Construction of isolating ring [28].

In [31], the sensors are used in reflection mode and the backscattered signal from the

surface of the skin is measured, as shown in Figure 13. It is shown that the pulsatile

component of the signal can be amplified by heating the area of the skin. Furthermore,

to achieve better signal to noise ratio (SNR), the active area of the photoreceptor has

been increased. Also, optimizing the distance between the LEDs and the photoreceptor

will improve the SNR.

Figure 13 Principle of reflection pulse oximetry illustrating the optical sensor and the different layers of

the skin [31].

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In [32], the sensors are in reflection mode, and the diode size has been considered to

reduce the overall power consumption. This paper talks about the advantages which

were achieved by using a photoreceptor with the larger active area. The results are

presented in Figure 14.

(a)

(b)

(c)

Figure 14 Photo-diode performance under different conditions (a) Photo-diode output in complete

darkness and constant light illumination, (b) Calculated and measured photo-diode output, (c)

Photodiode output for Red and IR LED [32].

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In the experiments, it has been demonstrated that by increasing the area of the

photoreceptor, it is possible to reduce the overall power requirement.

One of the other ways to increase the area of the photoreceptor is to use a ring shape

photoreceptor introduced in [33]. In this work, as it is shown in Figure 15, a ring shaped

photodiode has been developed for a wearable reflection pulse oximeter. For continues

measurement of signals of a human body, a temperature sensor has been integrated into

the chip containing the photodiode.

Figure 15 Illustration of the developed electronic patch with ring shaped photodetector [33].

In [34], the potential of power saving in the design has been considered. Also, the

differences between the signals of wrist and forehead have been studied. A new design,

Figure 16, for sensors is presented which consists of two LEDs as light sources and two

series of six photoreceptors that each series of detectors are arranged in two circular

configurations around the LEDs called inner and outer sensors.

Figure 16 Prototype reflectance sensor configuration showing the relative positions of the rectangular-

shaped PDs and the LEDs [34].

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During measurements, the signals are acquired from near (N), far (F) and the

combination of near and far (N+F) photoreceptors. The PPG signals have been measured

for two different LED current ((a) R: 8.5 mA and (b) IR: 4.21 mA).

Figure 17 PPG signal amplitudes in different conditions [34].

As we can see, near sensors have a better signal level in comparison to far sensors but

the total signal of both near and far is stronger. Also, we can obtain stronger signals

from the forehead.

2.4.2 Probes

The probe of a pulse oximeter typically consists of the two (red and IR) LEDs and the

photodiode. There are two different types of probes, transmittance and reflectance,

which are shown in Figure 18. As the names indicate, a transmittance pulse oximeter

measures the amount of light that passes through the tissue, as in a finger probe, to

measure the arterial oxygen saturation. A reflectance pulse oximeter measures the

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29

amount of light reflected back to the probe. Both types use the same technology,

differing only in relative positioning of the LEDs and the photodiode.

Figure 18 A transmittance probe on the left and a reflectance probe on the right.

In transmittance probes, the photodiode is placed in line with and facing the LEDs. The

trade-off between the applied pressure to the tissue and the detected light determines the

distance between the detector and the LEDs. If this distance is too large, the amount of

transmitted light decreases, as it is seen from Beer’s law. If it is too small, the force

exerted by the probe is significant and the blood under the tissue, where the probe is

placed, may clot due to external pressure applied. In a clip type probe, this distance is

usually between 10-15 mm [5]. Normally, transmittance probes are placed on the

patient’s finger, toe, ear, or nose in adults or on the foot or palms in the infants. One

important biological reason behind the selection of these body locations for the probing

is that the body will decrease blood flow to these parts before more vital organs, so the

physician can take notice of a problem in the oxygen delivery system before it is too

late.

The idea of using light reflection instead of light transmission in oximetry was first

described in [35]. In reflectance probes, the LEDs and the photodiode are placed on the

same side of the skin surface, as displayed in Figure 18. Normally, these types of probes

are placed on the forehead or temple where there are large and smooth bones under the

skin which can reflect a large amount of LED light.

Studies have been performed to compare these two types of probes and optimize their

design to enhance the performance of a pulse oximeter [34], [36]. However, it is known

that, in general, the basic advantage of transmittance probes over their reflectance

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counterparts is the intensity of the light detected by the photodiode. As the amount of

light passing through thin tissue is greater than the amount of light reflected and as the

light passing through the tissue is concentrated in a particular area whereas the reflected

light is usually distributed over a relatively large area surrounding the LEDs, the

intensity of detected light is larger for transmittance probes. Consequently, having fixed

all the other parameters, a transmittance pulse oximeter often performs more accurately

and robustly than a reflectance oximeter. The major disadvantage of transmittance

probes is that the sensor application is limited to the peripheral parts of the body such

as the finger. Reflectance probes can be placed on virtually any place on the body where

we can expect light reflection due to tissue.

Some of the pulse oximeter probes are reusable, while some are disposable. The main

advantage of the reusable probes is the low per use cost involved because we use the

same probe over and over. However, reusable sensors require cleaning between patients

to minimize the risk of cross contamination.

In addition to the mentioned signal acquisition modes, there is another light path which

was proposed in [37], [38] that should be used in auditory canal and the expression

“Circummission pulse oximetry” was suggested for it. In this method, the optoelectronic

components face outside the canal and away from each other, using a semi-circle path

for light to travel through the tissue.

The best operation of a pulse oximeter is the time when all the light passes through the

tissue. However, because of the wrong size of the probe, not applying the probe in the

right way or misalignment of the sensors, some part of the light passes by the side of the

artery (shunting). This reduces the strength of the signal and causes some error in the

pulse oximeter’s results.

The shunt light level is high in reflection mode and it will be decreased by using the

transmission mode. Based on [37], [38], the shunt level is decreased by using the

presented method in their papers. Table 1 shows a comparison between the 3 mentioned

methods, [37]. As it is shown, the quality of the signal is good in circummission method

but the placement of the sensor is limited to the auditory canal and it will make this

method not practical for other parts of the body.

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Table 1 Comparison between three pulse oximetry methods.

Method Reflectance Transmission Circummission

Sensor

Available Site Any well-perfused

skin

Finger, toe, foot(just for

newborn babies) Auditory Canal

Signal Quality Weak signal quality Excellent signal quality Good signal quality

Shunt Light High shunt level Few shunt level Smallest shunt level

Disadvantages Unreliable SaO2

Motion sensitivity Motion sensitivity

High light level required

because of long path

2.4.3 Front End Amplifier

One of the most important parts of a pulse oximetry system is the transimpedance

amplifier (TIA) which affects the whole system noise sensitivity and speed. The main

role of this part of the system is to convert the current, produced by the photodetector,

to voltage. Different topologies for TIA have been proposed up to now. The most

popular topology is the shunt feedback which is a voltage inverting amplifier and a

feedback resistor. The feedback resistor affects the dynamic range of the TIA that is

defined as the ratio of maximum to minimum photocurrent which can be properly

sensed[39]. A good TIA should have a good performance against the noise which means

a good signal to noise ratio (SNR), it should also have small input impedance. Figure

19 shows a conventional TIA topology which uses an ideal op-amp [39].

The photodetector is modeled as a current source which is parallel with a capacitance.

And a resistor is used in the feedback loop, which determines the gain of the amplifier.

The output gain is,

𝑉𝑂𝑈𝑇 = 𝐼𝐼𝑁𝑅𝐹 → 𝐺𝑎𝑖𝑛 =

𝑉𝑂𝑈𝑇

𝐼𝐼𝑁= 𝑅𝐹 (2.23)

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-A

IIN CD

VoutPD

RF

Figure 19 TIA topology based on an ideal op-amp [39].

In this circuit, it is considered that the whole current passes through the feedback resistor

and it means that the input current of the amplifier should be very small so that it could

be ignored.

The research in the field of TIA can be categorized into three groups. First, the papers

that are using a precise amplifier with a resistor as a feedback loop, so there is no design

of TIA. A shunt feedback resistor with an amplifier is used and the operation of the TIA

is based on the design of the op-amp. In these cases, the op-amp should have a very high

gain and very small input current noise.

Second, the TIA design for photoplethysmography signals. These designs are very

suitable for different current and frequency ranges used in PPG signals but there is a

problem that the DC part of the signal is rejected and there should be some modification

in these circuits because for measuring the oxygen level the ratio of DC and AC is

required. These circuits should be designed in a way that makes the measurement of the

DC component possible. In other words, after separating the AC and DC instead of

rejecting the DC it can be measured to do the calculation [40]–[42].

Third, the high-frequency TIA designs that the current range is completely different

from the desired frequency for pulse oximetry, for example, the maximum input current

is 1 mA that is not practical to be used for pulse oximeters [39].

For the shunt-feedback TIA amplifiers, a large feedback resistor is used in order to

minimize its contribution to the input referred noise current achieving a good noise

performance.

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33

𝑖𝑛𝑜𝑖𝑠𝑒,𝑅𝐹 =4𝑘𝐵𝑇

𝑅𝐹 (2.24)

Then, a high open-loop inverting amplifier gain A is required to provide enough

bandwidth (BW) [1].

𝐵𝑊 ∝𝐴

𝑅𝐹𝐶𝐷 with 𝐴 ≫ 1 (2.25)

In [24], as shown in Figure 20, an innovative design is proposed which uses a MOSFET

as a feedback loop. The advantage of this design is that the output of the TIA has a direct

relation with the ratio of AD and DC component of the signal. Also, a three stage

amplifier with controllable gain is used to have an overall gain for the TIA. In this

design, the power consumption of the whole system is also reduced.

A

Q

II CD

Vout

VDD

Figure 20 The proposed trans impedance amplifier [24].

2.4.4 Filters

Filter circuits in an analog front end can be considered as the most important parts, since

they are used to remove noise, and separating DC and AC components. Based on the

signal acquisition method and the quality of the signal, different types of filters can be

used in the analog front end including low pass filters (LPF), high pass filters (HPF) and

notch filters.

LPF is used to remove high-frequency noises in the environment which can be caused

by many different reasons and have various types. Also one of the conventional types

of noise is 60 Hz (or 50 Hz) noise, which is made by the local power line frequency. In

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some cases, using a notch filter is the best way to eliminate this type of noise. Moreover,

DC and AC components of the signal should be separated in some systems, and an HPF

filter can be the solution to remove the DC components. At the end of the AFE circuit,

an amplifier stage can be used to set the level of the signal to a suitable value for ADC.

These amplifiers should be low power and low noise and in some designs, the amplifiers

can be an LPF too.

Although there should be some filters to remove the noise to have a clear signal, the

existing noise can be decreased by some post-processing algorithms in the

microcontroller unit. In [2], a small size and low-cost pulse oximeter appropriate for

wearable applications is presented that produces unfiltered PPGs ideal for emerging

diagnostic algorithms. This design is distinguishable from conventional systems

because of its filter free embodiment which employs only digital subtraction on the

signal as a signal compensation mechanism [2].

Figure 21 Analog front end circuit with analog filters

Based on the type of filtering different circuitry can be proposed to be used as the AFE.

The analog front end is designed for amplification, conversion, filtering, and separation

of the signal components. One approach is to separate the AC and DC signal after the

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TIA and after the separation, the signal will be sent to the AFE which reduces the tasks

in the digital processing part.

Figure 21 shows a fully analog circuit that was used to separate AC and DC signals. In

this circuit, two low pass and high pass Sallen-key filter were used to do the signal

separation [43].

Another circuit that can be used as the AFE is presented in Figure 22. In the first stage,

the output current of PD which is in the range of µA passes through the TIA and converts

to voltage. A capacitor is in parallel with the resistor to make a low pass filter for the

first stage of the AFE. After this stage, the signal goes through two different paths, one

goes to the second stage for more amplification and separation and one goes to the ADC

of the microcontroller. The signal that goes into the ADC passes through a digital low

pass filter to calculate the DC amount. Then a DAC generates the same value for the

second stage as a reference. The negative port of the amplifier in the second stage has

both AC and DC components of the signal but the positive port just has the DC

component. So the second amplifier acts as signal separator and in the output has the

AC signal which is also amplified too. Then this signal goes to the ADC for

measurements and is used for the final calculation. Also, the same as the first stage, in

the second stage there is a capacitor in parallel with resistor to make a low pass filter

[44].

