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Intensive Course on Theoretical Chemistry and Computational Modelling
Universities: Perugia, Autonoma de Madrid, Paul Sabatier and Porto
Liquid State and Phase Transitions
Fernando M.S. Silva Fernandes
Department of Chemistry and Biochemistry
Centre for Molecular Sciences and Materials
Faculty of Sciences, University of Lisbon, Portugal
“Tamed, but not entirely domesticated, analytically intractable yet not to be coerced by approximation, liquid state physics has for a long time been the enfant terrible
of the phase diagram”
(in Introduction to Liquid State Physics, Clive Croxton, J.Wiley
& Sons, 1975)
After 35 years, multifarious difficulties still persist...
Liquids, contrary to solids and gases, do not have an ideal reference model. As such, a molecular theory for liquid sate or phase transitions usually starts from rigorous correlation and/or partition functions which, sooner or later, have to be tamed by analytical approximations and computer simulation techniques.
Real Liquids Model LiquidsSet up Models
Perform Experiments
Carry OutSimulations
Statistical MechanicalTheories
ExperimentalResults
Results forModels(Exact)
TheoreticalPredictions
Compare Compare
ModelsValidation
TheoriesValidation
Mechanical,dielectric and transport properties; Free Energies and chemicalpotentials; Phase transitions; Structure; Motion at molecular level; Predictionof properties not easily observed in laboratory.
Reduced Units
* 3
*
*
3*
1/ 2*
2
*
Density
Temperature
Energy
Pressure
Time
Force
Bk TT
EE
pp
t tm
ff
Summary
•
A phase transition is signaled by singularities in the free energies (Helmholtz or Gibbs) or in their derivatives.
•
If the free energies are continuous but first derivatives have finite discontinuities the transition is termed first-
order.
•
If the first derivatives are continuous but second derivatives are discontinuous or divergent (infinite) the transition is called higher order, continuous or critical.
Fundamentals
• In an equilibrium state the macroscopic properties are invariant on time.
•
During its time evolution the system goes through very many microstates, that is, it is subjected to thermal fluctuations.
•
There are very many microstates consistent with a given thermodynamic state (macrostate) identified by constraint variables.
•
The complete specification of a thermodynamic state leaves the microstates undefined.
Trajectory in state space (each box represents a different microstate)
1 2 1 2, ,..., , , ,..., , ,N N N N N NN N d dp r r r p p p r p r r p
Classical microstates (phase space). Solutions of classical equations of motion:
;N t r
Quantum microstates (Hilbert’s space). Solutions of quantum equations of motion (Schrödinger, Heisenberg or Dirac):
Dynamical (or mechanical) microscopic properties are defined for
each microstate: instantaneous energy, temperature, pressure, etc.
Statistical mechanics aims to establish a bridge between the macroscopic observable properties and the underlying microscopic
properties, by averaging the dynamical properties over the microstates consistent with preset thermodynamic constraints. Consider time and ensemble averages:
0
1 M
obs tmG G GM
2
1 2
NNi
insti i
E t Um
p r
( )obsnG G ergodic hypothesisM
obs enG P G G
Typical Ensembles
Ensemble Constraints
Microcanonical E, V, N Canonical T, V, N Isothermal - Isobaric T, p, N Grand - Canonical T, μ, V (μ is the chemical potential)
Trajectory in state space with each box representing a different state
13, , ! ,N N N N NE V N N h E H d d r p r p
, , , , /E V N E V N E
13, , ! ,N N N N NE V N N h E H d d r p r p
Constraints : E, V, N
(Phase space Volume)
(derivative of unit step function)
(Phase space density)
Generalized Boltzmann’s Equation
n Sn Xn dn Zn Yn
1 S1 (E,V,N) E drN dpN E
2 S2 (H,p,N) H - pV drN dpN dV H
3 S3 (L,V,) L + N drN dpN L
4 S4 (R,p, ) R - pV + N drN dpN dV R
S kn n/ ln n n n nZ X d H
n n nY / n n n nZ X d H
13N h N!
13N h N!
13
0 N h NN !
13
0 N h NN !
High Dimensional Geometry (sphere and spherical shell volumes)
ln , , ln , ,
nn
V rV A r nV r
S k E V N k E V N
In an imaginary world of high dimensionality there would be an automatic and perpetual potato famine, for the skin of a potato would occupy essentially its entire volume!
(H.B. Callen
in Thermodynamics and An Introduction to Thermostatistics)
Canonical Ensemble. Probability and Partition Functions
13, , ! exp ,N N N N NQ T V N N h H d d r p r p
exp ,, ,
, ,
N N N NH d dP T V N
Q T V N
r p r p
, , exp ii
Q T V N E
exp
, ,exp
i
ii
EP T V N
E
Thermodynamic Properties from Partition Function
, ,ln , ,
A T V NQ T V N
kT
,
ln , ,T N
p kT Q T V NV
,
ln , ,V N
S kT Q T V NT
,
ln , ,T V
kT Q T V NN
Structure and Correlation
24n rVg r
N r r
r g r
Radial distribution function (pair correlation function; pair distribution function)
Pair Correlation Function and Thermodynamics
2
0
3
0
3 42 2
46
NE NkT u r g r r dr
du rNkT Np g r r drV V dr
Potential of mean force
1 2
3 1,
1 3
1 21
... / exp...
