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RELATÓRIO DE ATIVIDADES
2015
2
ÍNDICE
1. Caraterização e Objectivos do CIIMAR ................................................................... 5
Missão .......................................................................................................................... 5
Visão ............................................................................................................................. 5
Orgãos Sociais ............................................................................................................... 5
2. Estrutura Científica e Linhas Temáticas .................................................................. 6
3. Equipa de Investigação ......................................................................................... 9
4. Atividade de I&DT .............................................................................................. 10
Programa Integrado de IC&DT .................................................................................... 10
Projectos de I&DT de programas competitivos .......................................................... 12
Indicadores de Produtividade Científica ..................................................................... 12
Organização de Eventos Científicos ............................................................................ 14
5. Programas Horizontais ....................................................................................... 19
Ciência e Sociedade .................................................................................................... 19
Formação avançada .................................................................................................... 23
Blue Young Talent ....................................................................................................... 26
Redes Temáticas ......................................................................................................... 27
3
Transferência de Tecnologia ....................................................................................... 29
Suporte a Políticas Públicas ........................................................................................ 30
6. Financiamento ................................................................................................... 31
7. Prémios e Distinções .......................................................................................... 31
8. Anexos ............................................................................................................... 33
Anexo 1. Lista de projetos de I&DT obtidos via programas de financiamento
competitivo em curso em 2015............................................................................................... 33
Anexo 2. Lista de indicadores de produtividade científica realizados em 2015. ........ 33
4
Mensagem da Direção
O CIIMAR teve em 2015 um ano de
grandes desafios. Apesar do drástico corte
no financiamento plurianual da FCT, e de ter
sido o ano mais dificil do ponto de vista
financeiro decorrente dos atrasos de
reembolsos de várias entidades
financiadoras, conseguimos, com o apoio de
todos os associados, terminar o ano com
boas espetativas para 2016. Terminados os
projectos financiados pelo ON2 – ECORISK,
AQUAIMPROV, MARBIOTECH e
MARECON.PT, canditamo-nos, com sucesso
a projetos do NORTE 2020, tendo sido
financiados os projetos INNOVMAR
(NOVELMAR, INSEAFOOD, ECOSERVICES),
CORAL, MARINFO a iniciarem-se em 2016;
os projetos financiados pela FCT a executar
nos próximos 3 anos num total de 1.46 M e
conseguimos 4 projetos H2020. Tal
permitirá reforçar os recursos humanos de
pós-doutoramento e técnicos, contrariando
a escassez de bolsas da FCT. Foi aprovado
em 2015 pela A3ES o programa doutoral em
Biotecnologia Marinha e Aquacultura,
integrando a Universidade do Porto e a
Universidade do Minho. Em 2016
mudaremos finalmente para as novas
instalações no terminal de cruzeiros no
porto de Leixões, o que permitirá não só
realizarmos o desejo de estar junto ao mar,
como potenciará sinergias com outros
atores importantes ligados ao mar como a
APDL, IPMA, DOCAPESCA, UPTEC-MAR,
Conserveiras, Marisqueiras entre outros.
O CIIMAR continuará a ser a
referência da área do MAR na UPorto e
manterá a sua política de interação com
todas as unidades orgânicas e centros de
investigação da UPorto, reforçando a marca
MAR na nossa universidade.
Porto, 25 de Maio de 2016
Vitor Vasconcelos
Presidente da Direção CIIMAR
5
1. Caraterização e
Objectivos do CIIMAR
O CIIMAR é um centro de
investigação integrante do CIMAR –
Laboratório Associado, que agrega também
o CCMAR – Centro de Ciências do Mar da
Universidade do Algarve. O CIIMAR, para
além do núcleo baseado na Universidade do
Porto, possui ainda uma unidade na
Madeira, com personalidade jurídica
(CIIMAR-Madeira) e três grupos do IPMA-
Lisboa. Decorrente da reorganização dos
grupos de investigação da Universidade dos
Açores, o grupo sediado naquele
arquipelago foi obrigado a desligar-se do
CIIMAR. Na UPorto além da sede o CIIMAR
possui grupos de investigação em cinco
unidades orgânicas: Instituto de Ciências
Biomédicas Abel Salazar, Faculdades de
Ciências, Engenharia, Farmácia e Direito.
O CIIMAR contribui para uma
abordagem “Azul” da exploração dos
recursos marinhos com o fomento à
Investigação e Desenvolvimento
promovendo uma abordagem multi e
interdisciplinar tendo em conta os vários
aspectos do Oceano e da investigação
costeira. O CIIMAR tem como objetivo
investigar as ligações entre os processos
biológicos, químicos e físicos, contribuindo
para a compreensão do Oceano e
funcionamento dos seus ecossistemas, bem
como as respostas dos ecossistemas às
mudanças globais.
Missão
O CIIMAR é uma instituição de
investigação científica e de formação
avançada da Universidade do Porto. Tem
como missão o desenvolvimento de
investigação de excelência, a promoção do
desenvolvimento tecnológico e o apoio a
políticas públicas na área das Ciências do
Mar e Ambiente.
Visão
“O conhecimento do Oceano como
base para a gestão e exploração sustentável
dos recursos”.
Órgãos Sociais
Os atuais órgãos sociais do CIIMAR
iniciaram o mandato em janeiro de 2016, e
tem a seguinte constituição:
Assembleia Geral
Presidente: João José Oliveira Dias Coimbra
Vogais:
Aires Manuel Pereira Oliva Teles
Fernando Francisco Machado Veloso Gomes
Aurélia Maria de Pinho Marques Saraiva
6
Ana Paula de Campos Mucha
Direção
Presidente: Vítor Manuel de Oliveira e
Vasconcelos
Membros da Direção:
Luísa Maria Pinheiro Valente
Maria Natividade Ribeiro Vieira
Luís Filipe Costa de Castro
Miguel Alberto Fernandes Machado e
Santos
Conselho Fiscal
Presidente: Maria Luísa Machado Cerqueira
Bastos
Vogais:
José Fernando Magalhães Gonçalves
Maria Helena Tabuaço Rêgo Martins Peres
.
2. Estrutura Científica e
Linhas Temáticas
Portugal tem a maior ZEE da União
Europeia, em particular considerando a
projetada extensão da plataforma
continental. A gestão e exploração
sustentável deste recurso implicam riscos,
mas também numerosas oportunidades
ainda não exploradas. Mais de 1/3 da
população mundial vive em zonas costeiras,
dependendo também dos seus recursos e
serviços. No entanto, os recursos marítimos
e costeiros estão cada vez mais ameaçados
pelas alterações climáticas e o crescente
aumento da população humana. Atividades
como o transporte marítimo, a utilização
intensiva do solo, sobrepesca, lixo marinho,
a invasão de espécies não-nativas, poluição,
erosão costeira e degradação do habitat são
ameaças à sustentabilidade. Em contraste,
os usos futuros do Oceano trarão
oportunidades valiosas em áreas como a da
Aquacultura, Biotecnologia Marinha,
Energia Renovável, exploração do leito
marinho e Turismo. O "Plano de Ação
Atlântico" proposto pela Comissão Europeia
salienta o impacto sócio- económico
esperado destas atividades. As prioridades
do Horizonte 2020 em particular dos
Desafios Societais 2 e 5 serão os motores
chave do conhecimento e economia
relacionada com a investigação marinha.
A investigação do Centro está
organizada em três linhas temáticas:
Mudanças Globais e Serviços dos
Ecossistemas (Global Changes and
Ecosystems Services), Biologia, Aquacultura
e Qualidade dos Alimentos de Origem
Aquática (Biology, Aquaculture and Seafood
7
Quality) e Biotecnologia Marinha (Marine
Biotechnology), coordenadas
respetivamente pelos colegas Carlos Vale,
Luísa Valente e Vitor Vasconcelos.
Linhas Científicas Temáticas do CIIMAR 2014.
No final de 2015 o CIIMAR
encontra-se organizado em 10 grupos de
investigação, que incluem um total de 27
equipas.
8
9
3. Equipa de Investigação
O conjunto dos recursos humanos
do CIIMAR é constituído por cerca de 460
membros, incluindo investigadores e
pessoal técnico e administrativo.
O corpo de doutorados representa
uma fração significativa dos recursos
humanos do centro, com cerca de 47% do
total, correspondendo a 134 ETI
(Equivalentes a tempo integral).
Relativamente aos membros não
doutorados, 85% são estudantes envolvidos
em programas de formação avançada (dos
quais 40% são bolsieros de doutoramento).
O CIIMAR acolhe investigadores de 18
nacionalidades distintas.
10
4. Atividade de I&DT
Programa Integrado de IC&DT
Em 2015 foi concluído com sucesso
a implementação do programa integrado de
Investigação Cientifica e Desenvolvimento
Tecnológico denominado por MARVALOR –
Building research and innovation capacity
for improved management and
valorization of marine resources, que visou
o aumento da capacitação do centro em
matéria de investigação e inovação para
melhorar a gestão e valorização dos
recursos marinhos, apoiando a economia
do mar em Portugal e particularmente na
região Norte. O programa foi financiado
pelo ON.2 – Programa Operacional do Norte
(SAESCTN-PIIC&DT/1/2011) nos termos do
Regulamento Específico Sistema de Apoio a
Entidades do Sistema Científico e
Tecnológico, com um investimento total de
2,45 milhões de Euros, dos quais 1,9
milhões de Euros de financiamento FEDER.
Integrou três projetos estratégicos que
cobriram as principais linhas de investigação
do CIIMAR e ainda um projeto transversal
que visou maximizar o potencial económico
e social da investigação, realizado em
estreita parceria com a Universidade do
Porto Inovação.
Durante o ano de 2015, o CIIMAR
apresentou novas candidaturas ao Norte
2020 – Programa Operacional do Norte nos
termos do Regulamento Específico do
Domínio Competitividade e
Internacionalização – Sistema de Apoio à
Investigação Científica e Tecnológica (Aviso
Norte-45-2015-02).
A proposta individual denominada
por INNOVMAR – Innovation and
Sustainability in the Management and
Exploitation of Marine Resources. A
candidatura integra três linhas de
investigação distintas mas
complementares: NOVELMAR - Novel
marine products with biotechnological
applications; INSEAFOOD - Innovation and
valorization of seafood products: meeting
local challenges and opportunities e
ECOSERVICES - Assessing the environmental
quality, vulnerability and risks for the
sustainable management of NW coast
natural resources and ecosystem services.
O INNOVMAR tem como objetivo
principalidentificar novos produtos
marinhos com aplicações biotecnológicas,
mas também promover a inovação e
valorização dos produtos do mar, em
particular através da introdução de novas
espécies de aquacultura, e a avaliação da
11
qualidade ambiental, vulnerabilidade e
riscos para a gestão sustentável dos
recursos naturais da costa NW e serviços
dos ecossistemas. Pretende-se desta
forma consolidar a investigação do CIIMAR
e implementar ações estratégicas com
impacto nacional e regional, contribuindo
assim para o crescimento da economia azul.
O projeto foi contratualizado em 2016, com
um investimento total de 4,5 milhões de
Euros, dos quais 3,8 milhões de Euros de
financiamento FEDER.
Foram ainda apresentadas duas
propostas em co-promoção, positivamente
avaliadas e recomendadas para
financiamento: CORAL - Sustainable Ocean
Exploitation: Tools and sensors e MarInfo -
Integrated Platform for Marine Data
Acquisition and Analysis.
Os projetos foram contratualizados
no 1º trimestre de 2016, com um período de
execução de 1 de janeiro de 2016 a 31 de
dezembro de de 2018 (36 meses).
Designação projeto – ON.2 Coordenador
MARBIOTECH
Survey of natural substances from marine organisms with
potential pharmacological and ecological applications
Vitor Vasconcelos
ECORISK
Ecological risk assessment of oils and hazardous and noxious
substances in the NW Portuguese coast
Lúcia Guilhermino
AQUAIMPROV
Sustainable Aquaculture and Animal Welfare Aires Oliva-Teles
MARECON.PT
Translating marine science into products and services for
the Portuguese economy Susana Moreira
12
Designação projeto – NORTE2020 Coordenador
INNOVMAR
Innovation and Sustainability in the Management and
Exploitation of Marine Resources
Vitor Vasconcelos
RL1: NOVELMAR - Novel marine products with biotechnological
applications Vitor Vasconcelos
RL2: INSEAFOOD - Innovation and valorization of seafood
products: meeting local challenges and opportunities Luisa Valente
RL3: ECOSERVICES - Assessing the environmental quality,
vulnerability and risks for the sustainable management of NW
coast natural resources and ecosystem services
Lúcia Guilhermino
CORAL – Sustainable Ocean Exploitation: Tools and sensors Filipe Castro
MarInfo - Integrated Platform for Marine Data Acquisition and
Analysis Luisa Bastos
Projectos de I&DT de programas
competitivos
Em 2015, o CIIMAR teve em
execução financeira um total de 41 projetos
de I&DT, dos quais 26 como entidade
promotora, obtidos via programas
competitivos nacionais e internacionais. A
lista de projetos de I&DT em curso durante
o período em apreço encontra-se em anexo
a este relatório (Anexo 1).
Indicadores de Produtividade
Científica
Apesar dos drásticos cortes
financeiros, o CIIMAR manteve uma
produtividade científica elevada tanto ao
nível de publicações científicas
internacionais como ao nível da formação
avançada de recursos humanos (conclusão
de dissertações de doutoramento e
mestrado).
13
Indicadores de Produtividade Científica Nº
Publicações Internacionais 411
Edição de livros e capítulos de livros 25
Artigos em revistas indexadas (ISI-WoS e Scopus) 351
Atas em encontros científicos internacionais 27
Outras publicações internacionais 8
Publicações nacionais 3
Teses Concluídas 85
Teses de doutoramento 7
Teses de mestrado 78
Modelos 5
Aplicações computacionais 3
Patentes / Pedidos Provisórios de Patentes 2
Em 2015, foram identificadas 411
publicações internacionais com afiliação do
CIIMAR, resultando uma média de 3.1
publicações internacionais por ETI. Do total
de publicações internacionais, 351 referem-
se a artigos em revistas internacionais
14
indexadas (ISI-WoS e Scopus), resultando
uma média de 2.6 artigos em revistas
internacionais indexadas por ETI; uma
percentagem muito significativa (60%)
destes artigos foi publicada em revistas do
1º Quartil do SCImago Journal Ranking das
áreas científicas de atuação. Nos últimos 5
anos (2010-2015), o número de publicações
científicas internacionais e o número de
artigos em revistas indexadas (ISI-WoS e
Scopus) apresentaram um aumento de 83%
e 81%, respetivamente.
Em relação aos restantes
indicadores de produtividade científica,
verificou-se a produção de modelos e
aplicações computacionais e foram ainda
submetidos dois Pedidos Provisórios de
Patente (PPPs) que se encontram
atualmente em fase de conversão para
Pedido de Patente de Invenção definitivo
com extensão internacional (PCT, Patent
Corporation Treaty). O aumento destes
indicadores em relação a anos transatos
reflete um maior envolvimento do CIIMAR
na promoção da aplicação de resultados da
investigação na economia.
