13 Fatty Acid Catabolism 2014-2015

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    Fatty acid catabolism

    - Fatty acid is an excellent energy source- Fatty acids are packaged as triglycerides (= triacylglycerols)

    CH3(CH2)14COOH + 23O2 16CO2 + 16H2O

    Example: Palmitic acid C16 saturated fatty acid

    G' = -2340 kcal/mol

    (This is coupled to formation of 106 ATPs)

    - Fatty acid oxidation releases a tremendous amount of energy

    - Fatty acid oxidation generate reduced electron carriers and acetyl-CoAs

    - Fatty acids provide 80% of the energetic needs in heart and liver

    A triacylglycerol

    Glycerolbackbone

    acyl chain

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    Digestion of triacylglycerol

    Fatty acids

    Lipase

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    Conversion of glycerol to glycolytic metabolites:

    (DHAP)

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    Fatty acid activation

    - The acyl chain of fatty acid must be joined to co-enzyme A to becomesubstrates of the -oxidation enzymes in mitochondria

    - Enzyme: acyl-CoA synthetase

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    Transport of fatty acyl CoA into Mitochondria

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    -Oxidation of saturated fatty acids

    = acetyl CoA

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    Palmitic acid+ CoA-SH (Coenzyme A)

    -Oxidation of palmitic acid (C16:0)

    12

    12

    1

    2

    3

    QH2 Complex III

    Complex I

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    - Once the -ketone backbone is formed, it is possible for CoA-SH to attackthe carbonyl carbon, releasing acetyl-CoA:

    Next -oxidation cycle

    4

    12

    34

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    Overall changes:

    C16Fatty acid 7 -oxidation cycles 8 Acetyl-CoA

    - The product of each cycle of reactions become a substrate for the next cycle- A spiral pathway- Final cycle of -oxidation:

    CH3(CH2)2CO-S-CoA + CoA-SH 2 acetyl-CoA

    C 16

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    ATP Accounting for completion oxidation of C16:0

    - For each cycle of -oxidation: 1 FADH2 (1.5 ATP) + 1 NADH (2.5 ATP)= 4 ATPs

    - For palmitic acid (C16 saturated), 7 cycles of -oxidation are requiredto produce 8 acetyl-CoA

    - Number of ATPs derived from -oxidation: 7 x 4 = 28

    - For each acetyl-CoA entering the citrate acid cycle, 10 ATPs aregenerated (1 GTP, 1 FADH2, 3 NADH)

    - Number of ATPs derived from oxidation of acetyl-CoA: 8 x 10 = 80

    - Total number of ATPs from complete oxidation of palmitic acid: 108

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    CH3(CH2)14COOH + 23O2 16CO2 + 16H2O

    Example: Palmitic acid C16 saturated fatty acid

    (This is coupled to formation of 106ATPs) Why only 106 ATPs?

    - Fatty acid oxidation releases a tremendous amount of energy

    -ATP-consuming step:

    Palmitic acid + ATP + CoA-SH Acyl-CoA + AMP + 2Pi

    - Free energies of hydrolysis:G'

    ATP + H2O AMP + PPi -45.6

    PPi + H2O 2Pi -19.2

    _________________________________

    ATP + 2H2

    O AMP + 2Pi -64.8

    vs

    ATP + H2O ADP + Pi -32.8

    - Thus, energetically, the hydrolysis of 1 ATP to AMP is equivalent to the

    hydrolysis of 2 ATP to 2 ADP

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    ATP generation glucose vs fatty acids

    If we start from glucose:

    - Glycolysis to 2 pyruvate yields:2 ATP2 NADH

    - Conversion of 2 pyruvate to 2 acetyl-CoA:

    2 NADH

    - Oxidation of 2 acetyl-CoA in the TCA cycle:2 x 10 = 20 ATP

    Net yield = __________ ATP for complete oxidation of glucose to CO2

    [2 X 2.5 = 5 ATP]

    [2 X 2.5 = 5 ATP]

    32

    96 ATP for 3 glucose (18 carbons)

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    -For a C18 saturated fatty acid (18:0):

    8 cycles of -oxidation are required to produce 9acetyl-CoA

    -For each series of -oxidation: 1 FADH2(1.5 ATP); 1 NADH (2.5ATP)

    -Number of ATPs derived from -oxidation: 8x 4 = 32

    -For each acetyl-CoA entering the citrate acid cycle, 10 ATPs aregenerated (1 GTP, 1 FADH2, 3 NADH)

    -Number of ATPs derived from oxidation of acetyl-CoA: 9x 10 = 90

    -Net profit of ATPs from complete oxidation = 32 + 90 2 = 120

    vs. 96 ATP for 3 glucose (18 carbons)

    O id i f d f id

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    Oxidation of unsaturated fatty acids

    (substrate for enoyl-CoAhydratase)