Figure 22 Two stage analog front end circuit

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The other circuit that can be used as the AFE has a simpler circuitry which makes the

analog part simpler but puts more burden on the digital processing section [45]. This

circuitry is presented in Figure 23. As it is shown this circuitry is a simple TIA which

after converting the PD current to voltage the signal will be sent to the ADC for further

processing which includes filtering and separating the AC and DC signals.

Figure 23 One stage analog front end circuit

2.4.5 Signal Processing Unit

This unit receives the photocurrent from the photodiode and computes the oxygen

saturation (𝑆𝑝𝑂2) at its output. In state-of-the-art commercial pulse oximeters, the front-

end of this processing unit is a linear current-to-voltage converter (usually a classic

transimpedance amplifier). Since the change in voltage due to the pulsations of the

arteries is small (0.5-2%) in comparison to the DC portion of the signal, careful

consideration should be incorporated into the design so that the unit can handle this

small AC signal.

As seen in the system of Figure 9, the amplifier is followed by a demodulator to separate

the signals from the red and IR LEDs. After each of these signals passes through a filter

(to remove the switching frequency and noise) and a gain stage, a modulator modulates

the red and IR signals back together to go through an ADC for use by the

microprocessor. Using this data, the microprocessor calculates IL/IH for each red and

IR signal and after that the ratio of normalized absorbance R. Then, based on its

programmed calibration curve, it derives 𝑆𝑝𝑂2. There are also some signal processing

algorithms to provide noise reduction. The microprocessor also controls the timing

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between the different blocks. Alarms (if any) and display exist to convey the blood

oxygen saturation level and often the pulse rate to the user.

2.5 Existing Challenges and Problems

Under normal circumstances, the pulse oximeter measurement (𝑆𝑝𝑂2) is generally a

reliable indicative of the blood oxygen saturation of the patient. However, as part of our

general introduction to pulse oximetry so far presented in this chapter, it is also

important to briefly discuss sources of inaccuracy in pulse oximeters. Recognizing the

limitations described in this section and applying appropriate corrective interventions

are necessary to optimize the use of pulse oximetry.

2.5.1 Sources of errors

2.5.1.1 Motion Artifact

As with most medical devices, motion artifacts can contribute a significant error to pulse

oximetry. Any transient motion of the sensor relative to the skin may cause a large

artifact in the transmitted light signal and disturb the optical measurement. Some

manufacturers use digital signal processing (like averaging the SpO2 values) or

synchronize the measurements with the patient’s electrocardiogram (ECG) to improve

the performance of their sensors under movements. As we will explain in the next

chapter, we perform our measurements based on simultaneously-detected red and IR

light waveforms. Thus, we expect any motion to only cause common-mode artifacts on

both signals whose effect will be mostly canceled when we take their ratio.

This problem can be solved by two different methods. First, reducing the source of the

error, in other words, we should have some consideration while designing the sensors

and have the least possible displacement. Second, detect the error during signal

processing, in other words when we receive the raw data use some mathematical and

statistical methods to separate the usable signals and error signal.

In [28]–[30], a new sensor is designed in a ring shape and it is said that it has less motion

artifact effect against other ring shaped sensors.

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A double ring shaped design is presented to degrade the external effects on the signal

acquisition. External force on the sensors, acceleration, and ambient light can be

lowered by this design also it will hold the sensors securely on the skin surface.

The conventional ring sensors will face some problems like the air gap when the sensor

will be pushed by an external force, the acceleration produced as a result of heavy weight

of the batteries circuitry, and difficulty of shielding the photoreceptor from ambient

light.

The double ring design lowers the effect of external force because it will be applied to

the outer ring and do not affect the inner ring which holds the sensors. Also, because of

the light weight of the inner ring, less acceleration will be applied to the sensors. Since

the outer ring covers the inner ring, the optical disturbance caused by ambient light is

reduced.

Besides lowering the motion artifact, as it is shown in Figure 24, this system has a low

power consumption.

Figure 24 Power consumption comparisons [28], [29].

In [46] and [47], the focus is on mathematical and statistical methods to detect and

reduce the motion artifacts. In [46], the analysis of the data is based on comparing the

time and frequency responses of the system which distinguishes between clean and

motion-corrupted data.

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2.5.1.2 Optical Interference

Bright ambient light or optical shunting (LED light reaching to photodiodes without

passing through the tissue) can cause an error in SpO2 readings. Proper optical shielding

of oximeter probe by the manufacturer (such as using black opaque material) and its

careful application and placement on the patient’s body by the user are the key factors

in reducing these interferences. Skin pigmentation and other surface light absorbers such

as nail polish might make the detected light too small to be reliably processed and thus

should be removed prior to measurement.

2.5.1.3 Dysfunctional Hemoglobin

Although oxygenated hemoglobin (HbO2) and reduced hemoglobin (Hb) compose

about 97% of hemoglobin concentration in blood and absorb most of the light passing

through blood, they do not represent the only hemoglobin species present in human

blood. For example, hemoglobin may combine with other substances such as carbon

monoxide to form carboxyhemoglobin (COHb) or become oxidized (lose one electron)

to make methemoglobin (MetHb). These types of abnormal hemoglobins, which cannot

transport oxygen to the tissue, are called dysfunctional hemoglobins. They have their

own optical characteristics (e.g. extinction coefficients for red and IR light) and

therefore distort the optical measurement of the blood oxygen level. Consequently, these

hemoglobins cause a small error in the reading of pulse oximeter SpO2. With proper

calibration using data taken from real human test subjects, commercial oximeters

usually account for and cancel this error.

2.5.1.4 Low Saturation Level

Pulse oximeters have a high potential for errors at low oxygen saturation, simply

because ethical manufacturers cannot induce severe hypoxia (deficient oxygenation of

tissue) repeatedly in volunteers for calibration purposes. In other words, since there are

not enough data, oximeters are poorly calibrated for saturations below 70%. Fortunately,

this limit is low enough that, in any case, it signals a major problem in the patient’s

oxygen transport system and requires the physician to take drastic measures, regardless

of the accuracy of the measurement.

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2.5.1.5 Sensor Placement

As expected, the performance of pulse oximeters depends on which part of the body

their probes are placed. Studies [5], [48] suggest that, in general, finger probes

demonstrate a more accurate response (~2%) than ear, nose, and forehead probes (3-

4%). On the contrary, ear and forehead probes are shown to have a faster response to

changing SpO2 values than finger probes [49] because finger probes require a greater

transit time for blood to reach the finger compared to ear or forehead.

In addition to design consideration and mathematical method to reduce the motion

artifact that was talked before, there is one other aspect which should be considered to

have better signal quality. This aspect is the site of the sensor on the body.

In [50], an experiment is designed to check the signal quality from a different part of the

body in various conditions. In this experiment, three identical reflectance mode sensors

are placed on a military helmet and the PPG signals of the forehead, right jaw, and chin

is measured. Additionally, another sensor that works in the transmission mode is

attached to the subject’s finger as a control signal.

The experiment is done in a vehicle, and the recording was during some steps including,

relax mode, reading an article, moving their head. All these steps are done in two modes

of static and moving vehicle.

Figure 25 below shows the result of this experiment,

Figure 25 Comparison of SpO2 recording from sensor location with annotated activities [50].

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41

The study results show that the recorded signals from jaw and chin are not stable during

movements, like talking. In contrast, the recorded signal from the forehead is stable

during all the activities, which makes the forehead a good choice to extract PPG signals

in reflection mode.

2.5.1.5.1 In Ear Sensors

One of the suitable sites for recording the PPG signal is the ear. The procedure is the

same as the conventional pulse oximeters which use two LEDs and one photoreceptor

for measuring the SpO2, heart rate, and other photoplethysmography signals. One of the

most important advantages of in-ear pulse oximetry is the fact that this method is less

sensitive to motion because the sensors will be placed in the ear channel and the motion

of the body does not disturb the measurements. So it can be used for cardiovascular

monitoring during sleep.

In [51], an in-ear reflectance sensor is designed for measuring cardiovascular signals

during sleep based on a clinical study. The designed sensor can simultaneously measure

the heart rate, 𝑆𝑝𝑂2 and the respiration rate, and it might decrease the amount of required

sensors, cables and other devices which improves the quality of the sleep during the

examination. In addition, it will be easier to use with a single sensor for homecare

devices.

Figure 26 Patient with reflective PPG sensor sealed into an individually customized ear mold. The

reflective sensor element is placed at the inner tragus. The sensor is connected to the sensor interface

device via a cable which is taped for artifact reduction[51].

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The experiments show excellent performance during the night for the in-ear sensor.

These results are probably because of the darkness and reduced motion. The signal

quality was quantified by signal to noise ratio (SNR) [43].

In [44], an optoelectronic sensor and the autonomous design of the in-mount

(embedded) measurement system is presented. For measuring the heart rate, different

algorithms are introduced and the developed sensor is compared with conventional

systems. In addition, the effect of external artifact is evaluated and some strategies have

been considered to reduce the motion artifact.

Figure 27 Functional principle of the micro-optic sensor. Since it works in reflection mode, special

precautions for the avoidance of direct crosstalk from LED to p-i-n diode have been taken [44].

The proposed silicon sensor chip contains a detector diode, an optically shielded monitor

diode, and a receiver diode. The receiver diode is positioned at one side of the sensor

and the monitor diode provides chip temperature measurement. Between the LEDs and

the p-i-n diodes, there is an optical barrier in the glass to minimize shunt light. About

50% of the consumed energy is used to drive the LEDs, while the remaining half is used

for the A/D conversion and pre-processing on the microcontroller.

In [31], [32], an unusual light path is presented for in-ear canal for which the expression

“circummission pulse oximetry” is suggested. As it is shown in Figure 28, the

optoelectronic sensors are faced outside of the canal and away from each other. It will

generate a minimal light path within the auditory canal’s wall. A more important

element in the sensor design is a shunt light blocker, an opaque plastic disc or half-

sphere, which covers the inner wall of the auditory canal. Based on the measured

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modulation and omega values, the shunt light level is lower than transmission pulse

oximetry finger sensors. It shows that the finger sensors, which have been considered

as shunt free by researchers, actually have some shunt light. Moreover, the

circummission pulse oximetry sensors have signals that are more reliable in the presence

of motion even with the heavy motion of the body.

Since both optoelectronic sensors, the emitters and the receiver, are positioned at 180°

to each other, the light must travel through the skin of the auditory canal. This long

length of the light path requires LED currents of over 0.5 A to have enough light at the

photodiode.

Figure 28 Auditory canal sensor [37].

2.5.1.5.2 Retinal Sensors

Operation of conventional pulse oximeters is based on measuring pulsatile changes in

the amount of light transmitted through a peripheral vascular bed, such as the fingertip

or earlobe. These pulsations are because of the pulsating volume of arterial blood and

are synchronous with the cardiac cycle. It is also possible for pulse oximeters to make

their measurements on light reflected from a vascular bed.

Since the operation of conventional pulse oximeters is based on the amount of light they

detect, they may not fulfill their role for cardiac patients. Whenever the amplitude of the

PPG signal is reduced, they cannot be distinguished from noise and then the oxygen

level cannot be monitored. As an example, during a cardiac surgery, there are several

reasons which can degrade the pulse amplitude, like small pulse pressure produced by

the cardiopulmonary bypass machine, poor perfusion, and hypothermia. As each of

these issues occur, a pulse oximeter with a probe placed at a peripheral location, such

as the fingertip, cannot provide reliable reading of oxygen saturation [53].