A lista de indicadores de
produtividade científica referente a 2015
encontra-se em anexo a este relatório
(Anexo 2).
Organização de Eventos Científicos
Em 2015, o CIIMAR organizou ou
coorganizou um elevado número de
eventos científicos, apresentando-se de
seguida uma lista dos eventos mais
relevantes. O CIIMAR tem em curso um
Ciclo de Seminários Internos (Oceanus
Seminars) que inclui palestras de membros
do centro e de investigadores estrangeiros
convidados. Para além dos seminários
englobados neste ciclo foram igualmente
organizadas um número significativo de
outras palestras.
15
CONFERÊNCIAS / WORKSHOPS INTERNACIONAIS
Workshop “Airborne Gravity – comparison of strapdown and scalar techniques”
Organização: CIIMAR, FCUP
12-13 maio, Observatório Astronómico, Vila Nova de Gaia
MARSAFENET Open Conference on Maritime Safety and Environmental Protection in Europe.
Multiple layers in regulation and compliance
Organização: CIIMAR, FDUP (em colaboração com Utrecht University, University of Tromso)
23 de maio, FDUP, Porto
Marine socio-economic analysis in the Atlantic Area
Organização: CIIMAR
28 de maio, Exponor, Leça da Palmeira
MARVALOR - Building research and innovation capacity for improved management and
valorization of marine resources
Organização: CIIMAR
29 de maio, Exponor, Leça da Palmeira
Workshop MUSOC - Multi-Scale Ocean Circulation System
Organização. CIIMAR
11-14 agosto, Funchal, Madeira
1st International Marine Science Communication Conference (IMSCC 2014)
Organização: CIIMAR, EMBCP, Ciência Viva
8 - 9 setembro, Porto
VII Simpósio Ibérico sobre a bacia hidrográfica do Rio Minho
Organização: CIIMAR, Aquamuseu do Rio Minho
7 e 8 de novembro, Vila Nova de Cerveira
16
CONFERÊNCIAS / WORKSHOPS / FEIRAS DE CARÁCTER INTERNACIONAL
XX Cryptogamic Botany Symposium
Organização: CIIMAR & CIBIO
22 a 25 de julho, HF Tuela Porto, Porto
XV European Congress of Ichthyology
Organização: CIIMAR
7 a 11 de setembro, Hotel HF Ipanema Park, Porto
Coast action: Advancing knowledge on seaweed growth and development
Organização: CIIMAR & Alga +
17 – 18 de setembro, CIIMAR
Participação na Blue Week
Organização: Governo de Portugal
4 a 6 de junho, FIL, Lisboa
Participação no Fórum do Mar
Organização: Oceano XXI
16 a 19 de novembro, Exponor, Leça da Palmeira
CONFERÊNCIAS / WORKSHOPS NACIONAIS
Workshop | Comercialização de tecnologias e orientação da investigação para o mercado -
Empreendedorismo e criação de Spin-offs
Organização: CIIMAR
19 de janeiro, CIIMAR
Conferência | MARBIOTECH
Organização: CIIMAR
25 de maio, CIIMAR
Workshop | ECORISK
Organização: CIIMAR,
12 de junho, CIIMAR
Workshop | “Aquacultura em Portugal – Desafios e Oportunidades
Organização: CIIMAR & INESC TEC
25 de junho, Porto
Workshop| Pathology of Aquatic Organisms
Organização: CIIMAR
17
16 de julho, CIIMAR
Workshop | Principles of Environmental Toxicology and Contamination
Organização: CIIMAR
25 de setembro, CIIMAR
Aquaculture Research Workshop
Organização. CIIMAR & FCUP
18 de dezembro, FCUP, Porto
OCEANUS SEMINARS / OUTROS SEMINÁRIOS ORADORES
Biodegradation of fluorinated environmental pollutants
16 de março
Maria de Fátima
Carvalho, CIIMAR
The role of replication and transcription in mitochondrial DNA
evolution
30 de março
Miguel M. Fonseca,
CIBIO
Valorisation of Marine Resources and By-products Envisaging
Biomedical Applications
13 de abril
Joana Moreira-Silva, 3
B´s
CIIMAR Science outreach projects and strategy
27 de abril José Teixeira, CIIMAR
Zebrafish sex: more questions than answers
11 de maio Ana Coimbra (UTAD)
The Weight of Evidences approach in the risk assessment of sites
contaminated with radioactive ore
26 de maio
Ruth Pereira, CIIMAR
The impact of multiple stressors (natural and anthropogenic) on the
coastal communities’ structure and functioning
8 de junho
Patricia Cardoso,
CIIMAR
Unravelling the role of non-B DNA conformations in phylogeny,
evolution and disease
22 de junho
João Carneiro, CIIMAR
Patterns of benthic assemblages invaded and non-invaded by the
red seaweed Grateloupia turuturu in north of Portugal
20 de junho
Crisitano Freitas, FCUP
18
The ecology of tropical anemonefishes and their giant host sea
anemones
13 de setembro
Mike Arvedlund, Reef
Consultants
The quality management system in research laboratories: from
rejection to acceptance
16 de dezembro
Gisselle Perez, Cuba
Fantasmas do Litoral Norte
17 de dezembro
Vasco Ferreira, Forum
Esposendense
19
5. Programas Horizontais
A tradução da investigação
científica em benefícios tangíveis para a
sociedade é um objetivo importante que é
perseguido através da implementação de
cinco programas transversais: 1) Ciência e
Sociedade; 2) Formação avançada; 3) Redes
temáticas; 4) Transferência de tecnologia; 5)
Suporte a políticas públicas.
Ciência e Sociedade
O CIIMAR desempenha um papel de
relevo na formação e promoção da
educação científica e tecnológica na
sociedade portuguesa, de forma a melhorar
o conhecimento e a perceção pública da
ciência e a aumentar o interesse dos jovens
estudantes para as carreiras científicas.
Projetos de literacia científica
Em 2015, foram aprovados três
novos projetos de literacia dos
Oceanos (Cadeias Tróficas
Marinhas – Conhecer para
Comunica; Mar de Plástico e
OceanLab - Protegendo os
Oceanos: vem ao laboratório fazer
connosco!), financiados ao abrigo
do Programa PT02 – Gestão
Integrada das Águas Marinhas e
Costeiras das EEA Grants. Os
projetos têm como objetivo elevar
a consciência e o conhecimento
sobre questões marinhas através
de ações de sensibilização e de
formação no domínio da gestão
marinha integrada e dar apoio à
Direção-Geral da Política do Mar
(DGPM) na implementação da
Diretiva-Quadro da Estratégia
marinha (DQEM).
- “MoBIDiC – Escola na Praia”,
financiado pela Ciência Viva, um
programa de Monitorização da
Biodiversidade Intertidal e
Divulgação Científica que visa a
recolha de dados de vida marinha
nas praias rochosas do Norte de
Portugal.
“CIIMAR na Escola”, financiado
pela Ciência Viva, disponibiliza
gratuitamente a professores e
educadores, através de uma
plataforma online, um conjunto de
protocolos experimentais e uma
oferta de palestras a realizar na sala
de aula para alunos do ensino
básico e ensino secundário.
“Charcos com Vida”, tem como
objetivo contribuir para o
20
conhecimento da biodiversidade e
importância dos charcos, bem
como sensibilizar e mobilizar a
comunidade escolar para a
exploração pedagógica e
preservação destes habitats,
enquanto importantes
reservatórios de biodiversidade e
laboratórios vivos. Através de uma
plataforma online
(www.charcoscomvida.com)
disponibilizam-se gratuitamente
um conjunto alargado de
conteúdos informativos, protocolos
de atividades práticas
experimentais e uma base de dados
de inventário de charcos a nível
nacional. Durante 2015 foram
realizadas 42 atividades práticas
que envolveram aproximadamente
de 1265 alunos e realizadas 7 ações
de formação especializada,
envolvendo 101 formandos.
Durante esse período foram
construídos 13 novos charcos para
a biodiversidade e a Exposição
esteve patente em 3 novas cidades-
Vila do Conde, Sintra e Barreiro.
Para além disso foi restabelecida a
parceria com o Jardim Botânico do
Porto, com o desenvolvimento de
um Viveiro de Plantas Aquáticas, e
com a Câmara Municipal do Porto
com o desenvolvimento da
iniciativa "Há Charcos na Cidade do
Porto". Foi ainda realizada uma tese
de Licenciatura em Biologia
Aplicada, em parceria com a
Universidade do Minho.
CMIAs – Centros de Monitorização
e Interpretação Ambiental
A nível regional são de particular
importância os protocolos de colaboração
com as Câmaras Municipais de Vila do
Conde e de Matosinhos para a gestão
científica e tecnológica dos seus respetivos
Centros de Monitorização e Interpretação
Ambiental.
CMIA de Vila do Conde
O CMIA de Vila do Conde tem como
objetivo a monitorização de descritores
ambientais, mas também uma boa
interpretação e divulgação dos valores,
recursos e problemáticas adjacentes ao
meio ambiente, visando desenvolver cada
vez mais as suas capacidades de
comunicação junto da sociedade. Para tal,
apresenta uma estratégia na área da
divulgação de ciência que assenta na
21
promoção de diversas atividades, que visam
chegar a público-alvo distintos, de modo a
desenvolver o espírito-crítico dos
participantes, com o objetivo de despertar
para as problemáticas ambientais, tanto no
espaço onde os nossos visitantes se
inserem, como a nível global, capacitando-
os para compreender e superar as suas
limitações e possibilidades de acção.
Durante o ano de 2015, estiveram patentes
no CMIA de Vila do Conde duas exposições:
“Anfíbios: uma pata na água, outra na terra”
e “Faz da mudança a tua praia”. Decorreram
ao longo de todo ano inúmeras atividades
(nomeadamente palestras, semanas
temáticas, oficinas, percursos exploratórios,
jogos lúdico-pedagógicos e exposições
itinerantes), envolvendo diversas
instituições dentro e fora do concelho num
total de 56 097 participantes.
Enquanto promotor de literacia
ambiental e comunicador de ciência, o
CMIA participou nos congressos SciCom
Portugal, III Congresso Internacional de
Educação Ambiental 2015 e 14th Deep-Sea
Biology Symposium referências nas áreas da
educação, investigação, conservação da
natureza e comunicação em ciência, por
forma a conseguir de forma mais eficiente,
levar a cabo um trabalho cada vez mais
consciente. O CMIA de Vila do Conde esteve
ainda envolvido na formação profissional e
académica, recebendo um total de 18
estagiários, alunos de cursos de formação
profissional e de licenciatura. A equipa do
CMIA ainda procedeu à realização de 3
campanhas de monitorização dos rios e das
ribeiras do concelho de Vila do Conde. E o
carácter variado e multidisciplinar das
nossas atividades, não só requerem da
equipa um atualizar constante de
conhecimentos, como também a capacita
de forma significativa, a ponto do
contributo da sua experiência ser
importante para outros grupos de
investigação e comunicação de ciência, com
os quais consegue trocar vivências e
conhecimentos por onde vai marcando
presença.
CMIA de Matosinhos
No ano de 2015 ocorreu o
encerramento das instalações do CMIA de
Matosinhos, por motivo de obras e
mudança de espaço, tendo sido o ano de
preparação e reabertura das novas
instalações do CMIA de Matosinhos. A
inauguração do novo espaço ocorreu no dia
23 de julho de 2015, pelas 11h, com a
presença do Ex.mo Sr. Presidente da CMM,
o Dr. Guilherme Pinto.
22
Durante o ano de 2015, esteve
patente a Exposição “Mar Sem Fim: A
Derradeira Aventura da Exploração
Oceânica” onde foram realizadas atividades
lúdico-pedagógicas sobre o tema
apresentado, que serviram de
complemento às visitas guiadas às
exposições. Em simultâneo com a exposição
foram realizadas palestras, oficinas e
diversas atividades educativas regulares em
ambiente laboratorial e de campo para
público escolar de diferentes níveis etários,
envolvendo no total de 19 instituições e
1712 participantes.
O Cmia de Matosinhos participou
no evento mundial OSD (Ocean Sampling
Day) e no programa educativo da Ciência
Viva no Verão assim como nas atividades da
Bandeira Azul nas praias do Concelho de
Matosinhos.
A Equipa técnica do CMIA colaborou
com o projeto “O Ciimar na Escola” em
diferentes atividades sempre que solicitado.
O CMIA de Matosinhos apoiou o III
Congresso de Formação e Inovação de
Matosinhos que decorreu nas instalações
do CMIA de Matosinhos.
Aquários Públicos e Museus
A Estação Litoral da Aguda- ELA
(www.fundacao-ela.pt, ca 50000 visitantes /
ano) e o AquaMuseu do Rio Minho (ca
30000 visitantes / ano), dois equipamentos
que apresentam uma particular relevância
no que diz respeito à implementação de
Programas de Educação Ambiental, são
geridos por investigadores do CIIMAR. No
caso do AquaMuseu do Rio Minho, existe
um protocolo de colaboração entre o
CIIMAR e a Câmara Municipal de Vila Nova
de Cerveira.
Organização/ Participação em
eventos para a comunidade e público
escolar
O CIIMAR implementou e
participou vários tipos de atividades de
forma a contribuir para a promoção de uma
cultura científica e tecnológica e, mais
especificamente, para incentivar o uso de
métodos experimentais na aprendizagem
da ciência, envolvendo tanto a comunidade
científica como a comunidade escolar e o
público em geral. Destacam-se as seguintes:
Implementação do projeto
“ComCiência” (realização de
palestras nas Escolas por
investigadores do CIIMAR) iniciado
em 2014, como resultado de uma
23
parceria entre a Câmara Municipal
do Porto e o CIIMAR;
Participação do CIIMAR no
“PROJETO SEI”, da Câmara Municipal
do Porto. O projeto consistiu em
elaborar uma atividade
experimental ao longo de 6 meses
com uma turma do 8º ano da Escola
Leonardo Coimbra. O trabalho final
foi apresentado pelos alunos sob a
forma de uma apresentação oral e
de um poster em abril de 2015 na
Biblioteca Almeida Garret;
Realização de atividades
experimentas no Centro Ambiental
de Esposende
Participação na 13ª Mostra de
Ciência, Ensino e Inovação da
Universidade do Porto (12 a 15 de
março);
Participação na feira “Qualifica” na
Exponor no dia 10 de abril de 2015
Participação na “feira de Ciência”
organizada pelo Ciência Viva de Vila
do Conde, entre os dias 7 e 10 de
maio de 2015 em Vila do Conde
Participação no Evento “Aqua Porto”
nos dias 2 e 3 de outubro de 2015 no
Pavilhão da Água
Atividade “30 minutos de conversa
com um cientista” - no âmbito da
comemoração da Semana da Ciência
e da Tecnologia, entre os dias 24 e 27
de novembro, realizaram-se 15
palestras por investigadores do
CIIMAR em escolas da área
metropolitana do Porto, envolvendo
cerca de 653 estudantes.
