View
1.800
Download
1
Category
Tags:
Preview:
DESCRIPTION
Citation preview
Explorable Microscopy
Bringing gigapixel imagery to the micro scale
Thursday, July 28, 2011
Changing the wayyou see
Thursday, July 28, 2011
GigaPans are from mars
(Venus is too cloudy for pictures)
Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Scanning ElectronMicroscope
Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Context and detail
Thursday, July 28, 2011
Thursday, July 28, 2011
An eye lash next to a dried blood sample (intern blood - Molly has turned out to be useful)
Red blood cells
Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Eutetramorium mocquerysi
http://www.gigapan.org/gigapans/28734/
Thursday, July 28, 2011
Thursday, July 28, 2011
Snow Algae
Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Assorted Pollen
Thursday, July 28, 2011
137045 ViewsMentioned onNew Scientist Blog
Thursday, July 28, 2011
400 Images, 280 Megapixels, 287,000 Views!
Thursday, July 28, 2011
Text
Over 500,000 views of ants!
When people can explore GigaPans
they (sometimes) start to care.
Thursday, July 28, 2011
Sweeter than Ants
Text
From left to right the sweeteners are Equal (dextrose, maltodextrin, and aspartame), Splenda (dextrose, maltodextrin, and sucralose), Sugar in the raw, and regular table sugar.
Thursday, July 28, 2011
Adapt Microscopes
Thursday, July 28, 2011
•CCD from a Canon Powershot at 1000x.
•170 individual photographs
•380 megapixels
Imaging the Imager
Thursday, July 28, 2011
Pixels!
Test/Calibration Area
Thursday, July 28, 2011
Flea by Jay Longson
5,640 images
Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Gene Cooper http://GigaMacro.com
Large Mosaic + Focus Stalking =
Huge numbers of images!
Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Passion Butterfly 1,790 individual photographs 1.37 gigapixels
Thursday, July 28, 2011
Passion Butterfly 1,790 individual photographs 1.37 gigapixels
Thursday, July 28, 2011
Thursday, July 28, 2011
Bees
Bee Frame test http://gigapan.org/gigapans/fullscreen/80976/
Thursday, July 28, 2011
Bees
Bee Frame test http://gigapan.org/gigapans/fullscreen/80976/
Thursday, July 28, 2011
Bees
Bee Frame test http://gigapan.org/gigapans/fullscreen/80976/
Thursday, July 28, 2011
Bees
Bee Frame test http://gigapan.org/gigapans/fullscreen/80976/
Thursday, July 28, 2011
Bees
Bee Frame test http://gigapan.org/gigapans/fullscreen/80976/
Thursday, July 28, 2011
Time Lapse Bees - Bleeding Edge http://timemachine.gigapan.org/wiki/Bees
Thursday, July 28, 2011
MakerBot as Imager
Thursday, July 28, 2011
MakerBot as Imager
Thursday, July 28, 2011
MakerBot as Imager
Thursday, July 28, 2011
MakerBot as Imager
Thursday, July 28, 2011
MakerBot as Imager
Thursday, July 28, 2011
Crab Shell - 200 megapixels, focus stacked, 1,560 images
Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
one thing.
Thursday, July 28, 2011
You. Now.
Thursday, July 28, 2011
Overview What we are doing Devices Tools and process Presentation, interaction Gigapixel imagery as Platform Exploring Time Series
Thursday, July 28, 2011
Scale Independent, Explorable Images
Thursday, July 28, 2011
Different Scales
Textile full image by Surangi - 110 megapixels http://gigapan.org/gigapans/64710/
Thursday, July 28, 2011
Focus Stacking ImageJ http://rsbweb.nih.gov/ij/
- “Like weaponized photoshop” Dan Kaminsky Extended Depth of Field Plugin for ImageJ
- http://bigwww.epfl.ch/demo/edf/ Zerene Stacker (commercial, but good) http://www.zerenesystems.com/ http://en.wikipedia.org/wiki/Focus_stacking
Thursday, July 28, 2011
Focus Stacking
Thursday, July 28, 2011
Focus Stacking
Thursday, July 28, 2011
Focus Stacking
Thursday, July 28, 2011
12 Bits
Fitz:
Do you want your board back now?
Thursday, July 28, 2011
Focus Stacking - Calibration
Thursday, July 28, 2011
Focus Stacking - HD Video Resolve 0.5 microns with a 40x objective. 1080 HD Video = 29.97two megapixel images per second. Split the frames
- qt tools by david van brink- http://omino.com/sw/qt_tools/
Normal Focus stacking
Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Microscope Adapter Kit
Thursday, July 28, 2011
Poor Orphans
Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Low cost Macro
Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Devices
NanoGigapan MacroBot Jay’s scope at NASA Microscope Adapter Kit Low Cost Macro MakerBot
Thursday, July 28, 2011
Presentation/Interaction Large images, raw mode, tif
GigaPan site PS2 controller, demo Modest Maps viewer TMS tiles, open layers
Share, explore, work with the images
Thursday, July 28, 2011
Platform for Gigapixel Applications Macro invertebrates http://www.mcaulifferegional.org/Expedition/bioticindex.html GigaPan feature annotation tool
Thursday, July 28, 2011
Best practices in using Gigapixel Imagery for Science
Provide Full ContextDisclosure- Time of acquisition- True color, color calibration- Scale: tools for measuring scale- Number of images, resolutionRaw images: focus stacking and stitching can introduce
artifacts. For computational photography the raw images are the data.
Thursday, July 28, 2011
Best practices in using Gigapixel Imagery for Science
Provide unprocessed images
Thursday, July 28, 2011
Best practices in using Gigapixel Imagery for Science
Thursday, July 28, 2011
When is the next Where. Explore and see what you find timelapse gigapans Time series and tiles Snacking Particulates
Thursday, July 28, 2011
Thursday, July 28, 2011
Recommended