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In [54], a reflectance pulse oximeter to measure arterial oxygen saturation from the

retinal fundus is described. The transparency of the ocular media makes the eye the only

area of the body where systemic blood vessels can readily be observed, and this

accessibility can be exploited to have a reflectance pulse oximetry measurements from

those vessels. Figure 29 shows the contact lens probe.

Figure 29 Contact lens probe [55].

This method has some advantages, which can be considered in comparison to other types

of pulse oximetry.

First, the origin of the blood, which supplies the retinal arteries is the ophthalmic artery

from the internal carotid artery that supplies the cerebral tissues. Therefore, a good

indication of cerebral oxygen saturation can be measured from retinal SaO2. This is also

important because the cerebral tissues are sensitive to permanent damages during

hypoxic conditions.

Second, unlike peripheral blood flow, the retinal blood circulation is not susceptible to

arterial shutdown in case of shock, hypothermia, hypovolemia, hemorrhage, etc.

Conventional pulse oximeters are not functional in these situations and no reading will

be displayed, while a retinal pulse oximeter continues to work properly.

Finally, the measurement of retinal arterial oxygen saturation can be used to diagnose

and treat the retinal diseases.

2.5.1.5.3 Implantable Sensors

Implantable pulse oximetry sensors have almost the same design process and operation

as the non-invasive methods, but they have some differences in details, which can make

the measurements more accurate and possible to use for long term (several hours).

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For example, in transmission pulse oximetry, the AC signal level ranges from 1% to

10% of the total transmitted light. Due to the location of the implantable sensors directly

on an arterial vessel, an enhanced AC signal is expected, because the signals are less

influenced by the limitations associated with standard pulse oximetry such as ambient

light, low perfusion state, skin pigmentation, nail polish, intravenous dyes, etc. So the

key benefits of an implantable oxygen sensor are the capability of long term monitoring

and assessment, emergency detection, and, if necessary, for efficient treatment or

medication [56].

An implantable sensor can offer some diagnostic advantages for the disease patterns or

medical issues like cardiac insufficiency and pulmonary hypertension for high-risk

cardiovascular patients, chronic hypoxemia, congenital heart defects of children,

including surveillance and optimization of timing for surgery, and surveillance of

premature infants [56].

One of the most important considerations in implantable pulse oximetry is the materials,

which are used for manufacturing the sensors. The manufacturing of the various sensor

components relies on soft and flexible biocompatible polymer materials which let the

blood vessels do their normal function such that they can expand during dilation of the

vessel (up to 10% change of diameter) [57].

In addition, the alignment of the sensors is a very important part of this method because

LEDs and photoreceptor should be exactly in front of each other to have the least loss

of signal. Different methods have been introduced in papers, which use reflection or

transmission to measure the absorption of light.

The following method was introduced in [58], [59] and uses reflection analysis. As it is

shown in Figure 30, the artery is caught by two silicon stripes and the LEDs and

photodetectors will be placed under the artery. In this system, a robust wavelet algorithm

is used to resolve the problems of the physiological data. In addition, a wavelet based

de-noising for in-vivo recorded PPG is presented.

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Figure 30 3D model of the sensor mounted on an artery [59].

In [57], a MEMS-based sensor which uses transmission light is presented, it can be used

to measure blood oxygen saturation, pulse and respiration frequencies. This

biocompatible sensor uses a silicon-based manufacturing technique. The optoelectronic

devices are housed by two elastic silicone stripes. These flexible stripes can be wrapped

around the arterial blood vessels without affecting the blood flow even in large dilations.

Based on the in vivo experiments on domestic pigs, real time measurements provide

excellent data. The cross-sectional view of the sensor is shown in Figure 31 and the

sensor is shown in Figure 32.

Figure 31 Cross-sectional view of the sensor wrapped around a blood vessel. Both stripes are fixed with

ligature clips. The oxygen saturation is spectrometrically measured by the transmitted intensity of two

wavelengths [57].

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Figure 32 Encapsulated silicone stripe with two embedded LEDs mounted onto a laser-structured

polyimide foil before covering with black colored silicone adhesive for optical shielding [57].

Another implantable multi-sensor with silicon-based fabrication is presented in [60]

which besides measuring oxygen saturation level, can measure the blood pressure with

a piezoelectric sensor. The CAD drawing of the sensor is shown in Figure 33. An elastic

silicone stripe, which will be wrapped around an arterial blood vessel, houses the

sensors. Because of the use of soft material, there will be no effect on the vessels even

in large dilations. The pulse oximetry sensors can measure the oxygen level in the range

of 65 % to 100 % with a precision of ±1%.

Figure 33 CAD drawing of a silicone stripe wrapped around a blood vessel acting as a platform for

various embedded sensors [60].

2.5.2 Challenges

2.5.2.1 Power Consumption

Reducing the power consumption for continues and long time measurements and as a

result reducing the battery size is crucial in a pulse oximeter design. In a pulse oximetry

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system design, there are different parts, which affect the power consumption and each

part should have its own consideration. Most of the power will be consumed in the LED

drivers, the display, and the TIA part. The other parts of the system have less power

consumption and can be ignored.

The LED driver has the most consumption because it should provide lots of current to

turn the LEDs on and the required amount of the current and voltage is completely based

on the characteristics of the LED. There are some methods to reduce the power, which

is based on changing the duty cycle of the input pulse that turn the LEDs on and off. It

means that by reducing the duty cycle, the amount of power will be reduced, but it

should be considered that in that period of time the data should be read. Therefore, there

should be a trade-off between the duty cycle reduction and having valuable data [53].

Design of the TIA and filters is the other part of the system, which directly affects the

power consumption level. In [18], a new circuit and method are designed to reduce the

power consumption and the results show that it will improve the operation of the circuit.

The display is the last part, which can be removed in some systems because in some

cases the data needs to be transferred to another device. But in mobile devices, the

oxygen level value and the heart rate must be displayed to the user on the device. Other

parts of the pulse oximeter use some power including MCU and ADC, which their

values are low enough to be ignored.

2.5.2.2 Wired Sensors

One of the most important goals of recent biomedical devices is providing comfort for

the user and making the devices as small as possible. Tethering is always a reason to

make a device uncomfortable. Wireless systems avoid this problem; especially in the

case of pulse oximeters, they can reduce the motion artifact of the system. When the

system is wired, there is always a chance that the wires be stuck and change the position

of the sensors resulting in the wrong readings. Even though the wireless pulse oximeters

are a little more complicated in design, they have the advantage of better performance,

which makes them more requested.

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2.5.2.3 Sensor Size

Nowadays, almost all the electronic systems are going to the direction of reduction in

size, starting from reducing the size of the sensors (PDs and LEDs) and continuing to

amplifiers, transceivers, micro controller and other parts of a pulse oximetry system.

Small size pulse oximeters are more practical for long time monitoring of the oxygen

level of the blood. They can be used as a gadget to communicate with intelligent phones

during sleep, doing sport exercises or can be used in intelligent watches or bracelets.

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Chapter Three

Ring Shape Pulse

Oximeter Design

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3 Ring Shape Pulse Oximeter Design

3.1 Methodology

Based on the results and conclusions acquired by the literature review chapter, there is

a need for a pulse oximeter that can work regardless of the sensor location. The

conventional Pulse Oximeters use a finger clip containing the sensors which uses only

one set of LEDs and photodetectors (PD), which can measure only the signals from one

side of the finger. It means that there is a need for a pulse oximeter that can work even

if the sensor is dislocated or moved during the measurement. This feature guarantees a

valuable and reliable measurement especially during long term monitoring of a patient,

which in the case of patients with chronic diseases, where it is very vital to have a

continuous measurement. To have a comfortable device for a long time measurement

the placement and the size of the sensor is very critical. Although most of the pulse

oximeter devices are using the finger tip for measurements, this part of the finger is not

comfortable for the patient and it will cause lots of problems like motion artifact or

removing the device during the sleep, etc. This is why a ring-shaped pulse oximeter

which has a smaller size can be more practical for long time measurements. Also,

tethering has the same problems as big size devices and even more. So the idea of this

project is to have a ring shaped wireless multi-site pulse oximeter, which also needs to

be small.

The idea comes from the point that the signal level around the finger has different

amplitudes. The reason of having different level of signal can be explained by Figure

34. The idea of having multiple sensors is proposed and validated in [62].

Phalanx

Tendon

Epidermis

Proximal Phalanx

Veins

Arteries

Figure 34. Proximal phalanx structure [62].

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In [62], the functionality of a ring-type pulse oximeter with a multi-detector by optical

human tissue simulation was investigated. Moreover, they made two different finger-

base models to investigate the influence of the structural differences of the finger based

on the measuring performance of different ring-type pulse oximeter designs. They

discussed the optimal placement of the sensors and the efficiency of different ring-type

pulse oximeters with a single detector and a multi-detector on measuring SPO2. Finally,

wearable and wireless ring-type pulse oximeters with a single detector and a multi-

detector were also implemented to validate their simulation results.

Based on the results presented in [62], and the preliminary test that we performed it can

be concluded that from different angles the finger has a different structure which makes

a different path for light to pass through. Furthermore, this structure is different from

person to person.

To test this idea and developing the system some preliminary tests have been performed.

0° 180°

45°

90°

315° 225°

135°

270°

(b)

0° 180°

45°

90°

315° 225°

135°

270°

(a)

Figure 35 Preliminary acquired signal from around the proximal phalanx, (a) IR LED, (b) red LED

As it is mentioned before, the PPG signals is a combination of two signals. The pulsatile

(AC) component is caused by changes in blood volume which is synchronous with

heartbeats. The non-pulsatile (DC) component is caused by respiration, sympathetic

nervous system activity, and thermoregulation. Based on the preliminary tests around

the proximal phalanx, the strength of the AC and DC components of the PPG signal

varies by changing the position of the sensors. As it is shown in Figure 35, the amplitude

of the signal is different around the finger and it will change if the signal is acquired

from a different finger or different person. These signals were measured before the

assembly of the full system and each of them has been recorded separately. To prove

the advantage of using multi-site sensors, one set of sensors was used and placed around

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the finger of a subject and in 45⁰ positions, the measurements have been done. It should

be mentioned that in Figure 35 just the AC amplitude of the signal is shown while the

DC level varies too. The variation of DC level of the signal is out of range in comparison

to the AC level so they cannot be shown in the same figure.

Figure 35 shows the measurement results for one subject that is performed in 8 different

angles around the finger. The amplitude of the signal changes for each position and, as

we can see, they are not following the same pattern for red and IR signal. This means

that the variation of the signal is not predictable. These test has been performed with

five different co-workers (25 to 35 years old) and with their different fingers. The results

show that the maximum amplitude is not always in a fix position for all the subjects. So

it does not make sense to expect having a fixed place around the finger to locate the

sensors there. Also, because of other mentioned reasons, we decided to design a multi-

site wireless ring shaped pulse oximeter which is more comfortable and has smaller size.

3.2 Principles of Proposed System

The proposed system is a wireless ring-shaped multi-sensor pulse oximeter. The final

design is a ring which carries all the components and is based on a rigid-flex PCB. This

ring has six sets of sensors where each set is composed of a photodetector and two LEDs

(one red and one IR). It should be mentioned that based on the tests that have been

performed different number of sensors has been considered and finally six sensors have

been chosen. The reason for using six sets of sensors is to have a complete coverage

around the finger. Based on the size of the LEDs and PDs that has been considered

(SMD - 0603) more than six sensors took too much place and could not be fitted around

the finger, and lower that six was not providing enough data for the system. Three

multiplexer are used to choose between LEDs and PDs and send the input/output signals

to the proper section of the circuit. The output of the PDs goes through the analog front

end to be amplified, converted to the voltage and filtered. Also in this part of the circuit,

the AC and DC parts of the signal will be separated by a feed forward system which is

operated by ADC and DAC through the MCU. The measured PPG signal, which is

decomposed into AC and DC parts is sent to the microcontroller for basic SpO2

calculation and the results are transmitted to the base station by the radio transceiver for

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further processing. Another part of the system is the LED driver which is controlled by

a DAC to adjust the proper amount of current for LEDs. Also, there is a timing for the

LED driver which is controlled by the microcontroller to choose the red or IR LEDs

sequentially. The last part of the system is the power management unit which consists

of a battery, a voltage regulator, and a RLC filter to provide the system with power.