Realização de um “Dia Aberto no
CIIMAR”, no dia 28 de novembro, no
âmbito da comemoração da Semana
da Ciência e da Tecnologia, com
diversas atividades experimentais e
visitas aos laboratórios.
Formação avançada
O CIIMAR é uma instituição
de referência na formação avançada de
investigadores em Ciências do Mar e
Ambiente, apoiando diversos cursos de
mestrado e programas doutorais a nível
nacional e europeu.
24
Cursos Mestrado Diretor
Mestrado Ciências do Mar – Recursos Marinhos
ICBAS / UP Eduardo Rocha
Mestrado em Recursos Biológicos Aquáticos
Faculdade de Ciências / UP Aires Oliva-Teles
Mestrado em Biologia e Gestão da Qualidade da Água
Faculdade de Ciências / UP Maria Natividade Vieira
Mestrado em Contaminação e Toxicologia Ambientais
ICBAS / Faculdade de Ciências /UP
Vitor Vasconcelos/Lúcia
Guilhermino
Erasmus Mundus MSc in Marine Biodiversity and
Conservation
Consórcio de 6 universidades europeias
Participação através do CIMAR-
LA
Programas Doutorais Diretor
Responsável CIIMAR
Programa Doutoral em Ciências do Mar e Ambiente
Universidade Porto / Universidade Aveiro / Universidade Algarve
CIMAR / CESAM
Lúcia Guilhermino
Programa Doutoral em Ciência Animal
ICBAS / Universidade Porto Luísa Valente
Programa Doutoral em Ciência Animal
SANFEED - Sustainable Animal Nutrition and Feeding
ICBAS / REQUIMTE / CIIMAR / Universidade Porto
Empresas: AGROS, ALGA+, Altech, CAVC, INVIVONSA PORTUGAL, S.A,
Permix Lda., Sea8, Sense Test, Soja de Portugal, SPAROS
(Financiado pela FCT)
Luísa Valente
Doctoral Programme MARES
Marine Ecosystem Health and Conservation
Consórcio de 24 parceiros europeus
Participação como
parceiro associado –
Eduardo Rocha
Programa Doutoral em Biotecnologia Marinha e Aquacultura
FCUP / ICBAS / Universidade do Minho Vitor Vasconcelos
25
Em 2015, no que respeita à
formação de recursos avançados, foram
concluídas 7 teses de doutoramento e 78
teses de mestrado sob orientação ou
coorientação de membros do CIIMAR.
O Programa Doutoral SANFEED –
Sustainable Animal Nutrition and Feeding
foi aprovado para financiamento pela FCT
em 2014, sendo um programa doutoral co-
financiado por empresas. A 1.ª edição teve
início no ano letivo de 2015/2016. O
programa doutoral em Biotecnologia
Marinha e Aquacultura, idealizado pelo
CIIMAR, foi aprovado pela A3Es. Este
programa é co-titulado pela UPorto e
UMinho, tendo além do CIIMAR a
participação do IBMC e REQUIMTE (U.
Porto) e do CEB e 3Bs (U. Minho).
Foram ainda organizados vários
cursos de formação avançada.
Cursos de formação avançada
Manipulação e Análise de Informação Geográfica (SIG)
Organização: CIIMAR
22 de maio a 1 de junho, CIIMAR
Curso: Introductory statistics and programming with R for biological sciences
Organização: CIIMAR
8 a 15 de junho; 30 de nov a 4 de dez; 7 – 11 de dezembro, Porto
Curso Ciências em Animais Laboratório – Organismos Aquático (CAL-AQUA)
Organização: Biotério de Animais Aquáticos (BOGA), CIIMAR
9 - 13 de fevereiro; 4 – 8 de maio; 3 - 7 novembro, CIIMAR
Proteomics course
Organização: CIIMAR e I3S
15 – 17 de junho, Porto
Planeamento de programas de monitorização de biodiversidade marinha
Organização: CIIMAR
22 a 26 de junho, CIIMAR
26
Hands-on NMR
Organização: CIIMAR
14 - 17 de julho, CIIMAR
Amostragem e Identificação de Parasitas de Espécies Marinhas
Organização: CIIMAR e I3S
9 a 11 de setembro, CIIMAR
Nursery Ground Ecology
Organização: CIIMAR
14 – 18 de setembro, CIIMAR
Monitorização do Meio Marinho por Satélite
Organização: CIIMAR
21-25 de setembro, CIIMAR
Técnicas Analíticas em LC-MS/MS
Organização: CIIMAR
22 -25 de setembro, CIIMAR
Metodologias de Amostragem e Identificação de Comunidades Bentónicas Marinhas
Organização: CIIMAR
26 -27 de setembro, CIIMAR
Blue Young Talent
Em 2015, o CIIMAR lançou a
2.ª edição do programa BYT – Blue Young
Talent, um programa pré-graduado de
captação de talentos na área das ciências e
biotecnologias marinhas e ambientais, em
parceria com a indústria e PMEs. O BYT é um
programa de estágios remunerados que
tem como objetivo proporcionar aos
melhores alunos do primeiro ciclo da
Universidade do Porto uma formação pré-
graduada em ambiente científico de
excelência. Na edição 2015/2016 foram
selecionados 9 estudantes de diferentes
cursos da Universidade do Porto, que
tiveram a oportunidade de integrar equipas
de investigação do CIIMAR onde
desenvolveram trabalho científico durante
27
10 meses nas áreas da biotecnologia
marinha, biologia molecular, ecologia,
aquacultura e nutrição. A 2.ª edição contou
com a participação de 18 empresas. O
programa BYT 2015/2016 contemplou ainda
um plano de formação integrador
envolvendo os jovens BYTs em atividades
técnico-científicas, de empreendedorismo
na área do Mar bem como de divulgação de
ciência.
Redes Temáticas
Um dos objetivos do CIIMAR passa
pela internacionalização das suas atividades
de investigação e desenvolvimento
tecnológico. Este objetivo tem sido
alcançado através de um número crescente
de colaborações (nomeadamente com
instituições europeias, dos USA, do Brasil e
da Tailândia) e projetos em conjunto com
instituições internacionais de reconhecido
prestígio, assim como pela participação em
redes e plataformas internacionais.
Marine Board - European Science
Foundation
O CIIMAR mantém um
envolvimento ativo na integração e no
desenvolvimento das Ciências Marinhas na
EU. Através do LA integra o Marine Board da
European Science Foundation, uma rede
que visa facilitar uma maior coordenação
entre as principais organizações europeias
(conselhos de investigação, agências de
financiamento e institutos de investigação
de excelência) e o desenvolvimento de
estratégias para a I&D marinha e marítima
na Europa.
Quadro de I&DT – Ações de
coordenação / redes de excelência
MarBEF + - Marine Biodiversity and
Ecosystem Functioning;
Rede de Centros de Investigação e
Divulgação de Ciência
MARS - European Network of
Marine Research Institutes and
Stations
Campus do Mar – International
Campus of Excellence
ECSITE - European Network of
Science Centers and Museums
ECSA – European Citizen Science
Association
Plataformas Internacionais e
nacionais
28
EPBRS - European Platform for
Biodiversity Research Strategy
EUROMARINE Consortium -
Integration of European Marine
Research Networks of Excellence
Bluebio Alliance- CIIMAR é membro
da comissão executiva.
Ações COST – European Science
Foundation
Action FA1004 - Marine Fish
Conservation Physiology (Grant
holder: Jonathan Wilson)
Action ES1003 - EMBOS -
Development and implementation
of a pan-European Marine
Biodiversity Observatory System.
(Vice-chair: Isabel Sousa Pinto)
ES1105 - Cyanobacterial blooms
and toxins in water resources:
Occurence, impacts and
management
IS1105 - Network of experts on the
legal aspects of maritime safety and
security (MARSAFENET)
TD0903 - Understanding and
manipulating enzymatic and
proteomic processes in
biomineralization - towards new
biomimetic strategies, the creation
of tailored nano-scale architectures
and environmental monitoring
FA1301 - A network for
improvement of cephalopod
welfare and husbandry in research,
aquaculture and fisheries
(CephsInAction)
FA1406- Advanced knowledge on
seaweed growth and development
ES1302 - European Network on
Ecological Functions of Trace Metals
in Anaerobic Biotechnologies
ES1307 - Sewage biomarker analysis
for community health assessment
COST FA1306 – The quest for
tolerant varieties: phenotyping at
plant and cellular level
FA1406 - Advancing knowledge on
seaweed growth and development
29
Membros de Grupos de Trabalho de
Organizações Internacionais (exemplos)
ICES – International Council for the
Exploration of the Sea: WG Habitat
Mapping; WP Biological Effects of
Environmental Contaminants (Lúcia
Guilhermino); WG on Resilience
and Marine Ecosystem Services
(Isabel Sousa Pinto, Sandra Ramos);
WG on Eels (José Carlos Antunes);
Workshop on Lampreys and Shads
(José Carlos Antunes), Workshop of
a Planning Group on the Monitoring
of Eel Quality (Aurélia Saraiva);
GEO BON - WG Marine Ecosystem
Change (Isabel Sousa Pinto:Co-
Chair WG, Implementation
Committee);
SETAC – Society of Environmental
Toxicology and Chemistry: WG
Extreme Stress Events and
Ecosystem Recovery; SETAC Europe
Certification of Environmental Risk
Assessors Registration Committee;
SETAC Global Soils Advisory Group,
SETAC Global Nanotechnology
Advisory Group, SETAC Global
Ecosystem Services Advisory Group
(Lúcia Guilhermino);
Transferência de Tecnologia
Desde de 2013, o CIIMAR possui
uma plataforma com o objectivo de reforçar
a capacidade do centro para contribuir
ativamente na dinamização da Economia do
Mar, e fazer face aos desafios societais e ao
plano estratégico de desenvolvimento da
região norte, o CIIMAR esteve na génese da
plataforma de serviços e inovação -
Marinnova (www.marinnova.pt).
Por forma a maximizar o potencial
socio-economico dos resultados de
investigação, o Gabinete de Gestão de
Ciência e Tecnologia (GGCT), foi reforçado
com um membro especializado para o apoio
aos processos de transferência de
tecnologia. Desde 2104, o gabinete
apresenta competências na valorização dos
resultados de I&D, na gestão de
propriedade intelectual e nas atividades de
ligação às empresas potenciando projetos
em co-promoção.
Em resultado, no ano de 2015, o
GGCT prestou apoio na submissão de dois
Pedidos Provisórios de Patente.
30
O CIIMAR é parceiro no OCEANUS
Research and Innovation, da Universidade
do Porto, tendo Vitor Vasconcelos sido
nomeado seu presidente, e sendo membros
da sua comissão diretiva as associadas do
CIIMAR, Isabel Sousa Pinto e Luísa Valente.
Em 2015, o CIIMAR esteve
representado no Blue Business Forum (Blue
Week Lisbon 2015), de 4 a 6 de junho em
Lisboa e no Fórum do Mar, de 16 a 19 de
novembro em Leça da Palmeira.
Suporte a Políticas Públicas
O CIIMAR está fortemente
envolvido na implementação da Directiva
Quadro da Estratégia Marinha (DQEM) em
Portugal, tendo sido convidado pela
entidade coordenadora, a Direção-Geral de
Recursos Naturais Segurança e Serviços
Marítimos (DGRM), a integrar vários grupos
de trabalho com vista à elaboração do plano
de monitorização e plano de medidas
relativo ao período 2015-2020. O plano de
Monitorização e medidas para a subdivisao
Continente foi submetido por Portugal em
julho de 2014, estando previsto para breve
a sua implementação, que contará com o
envolvimento de várias equipas do CIIMAR.
Ainda relacionado com a
implementação da DQEM, o CIIMAR é
coordenador e/ou parceiro de vários
projetos financiados pelas EEA Grants ao
abrigo do Programa “PT02 - Gestão
Integrada das Águas Marinhas e Costeiras",
operado pela Direção-Geral de Poliítica do
Mar (DGPM). Na área da educação e
formação, destaca-se o projeto BioMar.PT -
Aprender a conhecer o ambiente marinho
de Portugal. Este projecto, coordenado pelo
IPMA e com a participação da EMEPC, tem
como objetivo contribuir para qualificar
recursos humanos através de ações em
áreas científicas e tecnológicas prioritárias à
gestão sustentável das águas marinhas.
No âmbito de projetos de
colaboração territorial, o CIIMAR colabora
ainda com diversas entidades regionais e
nacionais tais como a DGAM – Direção Geral
da Autoridade Marítima, que pretendem
garantir a segurança marítima, a qualidade
ambiental e saúde pública.
A nível internacional, Isabel Sousa-
Pinto é ponto focal e chefe da delegação
nacional no IPBES - Intergovernmental
Science Policy Platform on Biodiversity and
Ecosystem Services.
Vitor Vasconcelos é membro do
Conselho Científico das Ciências Naturais e
do Ambiente da FCT.
31
6. Financiamento
Em 2015, o financiamento total obtido pelo
CIIMAR foi de 4,08 M de euros. O
montante de financiamento obtido via
programas nacionais e internacionais foi de
3.8 M de Euros, representando 80,78 % do
orçamento total do centro.
Os contratos de prestações de serviços
têm ainda pequena expressão no
orçamento total do CIIMAR (10,32%),
sendo no entanto de registar um aumento
de 107,30 % face ao ano anterior. Para a
rubrica outros rendimentos e ganhos, que
representa 8.9% do orçamento total, tendo
uma variação positiva em relação a 2014
de 23,32 %, contando com a contribuição
dos juros de depósitos e a imputação de
subsídios para o investimento. Regista-se
em 2015 um resultado positivo de
57.995,94 €.
32
7. Prémios e Distinções
Em 2015 investigadores do CIIMAR
foram distinguidos com alguns prémios:
A aluna de doutoramento Carolina
Castro foi distinguida com o prémio Best
Poster Award "EAS Student Group Ibrahim
Okumus Award” na conferência
Aquaculture Europe 2015 em Roterdão.
Investigadores do grupo Blue
Biotechnology and Ecotoxicology do CIIMAR
foram distinguidos com o prémio de melhor
poster no 7th Symposia of Metabolism -
Therapeutic approaches for the metabolic
syndrome”, que decorreu em outubro de
2015 na Faculdade de Medicina da
Universidade do Porto
Marisa Freitas, investigadora do
CIIMAR, recebeu o prémio de melhor
comunicação oral no 4º Congresso Ibérico
de Cianotoxinas
Rita Azeredo, aluna de
doutoramento no CIIMAR, venceu o 1º
prémio regional (Europa/África/Rússia) dos
AllTech Young Scientist Awards e ficou entre
os 8 investigadores finalistas de todo o
mundo que disputaram o prémio final nos
EUA em abril de 2015
Adriana Rego e Teresa Martins,
estagiárias do programa Blue Young Talent
CIIMAR, receberam o prémio para melhor
poster na categoria de Ciências do Meio
Aquático, no III AEICBAS Biomedical
Congress em abril de 2015.
33
8. Anexos
Anexo 1. Lista de projetos de I&DT obtidos via programas de financiamento
competitivo em curso em 2015.
Anexo 2. Lista de indicadores de produtividade científica realizados em 2015.