... exp
ln , ln
NNfixed
N
d d dU d Ud Ud d d U
dkT g w r kT g rd
w r potential of mean force
r r
r r rr
r r r
r rr
From Introduction to Modern Statistical Mechanics, D.Chandler
Theories for g(r)
0lim 0
1
w r
u r
g r e
w r u r w r
w r
g r e O
For higher densities we have to deal with the deviations of ∆w(r)
from zero. In the most successful approaches ∆w(r)
is estimated in terms of ρg(r) and u(r),
yelding integral equations for g(r)
that are essentially mean field theories.
Ising
Model
1 2
1 2
1
1
1 1
1
; 1
, , ... exp
, ... exp ; 0, /
N
N
N
i j iij i
N
ii
N
i j is s s ij i
i js s s ij
Hamiltonian J s s H s s
M s
Q N H J s s H s
Q K N K s s H K J kT
Renormalization Group Theory
/ 2
1/ 2 1/8
1
1/ 4
0
0
, , / 2 ( )
3 ln cosh 4 /8
ln 2 cosh 2 cosh 4
ln1 cosh exp 8 / 34
1 1 ln 2exp 2 / 3 cosh 4 / 32 2
N
K K
K
Q K N f K Q K N Kadanoff transformation
K K K J kT
g K g K K K
Q Ng K
K K
g K g K K K
0
3 ln cosh 48
0.50698 ( ) 0.44069
C
K
K K K
C C
c C
K K
K RG K exact
Renormalization Group Theory Ising Model : T >=1.22TC
Adapted
from Statistical Mechanics of Phase Transitions, J.M.Yeomans
Renormalization Group Theory Ising Model : Critical Temperature
Adapted
from Statistical Mechanics of Phase Transitions, J.M.Yeomans
Renormalization Group Theory Ising Model : T <=0.99TC
Adapted
from Statistical Mechanics of Phase Transitions, J.M.Yeomans
Force Fields and Total Intermolecular Potential Energy
12 6
6 80
:
4
:
exp4
:
ijij ij
i j ij ijij ij ij
ij ij ij
N
iji j
Lennard Jones Potential
u rr r
Born Mayer Huggins Potentialq q c d
u r b B rr r r
Total Intermolecular Potential Energy
U u r
Polyatomics
Dynamics of a system of polyatomic molecules:•
Intramolecular: bond stretching, angle bending, torsion alongbonds and non-bonding interactions.
•
Intermolecular: translation and rotation.•
Translation as in monoatomics
(motion of mass centre).
•
Rotation as rigid rotors (Euler angles or equivalent).•
Translation and rotation: total of 6 degrees of freedom.
•
Intramolecular: as a first approximation (molecularmechanics) treated classically with force fields similar to
the
intermolecular ones
A Typical Force Field Energy
2
2
,0 ,0
12 6
1 1 0
1 cos2 2 2
44
N i i ni i i i
bonds angles torsions
N Nij ij i j
iji j i ij ij ij
k a vU l l n
q qr r r
r
Molecular Dynamics Method
Starting from a set of initial positions and velocities for the N molecules in the model, and taking into account the forces between molecules, the motion equations for each molecule are numerically integrated to produce a trajectory of the system in phase space.
2
2
'
ii i
d tt m
d tNewton s equation for molecule i
r
F
Thermal Properties
V3VTNk
p
:essurePrNk3
mT
:eTemperatur
rum21E
:EnergyTotal
N
jiijij
B
B
N
1i
2ii
N
1i
N
jiij
2ii
rF
v
v
Heat Capacity, Free Energy and Structure
22
2
1 0 0
2
3 ( )2
ln exp / ( )
ln /
( )4
v
exc test
U UC k heat capacity
kT
kT u kT excess chemical potential
A A A kT U kT
A Helmohltz free energy
n rVg r radial distribution functionN r r
Dynamic and Spectroscopic Properties
0
2
0
0 ( )
1 ( )3
0 ( )
lim ( )6
1 . 0 ( )
i i
i i
t
x x
z t t velocity autocorrelation function
D z t dt self diffusion cofficient
msd t t mean squaredisplacement
msd tD self diffusion coefficient
t
I t I dt electrical conductivitykTV
v v
r r
1
0
( )
1 . 0 cos
; ( ; )( )
Nx
x i ii
I t q v t elecric current
I f t f t dt
f dipole moment polarizability tensor IR Ramanf nuclear angular momentum NMR
Mean Square Displacement, KCl clusters (before and after freezing)
0
2
4
6
8
10 m
ean
squa
re d
ispl
acem
nt /
(ang
st.2
)
0 1 2 3 4 time / ps
liquid773 K
solid769 K
Phase Transitions – KCl Clusters
-680
-670
-660
-650
-640
-630
-620
-610
Con
fig. E
nerg
y / k
J.m
ol-1
0 200 400 600 800 1000 1200 Temperature / k
heating
cooling
IonicCluster64 ions
0.4
0.5
0.6
Rad
ius
of G
yrat
ion
/ box
uni
ts
0 200 400 600 800 1000 1200 Temperature / K
heating
cooling
IonicCluster 64 ions
Radial Density Functions, KCl clusters
0
20
40
60
80
100
rdf (
arbi
trary
uni
ts)
0 2 4 6 8 10 r / A
- +
+ +
heatingT=851Kbeforemelting
0
10
20
30
40
50
60
70
rdf (
arbi
trary
uni
ts)
0 2 4 6 8 10 r / A
- +
+ +
heatingT=861 Kaftermelting
Melting, Freezing and Glass Transitions, KCl clusters
-700
-680
-660
-640
-620
-600
-580
Tota
l Ene
rgy
/kJ.