Each part of the proposed pulse oximeter is explained in details in the next chapter.

The block diagram of the designed pulse oximeter is presented in Figure 36. Each part

of the proposed pulse oximeter is explained in details in the following sections.

CPU

ADC

DAC Micro Controller Unit

TransmitterLED Driver

DAC

To LEDs

From PDsAnalog

Multiplexer

Analog DeMultiplexer

Ring-Shaped Sensor

ADC

Receiver

Power Management UnitBattery

RLC Filter

LDO Regulator

AC

Sig

na

l

DC

Sig

nal

Re

fere

nce

Vo

lta

ge

LED

Cu

rren

t

TIA

Analog Front End

Figure 36 Block diagram of the proposed ring shaped pulse oximeter

3.3 Photosensor

The whole idea of using multiple sensing probes is to provide flexibility and the ability

to use the system in both transmission and reflection modes within a single device. The

system determines if each site will be LEDs or PDs in order to provide the best sets of

sensors/LEDs. There are six red LEDs (660 nm), six infrared LEDs (940 nm) and six

PDs, all mounted on a rigid-flex printed circuit board (PCB). Each LED’s emission can

be received from any of the PDs. Hence, an LED can be chosen from one set and a PD

form another set, or more than one set of LEDs and/or PDs can be selected. To achieve

this goal, first, one set of LEDs and PD was selected to acquire the

photoplethysmography signal. Different LEDs and PDs have been tested to choose a set

with the highest signal amplitude and the lowest current sink. So, to solve this problem,

an analog front end with the highest possible output signal was designed. In the AFE,

the DC component of the PPG signal is removed because the DC component is much

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stronger than the AC component and together they will always saturate the ADC and

the measurement of AC signal would not be possible. By using the designed AFE and

permanently turning the LEDs ON, the preliminary tests were done. In the preliminary

tests, the AC component of the PPG signal on a fixed position around the finger was

measured with different sets of LEDs and PDs. Table 2 shows the test result of the AFE

with some of the LEDs and PDs that have been tested. It is necessary to mention that

due to form factor limitations of the designed pulse oximeter, only LEDs with SMD

packages (0603 and 0805) are tested and the larger packages were not used.

Table 2 Results of testing different LEDs and PDs to choose the best set.

PD LED Current Vpp

TEMD5080X01CT SML-310LTT86 (red) 46mA 135mV

TEMD5080X01CT HSMH-C190 (red) 39mA 112mV

TEMD5080X01CT LTST-C190CKT (red) 38mA 110mV

TEMD5080X01CT SML-LX0603SRW-TR (red) 35mA 72mV

TEMD5080X01CT BR1101W-TR (red) 40mA 105mV

TEMD5080X01CT APT1608F3C (IR) 64mA ≈ 0

TEMD5080X01CT SIR19-21C/TR8 (IR) 66mA ≈ 0

TEMD5080X01CT IR17-21C (IR) 66mA 20mV

PDB-C152SM SML-310LTT86 (red) 43mA 20mV

PDB-C152SM HSMH-C190 (red) 45mA ≈ 0

SFH2701 SML-210LTT86 (red) 45mA 33mV

SFH2701 SML-310LTT86 (red) 45mA 180mV

SFH2701 IR17-21C (IR) 60mA 192mV

PDB-C154SM SML-310LTT86 (red) 45mA 60mV

PDB-C154SM HSMH-C190 (red) 41mA 46mV

PDB-C154SM LTST-C190CKT (red) 37mA 44mV

PDB-C154SM BR1101W-TR (red) 40mA 44mV

PDB-C154SM SML-LX0603SRW-TR (red) 35mA 25mV

PDB-C154SM SML-210LTT86 (red) 45mA 25mV

PDB-C154SM SML-LX0805SRC-TR (red) 34mA 46mV

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The selection criteria to select the LEDs and photodetectors is to find a set that has the

lowest current consumption while generating the maximum output voltage at the output

of the AFE. Based on these measurements, the best set of red, IR and photodetector have

been chosen. The final prototype uses the SML-310LTT86 (ROHM Semiconductor) for

the red LED (660 nm), the IR17-21C/TR8 (Everlight) for the IR LED (940 nm), and the

SFH 2701 (OSRAM Opto Semiconductors) for the photodiode.

Figure 37Error! Reference source not found. shows the LEDs and PDs connections

in the final design. Figure 38 shows the test prototype of the ring sensor that should be

connected to the peripheral boards with wires. As it is shown in these figures, inside

each ring there are 6 red LEDs, 6 IR LEDs, and 6 PDs. They are sorted in a way that

make 6 sets of sensors, and Figure 39 shows the way they are placed on a PCB.

Figure 37 LED and PD connection.

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Figure 38 Test prototype of the ring sensors.

Photodetector

IR LED Red LED

Figure 39 One of the 6 sets of LEDs and PD inside the test prototype of the ring sensors.

3.4 Analog Front End

The analog front end is designed for amplification, conversion, filtering, and separation

of the signal components. As mentioned previously, to find the LEDs and PDs, a first

prototype of the AFE was used to separate the AC part of the PPG in the output. But

after choosing the LEDs and PDs the AFE circuit was modified. First, a fully analog

circuit was used to separate the AC and DC signals. In this circuit, a low pass and a high

pass Sallen-key filters were used to do the signal separation. The circuit is shown in the

Figure 40.

The output of this circuit was strong enough to have a high PI and the amplitude of the

output signal was high, but the problem was when using two LEDs at the same time.

When two red and IR LEDs are supposed to work sequentially, there is a big time

constant for the filters. So the output signals of the LEDs did not have enough time to

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return to their static levels and the signals were mixed together. Hence, it was not

possible to distinguish between the red and the IR signals.

Figure 40 AFE circuit with analog filters

Based on the abovementioned reasons the circuit was changed to the final circuit that is

presented in Figure 41. In the first stage, the output current of the PD which is in the

range of µA passes through the TIA and converts to voltage with a gain of 10K. A

capacitor is in parallel with the resistor to make a low pass filter for the first stage of the

AFE. After this stage, the signal goes through two different paths, one goes to the second

stage for more amplification and separation and one goes to the ADC of the

microcontroller. The signal that goes into the ADC passes through a digital low pass

filter to calculate the DC amount. Then a DAC generates the same value for the second

stage as a reference. The negative port of the amplifier in the second stage has both AC

and DC components of the signal, but the positive port just has the DC component. So

the second amplifier acts as a signal separator and the output has the AC signal which

is also amplified. Then this signal goes to the ADC for measurements and is used for

the final calculation. Again, in the second stage, there is a capacitor in parallel with a

resistor to make a low pass filter.

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Figure 41 Two stages AFE circuit with digital feedforward

3.5 LED Driver

The first test for choosing LEDs and PDs were done using the DC signals, but for the

final version, it should be pulses with variable duty cycles, because two red and IR

signals should be turned on/off sequentially and there should be some time gap between

the two signals. The first circuit was transistor-based and needed two DACs and two

pins to control the output light of each LED. The circuit is shown in Figure 42.

Figure 42 LED driver with transistor

After some preliminary tests and because of size considerations and current

consumption the circuit was rejected and another circuit was presented. To provide the

required current for the LEDs, two LED driver chips are used. The input signals of these

chips are provided by the DAC and have an adjustable current. These two LED drivers

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are used sequentially based on the timing of the microcontroller. In this system, as

shown in Figure 43, two LED drivers (MAX1916) are used, one for each wavelength.

Figure 43 LED driver circuit

3.6 Multiplexers

One of the goals of this project is to have multi-site measurements. To achieve this goal,

we should work with six sets of LEDs and PDs. However, the point is that we cannot

either use an analog front end for each of the PDs or use an LED driver for each of the

LEDs. The solution for this situation is to use multiplexers to switch between the LEDs

and the PDs. Therefore, for each wavelength of LEDs, one LED driver is considered

and one analog front end for PDs. In this case, there are two LED drivers for the red and

the IR LEDs. The multiplexers are controlled by the micro controller and based on the

need of the algorithm, they can be chosen to be turned on or off. In this system, we used

three multiplexers (MAX4781). As we can see in the circuit schematic, the input pins

of the multiplexer that is used for the PDs are connected to the ground by a resistor to

avoid noise. The reason is that the input signal for the PDs is very low current (~µA)

and it is easily affected by environment noise. The multiplexers circuit is shown in

Figure 44.

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Figure 44 Multiplexers circuit

3.7 Digital to Analog Converter

In this project, digital to analog converters (DAC) are used in two sections, in the LED

driver, and in the analog front end. In the LED driver circuit, they will adjust the output

current of the LEDs which will increase or decrease the intensity of light passing through

the tissue. In the analog front end circuit, the DAC is used to separate the DC and AC

signals. It will generate the exact DC amount of the output of the last stage and by use

of an amplifier the subtraction is done and the DC is subtracted from the whole signal

(AD+DC), leading to have the AC signal and do the oxygen level calculation. In this

system, the DAC (MCP4812) is controlled by the SPI protocol. Since this DAC has two

outputs and we need three outputs, two chip are used in the design of the system. The

connections for DAC circuit are shown in Figure 45.

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Figure 45 Digital to Analog converter circuit

3.8 Power Management Unit

Figure 46 shows the Power Management Unit (PMU) circuitry. The whole system is

powered by a 3.7-V, 100-mAh lithium-ion battery, so the PMU must provide a fixed

3.3-V supply voltage for the control unit and radio transmission. To address this

requirement, a low-drop voltage regulator (TLV70233 from Texas Instruments) is used,

which has a 51-dB PSRR to decrease the effects of high-frequency fluctuations

produced by the optical stimulation circuitry. In addition, a passive power supply filter

network is designed to be located after the regulation circuitry to remove the optical

fluctuation effects. This passive network has a low-pass behavior and compensates the

low PSRR of the LDO voltage regulator at higher frequencies [63].

The PMU has three sub-units including battery, LDO regulator, and RLC filter. Each

part is explained in details in the following sections. In addition to these three parts, a

reference voltage is provided for the rest of the circuit which is used specifically in the

analog front end.

Figure 46 Power management unit circuitry

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3.8.1 Battery

The energy source of the system is a very compact Li-ion battery (5 × 14 × 17 mm3) that

can provide 3.7 V up to 100 mA with a capacity of 1000 mAh. The small size of this

battery helps to fit in the rigid-flex PCB design.

3.8.2 Low Drop-Out Regulator

Since the microcontroller and other ICs use 3.3V as their input voltage and the battery

voltage is 3.7 V, a voltage regulator is used. This low drop-out regulator provides the

required voltage and current for the whole system. In this system, two LDO regulators

(TLV70233 and TLV70230) are used. One is used for LEDs and the other for the rest

of the system including the microcontroller, the DACs, the multiplexers, the transceiver,

the amplifiers and the LED drivers.

3.8.3 RLC Filter

The system uses LEDs and those sink large amount of current during each cycle, which

produce some ripples or spikes in the voltage source. These distortions affects the output

signal of the analog front end and/or the ADC reference of the microcontroller. To avoid

this problem, an RLC filter is designed which is shown in Figure 46 [63]. This low pass

RLC filter accompanying the LDO regulator increases the PSRR of the system to avoid

the negative effects of high current LEDs.

3.9 Microcontroller Unit

In this system, a low-power microcontroller, MSP430F5328 from Texas Instruments,

controls the operation of the pulse oximeter. The tasks of this microcontroller include

controlling the RF communications, digitizing the output of the AFE and generating the

stimulation patterns. This microcontroller, besides occupying a small area on the PCB,

has all the necessary peripherals required for the pulse oximetry system including the

required number of A/D channels, UART and SPI (serial peripheral interface)

peripherals. The operating voltage of this microcontroller and its IO (input/output)

voltages are 3.3 volts. The connections of the microcontroller are shown in Figure 47.