ANEXO 1
LISTA DE PROJETOS DE I&DT OBTIDOS VIA PROGRAMAS DE FINANCIAMENTO COMPETITIVO
EM EXECUÇÃO EM 2015
(ordenados por agência / programa de financiamento e por ordem alfabética do
Investigador responsável no CIIMAR)
PROJECTS FUNDED BY EU
HORIZON 2020
Proposal ID 652644
SEA CHANGE
Responsible Investigator Isabel Sousa Pinto
Lead Partner IPMA
Duration February 2015 – June 2019
Proposal ID 634588-2
NOMORFILM – Novel marine biomolecules against biofilm. Applications to medical
devices
Responsible Investigator Vitor Vasconcelos
Lead Partner Fundacio Centre de Recerca en Salut
International de Barcelona
Duration April 2015 – March 2019
Proposal ID 633211-2
AtlantOS - Optimizing and Enhancing the Integrated Atlantic Ocean Observing
System
Responsible Investigator Isabel Sousa Pinto
Lead Partner Helmholtz Zentrum fur Ozeanforschung
Kiel
Duration April 2015 – June 2019
PROJECTS FUNDED BY EU
7TH FRAMEWORK PROGRAMME – CAPACITIES
SEABIOPLAS – Seaweeds from sustainable aquaculture as feedstock for
biodegradable bioplastics
Responsible Investigator Rodrigo Ozório
Lead Partner Daithi O’Murchu Marine Research
Station, Ireland
Duration October 2013 – September 2015
PROJECTS FUNDED BY EU/ERDF
ATLANTIC AREA TRANSNATIONAL COOPERATION PROGRAMME
MARNET – Marine Atlantic Regions Network
Responsible Investigator João Coimbra
Lead Partner BMW Assembly, Ireland
Duration July 2012 – April 2015
ARCOPOL platform - Plarform for improving maritime coastal pollution
preparedness and response in Atlantic regions
Responsible Investigator Miguel Santos
Lead Partner CETMAR, Spain
Duration January 2014 – June 2015
PROJECTS FUNDED BY EU/ERDF
CROSS-BORDER TERRITORIAL COOPERATION PROGRAMME SPAIN – PORTUGAL
NOVOMAR – Consolidação do Centro Multipolar de valorização de recursos
marinhos visando novos usos do mar
Responsible Investigator Vitor Vasconcelos
Lead Partner University of Minho
Duration January 2014 – October 2015
PROJECTS FUNDED BY ON.2
NORTH PORTUGAL REGIONAL OPERATIONAL PROGRAMME
AQUAIMPROV - Sustainable Aquaculture and Animal Welfare
(NORTE-07-0124-FEDER-000038)
Investigador Responsável Aires Oliva-Teles
Instituição Proponente CIIMAR
Duração Janeiro 2013 – Junho 2015
ECORISK – Ecological risk assessment of oils and hazardous and noxious substances
in the NW Portuguese coast (NORTE-07-0124-FEDER-000054)
Responsible Investigator Lúcia Guilhermino
Lead Partner CIIMAR
Duration January 2013 – June 2015
MARBIOTECH – Survey of natural substances from marine organisms with potential
pharmacological and ecological applications
(NORTE-07-0124-FEDER-000047)
Responsible Investigator Vitor Vasconcelos
Lead Partner CIIMAR
Duration January 2013 – June 2015
MARECON.PT – Translating marine science into products and services for the
Portuguese economy
(NORTE-07-0124-FEDER-000058)
Responsible Investigator Susana Moreira / Vitor Vasconcelos
Lead Partner CIIMAR
Duration January 2013 – June 2015
PROJECTS FUNDED BY FCT
PORTUGUESE FOUNDATION FOR SCIENCE AND TECHNOLOGY
PTDC/MAR-BIO/4107/2012
Effect on lipid metabolism of vegetable lipid interaction with carbohydrate in an
important marine aquaculture fish species, European sea bass (Dicentrarchus labrax))
Responsible Investigator Aires Oliva-Teles
Lead Partner CIIMAR
Duration May 2013 – August 2015
PTDC/AAC-AMB121301/2010
Biological werfare: unraveling the genomics of natural venoms and the mechanisms of
natural venom-resistance
Responsible Investigator Agostinho Antunes
Lead Partner CIIMAR
Duration May 2012 – September 2015
PTDC/BIA-BIC/120483/2010
LarvalSources – Assessing the ecological performance of marine protected area (MPA)
networks
Responsible Investigator Alberto Correia
Lead Partner University of Aveiro
Duration May 2012 – November 2015
PTDC/CVT/116499/2010
Lactation and milk production in goat (Capra hircus): identifying molecular markers
underlying adaptation to seasonal weight loss
Responsible Investigator Alexandre Campos
Lead Partner IBET
Duration March 2012 – August 2015
PTDC/MAR-EST/2160/2012
Urban Structures: a driver of biodiversity change in coastal ecosystems?
Responsible Investigator Ana Isabel Neto
Lead Partner CIIMAR
Duration May 2013 – April 2015
PTDC/MAR/112723/2009
AMOX – Relative importance of archaeal and bacterial ammonia oxidizers in
estuarine ecosystem function: role of environmental controls
Responsible Investigator Catarina Magalhães
Lead Partner CIIMAR
Duration October 2011 – March 2015
PTDC/AAC-AMB/113973/2008
NITROTOX - Interference of metals and PAHs in nitrate removal biological processes:
Denitrification vs Anammox
Responsible Investigator Catarina Magalhães
Lead Partner CIIMAR
Duration October 2011 – July 2015
PTDC/AAC-AMB/117688/2010
CONBI – Biodiversity and conservation of bivalves - ecogeographic, genetic and
physiological information
Responsible Investigator Elsa Froufe
Lead Partner CIIMAR
Duration March 2012 – February 2015
PTDC/AAG-GLO/3737/2012
Cheking coastal upwelling related diatoms' biomarkers: potencial proxy for primary
productivity reconstructions
Responsible Investigator Fátima Abrantes
Lead Partner CIIMAR
Duration June 2013 – September 2015
VIH/SAU/0011/2011
Structure of the HIV genome: novel frameworks for clinical diagnosis and anti-
retroviral therapeutics
Responsible Investigator Filipe Pereira
Lead Partner CIIMAR
Duration March 2014 – February 2016
PTDC/EPH-ARQ/5204/2012
Dialogue among sciences - Multidisciplinary analysis of navegability and anchoring
during the Roman period (Esposende)
Responsible Investigator Helena Granja
Lead Partner University of Minho
Duration May 2013 – October 2015
EXPL/CVT-NUT/0286/2013
Seaweeds in Ruminant Feeding
Responsible Investigator Isabel Sousa-Pinto
Lead Partner ICETA
Duration March 2014 – June 2015
PTDC/MAR-EST/4614/2012
The role of glutathione S-transferase isoenzymes in bivalve’s tolerance to microcystins
Responsible Investigator José Carlos Martins
Lead Partner CIIMAR
Duration May 2013 – September 2015
PTDC/MAR/116838/2010
Infection dynamic of aquaculture seabass and seabream by Myxozoa
Responsible Investigator Maria João Santos
Lead Partner CIIMAR
Duration April 2012 – September 2015
PTDC/AAG-MAA/2405/2012
PSYCHOBASS – Aquatic species under psycho pharmaceuticals neuroendocrine effects
Responsible Investigator Marta Ferreira
Lead Partner CIIMAR
Duration March 2013 – August 2015
PTDC/NEU-NMC/0237/2012
KDAC inhibition and intracellular dynamics: impact on NEUROnal development,
survival and transmission
Responsible Investigator Miguel Santos
Lead Partner ICETA
Duration February 2013 – July 2015
PTDC/BIA-BIC/4177/2012
Capacidade da abelha-doméstica de lutar contra doenças: comparação entre os níveis
de diversidade genética e carga microbiana entre amostras contemporâneas e históricas |
Honey bee's capacity to fight diseases: a comparison of genetic diversity and microbial load of
modern and historical samples
Responsible Investigator Paula Campos
Lead Partner CIIMAR
Duration June 2013 – September 2015
EXPL/MAR-BIO/0351/2013
PROFISH - Screening for novel probiotics within the European sea bass (Dicentrarchus
labrax) microbiota capable of improving plant feedstuffs utilization
Responsible Investigator Paula Enes
Lead Partner CIIMAR
Duration January 2014 – April 2015
PTDC/MAR-BIO/2818/2012
Bioactive compound discovery from marine cyanobacteria
Responsible Investigator Pedro Leão
Lead Partner CIIMAR
Duration May 2012 – September 2015
PTDC/AAC-AMB/116685/2010
ECO-IAS – Ecosystem-level impacts of an invasive alien species
Responsible Investigator Ronaldo Sousa
Lead Partner CIIMAR
Duration May 2012 – August 2015
PTDC/AAC-AMB/117068/2010
FreshBioFun – Biodiversity and the functioning of detritus food-webs in freswaters
Responsible Investigator Ronaldo Sousa
Lead Partner University of Minho
Duration April 2012 – September 2015
PROJECTS FUNDED BY PROMAR
FISHERIES OPERATIONAL PROGRAMME
MODELFISH - Modelo predictivo de ingestão alimentar
Responsible Investigator Rodrigo Ozório
Lead Partner CIIMAR
Duration January 2014 – December 2015
CIENCIAMOSTRA - Certificação científica para a realização de campanhas de amostra
Responsible Investigator Sandra Ramos
Lead Partner CIIMAR
Duration January 2014 – December 2015
PROJECTS FUNDED BY MFEEE
PROGRAMME EEA GRANTS
BIOMAR.PT - Aprender a conhecer o ambiente marinho de Portugal
Responsible Investigator Isabel Sousa Pinto
Lead Partner IPMA
Duration December 2014 – December 2015
Biodiversidade do nosso Mar
Responsible Investigator Isabel Sousa Pinto
Lead Partner CIIMAR
Duration December 2014 – December 2015
Poluição do Oceano: Ameaça global, acção local
Responsible Investigator José Teixeira
Lead Partner CIIMAR
Duration December 2014 – December 2015
PT02_Aviso2_0001
Biodiversity in seamounts: the Madeira-Tore and Great Meteor
Responsible Investigator Isabel Sousa Pinto
Lead Partner IPMA
Duration June 2015 – April 2017
PT02_2ºRPS_0019
Cadeias Tróficas Marinhas-Conhecer para Comunicar
Responsible Investigator Joana Saiote
Lead Partner CIIMAR
Duration August 2015 – June 2016
PT02_2ºRPS_0044
Mar de Plástico
Responsible Investigator José Teixeira
Lead Partner CIIMAR
Duration August 2015 – April 2017
PT02_Aviso4_0033
Oceanlab-Protegendo os Oceanos: vem ao laboratório fazer connosco!
Responsible Investigator Laura Guimarães
Lead Partner CIIMAR
Duration July 2015 – April 2017
Anexo 2
Lista de indicadores de produtividade científica realizados em 2014
A. PUBLICATIONS
BOOKS AND BOOK CHAPTERS
1. Agüero-Chapin, G., Pérez-Machado, G., Sánchez-Rodríguez, A., Santos, M.M., Antunes,
A. (2015). Alignment-free methods for the detection and specificity prediction of
Adenylation domains. In: Bradley S. Evans (Ed). Methods in Molecular Biology -
Nonribosomal Peptide and Polyketide Biosynthesis. Springer eds, by Humana Press,
Volume 1401, pp. 253-272. (http://dx.doi.org/10.1007/978-1-4939-3375-4)
2. Almeida, C.M.R., Couto, N., Ribeiro, H., Mucha, A.P., Bordalo, A., Basto, M.C.,
Vasconcelos, M.T.S.D. (2015). Salt Marsh Plants’ Potential for the Remediation of
Hydrocarbons-Contaminated Environments. In: Ansari, A.A., Gill, S.S., Gill, R., Lanza,
G.R., Newman, L. (Eds). Phytoremediation: Management of Environmental
Contaminants, Springer International Publishing, vol 1, pp. 323-331.
(http://dx.doi.org/10.1007/978-3-319-10395-2_23)
3. Aschwin, H.E., Alexandra, S., Put, A., Kevin, B.-S., Frédéric, M., Morten, F.P., Francisco,
A., Consolación, F., Henning, S., Robin, S., Henrik, P., Gunilla, T., Frédérique, V. and Rui,
S. (2015). Circumglobal Invasion by the Brown Seaweed Sargassum muticum. In:
Hughes, R.N., Hughes, D.J., Smith, I.P., Dale, A.C. (Eds.). Oceanography and Marine
Biology, CRC Press, pp. 81-126. (http://dx.doi.org/10.1201/b18733-4)
4. Bastos, F.L. (2015). O contributo do Tribunal Internacional do Direito do Mar para a
clarificação dos poderes dos Estados costeiros na zona económica exclusiva. In: Ribeiro,
M.C. (Coord.). 20 anos da entrada em vigor da Convenção das Nações Unidas sobre o
Direito do Mar: Portugal e os recentes desenvolvimentos no Direito do Mar, Porto,
CIIMAR - FDUP, pp. 37-53. ISBN: 978-989-97443-6-3.
5. Correia, A.T. (2015). Estudio del sitio de puesta, dispersión de las larvas y el
reclutamiento de congrio europeo (Conger conger) utilizando el analisis estructural e
quimica de los otolitos: un estudio de caso. In: Volpedo, A.V., Martins Vaz-dos-Santos,
A. (Eds). Métodos de estudios com otolitos: principios e aplicaciones. 1ª Edición Bilingue,
Buenos Aires, Argentina, pp. 209-224. ISBN 978-987-33-8884-2.
6. Deurloo, R., Yan, W., Bos, M., Ayres-Sampaio, D., Magalhães, A., Becker, B., Becker, D.,
Bastos, L. (2015). A comparison of the performance of medium- and high-quality inertial
systems grades for strapdown airborne gravimetry. IAG Symposia “IAG 150 Years”,
Springer-Verlag, Potsdam, Germany, pp. 1-7.
(http://dx.doi.org/10.1007/1345_2015_18)
7. Graça, P.Q. (2015). Ilhas Selvagens, a disputa da última fronteira. In: Ribeiro, M.C.
(Coord.). 20 anos da entrada em vigor da Convenção das Nações Unidas sobre o Direito
do Mar: Portugal e os recentes desenvolvimentos no Direito do Mar, Porto, CIIMAR –
FDUP, pp. 21-36. ISBN: 978-989-97443-6-3.
8. Guedes, A.C., Sousa-Pinto, I. and Malcata, F.X. (2015). Chapter 8 - Application of
Microalgae Protein to Aquafeed. In: Se-Kwon, K. (Ed.), Handbook of Marine Microalgae:
Biotechnology Advances. Elsevier Inc., pp. 93-125. (http://dx.doi.org/10.1016/B978-0-
12-800776-1.00008-X)
9. Larsen, K., Gutu, M., & Sieg, J. (2015). Tanaidacea. Traité de Zoologie 8B(59), pp. 249-
329.
10. Madeira, S., Sousa, J.J., Gonçalves, J. (2015). Topografia - Exercícios e Tratamento de
Erros. Edições Lidel. ISBN 9789897521355.