mol
-1
0 200 400 600 800 1000 1200 temperature / K
slow heating slow cooling fast cooling
512 IonsCluster
Basics
2
1
, exp ,
exp ,
2
( ) :
exp32 exp
:
N N N N N N
N N N N
NNi
i
N N N
N N
idea
H H d dE
H d d
H U Hamiltonian of the systemm
Integrating out analytically the kinetic ideal part
U U dNkTEU d
In general
G G
p r p r p r
p r p r
p r
r r r
r r
exp
exp
N N N
l excess ideal N N
G G dG G
G d
r r r
r r
Canonical Configurational Average
... ( )exp ( )( )
... exp ( )
N N NN
N N
G U dG
U d
r r rr
r r
exp( )
... exp
NN
N N
U
U d
rr
r r
( ) ...N N N NG G d r r r r
Discretized Canonical Configurational Average
1
exp ( )( )
exp ( )M
U
U
1
1
( ) exp ( )( )
exp ( )
M
NM
G UG
U
r
1
( )M
NG G
r
Metropolis at canonical Monte Carlo
•
Choose M configurations with probability proportional to exp[-βU(rN)]
•
Weight them evenly:
1
1( ) ( )M
NG GM
r
How to choose?
Choosing configurations
•
N molecules enclosed in a cubic box of side L at any initial configuration
•
There exists a process (to be defined ahead) to move the molecules, generating M configurations (A,B,C,...) consistent with the available configurational space.
•
Transitions from state A to any other possible state, and vice-versa.
•
[A]=nA
/M; [B]=nB
/M (nA
,,
nB
–
number of states A and B) can be interpreted as “generalized concentrations of species A and B or the probabilities
of states A and B”:
1AB
BA
A B reversible process of st order
Choosing configurations
•
After many transitions a dynamic equilibrium should be reached:
AB BAeq eqA B
principleof microscopic reversibility
expexp
exp exp
AB
BAeq
BA
U BB BA A U A
U B U A U
General Scheme
underlying (trial) matrix; acceptance matrix1
/
1
min 1, /
' : ( ) 1/
B A
R
A B A B acc A Bacc
A B A B if B A
A B B A if B A
A A A B
acc A B B A
Metropolis first choice symmetric N
Phenol adsorption on gold electrodes
R.S.Neves;A.J.Motheo;F.M.S.S.Fernandes;R.P.S.Fartaria,J.Braz.Chem.
Soc., 15(2004)224-231.
1-decanethiol adsorption on gold electrodes
R.P.S.Fartaria;F.F.M.Freitas;F.M.S.S.Fernandes,J.Electroan.Chem.,574(2005)321-331.
Monte Carlo steps by Gibbs Ensemble method: particle displacement, volume rearrengement
and particle interchange
Gibbs Esemble: particle displacement and volume rearrangement Panagiotopoulos et al, Mol.Phys.,63(1988)527-545
Vapor-Liquid Equilibrium of Argon. Simulation with Nonadditive Potentials
S.P.J. Rodrigues;F.M.S.S.Fernandes, J.Phys.Chem., 98(1994)3917
Gibbs-Duhem integration method
( )
ln ( )
, 1
1 ; 12 2
cl
L V L Vc
c c
d hd vdp Gibbs Duhem equation
d p h Clapeyron equationd p v
S r SSP r u r
T TB AT T
D.A.Kofke, J.Chem.Phys., 98 (1993) 4149-4162
The subtlety of C60
F.M.S.S.Fernandes;F.F.M.Freitas;R.P.S.Fartaria, J.Phys.Chem.B, 2004, 108, 9251-9255
Thermodynamic Integration
2
1
2
1
2 1
2 1
2 1
1 1
, ,( )
, ,( )
, ; ,
B B B
T
B B BT
A T A T p d isothermNk T Nk T k T
A T A T E T dT isochoreNk T Nk T Nk T T
A T A T reference states of known free energies
Reference free-energy for solids: Einstein crystal method
0 0
2
0,1
0
1
, 1
, 1
'( )
N N N NS S S S
N
i ii
S Ein
B B B
Ein
U U U U
A T UA dNk T Nk T Nk T
A freeenergyof Einstein scrystal analytically knownseeFrenkel and Smit
r r r r
r r