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Figure 47 Microcontroller connections

3.9.1 Analog to Digital Converter

To measure the output of the AFE and doing the processing in microcontroller the ADC

of the microcontroller is used. The AC and DC components of the output signal of the

PD are measured by the ADC. This microcontroller has a 12-bit analog to digital

converter, which can measure low voltages down to almost 1 mV that covers the small

changes of voltage in the PPG signal.

3.9.2 UART

To communicate with transceiver circuit and signal processing in the MATLAB the

UART is used. The measured signals by the ADC are encoded and sent in 8-bit packages

to the PC. In the PC, the signals are decoded and the results are used for further

processing.

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3.9.3 SPI

The DACs that are generating adjustable voltages for analog front end and LED driver

use the SPI protocol. The DACs’ registers should be set each time to generate new

voltage in each of their channel.

3.9.4 Programming

To have a flexible system and for future changes and calibrations in the system, a

connector is considered in the PCB design that has access to the pins of the

microcontroller for programming. These connections are shown in Figure 48.

Figure 48 Microcontroller connector for programming

3.10 Transceiver

In order to transmit the received data back to the base station and to receive the

stimulation parameters, a modular low-power digital wireless transceiver (nRF24L01+

from Nordic Semiconductor) was used. This transceiver is a low-power GFSK radio

module operating in the 2.4 GHz ISM (industrial, scientific and medical) band. The raw

data of this module can be as high as 2 Mbits per second and the net data rate can be up

to almost 700 kbits per second. An SPI interface is available to control the radio and the

chip package is QFN (Quad Flat No-leads) and measures 4×4 𝑚𝑚2. This radio module

requires an antenna tuned to the 2.4 GHz band and an antenna matching network

consisting of capacitors and inductors. In this project, a chip antenna has been used to

decrease the system footprint. Finally, in order to control the radio module, a C library

has been developed that is available in the Appendix A. The connections of the

transceiver is shown in Figure 49.

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Figure 49 Nordic transceiver connections and circuitry

3.11 Rigid-Flex PCB Design

Figure 50 shows the test setup including custom prototyping board, microcontroller

board, and ring sensor while measuring photoplethysmography signal. After testing and

validating this functionality of the system, to minimize the size of the pulse oximeter

with off the shelf components a Rigid-Flex PCB has been designed.

The idea of a ring shaped sensor is to try to reduce the size of the system and to provide

more comfortability for the pulse oximeter. Hence, the whole system should be placed

on a ring with the smallest possible size. This ring is designed using the same PCB that

is going to carry the circuitry of the system. The LEDs will be placed on the inner side

of the ring, and the rest of the chips and components will be placed on the outer side,

except for the transceiver circuitry that will be placed on the top of the PCB, as it is

shown in Figure 51, Figure 52 and Figure 53.

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Preliminary Test

Prototype Ring

Microcontroller

Launchpad

BoardCustom Prototyping

Board

Output Signal of one LED (Red)

Figure 50 Test Setup Including Custom Prototyping Board, Microcontroller and Ring Sensor

Figure 51 Designed rigid-flex PCB connections

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Figure 52 3D presentation of the ring shaped sensor

Multiplexers

AFE

LED Driver

DAC

PMU

Microcontroller

LEDs and PDs

Transmitter

BottomTop

Figure 53 Top and bottom view of ring shaped sensor

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3.12 Algorithm

To achieve the goal of this project, which is using multiple sensors at the same time an

algorithm is required. This algorithm should be able to check all the sensors at the

beginning of the operation then choose the set of LEDs and PDs with the highest

Perfusion Index (PI). This algorithm should be performed repeatedly if the sensors are

relocated or something happens that reduces the signal quality. Also, the signal at the

chosen set should have a minimum value of PI. If this condition is not satisfied, another

sensor should be chosen or the current of the LEDs should be amplified to have a higher

level of light. This algorithm is shown in Figure 54.

By using this algorithm, we can make sure that the best quality of the signal is provided

at the output. The term of best quality refers to the highest amplitude at the output of the

AFE between all the possible choices which are provided by each set of LEDs and PDs.

One of the important points of this algorithm is that it can manage to increase or decrease

the number of LEDs and it does not force the system to use just a specified LED or PD.

In other words, for example, the LEDs can be chosen from set 1 and the PD can be

chosen from set 4. In this case, the system is using transmission mode. Or the LEDs can

be chosen from the same set which makes the reflection mode.

The flowchart in Figure 54 explains the details of the algorithm. First, a counter is set to

1 (N=1), then the output signal of the selected set (N) of sensors will be recorded and

saved to the memory. This loop will continue for all the six sets. When the output signal

of all the sensors have been measured, by comparing the output values, the set of sensors

which has generated the highest amplitude will be chosen. The PI will be measured and

if it is in the acceptable range, the SpO2 will be calculated. But if the PI is not in the

right range, the current sourcing into the LED will be increased to increase the output

amplitude. In case the output signal is still low, another approach will be considered. In

this case, the LEDs next to the first selected LEDs will be powered on to compensate

the lack of light leading to have higher signal amplitude. This loop will be repeated

every few seconds to make sure that the best set of LEDs and PDs are always selected

and the movement of the ring or other motion artifacts do not degrade the signal strength.

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N = 1

Store

Read Sensor N

Find the Highest Amp. and Choose the N

N = 6

Measure PI

Turn on Sensors N-1 and N+1

Measure SpO2

Increase the current of sensor N

PI ≥ Accepted range

PI ≥ Accepted range

PI ≥ Accepted range

Display the SpO2

Yes

Yes

No

NoYes

Yes

Memory N = N + 1

Figure 54 Flowchart of the algorithm

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Chapter Four

Experimental Results

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4 Experimental Results

4.1 Quality of signal

The output results of the sensors can be presented as the output PPG signal of each

sensor. Since all the six sensors have the same placement and are using the same LEDs

and PDs, the tests are done just for one set of the six sensors. The results for multi-site

sensors are presented in the next part of this chapter.

The goal is to have a suitable level of perfusion index (PI) that allows us to measure the

oxygen level. As it was mentioned before, the output signal of one set of six LEDs and

PDs are recorded and presented in Figure 55.

Figure 55 AC output of the red and IR LEDs

This figure presents the AC signal of the system for the red and the IR LEDs. The DC

level is not presented because the DC signal is measured at the output of the first stage

of the AFE circuit (Figure 41) and is removed to avoid saturation of the output. The

reason for the saturation is that the DC signal has a higher amplitude than the AC signal

and after the final stage of amplification it will go higher than the voltage reference. In

Figure 56, we can see the changes in the DC signal before the final stage.

1.4

1.5

1.6

1.7

1.8

1.9

Vo

ltag

e (V

)

Time

AC output of the red and IR LEDs

ir_bl red_bl

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Figure 56 DC output signal of red and IR signal without tissue.

Figure 57 DC output signal of the red and the IR signals with the tissue.

Figure 56 is the DC output of the sensor while there is no tissue in front of it and Figure

57 shows the DC output when the sensor is close to the tissue. As it is shown in these

figures, in presence of the tissue the DC level is changed and it is easy to measure. In

case of IR signal in the presence of tissue the signal level moved from 1.60 V to 1.70 V

and in case of red signal, it moves from 1.59 V to 1.82 V.

Based on the previous figures, it is clear that the system can measure the AC and DC

components of the signal and then use them as input values to measure the oxygen level.

1.50

1.52

1.54

1.56

1.58

1.60

1.62

1.64

1.66

1.68

1.70

0 0.5 1 1.5 2 2.5 3

Vo

ltag

e (V

)

Time (×10 Seconds)

DC output of LEDs without tissue

1.6

1.65

1.7

1.75

1.8

1.85

1.9

0 0.5 1 1.5 2 2.5 3

Vo

ltag

e (V

)

Time (×10 Seconds)

DC output of LEDs with tissue

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These values are presented in Table 4 and Table 4 which shows the results of a

commercial pulse oximetry and the proposed system respectively. These tests are

performed on five different subjects and comparing the output results with commercial

pulse oximeters. The 20 measurements are done every 10 seconds.

Table 3 Oxygen level measurements with a commercial pulse oximeter

Subject 1 Subject 2 Subject 3 Subject 4 Subject 5

Nonin P.O.

(Onyx II 9560) 99 98 99 99 100

Table 4 Oxygen level measurements with the proposed system

Subject 1 Subject 2 Subject 3 Subject 4 Subject 5

Measurement 1 88.74 86.04 88.04 88.48 90.77

Measurement 2 92.32 85.57 88.59 87.39 90.11

Measurement 3 88.87 85.35 88.08 87.65 91.92

Measurement 4 88.86 85.03 87.74 87.99 90.98

Measurement 5 88.53 85.95 88.01 87.14 90.36

Measurement 6 88.48 85.53 87.15 88.47 91.19

Measurement 7 89.17 85.54 87.48 88.28 91.34

Measurement 8 86.72 84.98 87.15 87 91.63

Measurement 9 88.11 85.65 88.31 87.49 90.45

Measurement 10 89.36 85.55 88.52 87.83 90.3

Measurement 11 89.62 86.56 88.94 88.22 89.24

Measurement 12 88.24 85.59 86.13 88.11 90.08

Measurement 13 87.56 86.97 87.16 88.49 91.47

Measurement 14 88.71 86.15 87.92 88.48 92.53

Measurement 15 81.08 86.89 88.91 87.75 91.59

Measurement 16 88.88 85.49 88.74 87.1 90.9

Measurement 17 87.95 85.76 87.05 87.43 91.17

Measurement 18 86.63 85.48 87.78 88.4 91.07

Measurement 19 89.24 85.07 87.9 87.35 90.17

Measurement 20 88.32 87.93 87.49 88.06 90.12

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As we can see, the output percentages are in the same range for each subject but they

are not in the same range as the commercial device. The reason is the different offsets

that this system has and its constant values should be changed to be the same or close to

the commercial device. Since the output results are linear, by changing the constants,

the results are shifted to the proper percentage range. Table 5 shows the variance and

standard deviation of the measurements presented in Table 4.

Table 5 Variance and standard deviation of oxygen level measurements

Subject 1 Subject 2 Subject 3 Subject 4 Subject 5

Variance 4.220742 0.544162 0.514289 0.260521 0.60331

Standard Deviation 2.054444 0.737673 0.71714 0.510412 0.77673

It should be mentioned that the oxygen level of a normal person should be between 95%

and 100%. This is why the test could not be done on different values unless they are

done on special systems in hospitals.

Further research and finding better LEDs and PDs can help us to have better output

values that lead us to a higher quality of signals.

It should be mentioned that the calculation of the heart beat can be performed using a

simple algorithm that could be embedded in the system to measure the frequency of the

PPG signal. Since the focus of this work is on oxygen level measurement and

calculation, the results for heart beat are not presented.

4.2 Algorithm

The main contribution of this project is using multiple sensors that can be used at the

same time to find the best set that has a higher signal quality. After being sure about the

functionality of each sensor separately, the system output with all the sensors is

measured. As it is shown in Figure 58, the algorithm can find the best set of sensors if

there is a misplacement of the ring. Based on the algorithm, the system finds the set of

LEDs and PD that has the highest level of PI. In the performed test, the high-quality

signals were found at the lower part of the finger. In Figure 58 (a), sensor number 1 is

at the lower part of the finger and it is shown that the sensors 6, 1 and 2 have a better

signal quality than the rest. This signal quality is also demonstrated by checking the PI

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76

value. In Figure 58 (b), the sensor is relocated and sensor number 2 is at the bottom of

the finger. In this case, the signal qualities of sensors 1, 2 and 3 are better. This shows

that no matter where the sensors are placed, the one with the best signal quality will be

chosen. The same procedure happens in Figure 58 (c), (d), (e) and (f).

These results show that our system finds the sensors that have the higher PI and chooses

them to do the measurements. If there are no set of sensors that have the minimum level

of the output signal, it will provide more light to amplify the output signal then chooses

the best sensors.