11. Madureira, T.V., Ribeiro, A.R. and Tiritan, M.E. (2015). Quantificação de fármacos em
águas no ambiente. In: Cass, Q.B and Cassiano, N.M (Eds). Cromatografia Líquida:
Tendências e Novas Aplicações. Elsevier Editora Ltda, pp. 197-224. ISBN 978-85-352-
7597-1. ISBN (electronic version) 978-85-352-7598-8.
12. Martins, M.R., Costa, M. (2015). Marine Cyanobacteria Compounds with Anticancer
Properties: Implication of Apoptosis. In: Kim, Se-Kwon (Ed.). Handbook of Anticancer
Drugs from Marine Origin. Chapter 29, Springer International Publishing, pp. 621-647).
ISBN 978-3-319-07145-9. (http://dx.doi.org/10.1007/978-3-319-07145-9_29)
13. Noronha, F. (2015). Os instrumentos de ordenamento do espaço marítimo e os conflitos
de usos ou actividades na nova Lei de Bases da Política de Ordenamento e de Gestão do
Espaço Marítimo Nacional. In: Ribeiro, M.C. (Coord.). 20 anos da entrada em vigor da
Convenção das Nações Unidas sobre o Direito do Mar: Portugal e os recentes
desenvolvimentos no Direito do Mar, Porto, CIIMAR - FDUP, pp. 157-171. ISBN: 978-989-
97443-6-3.
14. Noronha, F. (2015). A vis attractiva entre o direito do ambiente e o direito do urbanismo:
breve conspecto das refracções jus ambientais no plano urbanístico. Estudos
Comemorativos dos 20 Anos da Abreu Advogados. Colecção Estudos n.º 4, IAB,
Almedina.
15. Oliva-Teles, A., Enes, P., Peres, H. (2015). Replacing fishmeal and fish oil in industrial
aquafeed. Davis, A. (Ed.). Feed and feeding practices in aquaculture. Woodhead
Publishing Limited, pp. 203-233. ISBN: 9780081005064.
16. Pavanelli, G.C., Eiras, J.C., Yamaguchi, M.U. and Takemoto, R.M. (Ed.) (2015). Zoonoses
Humanas Transmissíveis Pelos Peixes no Brasil. UNICESUMAR, Maringá, Brasil, PR, 145
p.
17. Ribeiro, M.A. (2015). O artigo 82.º da Convenção de Montego Bay: aspetos práticos e
conceptuais. In: Ribeiro, M.C. (Coord.). 20 anos da entrada em vigor da Convenção das
Nações Unidas sobre o Direito do Mar: Portugal e os recentes desenvolvimentos no
Direito do Mar, Porto, CIIMAR - FDUP, pp. 109-114. ISBN: 978-989-97443-6-3.
18. Ribeiro, M.A. (2015). Responsibility of Private Entities in International Environmental
Law. In: Gal-Or, N., Ryngaert, C., Northmann, M. (Eds.). Responsibilities of the Non-State
Actor in Armed Conflict and the Market Place. Theoretical considerations and Empirical
Findings. Brill Nijhoff, Leiden/Boston, pp. 217-234.
19. Ribeiro, M.C. (2015). Entre o apelo dos recursos minerais e a protecção dos ecossistemas
vulneráveis do mar profundo em Portugal. Enquadramento legal, sistema de
competências e ordenamento. In: Ribeiro, M.C. (Coord.). 20 anos da entrada em vigor
da Convenção das Nações Unidas sobre o Direito do Mar: Portugal e os recentes
desenvolvimentos no Direito do Mar, Porto, CIIMAR - FDUP, pp. 55-108. ISBN: 978-989-
97443-6-3.
20. Souza-Filho, J.F., Negromonte, A.O., Araújo-Silva, C.L., Albuquerque, D.L., Silva, E.G.,
Almeida, F., Santana, F.S., Araújo, M.S.L.C. and Paiva, R.J.C. (2015). Crustáceos. In:
Souza-Filho, J. (Ed), Guia Biológico do Litoral de Pernambuco, pp. 176. Brasil, GL Editora
Gráfica LTDA. ISBN 978-85-8031-035-1.
21. Valente, L.M.P., Dinis, M.T. and Gonçalves, F. (2015). Aquacultura em Portugal: presente
e perspetivas futuras. In: In: Ribeiro, M.C. (Coord.). 20 anos da entrada em vigor da
Convenção das Nações Unidas sobre o Direito do Mar: Portugal e os recentes
desenvolvimentos no Direito do Mar, Porto, CIIMAR - FDUP, pp. 233-248. ISBN: 978-989-
97443-6-3.
22. Van Der Veer, H.W., Freitas, V. and Leggett, W.C. (2015). Recruitment level and
variability. In Flatfishes: Biology and Exploitation: Second Edition. Wiley Blackwell, pp.
185-206. (http://dx.doi.org/10.1002/9781118501153.ch8)
23. Vasconcelos, V., Leão, P., Campos, A. (2015). Cyanobacterial Toxins. In: Botana, L.M. and
Alfonso, A. (Eds). Phycotoxins: Chemistry and Biochemistry, Chapter 10, Second edition,
Wiley Blackwell, pp. 225-238. ISBN: 978-1-118-50036-1.
24. Zanella, T.V. (2015). A (re)ação internacional para a proteção do meio marinho: uma
análise da evolução da proteção ambiental dos mares. In: Pereira, A.C.P. and Menezes,
W. (Eds). Direito e Relações Internacionais na América Latina, 1 ed., Arraes Editores, v.
1, pp. 678-695.
25. Zanella, T.V. (2015). Direito do Mar - Textos Selecionados, 1 ed., Curitiba: Juruá, v. 1,
230p.
PUBLICATIONS IN INTERNATIONAL PEER REVIEWED JOURNALS
1. Aarestrup, K., Baktoft, H., Thorstad, E.B., Svendsen, J.C., Höjesjö, J.
and Koed, A. (2015). Survival and progression rates of anadromous
brown trout kelts Salmo trutta during downstream migration in
freshwater and at sea. Marine Ecology Progress Series 535, 185-
195. (http://dx.doi.org/10.3354/meps11407)
2. Abdel-Baki, A.A.S., Al-Quraishy, S., Rocha, S., Dkhil, M.A., Casal, G.
and Azevedo, C. (2015). Ultrastructure and phylogeny of Glugea
nagelia sp. n. (Microsporidia: Glugeidae), infecting the intestinal
wall of the yellowfin hind, Cephalopholis hemistiktos
(Actinopterygii: Serranidae), from the Red Sea. Folia Parasitologica
62(1), 1-7. (http://dx.doi.org/10.14411/fp.2015.007)
3. Ablain, M., Cazenave, A., Larnicol, G., Balmaseda, M., Cipollini, P.,
Faugère, Y., Fernandes, M.J., Henry, O., Johannessen, J.A.,
Knudsen, P., Andersen, O., Legeais, J., Meyssignac, B., Picot, N.,
Roca, M., Rudenko, S., Scharffenberg, M.G., Stammer, D., Timms,
G. and Benveniste, J. (2015). Improved sea level record over the
satellite altimetry era (1993-2010) from the Climate Change
Initiative project. Ocean Science 11(1), 67-82.
(http://dx.doi.org/10.5194/os-11-67-2015)
4. Abuelmola, A., Bastos, L., Gonçalves, J.A. (2015). High-Accuracy
Satellite Image Analysis and Rapid DSM Extraction for Urban
Environment Evaluations (Tripoli-Libya). World Academy of
Science, Engineering and Technology. International Journal of
Computer, Electrical, Automation, Control and Information
Engineering 9(3), 661-666.
5. Afonso, C., Costa, S., Cardoso, C., Oliveira, R., Lourenço, H.M.,
Viula, A., Batista, I., Coelho, I. and Nunes, M.L. (2015). Benefits and
risks associated with consumption of raw, cooked, and canned
tuna (Thunnus spp.) based on the bioaccessibility of selenium and
methylmercury. Environmental Research 143, 130-137.
(http://dx.doi.org/10.1016/j.envres.2015.04.019)
6. Alex, A. and Antunes, A. (2015). Pyrosequencing characterization
of the microbiota from Atlantic intertidal marine sponges reveals
high microbial diversity and the lack of co-occurrence patterns.
PLoS ONE 10(5), e0127455.
(http://dx.doi.org/10.1371/journal.pone.0127455)
7. Alex, A. and Antunes, A. (2015). Whole genome sequencing of the
symbiont pseudovibrio sp. from the intertidal marine sponge
polymastia penicillus revealed a gene repertoire for host-switching
permissive lifestyle. Genome Biology and Evolution 7(11), 3022-
3032. (http://dx.doi.org/10.1093/gbe/evv199)
8. Almécija, C., Sharma, M., Cobelo-García, A., Santos-Echeandía, J.
and Caetano, M. (2015). Osmium and platinum decoupling in the
environment: Evidences in intertidal sediments (Tagus Estuary, SW
Europe). Environmental Science and Technology 49(11), 6545-
6553. (http://dx.doi.org/10.1021/acs.est.5b00591)
9. Almeida, D., Maldonado, E., Vasconcelos, V. and Antunes, A.
(2015). Adaptation of the mitochondrial genome in cephalopods:
Enhancing proton translocation channels and the subunit
interactions. PLoS ONE 10(8), e0135405.
(http://dx.doi.org/10.1371/journal.pone.0135405)
10. Almeida, J.R. and Vasconcelos, V. (2015). Natural antifouling
compounds: Effectiveness in preventing invertebrate settlement
and adhesion. Biotechnology Advances 33(3-4), 343-357.
(http://dx.doi.org/10.1016/j.biotechadv.2015.01.013)
11. Almeida, J.R., Freitas, M., Cruz, S., Leão, P.N., Vasconcelos, V. and
Cunha, I. (2015). Acetylcholinesterase in biofouling species:
Characterization and mode of action of cyanobacteria-derived
antifouling agents. Toxins 7(8), 2739-2756.
(http://dx.doi.org/10.3390/toxins7082739)
12. Álvarez-Muñoz, D., Rodríguez-Mozaz, S., Maulvault, A.L., Tediosi,
A., Fernández-Tejedor, M., Van den Heuvel, F., Kotterman, M.,
Marques, A. and Barceló, D. (2015). Occurrence of
pharmaceuticals and endocrine disrupting compounds in
macroalgaes, bivalves, and fish from coastal areas in Europe.
Environmental Research 143, 56-64.
(http://dx.doi.org/10.1016/j.envres.2015.09.018)
13. Alves, C., Pereira, R., Prieto, L., Amorim, A. and Pereira, F. (2015).
Results of the GHEP-ISFG collaborative exercise for the taxonomic
identification of forensic samples using the SPInDel method.
Forensic Science International: Genetics Supplement Series 5,
e184-e185. (http://dx.doi.org/10.1016/j.fsigss.2015.09.074)
14. Alves, E., Grund, J., Afonso, C., Netto, A., Carvalho, F. & Dinis-
Oliveira, R. Alves, E., Ferreira, A., Afonso, C., Cravo, S., Netto, A.,
Carvalho, F., and Dinis-Oliveira, R. (2015). Validation of a modified
QuEChERS extraction/GC–MS methodology for quantification of
drugs of abuse in human samples. Toxicology Letters, S376-S376.
(http://dx.doi.org/10.1016/j.toxlet.2015.08.1073)
15. Alves, E.A., Grund, J.P.C., Afonso, C.M., Netto, A.D.P., Carvalho, F.
and Dinis-Oliveira, R.J. (2015). The harmful chemistry behind
krokodil (desomorphine) synthesis and mechanisms of toxicity.
Forensic Science International 249, 207-213.
(http://dx.doi.org/10.1016/j.forsciint.2015.02.001)
16. Alves, E.A., Soares, J.X., Afonso, C.M., Grund, J.P.C., Agonia, A.S.,
Cravo, S.M., Netto, A.D.P., Carvalho, F. and Dinis-Oliveira, R.J.
(2015). The harmful chemistry behind "krokodil": Street-like
synthesis and product analysis. Forensic Science International 257,
76-82. (http://dx.doi.org/10.1016/j.forsciint.2015.07.042)
17. Alves, R., Preto, M., Vasconcelos, V., Oliveira, R.S. and Martins, R.
(2015). Cytotoxicity induced by extracts of pisolithus tinctorius
spores on human cancer and normal cell lines-evaluation of the
anticancer potential. Journal of Toxicology and Environmental
Health - Part A: Current Issues 78(13), 840-847.
(http://dx.doi.org/10.1080/15287394.2015.1051176)
18. Amaral, C.R.L., Maciel, V.A., Pereira, F., Mazzoni, R., Silva, D.A.,
Amorim, A. and Carvalho, E.F. (2015). Genetic diversity of
freshwater fishes from the South American Atlantic Rainforest:
The case study of the genus Phalloceros. Forensic Science
International: Genetics Supplement Series 5, e608-e610.
(http://dx.doi.org/10.1016/j.fsigss.2015.09.240)
19. Amaral, C.R.L., Pereira, F., Loiola, S., Silva, D.A., Amorim, A. and
Carvalho, E.F. (2015). The shark panel: An InDel multiplex for shark
species identification. Forensic Science International: Genetics
Supplement Series 5, e430-e432.
(http://dx.doi.org/10.1016/j.fsigss.2015.09.171)
20. Amaro, H.M., Fernandes, F., Valentão, P., Andrade, P.B., Sousa-
Pinto, I., Malcata, F.X. and Guedes, A.C. (2015). Effect of solvent
system on extractability of lipidic components of Scenedesmus
obliquus (M2-1) and Gloeothece sp. on antioxidant scavenging
capacity thereof. Marine Drugs 13(10), 6453-6471.
(http://dx.doi.org/10.3390/md13106453)
21. Amat, N., Umar, A., Hoxur, P., Anaydulla, M., Imam, G., Aziz, R.,
Upur, H., Kijjoa, A. and Moore, N. (2015). Traditional Uighur
Medicine Karapxa decoction, inhibits liver xanthine oxidase and
reduces serum uric acid concentrations in hyperuricemic mice and
scavenges free radicals in vitro. BMC Complementary and
Alternative Medicine 15(1), 131.
(http://dx.doi.org/10.1186/s12906-015-0644-1)
22. Amorim, E., Ramos, S., Elliott, M. and Bordalo, A.A. (2015).
Immigration and early life stages recruitment of the European
flounder (Platichthys flesus) to an estuarine nursery: The influence
of environmental factors. Journal of Sea Research 107(Part 1), 56-
66. (http://dx.doi.org/10.1016/j.seares.2015.07.005)
23. Amorim, M.C.P., Conti, C., Modesto, T., Gonçalves, A. and Fonseca,
P.J. (2015). Agonistic sounds signal male quality in the Lusitanian
toadfish. Physiology and Behavior 149, 192-198.
(http://dx.doi.org/10.1016/j.physbeh.2015.06.002)
24. Anacleto, P., Maulvault, A.L., Nunes, M.L., Carvalho, M.L., Rosa, R.
and Marques, A. (2015). Effects of depuration on metal levels and
health status of bivalve molluscs. Food Control 47, 493-501.