    23

    4

    - 2 additional enzymes are required: enoyl-CoA isomerase, 2, 4-dienoyl-CoA reductase

    (1) Oxidation of monounsaturated fatty acid:

    Acetyl-CoA

    oxidation(last 3 steps)

    oxidation(4 full cycles)

    5 Acetyl-CoA

    1

    2

    3

    4

    (cis-3 to trans- 2 conversion)

    O id ti f t t d f tt id

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    Oxidation of unsaturated fatty acids

    (substrate for enoyl-CoA hydratase)

    2

    34

    - 2 additional enzymes are required: enoyl-CoA isomerase, 2, 4-dienoyl-CoA reductase

    Acetyl-CoA

    oxidation(last 3 steps)

    oxidation(4 full cycles)

    5 Acetyl-CoA

    1

    2

    3

    4

    TCA cycle 3 x 10 = 30 ATPs

    3 x 4 = 12 ATPs

    4 1.5 = 2.5 ATPs

    Step 1 is skipped(no FADH2 formation)

    4 x 4 = 16 ATPs

    TCA cycle 1 x 10 = 10 ATPs

    TCA cycle 5 x 10 = 50 ATPsNet ATP yield = 120.5 -2 (formation of acyl-CoA) = 118.5

    (1) Oxidation of monounsaturated fatty acid:

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    (2) Oxidation of polyunsaturated fatty acids:

    C

    O

    SCoA

    10

    4

    cis-4

    (substrate for enoyl-CoA hydratase)2

    3

    4 Acetyl-CoA

    oxidation(last 3 steps)

    4

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    C

    O

    SCoA

    10

    4

    cis-4

    First step of -oxidation cycle

    (acyl-CoA dehydrogenase)

    FAD

    FADH2

    (substrate for enoyl-CoA hydratase)

    1

    2

    3

    4Acetyl-CoA

    oxidation(last 3 steps)

    More oxidation cycles (full cycles)

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    (2) Oxidation of polyunsaturated fatty acids:

    C

    O

    SCoA

    10

    4

    cis-4

    (substrate for enoyl-CoA hydratase)2

    3

    4 Acetyl-CoA

    oxidation(last 3 steps)

    TCA cycle 3 x 10 = 30 ATPs

    3 x 4 = 12 ATPs

    cis-3 to trans- 2 conversion

    4 1.5 = 2.5 ATPs

    TCA cycle 1 x 10 = 10 ATPsStep 1 is skipped(no FADH2 formation)

    4

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    C

    O

    SCoA

    10

    4

    cis-4

    First step of -oxidation cycle

    (acyl-CoA dehydrogenase)

    FAD

    FADH2

    (substrate for enoyl-CoA hydratase)

    1

    2

    3

    4Acetyl-CoA

    oxidation(last 3 steps)

    [3 -oxidation cycles + releases of 4 acetyl CoAs]More oxidation cycles (full cycles)

    1.5 ATP

    -2.5 ATP [equivalent to 1 NADH]

    trans-3 to trans- 2 conversion

    4 1.5 = 2.5 ATPs

    TCA cycle 1 x 10 = 10 ATPsStep 1 is skipped(no FADH

    2formation)

    O id i f dd f id

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    Oxidation of odd fatty acids

    - Fatty acids with odd numbers of carbons are rare in mammals, but manyplants and bacteria do contain these lipids

    - Substrate of the last -oxidation is a 5-C acyl-CoA, giving rise to oneacetyl-CoA and one proprionyl-CoA (3-C unit)

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    How can succinyl-CoA be completely oxidized for ATP formation?

    F ti f k t b di

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    Formation of ketone bodies- During starvation, TCA cycle intermediates in liver are depleted by

    gluconeogenesis.- Acetyl-CoA released from fatty acid oxidation will be in excess- Ketone bodies are then formed

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    Ketone bodies: acetoacetate, acetone, -hydroxybutyrate

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    Ketone body formation and export from the liver:

    starvation

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    Utilization of ketone bodies

    - In non-hepatic tissues (brain, heart, kidney, skeletal muscle)

    - Under starvation conditions

    - Depletion of glucose supply

    absencein liver

    O id ti d l l t l i l t d

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    -Oxidation and glyoxylate cycle in plant seeds- In glyoxysomes organelles in developing seeds (fat reserves)- Plant mitochondria do not contain -oxidation pathway enzymes.- Acetyl-CoA produced by -oxidation enters the glyoxylate cycle to makesuccinate.

    - Succinate is exported to mitochondria for use as a TCA cycle intermediate or agluconeogenesis precursor.

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    The glyoxylate cycle

    - Most enzymes are same as thoseof the citric acid cycle

    - Two unique enzymes

    - One unique metabolite- Not in animals or humans

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    Conversion of lipids tocarbohydrates in plant seeds