1

2

3

4

5

6

4

5

6

1

2

3

3

4

5

6

1

2

5

6

1

2

3

4

2

3

4

5

6

1

6

1

2

3

4

5

(a)(b)

(c)

(d)

(e) (f)

PI = 2.5 PI = 2

PI = 0.5 PI = 3

PI = 2.5 PI = 3

PI = 1.5 PI = 4

PI = 1.5 PI = 3.5

PI = 2 PI = 4

PI = 0.1 PI = 3

PI = 1.5 PI = 3

PI = 2.5 PI = 2.5

PI = 1.5 PI = 4

PI = 2.5 PI = 2.5

PI = 2 PI = 2

PI = 2.5 PI = 2

PI = 0.1 PI = 3

PI = 2.5 PI = 2.5

PI = 1.5 PI = 4

PI = 0.5 PI = 3

PI = 1.5 PI = 3

PI = 2.5 PI = 2.5

PI = 1.5 PI = 3.5

PI = 0.5 PI = 3.5

PI = 1.5 PI = 4

PI = 2.5 PI = 2.5

PI = 0.1 PI = 3

PI = 2.5 PI = 2.5

PI = 1.5 PI = 3

PI = 1.5 PI = 3.5

PI = 2 PI = 3.5

PI = 0.5 PI = 3

PI = 0.1 PI = 3

PI = 2.5 PI = 2.5

PI = 1 PI = 3

PI = 1.5 PI = 4

PI = 1.5 PI = 4

PI = 2.5 PI = 2.5

PI = 0.1 PI = 2.5

Figure 58 Output signal of the system based on the algorithm in a different position of sensors.

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4.3 Power Consumption

Another important result of the system is the power consumption. Since this system is

working with a battery, it should have the minimum possible power consumption.

Although the system design has the minimum possible power consumption, it can be

even less by making some changes in future works. Table 6 shows the power

consumption of the system.

Table 6 System characteristics

Parameter Value

Voltage 3.3 V

Current cons. without LEDs < 1 mA

Current cons. Of LEDs 11 mA (red) + 15 mA (IR)

LED Stimulation Frequency 2.5 kHz

Duty Cycle 25 %

Sampling Frequency 250 Hz

Number of Sampling bits 12 bit

TIA Gain 200000 V/V (≈106 dB)

Input Referred Noise 0.25 μV (rms)

Average Power Consumption of the whole System Running

24.75 mW

As it is shown, most of the power is used by the LEDs and replacing them with better

LEDs can improve power usage. One of the easiest changes is to use the sleep mode of

the ICs that can reduce power consumption when they are not in use. Integrating the

whole system in one chip can be another future work, which reduces the power

consumption.

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Chapter Five

Discussion and Conclusion

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5 Discussion and Conclusion

Based on the acquired results, we showed the measurement results of the system. First,

the output of a single set of sensors has been presented which shows the proper operation

of the pulse oximetry system. As shown in Figure 55, Figure 56 and Figure 57, the AC

and DC components of the signals are properly measured and have been separated.

These signals respond to the changes that are generated by tissue and pulses.

The next step is to make sure the oxygen level calculation is steady and reliable. Based

on the measured values on different subjects the output percentage is steady and moving

around a fixed value with a minimum variation. To fix the offset problem an adjustment

should be done.

Another part of the results are about the algorithm that selects the best set of sensors.

Based on the results of the system, the algorithm shows a great operation which leads to

find the best set of sensors.

At the end, the electrical characteristics of the system are measured and shown in Table

6. The system is working with 3.3 V and less than 1 mA current (except LEDs). The

current consumed by LEDs are 11 mA (red) + 15 mA (IR), which will be divided to 4

because of the 25 % duty cycle.

In conclusion, the whole system is working as it was expected. Although, there are some

parts of the system that can be improved. For example, the algorithm can be improved

based on more test on different subjects, the power consumption can be reduced by

choosing other LEDs or a different type of LED driver circuitry. One of the other factors

of the system is the sensitivity of the measured signals which can be improved in the

future.

In this thesis, we presented a new ring shaped multi sensor probe for

photoplethysmography signal acquisition. We illustrated that the quality of signal

changes with respect to the location of the sensor around the finger, which requires a

solution that is independent of sensor location. The proposed design uses six sets of

LEDs and PDs to acquire the signal from different sites evenly distributed around the

finger and to choose the best sets of sensors that provide the highest signal quality. Such

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a ring shaped sensor can tremendously increase the comfort of the patient for long-term

monitoring periods.

The measurements show the proper functionality of the system as it was expected.

Although the signal strength at the part of the finger that we are measuring is not as high

as the tip of the finger or other parts of the body that usually are used, this system

managed to measure the oxygen level properly.

The development of the multi-side fractional pulse oximetry algorithm proved to be

challenging. Positive signs were observed and a lot was learned during the research. As

it was assumed, this method could be further studied and analyzed to find out how well

it recognizes abnormalities in photoplethysmography signals. Compared to a

commercially available fractional pulse oximetry device, the performance was

acceptable. We should test how the algorithm would behave with better quality data

(better sets of LEDs and PDs). In that case, it will lead the system to use the LEDs in a

shorter period of time which means saving power.

Altogether the work conducted for this thesis succeeded well and a lot more is known

of the requirements of fractional pulse oximetry measurement. An improved prototype

needs to be developed using the information acquired during the development of the

first prototype and this thesis. Also, the algorithm needs to be simplified and a lot more

work is required before the technology can be commercialized and used as an effective

tool in medical care.

Although one of the goals of this project was to reduce the size of the pulse oximeter,

with off the shelf components there are some limitations that the size cannot for less

than a specific dimension. So for the future phase of this project, integration of the

system is considered to implement all the system parts on a single chip. Using CMOS

technology reduces the size, and improves the accuracy of the system. Also, ultra low

power circuits help reducing the power consumption as it was tested and validated in

previous researches [64].

To obtain more results and covering a wider range of oxygen levels, more tests can be

performed at Respiratory Clinics of Institut universitaire de cardiologie et de

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pneumologie de Québec (IUCPQ) In this research center, various test can be performed

on different subjects with different blood oxygen level by precise respiratory test

machines. Thus, the system can be tested for oxygen level values less of than 95%,

which is amongst the minimum values that can be measured for a healthy person.

The results of this project have been published in two conferences. The first one is a

conference paper titled as “A Novel Wireless Ring-shaped Multi-site Pulse Oximeter”

and it was published in IEEE International Symposium on Circuits and Systems

(ISCAS) Montreal, Canada, 2016 [65]. The second paper is titled as “A Multi-

Wavelength Spectroscopy Platform for Whole Blood Characterization and Analysis”

and was published in IEEE Engineering in Medicine and Biology Society (EMBC),

Florida, USA, 2016 [66]. Another paper focusing on the multisite sensors design and

the algorithm of the system is planned to be submitted to a journal.

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Appendix A: Ring Pulse Oximeter Microcontroller

Code

#include <msp430.h>

#include <math.h>

// Variables

unsigned int i;

unsigned int k;

unsigned int counter_timer=0;

unsigned int counter_uart_ir=0;

unsigned int counter_uart_red=0;

// ADC variables

int ac_ir_in = 0;

int dc_ir_in = 0;

int dc_ir_out = 0;

float dc_output_ir=0;

int ac_red_in = 0;

int dc_red_in = 0;

int dc_red_out = 0;

float dc_output_red=0;

int offset=0;

// UART Variables

void UARTData(char);

unsigned char data_LSB=0;

unsigned char data_MSB=0;

// MUX Variables

void MUX_IR(int);

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void MUX_RED(int);

void MUX_PD(int);

// DAC Variables (each 100s for DAC generate 400 mV in output)

unsigned char DAC_register_high,DAC_register_low;

void DAC1_A(unsigned int);

void DAC1_B(unsigned int);

void DAC2_A(unsigned int);

void DAC2_B(unsigned int);

// Initial setting

void Setting (void);

int main(void) {

Setting();

while (1);

}

void Setting(void)

{

// Stop watchdog timer

WDTCTL = WDTPW | WDTHOLD;

P1DIR |= BIT5 + BIT6;

// Set P1.5 (IR) and P1.6(red) as output for LED driving

// Set Frequency to 16 MHz

UCSCTL3 = SELREF_2;

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// Set DCO FLL reference = REFO

UCSCTL4 |= SELA_2;

// Set ACLK = REFO

UCSCTL0 = 0x0000;

// Set lowest possible DCOx, MODx

// Loop until XT1,XT2 & DCO stabilizes -­‐ In this case only DCO has to stabilize

do

{

UCSCTL7 &= ~(XT2OFFG + XT1LFOFFG +

DCOFFG);

// Clear XT2,XT1,DCO fault flags

SFRIFG1 &= ~OFIFG;

// Clear fault flags

}while (SFRIFG1&OFIFG);

// Test oscillator fault flag

__bis_SR_register(SCG0);

// Disable the FLL control loop

UCSCTL1 = DCORSEL_5;

// Select DCO range 16MHz operation

UCSCTL2 |= 499;

// Set DCO Multiplier for 8MHz

// (N + 1) * FLLRef = Fdco

// (499 + 1) * 32768 = 16MHz

__bic_SR_register(SCG0);

// Enable the FLL control loop

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// Worst-­‐case settling time for the DCO when the DCO range bits have been

// changed is n x 32 x 32 x f_MCLK / f_FLL_reference. See UCS chapter in 5xx

// UG for optimization.

// 32 x 32 x 8 MHz / 32,768 Hz = 250000 = MCLK cycles for DCO to settle

__delay_cycles(250000);

//P7DIR |= BIT7; // MCLK set out to pins

//P7SEL |= BIT7;

// DAC Settings (SPI)

P1DIR |= BIT2 + BIT3 + BIT4;

// Set P1.2 and P1.4 as output (DAC1 and DAC2 Selection), Set P1.3 as output

(LDAC)

P1OUT |= BIT2 + BIT4;

// CS = 1

P2DIR |= BIT7;

// Set P2.7 to output direction

P2SEL |= BIT7;

// Enable SCK

P3DIR |= BIT3;

// Set P3.3 to output direction

P3SEL |= BIT3;

// Enable SIMO

UCA0CTL1 |= UCSWRST;

// **Put state machine in reset**

UCA0CTL0 |= UCMST+UCSYNC+UCCKPL+UCMSB;

// 3-pin, 8-bit SPI master, Clock polarity high, MSB

UCA0CTL1 |= UCSSEL_2;

// SMCLK

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UCA0BR0 = 0x02;

// /2

UCA0BR1 = 0;

//

UCA0MCTL = 0;

// No modulation

UCA0CTL1 &= ~UCSWRST;

// **Initialize USCI state machine**

// MUX Setting

P6DIR |= BIT0 + BIT1 + BIT2 + BIT3;

// P6.0,1,2,3 set as output // RED

P4DIR |= BIT0 + BIT1 + BIT2 + BIT3;

// P4.0,1,2,3 set as output // PD

P3DIR |= BIT0 + BIT1 + BIT2 + BIT4;

// P3.0,1,2,4 set as output // IR

// UART Setting

P4SEL |= BIT4 + BIT5;

// P4.4,5 = USCI_A1 TXD/RXD

UCA1CTL1 |= UCSWRST;

// **Put state machine in reset**

UCA1CTL1 |= UCSSEL_2;

// SMCLK

UCA1BR0 = 8;

// 1MHz 115200 (see User's Guide)

UCA1BR1 = 0;

// 1MHz 115200 (Page 993 - slau208n)

// UCA1MCTL |= UCBRS_1 + UCBRF_0;

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// Modulation UCBRSx=1, UCBRFx=0

UCA1MCTL |= 0xF7 + UCBRF_10;

UCA1CTL1 &= ~UCSWRST;

// **Initialize USCI state machine**

// ADC Setting

P6DIR &= ~BIT4;

// P6.4 input

P6SEL |= BIT4;

// Enable A/D channel A4

P6DIR &= ~BIT5;

// P6.5 input

P6SEL |= BIT5;

// Enable A/D channel A5

ADC12CTL0 = ADC12ON + ADC12MSC + ADC12SHT0_2;

// Turn on ADC12, set sampling time

ADC12CTL1 = ADC12SHP + ADC12CONSEQ_1;

// Use sampling timer, single sequence

ADC12MCTL0 = ADC12INCH_4;

// ref+=AVcc, channel = A0

ADC12MCTL1 = ADC12INCH_5 + ADC12EOS;

// ref+=AVcc, channel = A1, end seq.