(http://dx.doi.org/10.1016/j.foodcont.2014.07.055)
25. Andrade, T., Afonso, A., Pérez-Jiménez, A., Oliva-Teles, A., de las
Heras, V., Mancera, J.M., Serradeiro, R. and Costas, B. (2015).
Evaluation of different stocking densities in a Senegalese sole
(Solea senegalensis) farm: Implications for growth, humoral
immune parameters and oxidative status. Aquaculture 438, 6-11.
(http://dx.doi.org/10.1016/j.aquaculture.2014.12.034)
26. Andreotti, F., Mucha, A.P., Caetano, C., Rodrigues, P., Rocha
Gomes, C. and Almeida, C.M.R. (2015). Interactions between salt
marsh plants and Cu nanoparticles - Effects on metal uptake and
phytoremediation processes. Ecotoxicology and Environmental
Safety 120, 303-309.
(http://dx.doi.org/10.1016/j.ecoenv.2015.06.017)
27. Aneiros, F., Rubal, M., Troncoso, J.S. and Bañón, R. (2015).
Subtidal benthic megafauna in a productive and highly urbanised
semi-enclosed bay (Ría de Vigo, NW Iberian Peninsula).
Continental Shelf Research 110, 16-24.
(http://dx.doi.org/10.1016/j.csr.2015.09.018)
28. Antunes, J.T., Leão, P.N. and Vasconcelos, V.M. (2015).
Cylindrospermopsis raciborskii: Review of the distribution,
phylogeography, and ecophysiology of a global invasive species.
Frontiers in Microbiology 6, 473.
(http://dx.doi.org/10.3389/fmicb.2015.00473)
29. Araújo, M., Alves, R.C., Pimentel, F.B., Costa, A.S.G., Fernandes,
T.J.R., Valente, L.M.P., Rema, P. and Oliveira, M.B.P.P. (2015). New
approach for vitamin E extraction in rainbow trout flesh:
Application in fish fed commercial and red seaweed-
supplemented diets. European Journal of Lipid Science and
Technology 117(9), 1398-1405.
(http://dx.doi.org/10.1002/ejlt.201400656)
30. Araújo, O., Pereira, P., Cesário, R., Pacheco, M. and Raimundo, J.
(2015). The sub-cellular fate of mercury in the liver of wild mullets
(Liza aurata) - Contribution to the understanding of metal-induced
cellular toxicity. Marine Pollution Bulletin 95(1), 412-418.
(http://dx.doi.org/10.1016/j.marpolbul.2015.03.036)
31. Araújo, R., Serrão, E.A., Sousa-Pinto, I., Arenas, F., Monteiro, C.A.,
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12. Iglesias, I., Couvelard, X., Avilez-Valente, P., Caldeira, R.M.A. (2015). NW Iberia shelf
dynamics and the behaviour of the Douro River plume. Geophysical Research Abstracts
Volume 17, EGU2015-12821. European Geophysical Society 2015, eISSN 1607-7962.
13. Iglesias, I., Lázaro, C., Fernandes, M. J., Bastos, L. (2015). North Atlantic teleconnection
patterns signature on sea level from satellite altimetry. Geophysical Research Abstracts
Volume 17, EGU2015-12353. European Geophysical Society 2015, eISSN 1607-7962.
14. Iglesias, I., Lorenzo, M. N., Rodríguez-Fonseca, B., Taboada, J. J., Gómez-Gesteira, M.
(2015). Teleconnections between El Niño events and the north western Iberian
Peninsula extreme rainfall. Geophysical Research Abstracts Volume 17, EGU2015-
13632. European Geophysical Society 2015, eISSN 1607-7962.
15. Iglesias, I., Lorenzo, M. N., Taboada, J. J., Ramos, A. M. (2015). Effects of climate variation
on viticulture in Spain. Geophysical Research Abstracts Volume 17, EGU2015-12353;
European Geophysical Society 2015, eISSN 1607-7962.
16. Legeais, J.F., Larnicol, G., Cazenave, A., Ablain, M., Benveniste, J., Lucas, B. M., Timms,
G., Johannessen, J., Knudsen, P., Cipollini, P., Roca, M., Rudenko, S., Fernandes, J.,
Balmaseda, M., Quartly, G., Fenoglio-Marc, L., Scharfennberg, M., Meyssignac, B.,
Guinle, T., Andersen, O. (2015). Two Decades of Global and Regional Sea Level
Observations from the ESA Climate Change Initiative Sea Level Project Geophysical
Research Abstracts Volume 17, EGU2015-5762, eISSN 1607-7962.
17. Martinho, F., Freitas, V., Santos, P.T., Bremm, C., Campos, J., Van Der Veer, H.W. (2015).
Early life stages of plaice Pleuronectes platessa in cold-water nurseries. Front. Mar. Sci.
Conference Abstract: XV European Congress of Ichthyology.
(http://dx.doi.org/10.3389/conf.fmars.2015.03.00090)
18. Moreira, J., Salazar, S., Leão, M., Pinto, M., Saraiva, L. & Cidade, H. (2015) Promising
caspase modulators with flavonoid scaffold.In Proceedings of the 1st Int. Electron. Conf.
Med. Chem., 2-27 November; Sciforum Electronic Conference Series. 1, A013.
(http://dx.doi.org/10.3390/ecmc-1-A013)
19. Neves, A., Sousa, E., Pinto, M. & Correia-da-Silva, M. (2015) Potential Orally-Active
Heparin-Like Compounds: Synthesis and Anticoagulant Activity.In Proceedings of the 1st
Int. Electron. Conf. Med. Chem., 2-27 November; Sciforum Electronic Conference Series,
1, A018. (http://dx.doi.org/10.3390/ecmc-1-A018)
20. Neves, V., Guedes, A., Campos, J., Freitas, V. (2015). Aberrant otoliths in juvenile
flounder Platichthys flesus (L.). Front. Mar. Sci. Conference Abstract: XV European
Congress of Ichthyology. (http://dx.doi.org/10.3389/conf.fmars.2015.03.00106)
21. Mendes C, Ramos S, Elliott M and Bordalo A. A. 2015. Trophic interactions of Platichthys
flesus and Solea solea juveniles in the Lima estuary nursery (NW Portugal). Front. Mar.
Sci. Conference Abstract: XV European Congress of Ichthyology.
(http://dx.doi.org/0.3389/conf.FMARS.2015.03.00252)
22. Rebelo, C., Rodrigues, A., Tenedório, J.A., Gonçalves, J.A, Marnoto, J. (2015). Building 3D
City Models: Testing and Comparing Laser Scanning and Low-Cost UAV Data Using FOSS
Technologies. Lecture Notes in Computer Science 9157, pp. 367-379, 2015.
(http://dx.doi.org/10.1007/978-3-319-21470-226)
23. Santos, R.V., Ramos, S. and Bonecker, A.C. (2015). Using fish larvae as indicators of
estuarine ecosystem condition in Rio de Janeiro State, Brazil. Front. Mar. Sci. Conference
Abstract: XV European Congress of Ichthyology.
(http://dx.oid.org/10.3389/conf.FMARS.2015.03.00129)
24. Santos, R., Fernandes, L., Varandas, S., Pereira, M., Sousa, R., Teixeira, A., Lopes-Lima,
M., Cortes, R. & Pacheco, F. (2015). The impacts of climate and land-use change
scenarios on river ecology: the case of Margaritifera margaritifera. EGU General
Assembly Conference Abstracts, Vol. 17, p. 13986.
25. Sousa, E., Lemos, A., Gomes, A., Cravo, S., & Pinto, M. (2015). Synthesis of Aminated
Xanthones: Exploiting Chemical Routes to Reach for Bioactive Compounds. In:
Proceedings of the 1st Int. Electron. Conf. Med. Chem., 2-27 November, Sciforum
Electronic Conference Series, 1, A022. (http://dx.doi.org/10.3390/ecmc-1-A022)
26. Sousa, J.F., Freitas, V., Santos, P. (2015). Determination of interannual variability in early
life history of Pleuronectes platessa (L.) using otolith microstructure. Front. Mar. Sci.
Conference Abstract: XV European Congress of Ichthyology.
(http://dx.oid.org/10.3389/conf.FMARS.2015.03.00132)
27. Teodoro, A., Duarte, L., Sillero, N., Gonçalves, J.A., Fonte, J., Gonçalves-Seco, L., Pinheiro
Da Luz, L.M. and Dos Santos Beja, N.M.R. (2015) An integrated and open source GIS
environmental management system for a protected area in the south of Portugal. In:
Michel, U., Ehlers, M., Schulz, K., Nikolakopoulos, K.G. and Civco, D. (Eds). Proc. SPIE
9644, Earth Resources and Environmental Remote Sensing/GIS Applications VI, 96440U.
(http://dx.doi.org/10.1117/12.2193578)
OTHER INTERNATIONAL PUBLICATIONS
1. Bogan, A.E., Lopes-Lima, M., Sousa, R., & Zieritz, A. (2015). Initial Survey of the
Freshwater Bivalve Fauna of Peninsular Malaysia. Ellipsaria 17 (4): 19-20.
2. Burlakova, L., Mehler, K., Karatayev, A. & Lopes-Lima, M. (2015). 2nd International
Meeting on Biology and Conservation of Freshwater Bivalves. Ellipsaria 17 (4): 1-4.
3. Fernandes, C. et al. (2015). Chiral HPLC separation of chiral derivatives of xanthones
using the (S,S)-Whelk-O® 1 chiral stationary phase, Application Note: Chiral, by Regis
Technologies, Inc., LCGC North America, 22 October.
4. Granja, H., Pinho, J.L. (2015). Belinho Beach, NW Portugal: an example of rapid
beach change. Coastal Care, Beach of the Month.
(http://coastalcare.org/2015/10/belinho-beach-nw-portugal-an-example-of-rapid-
beach-change-by-h-granja-j-l-s-pinho/)
5. Mesquita S.R., van Drooge B.L., Oliveira E., Grimalt J.O., Barata C., Vieira N.,
Guimaraes L., Piña B. (2015). Toxicogenomic analysis of rural and urban air particles.
Expression profiling by array. NCBI's Gene Express Omnibus database, Series record
GSE53522.
6. Saraiva, A. (2015). Flatfish pathology: the case of turbot Scophthalmus maximus L.
in Portugal. Foro Iberoam. Rec. Mar. Acui. VII, pp. 23-30.
7. Schulz, M., Goose, H., Hofmann, E., Traon, P-I., Lozier, S., Salihoglu, B., Sousa Pinto,
I. (2015). Ocean Climate nexus: The critical role of ocean science in responding to
climate change. European Marine Board. Oostende.
8. Valente, L.M.P. 2015. Seaweeds as sustainable feed ingredients for farmed fish
species. Effects on growth, immunological response and flesh quality. In: Cruz-
Suárez, L.E., Ricque-Marie, D., Tapia-Salazar, M., Nieto-López, M.G., Villarreal-
Cavazos, D. A., Gamboa-Delgado, J., Rivas Vega, M. y Miranda Baeza, A. (Eds),
Nutrición Acuícola: Investigación y Desarrollo, Universidad Autónoma de Nuevo
León, San Nicolás de los Garza, Nuevo León, México, pp. 169-182.
NACIONAL / PEDAGOGIC PUBLICATIONS
1. Costa, S. (2015). A Longa Viagem de Angui e Luna, 60 p. CIIMAR, Porto, ISBN: 978-989-
97443-2-5.
2. Costa, S., Guilhermino, L. (2015). Derrames de petróleo: Causas, consequências e
medidas de mitigação. Conjunto Pedagógico para o 1º Ciclo do Ensino Básico. CIIMAR,
Porto, 65 p. ISBN: 978-989-97443-3-2.
3. Ribeiro, D.C., Costa, S. and Guilhermino, L. (Eds). (2015). Monitorização e Avaliação de
Risco Ecológico de Derrames Químicos e Contaminação Ambiental por Substâncias
Químicas. CIIMAR, Porto, ISBN 978-989-97443-4-9.
B. ADVANCED TRAINING
PhD THESES
Name: Ângela Brito
Thesis title: Screening for secondary metabolites and the capacity to fix nitrogen in benthic
cyanobacteria isolated from the Portuguese coast
Doctoral Programme/Doctoral Degree:
Faculty/University: Faculty of Sciences, University of Porto
Supervisor: Paula Tamagnini (FCUP)
Co-supervisor(s): Vitor Vasconcelos
Name: Catarina Churro
Thesis title: Harmful Cyanobacteria: Accessing Planktothrix species diversity and associated
toxins using quantitative real-time PCR in natural waters
Doctoral Programme/Doctoral Degree: Biology
Faculty/University: Faculty of Sciences, University of Porto
Supervisor: Vitor Vasconcelos
Co-supervisor(s): Elisabete Valério
Name: Jakeline Marcela Azambuja de Freitas
Thesis title: Performance and haematological responses of the Nile tilapia subjected to different
levels of protein and stress conditions
Doctoral Programme/Doctoral Degree: Programa de pós-graduação em Zootecnia
Faculty/University: Faculdade de Medicina Veterinária e Zootecnia - UNESP/Botucatu, Brasil
Supervisor: Margarida Barros
Co-supervisor: Helena Peres
Name: José Pedro Machado Oliveira
Thesis title: Experimental test of the effects of compounded anthropogenic perturbations on
intertidal assemblages on Portuguese rocky shores
Doctoral Programme/Doctoral Degree: Biomedical Sciences
Faculty/University: ICBAS, University of Porto
Supervisor: Michael Weber
Co-supervisor(s): Iacopo Bertocci, Isabel Sousa-Pinto
Name: Maria Isabel Araújo Pinto
Thesis title: Pesticides in water, sediments and biota of semi-enclosed coastal lagoons: sources,
pathways and impact on aquatic organisms
Doctoral Programme/Doctoral Degree: Sustainable Chemistry
Faculty/University: Faculty of Science and Technology, dade de Ciencias e Tecnologia,
Universidade Nova de Lisboa
Supervisor: João Paulo Noronha
Co-supervisor(s): Carlos Vale, Gerhard Sontag
Name: Marisa Silva
Thesis title: Emergent toxins in North Atlantic temperate waters and new vectors
Doctoral Programme/Doctoral Degree: Biology
Faculty/University: Faculty of Sciences, University of Porto
Supervisor: Vitor Vasconcelos
Co-supervisor(s): Luis Botana
Name: Renato Adriano dos Santos
Thesis title: Efeito do ácido lipóico na capacidade de utilização de carboidratos em juvenis de
sargo
Doctoral Programme/Doctoral Degree: Programa de pós-graduação em Ciências Fisiológicas –
Fisiologia Animal Comparada
Faculty/University: Universidade Federal do Rio Grande, Brasil
Supervisor: José Maria Monserrat
Co-supervisor(s): Aires Oliva Teles, Helena Peres
MASTER THESES
Name: Agostinho Luís Pereira Lemos
Thesis title: Design and synthesis of potential inhibitors of p53:MDM2 interaction
Master Degree: Pharmaceutical Chemistry
Faculty/University: Faculty of Pharmacy, University of Porto
Supervisor: Emília Sousa
Co-supervisor(s): Andreia Palmeira, Lucília Saraiva
Name: Alexandre Jorge Pereira Rosas da Silva
Thesis title: A produção de biogás na ETAR de Gaia Litoral: Estudo preliminar por análise
dos componentes principais
Master Degree: Ciências e Tecnologia do Ambiente
Faculty/University: Faculty of Sciences, University of Porto
Supervisor: Carlos Alberto Rocha Gomes
Co-supervisor: Ermelinda Barreiro (Industry – Águas de Gaia/ETAR de Gaia Litoral)
Name: Ana Antunes
Thesis title: Study of the histological, enzimatic and nuclear effects of the cerium dioxide
in fish gills.
Master degree: Pharmaceutical Sciences
Faculty/University: Faculdade de Ciências da Saúde da Universidade Fernando Pessoa
Supervisor: Alberto Teodorico Correia
Name: Ana Carolina Costa
Thesis title: Effects of psychopharmaceutical exposure on the neurotransmitter system
in the European seabass
Master Degree: Environmental Contamination and Toxicology
Faculty/University: ICBAS-FCUP, University of Porto
Supervisor: Marta Ferreira
Co-supervisor: Ralph Urbatza
Name: Ana Carolina Faria da Costa
Thesis title: Transcriptional level of genes involved in the neurotransmitter system of
Dicentrarchrus labrax in response to chronic exposure to psychopharmaceuticals
Master Degree: Environmental Contamination and Toxicology
Faculty/University: ICBAS-FCUP, University of Porto
Supervisor: Marta Ferreira
Co-supervisor: Ralph Urbatzka
Name: Ana Catarina da Silva Monteiro
Thesis title: Efeitos combinados de contaminantes qumicos e um fator de stress
ambiental em Carcinus maenas
Master Degree: Environmental Contamination and Toxicology
Faculty/University: ICBAS-FCUP, University of Porto
Supervisor: Laura Guimarães
Co-supervisor: Ana Cristina Rocha
Name: Ana Isabel Lopes
Thesis title: Individual and biochemical responses of the amphipod Gammarus locusta
after chronic exposure to sertraline
Master Degree: Environmental Contamination and Toxicology
Faculty/University: ICBAS-FCUP, University of Porto
Supervisor: Teresa Neuparth
Co-supervisor: Miguel Santos
Name: Ana Isabel Oliveira de Abreu
Thesis title: Long-term effects of hazardous and noxious substances in Carcinus maenas
Master Degree: Environmental Contamination and Toxicology
Faculty/University: ICBAS-FCUP, University of Porto
Supervisor: Laura Guimarães
Co-supervisor: Ana Cristina Rocha
Name: Ana Mafalda Castro
Thesis title: In vitro screening assays using the murine pre-adipocyte cell line 3T3-L1 to
study anti-obesogenic activities of cyanobacterial compounds
Master Degree: Environmental Contamination and Toxicology
Faculty/University: ICBAS-FCUP, University of Porto
Supervisor: Ralph Urbatzka
Co-supervisor: Vitor Vasconcelos
Name: Ana Rita da Conceição Neves
Thesis title: Synthesis and biological evaluation of potential antithrombotic agents
Master Degree: Pharmaceutical Chemistry
Faculty/University: Faculty of Pharmacy, University of Porto
Supervisor: Marta Correia da Silva
Co-supervisor(s): Emília Sousa, Madalena Pinto
Name: Ana Rita Silva Moreira
Thesis title: Development of poliposomes as a vehicle to deliver new molecules with
antitumor activity
Master Degree: Pharmaceutical Chemistry
Faculty/University: Faculty of Pharmacy, University of Porto
Supervisor: Domingos Ferreira
Co-supervisor: Madalena Maria Magalhães Pinto
Name: Ana Sofia Teixeira Oliveira
Thesis title: Synthesis of curcumin derivatives with potential antitumor activity
Master Degree: Pharmaceutical Chemistry
Faculty/University: Faculty of Pharmacy, University of Porto
Supervisor: Emília Sousa
Co-supervisor: Helena Vasconcelos
Name: Ana Sofia Duarte Macedo
Thesis title: Screening the effects of emerging pollutants using embryo bioassays:
triclosan, methyl-triclosan and perfluoroalkyls chemicals
Master Degree: Environmental Contamination and Toxicology
Faculty/University: ICBAS-FCUP, University of Porto
Supervisor: Miguel Santos
Name: André Carido Pereira
Thesis title: Survey of histopathological effects and evaluation of performance in juvenile
zebrafish (Danio rerio) under chronic exposure to nitrate
Master Degree: Aquatic Biological Resources
Faculty/University: Faculty of Sciences, University of Porto
Supervisor: Aurélia Saraiva
Co-supervisor: António Paulo Carvalho
Name: André Carido Pereira
Thesis title: Survey of histopathological effects and evaluation of performance in juvenile
zebrafish (Danio rerio) under chronic exposure to nitrate.
Master Degree: Aquatic Biological Resources
Faculty/University: Faculty of Sciences, University of Porto
Supervisor: Aurélia Saraiva
Co-supervisor: António Paulo Carvalho
Name: Andreia Filipa Campos Alves
Thesis title: Avaliação da cadeia trófica em dois ecossistemas de grande profundidade
do Oceano Pacífico.
Master Degree: Aquatic Biological Resources
Faculty/University: Faculty of Sciences, University of Porto
Supervisor: Teresa Amaro
Co-supervisor: Sandra Ramos
Name: Andreia Isabel Costa Martins
Thesis title: Controlo da Qualidade: Auditorias a métodos de ensaio.
Master Degree: Chemistry
Faculty/University: Faculty of Sciences, University of Porto
Supervisor: Carlos Alberto Rocha Gomes
Supervisor: André Oliveira (Industry – Silliker Portugal S.A.)
Name: Andreia Patrícia Sousa Alves de Magalhães
Thesis title: Antimicrobial activity in textiles
Master Degree: Quality Control
Faculty/University: Faculty of Pharmacy, University of Porto
Supervisor: Eugénia Pinto
Co-supervisor: Helena Neto
Name: Antonio Sánchez López
Thesis title: Potential of pre-pupae meal of the Black Soldier Fly (Hermetia illucens) as
fish meal substitute: effect on growth performance and digestibility in European sea bass
(Dicentrarchus labrax).
Master Degree: Aquaculture
Faculty/University: Universitat Politecnica de Valencia
Supervisor: Aires Oliva Teles
Co-supervisor: Helena Peres
Name: Bárbara Sofia Poléri da Silva
Thesis title: Separação enantiomérica de derivados catinónicos em drogas de abuso por
HPLC quiral. Estudo da citotoxicidade dos enantiómeros da 3,4-metilenodioxipirovalerona
(MDPV)
Master Degree: Forensic Sciences
Faculty/University: Faculdade de Medicina da Universidade do Porto
Supervisor: Fernando Manuel Gomes Remião
Co-supervisor(s): Carla Sofia Garcia Fernandes, Paula Guedes de Pinho
Name: Beatriz Rodríguez Cunha Ferreira Tavares
Thesis title: Distribuição histórica e atual do gastrópode intertidal Littorina littorea ao
longo da costa Portuguesa
Master Degree: Mestrado em Ecologia, Ambiente e Território
Faculty/University: Faculdade de Ciências da Universidade do Porto
Supervisor: Marcos Rubal García
Co-supervisor: Isabel Sousa-Pinto
Name: Bruno Miguel dos Santos Silva Pinto
Thesis title: Effects of antidepressant fluoxetine in European sea bass juveniles
Master Degree: Aquatic Biological Resources
Faculty/University: Faculty of Sciences, University of Porto
Supervisor: Marta Ferreira
Co-supervisor: Sandra Ramos
Name: Bruno Miguel dos Santos Silva Pinto
Thesis title: Effects of antidepressant fluoxetine in European sea bass juveniles
Master Degree: Aquatic Biological Resources
Faculty/University: Faculty of Sciences, University of Porto
Supervisor: Marta Ferreira
Co-supervisor: Sandra Ramos
Name: Catarina Cabral Oliveira
Thesis title: Wildlife management in conservation parks – General and Veterinary
Intervention
Master Degree: Veterinary Medicine
Faculty/University: Universidade de Trás-os-Montes e Alto Douro
Supervisor: Simone Angelucci
Co-supervisor: José Manuel de Melo Henriques de Almeida
Name: Cláudia Patrícia Ferreira Paiva
Thesis title: Evaluation of the integration of aerobic and anaerobic biological treatment
processes in an industrial chemical WWTP
Master Degree: Environmental Sciences and Technology
Faculty/University: Faculty of Sciences, University of Porto
Supervisor: Maria Teresa Borges
Co-supervisor: S. Silva (Adventech, Serviços Ambientais, S.A)
Name: Cristiana Filipa Magalhães Gregório
Thesis title: Antifungal activity and/or inhibition of mechanisms of resistance of a small
library of natural and synthetic compounds
Master Degree: Pharmaceutical Chemistry
Faculty/University: Faculty of Pharmacy, University of Porto
Supervisor: Eugénia Pinto
Co-supervisor: Madalena Pinto
Name: Daniela Machado
Thesis title: Reproductive cycle of the population of European clam, Ruditapes
decussatus, from Lagoa de Óbidos, Leiria, Portugal
Master Degree: Aquaculture
Faculty/University: Escola Superior de Turismo e Tecnologia do Mar
Supervisor: Teresa Baptista
Co-supervisor: Domitília Matias
Name: Daniela Pinho
Thesis title: Spatial and temporal variation of kelp beds and associated macroalgal
assemblages along the Portuguese coast
Master Degree: Ecology, Environment and Territory
Faculty/University: Faculty of Sciences, University of Porto
Supervisor: Iacopo Bertocci
Name: Diana Filipa Brito Martins.
Thesis title: Efeitos dos fármacos enquanto xenobióticos presentes no ambiente
aquático ao nível das alterações tecidulares reportadas em peixes por vários estudos de
toxicologia ambiental.
Master Degree: Pharmaceutical Sciences
Faculty/ University: Faculdade de Ciências da Saúde da Universidade Fernando Pessoa.
Supervisor: Alberto Teodorico Correia
Name: Diana Oliveira Pinheiro
Thesis title: Treatment of winery wastewater in SBBR integrating advanced oxidation
processes and biodegradation by microbial biofilms
Master Degree: Environmental Sciences and Technology
Faculty/University: Faculty of Sciences, University of Porto
Supervisor: Maria Teresa Borges
Co-supervisor: S. Silva (Adventech, Serviços Ambientais, S.A)
Name: Diogo Brazão Taveira Malheiro
Thesis title: Effects of oxygen availability on hematological parameters, immune status,
gill histomorphology and gene expression of Senegalese sole (Solea senegalensis): the role of
acute hyperoxia
Master Degree: Marine Sciences - Marine Resources
Faculty/University: ICBAS, University of Porto
Supervisor: Benjamín Costas
Co-Supervisor: António Afonso
Name: Eliana Patricia Duarte Vieira
Thesis title: Spatio-temporal variability of the wet component of the troposphere -
Application in Satellite Altimetry
Master Degree: Geographical Engineering
Faculty/University: Faculty of Sciences, University of Porto
Supervisor: Clara Lázaro
Co-supervisor: Joana Fernandes
Name: Fábio André Fernandes Galhano
Thesis title: Estabelecimento de protocolo de infeção de Argyrosomos regius com
Photobacterium damselae subsp. piscicida com determinação da resposta imunitária
Master Degree: Biotechnology of Marine Resources
Faculty/University: Escola Superior de Turismo e Tecnologia do Mar, Instituto Politécnico
de Leiria.
Supervisor: Teresa Batista
Co-Supervisor: Maria Manuel Sampaio Cristóvão, Benjamín Costas
Name: Filipa Moreira
Thesis title: Development of multiplex PCR assays for the detection of genetically
modified plants
Master Degree: Forensic Genetics
Faculty/University: Faculty of Science, University of Porto
Supervisor: Filipe Pereira
Name: Filipa Santos
Thesis title: Antibiotics removal in constructed wetlands: response of autochthonous
microbial community
Master Degree: Environmental Contamination and Toxicology
Faculty/University: ICBAS-FCUP, University of Porto
Supervisor: Ana Paula Mucha
Co-supervisor: C. Marisa Almeida
Name: Filipe Correia Gonçalves e Silva
Thesis title: Evolutionary genomics study of genes involved in animal adaptation
Master Degree: Biochemistry
Faculty/University: Faculty of Sciences, University of Porto
Supervisor: Agostinho Antunes
Name: Inês Montenegro
Thesis title: Autochthonous bioaugmentation – a strategy for enhanced
phytoremediation / bioremediation of mixed contamination in salt marshes
Master Degree: Environmental Contamination and Toxicology
Faculty/University: ICBAS-FCUP, University of Porto
Supervisor: C. Marisa R. Almeida
Co-supervisor: Ana Paula Mucha
Name: Inês Teixeira
Thesis title: Study of the histological, enzimatic and nuclear effects of the cerium dioxide
in fish liver and kidney.
Master degree: Specialized Laboratory analysis - Environmental Analysis and Food
Faculty/University: Faculdade de Ciências da Saúde da Universidade Fernando Pessoa
Supervisor: Alberto Teodorico Correia
Name: Ivo Ezequiel Silva Souza
Thesis title: Métodos de eliminação de fármacos e seus metabolitos ao nível das Estações
de Tratamento de Águas Residuais.
Master degree: Pharmaceutical Sciences
Faculty/University: Faculdade de Ciências da Saúde da Universidade Fernando Pessoa.
Supervisor: Alberto Teodorico Correia
Name: Jealinda Fortes
Thesis title: Caraterização e modelação da celularidade muscular do linguado (Solea
senegalensis) através da dieta
Master Degree: Mestrado de Engenharia Agronómica
Faculty/University: Faculdade de Ciências da Universidade do Porto
Supervisor: Rita Cabrita
Name: Joana Cláudia Morais da Silva Mendes
Thesis title: Estágio na Aquacultura Safiestela: Estudos da nutrição e alimentação em
larvas de linguado (Solea senegalensis)
Master Degree: Aquatic Biological Resources
Faculty/University: Faculty of Sciences, University of Porto
Supervisor: Helena Peres
Name: Joana Filipa Mendes Rações
Thesis title: Análise de fatores ambientais e dietas utilizadas na reabilitação de animais
marinhos – Golfinho Comum (Delphinus delphis) e Tartaruga-boba (Caretta caretta).