ADC12IE = 0x02;

// Enable ADC12IFG.1

ADC12CTL0 |= ADC12ENC;

// Enable conversions

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// Timer Setting

TA0CCTL0 = CCIE;

// CCR0 interrupt enabled

TA0CCR0 = 4187;

// Capture Compare Register

TA0CTL = TASSEL_2 + MC_1 + TACLR;

// SMCLK, upmode, clear TAR

__bis_SR_register(LPM0_bits + GIE);

// Enter LPM0, enable interrupts

__no_operation();

// For debugger

}

void UARTData(char data)

{

while (!(UCA1IFG&UCTXIFG));

// USCI_A0 TX buffer ready?

UCA1TXBUF = data;

// TX -­-> RXed character

}

void DAC1_A(unsigned int dac_value_a)

{

dac_value_a = dac_value_a << 2;

DAC_register_low = dac_value_a & 0xFF;

DAC_register_high = (dac_value_a >> 8) & 0x0F;

DAC_register_high |= 0x10;

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P1OUT &= ~BIT2;

// CS = 0

while (!(UCA0IFG & UCTXIFG));

// USCI_A0 TX buffer ready?

UCA0TXBUF = DAC_register_high;

// Transmit first character

__delay_cycles(1);

// delay

while (!(UCA0IFG & UCTXIFG));

// USCI_A0 TX buffer ready?

UCA0TXBUF = DAC_register_low;

// Transmit first character

__delay_cycles(13);

// delay

P1OUT |= BIT2;

// CS = 1

P1OUT &= ~BIT3;

// LDAC = 0

__delay_cycles(1);

// delay

P1OUT |= BIT3;

// LDAC = 1

}

void DAC1_B(unsigned int dac_value_b)

{

dac_value_b = dac_value_b << 2;

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DAC_register_low = dac_value_b & 0xFF;

DAC_register_high = (dac_value_b >> 8) & 0x0F;

DAC_register_high |= 0x90;

P1OUT &= ~BIT2;

// CS = 0

while (!(UCA0IFG&UCTXIFG));

// USCI_A0 TX buffer ready?

UCA0TXBUF = DAC_register_high;

// Transmit first character

__delay_cycles(1);

// delay

while (!(UCA0IFG&UCTXIFG));

// USCI_A0 TX buffer ready?

UCA0TXBUF = DAC_register_low;

// Transmit first character

__delay_cycles(13);

// delay

P1OUT |= BIT2;

// CS = 1

P1OUT &= ~BIT3;

// LDAC = 0

__delay_cycles(1);

// delay

P1OUT |= BIT3;

// LDAC = 1

}

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void DAC2_A(unsigned int dac_value_a)

{

dac_value_a = dac_value_a << 2;

DAC_register_low = dac_value_a & 0xFF;

DAC_register_high = (dac_value_a >> 8) & 0x0F;

DAC_register_high |= 0x10;

P1OUT &= ~BIT4;

// CS = 0

while (!(UCA0IFG&UCTXIFG));

// USCI_A0 TX buffer ready?

UCA0TXBUF = DAC_register_high;

// Transmit first character

__delay_cycles(1);

// delay

while (!(UCA0IFG&UCTXIFG));

// USCI_A0 TX buffer ready?

UCA0TXBUF = DAC_register_low;

// Transmit first character

__delay_cycles(13);

// delay

P1OUT |= BIT4;

// CS = 1

P1OUT &= ~BIT3;

// LDAC = 0

__delay_cycles(1);

// delay

P1OUT |= BIT3;

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// LDAC = 1

}

void DAC2_B(unsigned int dac_value_b)

{

dac_value_b = dac_value_b << 2;

DAC_register_low = dac_value_b & 0xFF;

DAC_register_high = (dac_value_b >> 8) & 0x0F;

DAC_register_high |= 0x90;

P1OUT &= ~BIT4;

// CS = 0

while (!(UCA0IFG&UCTXIFG));

// USCI_A0 TX buffer ready?

UCA0TXBUF = DAC_register_high;

// Transmit first character

__delay_cycles(1);

// delay

while (!(UCA0IFG&UCTXIFG));

// USCI_A0 TX buffer ready?

UCA0TXBUF = DAC_register_low;

// Transmit first character

__delay_cycles(13);

// delay

P1OUT |= BIT4;

// CS = 1

P1OUT &= ~BIT3;

// LDAC = 0

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__delay_cycles(1);

// delay

P1OUT |= BIT3;

// LDAC = 1

}

// Multilexer RED

void MUX_RED(int x)

// PORT6 _ BIT 0,1,2,3

{

P6OUT &= ~BIT0;

// Disable the MUX

switch(x)

{

case 1:

P6OUT &= ~BIT1; // 0

P6OUT &= ~BIT2; // 0

P6OUT &= ~BIT3; // 0

break;

case 2:

P6OUT |= BIT1; // 1

P6OUT &= ~BIT2; // 0

P6OUT &= ~BIT3; // 0

break;

case 3:

P6OUT &= ~BIT1; // 0

P6OUT |= BIT2; // 1

P6OUT &= ~BIT3; // 0

break;

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case 4:

P6OUT |= BIT1; // 1

P6OUT |= BIT2; // 1

P6OUT &= ~BIT3; // 0

break;

case 5:

P6OUT &= ~BIT1; // 0

P6OUT &= ~BIT2; // 0

P6OUT |= BIT3; // 1

break;

case 6:

P6OUT |= BIT1; // 1

P6OUT &= ~BIT2; // 0

P6OUT |= BIT3; // 1

break;

}

P6OUT |= BIT0;

// Enable the MUX

}

// Multiplexer IR

void MUX_IR(int x)

// PORT3 _ BIT 0,1,2,4

{

P3OUT &= ~BIT0;

// Disable the MUX

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102

switch(x)

{

case 1:

P3OUT &= ~BIT1; // 0

P3OUT &= ~BIT2; // 0

P3OUT &= ~BIT4; // 0

break;

case 2:

P3OUT |= BIT1; // 1

P3OUT &= ~BIT2; // 0

P3OUT &= ~BIT4; // 0

break;

case 3:

P3OUT &= ~BIT1; // 0

P3OUT |= BIT2; // 1

P3OUT &= ~BIT4; // 0

break;

case 4:

P3OUT |= BIT1; // 1

P3OUT |= BIT2; // 1

P3OUT &= ~BIT4; // 0

break;

case 5:

P3OUT &= ~BIT1; // 0

P3OUT &= ~BIT2; // 0

P3OUT |= BIT4; // 1

break;

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case 6:

P3OUT |= BIT1; // 1

P3OUT &= ~BIT2; // 0

P3OUT |= BIT4; // 1

break;

}

P3OUT |= BIT0;

// Enable the MUX

}

// MUX PD

void MUX_PD(int x)

// PORT4 _ BIT 0,1,2,3

{

P4OUT &= ~BIT0;

// Disable the MUX

switch(x)

{

case 1:

P4OUT &= ~BIT1; // 0

P4OUT &= ~BIT2; // 0

P4OUT &= ~BIT3; // 0

break;

case 2:

P4OUT |= BIT1; // 1

P4OUT &= ~BIT2; // 0

P4OUT &= ~BIT3; // 0

break;

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case 3:

P4OUT &= ~BIT1; // 0

P4OUT |= BIT2; // 1

P4OUT &= ~BIT3; // 0

break;

case 4:

P4OUT |= BIT1; // 1

P4OUT |= BIT2; // 1

P4OUT &= ~BIT3; // 0

break;

case 5:

P4OUT &= ~BIT1; // 0

P4OUT &= ~BIT2; // 0

P4OUT |= BIT3; // 1

break;

case 6:

P4OUT |= BIT1; // 1

P4OUT &= ~BIT2; // 0

P4OUT |= BIT3; // 1

break;

}

P4OUT |= BIT0;

// Enable the MUX

}

// Timer0 A0 interrupt service routine

#pragma vector=TIMER0_A0_VECTOR

__interrupt void TIMER0_A0_ISR(void)

{

switch (counter_timer % 8)

{

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case 0:

// LED driving

DAC1_A(350);

// 5 uSec (+ 1.26us(100) / 1.88us(200) / 2.6us(300) / 3.32us(400) / 3.96us(500) /

4.66us(600) / 5.38us(700) / 6us(750))

MUX_IR(1);

MUX_RED(1);

MUX_PD(1);

break;

case 1:

__delay_cycles(1000);

// ADC reading

//P1OUT |= BIT5;

ADC12CTL0 |= ADC12SC;

// Start conversion

while (!(ADC12IFG & BIT1));

ADC12CTL0 &= ~ADC12SC;

// Stop conversion

dc_ir_in = ADC12MEM1 - offset;

// Move results, IFG is cleared

//P1OUT &= ~BIT5;

break;

case 2:

DAC1_A(0);

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//DAC2_A(0);

counter_uart_ir++;

if (counter_uart_ir==1)

{

//P1OUT |= BIT5;

// Send by UART IR

UARTData('i');

// DC preparation

data_LSB = 0x0080 | (0x003F & dc_ir_in);

// to put 10 in the first 2 bits

data_MSB = 0x00C0 | (0x003F & (dc_ir_in >> 6));

// to put 11 in the first 2 bits

// Transmitting DC signal

UARTData(data_LSB);

// 5 uSec

UARTData(data_MSB);

// 5 uSec

counter_uart_ir = 0;

//P1OUT &= ~BIT5;

}

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break;

case 3:

// ADC reading

ADC12CTL0 |= ADC12SC;

// Start conversion

while (!(ADC12IFG & BIT1));

ADC12CTL0 &= ~ADC12SC;

// Stop conversion

offset = ADC12MEM1;

// Move results, IFG is cleared

break;

case 4:

// LED driving

DAC1_B(350);

// 5 uSec (+ 1.26us(100) / 1.88us(200) / 2.6us(300) / 3.32us(400) / 3.96us(500) /

4.66us(600) / 5.38us(700) / 6us(750))

break;

case 5:

__delay_cycles(1000);

// ADC reading

//P1OUT |= BIT5;

ADC12CTL0 |= ADC12SC;

// Start conversion

while (!(ADC12IFG & BIT1));

ADC12CTL0 &= ~ADC12SC;

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// Stop conversion

dc_red_in = ADC12MEM1 - offset;

// Move results, IFG is cleared

//P1OUT &= ~BIT5;

break;

case 6:

DAC1_B(0);

//DAC2_A(0);

counter_uart_red++;

if (counter_uart_red == 1)

{

// Send by UART Red

UARTData('r');

// DC preparation

data_LSB = 0x0080 | (0x003F & dc_red_in);

// to put 10 in the first 2 bits

data_MSB = 0x00C0 | (0x003F & (dc_red_in >> 6));

// to put 11 in the first 2 bits

// Transmitting DC signal

UARTData(data_LSB);

// 5 uSec

UARTData(data_MSB);

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// 5 uSec

counter_uart_red = 0;

}

break;

case 7:

// ADC reading

ADC12CTL0 |= ADC12SC;

// Start conversion

while (!(ADC12IFG & BIT1));

ADC12CTL0 &= ~ADC12SC;

// Stop conversion

offset = ADC12MEM1;

// Move results, IFG is cleared

break;

}

counter_timer++;

}

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Appendix B: Ring Pulse Oximeter MATLAB Code

Main

BD = 115200;

Port = 'COM3';