Master Degree: Animal Science
Faculty/University: University of Trás-os-Montes e Alto Douro
Supervisor: Ana Luís Guimarães Dias Lourenço
Co-supervisor: José Júlio Gonçalves Barros Martins
Name: Joana Filipa Moreira de Sousa
Thesis title: Interannual variability in early life history of Pleuronectes platessa (L.) using
otolith microstructure
Master Degree: Ecology Faculty/University: Ecology, Environment and Territory
Faculty/University: Faculty of Sciences, University of Porto
Supervisor: Paulo T. Santos
Co-supervisor: Vânia Freitas
Name: Joana Fonseca
Thesis title: Screening for small molecules with anti-mitotic activity
Master Degree: Molecular Therapies
Faculty/University: Instituto Universitário de Ciências da Saúde, CESPU
Supervisor: Hassan Bousbaa
Co-supervisor: Patrícia Silva
Name: Joana Miguel Coutinho Gomes da Silva
Thesis title: Anaerobic Biodegradation of Biodiesel in Nitrate Reducing Conditions and
Impacts on the biodegradation of Benzene and Toluene
Master Degree: Sciences and Environmental Technologies
Faculty/University: Faculty of Sciences, University of Porto
Supervisor: Anthony Danko
Co-supervisor: Catarina Magalhães
Name: Joana Patrícia Martins Moreira
Thesis title: Caspases modulators with flavonic scaffold: synthesis and biological activity
Master Degree: Pharmaceutical Chemistry
Faculty/University: Faculty of Pharmacy, University of Porto
Supervisor: Honorina Maria de Matos Cidade
Co-supervisor: Lucília Helena Ataíde Saraiva
Name: Joana Teixeira
Thesis title: Therapeutic targeting of the mitotic checkpoint to increase sensitivity of
cancer cells to anti-mitotic agents
Master Degree: Oncobiology
Faculty/University: University of Algarve
Supervisor: Hassan Bousbaa
Co-supervisor: Patrícia Silva e Álvaro Tavares
Name: João Monteiro
Thesis title: In vitro detection of non-canonical mitochondrial DNA conformations
Master Degree: Forensic Genetics
Faculty/University: Faculty of Science, University of Porto
Supervisor: Filipe Pereira
Name: José Manuel Martins Sousa Anjos Lopes
Thesis title: Fotogrametria e Deteção Remota Aplicada à Prospeção Mineira
Master Degree: Surveying Engineering
Faculty/University: Faculty of Sciences, University of Porto
Supervisor: José Alberto Álvares Pereira Gonçalves
Name: Karízia Góis e Silva
Thesis title: Estágio na empresa Conservas Portugal Norte, Lda.: Qualidade do produto
final
Master Degree: Aquatic Biological Resources
Faculty/University: Faculty of Sciences, University of Porto
Supervisor: Paulo Vaz-Pires
Co-supervisor: Sandra Moura
Name: Lourenço Ramos Pinto
Thesis title: Caracterização de crescimento muscular em dourada após suplementação
com creatina
Master Degree: Marine Sciences – Marine Resources
Faculty/University: ICBAS, University of Porto
Supervisor: Prof. Dra. Luísa Maria Pinheiro Valente
Name: Luísa Maria Moreira Viana
Thesis title: Estágio na Fábrica de Conservas Belamar: Sucedâneo de ovas de sardinha
em conserva
Master Degree: Aquatic Biological Resources
Faculty/University: Faculty of Sciences, University of Porto
Supervisor: Paulo Vaz-Pires
Co-supervisor: Carla Pinheiro
Name: Marcelo Gonçalves
Thesis title: Automatização de Importação e Manipulação de Informação Cartográfica
para SIG Caso de Estudo: Aplicação ao Modelo de Ordenamento da Orla Costeira no Troço
Caminha - Espinho
Master Degree: Surveying Engineering
Faculty/University: Faculty of Sciences, University of Porto
Supervisor: José Alberto Álvares Pereira Gonçalves
Name: Maria Inês Alves de Sousa Cruz
Thesis title: Xanthone derivatives as dual agents (anticholinesterase and antioxidants)
for Alzheimer disease: synthesis and biological evaluation.
Master Degree: Pharmaceutical Chemistry
Faculty/University: Faculty of Pharmacy, University of Porto
Supervisor: Madalena Maria Magalhães Pinto
Co-supervisor: Honorina Maria de Matos Cidade
Name: Marta Filipe dos Anjos Pinto
Thesis title: Estágio na Aquacultura Safiestela: Estudo da alimentação e comportamento
alimentar em reprodutores de linguado (Solea senegalensis)
Master Degree: Aquatic Biological Resources
Faculty/University: Faculty of Sciences, University of Porto
Supervisor: Helena Peres
Name: Marta Isabel Póvoas Monteiro
Thesis title: Molecular mechanisms of BMAA stress-response and detoxification in
Mytilus galloprovincialis
Master Degree: Aquatic Biological Resources
Faculty/University: Faculty of Sciences, University of Porto
Supervisor: Mafalda Baptista
Co-supervisor: Vitor Vasconcelos
Name: Marta Nobre de Castro Pereira
Thesis title: In-situ vs ex-situ conservation - General and veterinary intervention
Master Degree: Veterinary Medicine
Faculty/University: University of Trás-os-Montes e Alto Douro
Supervisor: José Manuel de Melo Henriques de Almeida
Name: Melissa Couto
Thesis title: Molecular and biochemical mechanisms involved in the toxicity of marine
cyanobacteria compound on cancer cell lines
Master Degree: Biochemistry in Health
Faculty/University: ESTSP, Escola Superior de Tecnologia da Saude (Instituto Politécnico
do Porto)
Supervisor: Rosario Martins
Co-supervisor: Ralph Urbatzka
Name: Miguel Rocha
Thesis title: Molecular targets involved in the goose barnacle Pollicipes pollicipes
(Cirripedia) larvae metamorphosis and settlement
Master Degree: Cellular and Molecular Biology
Faculty/University: Faculty of Sciences, University of Porto
Supervisor: Isabel Cunha
Co-supervisor(s): Filipe Pereira
Name: Nour Salam
Thesis title: Effect of salinity on the depuration rate of metal pollutants by the brown
shrimp Crangon crangon
Master Degree: Marine Biodiversity and Conservation
Faculty/University: University of Salford
Supervisor: Chiara Benvenuto, Debapriya Mondal
Co-supervisor: Joana Campos
Name: Paulo Castro
Thesis title: Palatability of the Asian clam Corbicula fluminea in an invaded system
Master Degree: Ecology
Faculty/University: University of Minho
Supervisor: Martina Ilarri
Co-supervisor: Ronaldo Sousa
Name: Pedro Manuel Araújo Martins Maia
Thesis title: Estudo Comparativo de Novas Metodologias para Geração de
Ortofotomapas em Ambiente de Produção
Master Degree: Surveying Engineering
Faculty/University: Faculty of Sciences, University of Porto
Supervisor: José Alberto Álvares Pereira Gonçalves
Name: Rafael dos Santos Alemida
Thesis title: Effect of dietary incorporation of sorghum distillers dried grains with solubles
(DDGS) in the hematological and immunological responses of Nile tilapia (Oreochromis
niloticus), submitted to Aeromonas hydrophila challenge
Master Degree: Biological Resources
Faculty/University: Faculty of Sciences, University of Porto; Faculdade de Medicina
Veterinária e Zootecnia - UNESP/Botucatu, Brasil
Supervisor: Helena Peres
Co-supervisor: Margarida Barros
Name: Ricardo Jorge Pacheco Reis
Master Report title: Aplicação de técnicas cromatográficas à informação nutricional
Master Degree: Chemistry
Faculty/University: Faculty of Sciences, University of Porto
Supervisor: M. Clara Basto
Supervisor: Alice Santos
Name: Rita Alexandra Fernandes Salgado
Thesis title: Characterization of proteins recovered from fish byproducts
Master Degree: Food Engineering
Faculty/University: Instituto Superior de Agronomia, University of Lisbon
Supervisor: Carla Pires
Co-supervisor: Miguel Mourato
Name: Rockon Ashitey Armaah
Thesis title: Water or Food? Accumulation of Arsenic through water and food by the
brown shrimp, Crangon crangon from the Upper Mersey Estuary
Master Degree: Marine Biodiversity and Conservation
Faculty/University: University of Salford
Supervisor: Chiara Benvenuto, Debapriya Mondal
Co-supervisor: Joana Campos
Name: Sandra Marques
Thesis title: Screening for small molecules with anti-mitotic activity
Master Degree: Molecular Therapies
Faculty/University: Instituto Universitário de Ciências da Saúde, CESPU
Supervisor: Hassan Bousbaa
Co-supervisor: Patrícia Silva
Name: Sara Isabel Carneiro Simões
Thesis title: Effects of stream salinization on fungal-mediated leaf decomposition: a
microcosm approach
Master Degree: Ecology
Faculty/University: University of Coimbra
Supervisor: Cristina Canhoto
Co-supervisor(s): Lúcia Guilhermino; Felix Bärlocher
Name: Sara Patrícia Pinto Moutinho
Thesis title: Potential use of meat and bone meal in diets for gilthead seabream (Sparus
aurata) juveniles
Master Degree: Aquatic Biological Resources
Faculty/University: Faculty of Sciences, University of Porto; Universitat Politènica de
València
Supervisor: Helena Peres
Co-supervisor(s): Silvia Martínez-Llorens, Miguel Jover Cerdá
Name: Sara Pires de Sousa Basto
Thesis title: Effects of low fumonisin levels in the diet of rainbow trout (Oncorhynchus
Onchorynchus)
Master Degree: Veterinary Medicine
Faculty/University: University of Trás-os-Montes e Alto Douro
Supervisor: Paulo José de Azevedo Pinto Rema
Co-supervisor: José Manuel de Melo Henriques de Almeida
Name: Sofia Coelho Botelho
Thesis title: Otimização de técnicas e processos de produção de alimento vivo: rotiferos.
Master Degree: Animal Science
Faculty/University: University of Trás-os-Montes e Alto Douro
Supervisor: José Júlio Gonçalves Barros Martins
Name: Sofia Francisco
Thesis title: Effect of climate change in bioaccumulation of emergent chemical
contaminants in fish.
Master Degree: Sciences in Marine Ecology
Faculty/University: Faculty of Sciences, University of Lisbon
Supervisor: Rui Rosa
Co-supervisor: António Marques
Name: Stephanie Castro Coelho
Thesis title: Estudo etológico do casuar (Casuarius casuarius) durante a época
reprodutiva no Parque Ornitológico de Lourosa.
Master Degree: Animal Science
Faculty/University: University of Trás-os-Montes e Alto Douro
Supervisor: José Júlio Gonçalves Barros Martins
Name: Telmo André Pereira Vieira
Thesis title: Aplicação dos GNSS à avaliação da estabilidade de Radiómetros de micro-
ondas e de modelos atmosféricos globais
Master Degree: Surveying Engineering
Faculty/University: Faculty of Sciences, University of Porto
Supervisor: Joana Fernandes
Co-supervisor: Clara Lázaro
Name: Vanessa Alexandra Martins
Thesis title: Biorremediação de petróleo na zona costeira: papel dos microorganismos
autóctones
Master Degree: Environmental Contamination and Toxicology
Faculty/University: ICBAS-FCUP, University of Porto
Supervisor: Ana Paula Mucha
Co-supervisor: C. Marisa R. Almeida
Name: Vânia Diogo
Thesis title: Therapeutic targeting of the mitotic checkpoint to increase sensitivity of
cancer cells to anti-mitotic agents
Master Degree: Oncobiology
Faculty/University: University of Algarve
Supervisor: Hassan Bousbaa
Co-supervisor: Patrícia Silva e Álvaro Tavares
Name: Vera Dantas
Thesis title: Sobreposição de recursos utilizados pelo lagostim invasor Procambarus
clarkii (Girard, 1852) e por espécies de peixes simpátricas
Master Degree: Ecology
Faculty/University: University of Minho
Supervisor: Ronaldo Sousa
Name: Verónica Sofia Salazar e Costa
Thesis title: Discovery of new modulators of caspase family proteins using the yeast
approach
Master Degree: Pharmaceutical Chemistry
Faculty/University: Faculty of Pharmacy, University of Porto
Supervisor: Lucilia Helena Ataíde Saraiva
Co-supervisor(s): Honorina Maria de Matos Cidade and Mariana Valencia C. Ferreira
Leão
Name: Vitor Rocha Miranda da Silva
Thesis title: Genome analysis of a marine sponge symbiont - a Pseudovibrio related
bacteria
Master Degree: Biochemistry
Faculty/University: Faculty of Sciences, University of Porto
Supervisor: Agostinho Antunes
C. MODELS
Ecological model to assess population recovery of marine amphipod Gammarus locusta
[de los Santos, C. B., Neuparth, T., Torres, T., Martins, I., Sheahan, D., McGowan, T., Santos, M.M.
(2015). Ecological modelling and toxicity data coupled to assess population recovery of marine
amphipod Gammarus locusta: application to disturbance by chronic exposure to aniline. Aquatic
Toxicology, 163, 60-70.]
MODELFISH – Modelo Predictivo de Ingestão Alimentar como Ferramenta de Controlo
Ambiental em Produção Aquática. Entidade Financiadora: PROMAR - Eixo III, reference (31-03-
01-FEP-0152).
Morpho-hydrodynamic model for the Douro estuary based on the Open Telemac
Modelling system.
Online HNS platform with essential tools for preparedness and response to accidental
spills. This includes two databases, numerous guidelines for environmental monitoring, and an
environmental sensitivity index for the Portuguese cost, that is key to the National Maritime
Authority. (Interreg project Arcopol Platform, available at www. ciimar.up.pt/hns).
Regional oceanic models, namely the Regional Oceanic Modelling System (ROMS) and
the COAWST system, which joins several models (ROMS + WRF + SWAN), were implemented on
the NW-Iberian peninsula coast.
D. COMPUTATIONAL APPLICATIONS
Dunphy, M., Stastna, M., Lamb, K., Subich, C., Steinmoeller, D., Magalhaes, J. M., da Silva,
J.C.B. 2015. DJLES: Dubreil-Jacotin-Long Equation Solver. Available online at:
https://github.com/mdunphy/DJLES
GNSS-Derived Path Delay Plus (GPD+) – software for the computation of the wet
tropospheric correction (WTC) of satellite altimeter missions, by spatio-temporal objective
analyses of all available and intercalibrated wet path delay data sources.
MODELFISH - The model developed by CIIMAR and FoodInTech® and integrated in a user
friendly software SIGA (Sistema Integrado para Gestão da Aquacultura).
E. PATENTS / PROVISIONAL PATENT APPLICATION
Antimalarial agent(s) and methods to obtain them.
Inventors: Leão, P., Rosário, M.M., Costa, M., Vasconcelos, V., Nogueira, F., Domingues,
V.
Provisional patent application nº 20151000052614 0198 2015/06/25.
Institutions: Interdisciplinary Centre of Marine and Environmental Research (CIIMAR);
University of Porto, Portuguese Institute of Hygiene and Tropical Medicine (IHMT–UNL) and
Polytechnic Institute of Porto (IPP).
Pyrazinoquinazolinone derivatives with antibacterial activity against gram-positive
bacteria.
Inventors: Kijjoa, A., Bessa, L., Martins da Costa, P., Buttachon, S., Dethoup, T. and
Vasconcelos, V. Provisional patent application nº 20151000052604 0198 2015/06/25.
Institutions: Interdisciplinary Centre of Marine and Environmental Research (CIIMAR)
and University of Porto.
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