BUFFERIN = 1500000;

global counter

global t

global buffer_ac_ir

global buffer_dc_ir

global buffer_ac_red

global buffer_dc_red

counter =0;

buffer_ac_ir = zeros(1,100);

buffer_dc_ir = zeros(1,100);

buffer_ac_red = zeros(1,100);

buffer_dc_red = zeros(1,100);

disp('Program started');

try

board = serial(Port, 'BaudRate', BD, 'DataBits',8, 'Timeout', 5);

set(board, 'InputBufferSize', BUFFERIN);

fopen(board);

% Initialize the stripchart

Fs = 1000; %sampling frequency

ScopeWidth = 1; %defines the stripchart's scope width

Nb_curves = 1; %number of curves plotted in the stripchart

figure(1);

stripchart(Fs, ScopeWidth, Nb_curves);

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% Setup the timer

TMR_PERIOD = 0.001; %period in s

t = timer('TimerFcn', @(x,y)getData(board), 'Period', TMR_PERIOD);

set(t,'ExecutionMode','fixedRate');

start(t);

catch err

disp('Unexpected program termination');

disp(err.message);

fclose(board);

throw(err);

end

getData:

function getData(board)

% Variables

global G2

global buffer_ac_ir

global buffer_dc_ir

global buffer_ac_red

global buffer_dc_red

global counter

global data_in_ac_ir

global data_in_dc_ir

global data_in_ac_red

global data_in_dc_red

data_in_ac_ir = 0;

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data_in_dc_ir = 0;

data_in_ac_red = 0;

data_in_dc_red = 0;

G2 = 20;

counter = counter + 1;

NB_bytes_code = 1;

NB_bytes_to_read = 9;

% Signal Acquisition

code_char = fread(board, NB_bytes_code);

% Waitng to find an 'i' charcter as IR

while (code_char ~= 105)

code_char = fread(board, NB_bytes_code);

end

% Reading ir signal

%if (code_char == 105 ) % ascii code for 'i' is 105

ir_data = fread(board, NB_bytes_to_read);

ac_LSB = de2bi(ir_data(1),8);

ac_MSB = de2bi(ir_data(2),8);

dc_LSB = de2bi(ir_data(3),8);

dc_MSB = de2bi(ir_data(4),8);

if (ac_LSB(8)== 0 && ac_LSB(7)== 0 && ac_MSB(8)== 0 &&

ac_MSB(7)== 1)

data_in_ac_ir(1) = bi2de(ac_LSB) + (bi2de(ac_MSB)-64)*64;

data_in_ac_ir(2) = bi2de(ac_LSB) + (bi2de(ac_MSB)-64)*64;

end

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if (dc_LSB(8)== 1 && dc_LSB(7)== 0 && dc_MSB(8)== 1 &&

dc_MSB(7)== 1)

data_in_dc_ir (1)= (bi2de(dc_LSB)-128) + (bi2de(dc_MSB)-192)*64;

data_in_dc_ir (2)= (bi2de(dc_LSB)-128) + (bi2de(dc_MSB)-192)*64;

end

%end

%code_char = fread(board, NB_bytes_code);

% Waitng to find an 'r' charcter as red

% while (code_char ~= 114)

% code_char = fread(board, NB_bytes_code);

% end

% Reading red signal

%if (code_char == 114 ) % ascii code for 'r' is 114

%red_data = fread(board, NB_bytes_to_read);

ac_LSB = de2bi(ir_data(6),8);

ac_MSB = de2bi(ir_data(7),8);

dc_LSB = de2bi(ir_data(8),8);

dc_MSB = de2bi(ir_data(9),8);

if (ac_LSB(8)== 0 && ac_LSB(7)== 0 && ac_MSB(8)== 0 &&

ac_MSB(7)== 1)

data_in_ac_red(1) = bi2de(ac_LSB) + (bi2de(ac_MSB)-64)*64;

data_in_ac_red(2) = bi2de(ac_LSB) + (bi2de(ac_MSB)-64)*64;

end

if (dc_LSB(8)== 1 && dc_LSB(7)== 0 && dc_MSB(8)== 1 &&

dc_MSB(7)== 1)

data_in_dc_red(1) = (bi2de(dc_LSB)-128) + (bi2de(dc_MSB)-192)*64;

data_in_dc_red(2) = (bi2de(dc_LSB)-128) + (bi2de(dc_MSB)-192)*64;

end

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%end

buffer_ac_ir (counter)= data_in_ac_ir(1);

buffer_dc_ir (counter)= data_in_dc_ir(1);

buffer_ac_red (counter)= data_in_ac_red(1);

buffer_dc_red (counter)= data_in_dc_red(1);

if (counter == 100)

dc_ir = mean (buffer_dc_ir) * G2;

p2p_ir = peak2peak(buffer_ac_ir);

dc_red = mean (buffer_dc_red) * G2;

p2p_red = peak2peak(buffer_ac_red);

Output = [dc_ir, p2p_ir, dc_red, p2p_red];

disp(Output);

ratio_ir = p2p_ir / dc_ir;

ratio_red = p2p_red / dc_red;

total_ratio = ratio_red / ratio_ir;

disp(total_ratio);

SPO2 = 100 * (0.81 - (0.18 * total_ratio))/ (0.73 + (0.11 * total_ratio));

disp(strcat('SPO2 : ', sprintf(' %.2f ', SPO2), '%'));

counter =0;

end

% Updating the stripchart

figure(1);

stripchart(data_in_ac_ir(1 : end));drawnow;

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Stripchart:

% Original version of StripChart written by Bob Bemis

% This modification was developed by Michelle Hirsch to match syntax

% of SpectrumScope

% Copyright 2003-2004 The MathWorks, Inc

%% Parse input arguments

% Decision tree:

% + Initialize or update?

% o If update -> OK

% o If initialize -> Axes specified, or use GCA?

error(nargchk(1,4,nargin))

%% Initialize or update?

% If first or second input argument is not a scalar, it must be data - i.e. we are

% updating

if numel(varargin{1}) > 1 || numel(varargin{2}) > 1 % Update

action = 'update';

if nargin==1 % Use current axes

hAxes = gca;

data = varargin{1};

else

hAxes = varargin{1}; % Axes was specified

data = varargin{2};

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end;

% If the user has not initialized this scope, do it for them

parms = getappdata(hAxes,'StripChartParameters');

% Ensure that scope has been initialized

if isempty(parms)

% Use default values

Fs = 1;

data = rowmajor(data);

[Ns,NTraces] = size(data);

AxesWidth = Ns*Fs;

feval(mfilename,hAxes,Fs,AxesWidth,NTraces); % This recursive call will

initialize the scope

% Get the new parameter structure

parms = getappdata(hAxes,'StripChartParameters');

end;

else % Initialize

action = 'init';

if ~isaxes(varargin{1}) % Easy mode, no handle passed in

% Use current axes

hAxes = gca;

Fs = varargin{1};

AxesWidth = varargin{2};

Ns = AxesWidth*Fs; % Number of samples across axes

if nargin==3

NTraces = varargin{3};

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else

NTraces = 1;

end;

else % Expert mode, passed handle in

hAxes = varargin{1};

Fs = varargin{2};

AxesWidth = varargin{3};

Ns = AxesWidth*Fs; % Number of samples across axes

if nargin==4

NTraces = varargin{4};

else

NTraces = 1;

end;

end;

end;

%% Dole out the work

%

switch action

case 'init' % Initialize

% Build structure to internally pass information

parms.Fs = Fs; % Sample Rate

parms.NTraces = NTraces; % Number of lines in plot

parms.hAxes = hAxes; % Handle to axes

parms.Ns = Ns; % Number of samples across axes

parms.AxesWidth = AxesWidth; % Requested Axes Width (s)

% Store parameter structure

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setappdata(hAxes,'StripChartParameters',parms);

localInitScope(parms) % Initialize scope

case 'update' % Update

parms = getappdata(hAxes,'StripChartParameters');

% Error checking

% Ensure that scope has been initialized. This shouldn't slip

% through to here.

if isempty(parms)

error(['The spectrum scope must first be initialized ' ...

'with the sample rate: stripchart(hAxes,Fs)']);

end;

% Force data to be in columns. Allow for multiple columns. This will

% error if data actually has more channels than samples.

data = rowmajor(data);

% Check that the number of columns corresponds to the number of lines

nc = size(data,2); % Number of columns

if nc ~= parms.NTraces

error(['Size mismatch. You initialized stripchart with '

num2str(parms.NTraces) ...

' lines, but just passed in ' num2str(nc) ' channels of data. These' ...

' numbers must be the same.']);

end;

localUpdateScope(data,parms) % Update the scope

end;

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% Return appropriate output argument

if nargout

varargout{1} = parms.hAxes;

end;

%

*******************************************************************

****

% Initialize the Scope

function localInitScope(parms)

% Set axes

t = (0:1:parms.Ns-1)'/parms.Fs;

% Add line(s)

parms.hLine = plot(t,NaN*ones(length(t),parms.NTraces), ...

'Tag','StripChart', ...

'Parent',parms.hAxes);

set(parms.hAxes,'XLim',[0 parms.AxesWidth]);

setappdata(parms.hAxes,'StripChartParameters',parms);

%% Get handle to the figure

% Turn doublebuffer on to eliminate flickering

hFig = get(parms.hAxes,'Parent');

% In R14, it's possible that hFig would return a handle to a panel, not a

% figure

if ~strcmp(get(hFig,'Type'),'figure')

hFig = get(hFig,'Parent');

end;

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%%

% Format the axes

% maintain X tick spacing

Ticks = get(parms.hAxes,'XTick');

dX = mean(diff(Ticks));

% enforce right justification for grid lines & remove X tick labels

Range = get(parms.hAxes,'XLim');

if Range(end)~=Ticks(end)

Ticks = fliplr(Range(end):-dX:Range(1));

set(parms.hAxes,'XTick',Ticks)

end

set(parms.hAxes,'XTickLabel',[],'XTickMode','Manual','XGrid','On','YGrid','On')

%%

% Label the plot.

% There's a bug in R13 when creating xlabel and ylabel with direct

% parenting - the alignment gets all messed up. Instead, make hAx current

% axes

ca = gca;

set(hFig,'CurrentAxes',parms.hAxes);

xlabel(sprintf('%g%s/div',dX,'s'))

ylabel('Amplitude');

set(hFig,'CurrentAxes',ca);

axis manual

%%

% Turn doublebuffer on to eliminate flickering

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set(hFig,'DoubleBuffer','on');

%

*******************************************************************

****

% Update the plot.

function localUpdateScope(data,parms)

% Callback function to update stripchart with new data

% Dynamically modify Magnitude axis as we go. Expand, but don't shrink.

maxM=max(data(:));

minM=min(data(:));

yax2=get(parms.hAxes,'YLim');

if minM<yax2(1),

yax2(1)=minM;

end

if maxM>yax2(2),

yax2(2)=maxM;

end

set(parms.hAxes,'YLim',yax2)

hLine = parms.hLine;

[newPts,NLines] = size(data);

yData = get(hLine,'YData'); % old data

if NLines==1 %Special case for one line only

yData(1:end-newPts) = yData(newPts+1:end); % shift old data left

yData(end-newPts+1:end) = data; % new data goes on right

set(hLine,'YData',yData) % update plot

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else

for ii=1:NLines

yData{ii}(1:end-newPts) = yData{ii}(newPts+1:end); % shift old data left

yData{ii}(end-newPts+1:end) = data(:,ii); % new data goes on right

end;

set(hLine,{'YData'},yData) % update plot

end;

%

*******************************************************************

****

% Utility - isaxes

function truefalse = isaxes(h)

% ISAXES(H) True if H is a handle to a valid axes

truefalse = 0; % Start false

if ishandle(h)

if strcmp('axes',get(h,'Type'))

truefalse = 1;

end;

end;

%

*******************************************************************

****

% Utility - rowmajor

function data = rowmajor(data)

% Force data to be row major. i.e. more rows than columns

[nr,nc] = size(data);

if nc>nr

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data = data';

end;

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Appendix C: Datasheets of the Components

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