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Codata Workshop 1
VViNCES – Weblabs on iNCES – Weblabs on ecosystem servicesecosystem services
Pedro Luiz Pizzigatti CorrêaUniversidade de São Paulo - BrazilAgricultural Automation Laboratory
Workshop CODATAAtibaia – SP Brazil
May 9
Codata Workshop 2
Summary
Introduction
ViNCES
Weblabs: photosynthesis and pollinators
System Architecture
Future works
Codata Workshop 3
Consortium of three research groups :
Collaboration of University of California, S. Diego – USA.
Virtual network center of ecosystem services
Virtual network center of ecosystem services
Codata Workshop 4
Organized in Weblabs of Environmental Services:
Virtual network center of ecosystem services
Virtual network center of ecosystem services
Codata Workshop 5
Virtual network center of ecosystem services
Virtual network center of ecosystem services
Objectives:Research● Allow remote access to field or lab experiments● Facilitate collaboration between researchers● Use an Advanced Internet for real-time video
streaming: High Definition video
Education / training / decision making● Make available materials on biology/ keeping of bees● Reach wider audience:
Geographically distributed audiencedifferent profiles
● “commodity” Internet – Small Definition videos
Codata Workshop 7
Open top chamber weblabOpen top chamber weblab
Open Top Chambers (OTC)● Research tools to evaluate the
effect of trace gases on vegetation● Experiments with normal and
enriched CO2 atmosphere Plant responses Plant potential as carbon sinks Kyoto Protocol
CO2 reservoir
Codata Workshop 8
Monitoring System
Virtual network center of ecosystem services
Virtual network center of ecosystem services
Codata Workshop 9
Real time video and sound captured on the beehive
BBB: Real Time Video StreamingBBB: Real Time Video Streaming
Codata Workshop 10
Audio monitoring and analysisAudio monitoring and analysis
Audio acquisition inside a colony● Studies on audio inside a colony (communication)● x other conditions (weather, food availability, threats).● Patterns, spectra, level
Partnership with James C. Nieh
University of California, S. Diego
Codata Workshop 11
Portal-Provider Weblabs Architecture
Three components : Experiment, Weblab and Portal.
Virtual network center of ecosystem services
Virtual network center of ecosystem services
Codata Workshop 12
System Architecture
Integration of Welabs and Portal (SOA paradigm)
Virtual network center of ecosystem services
Virtual network center of ecosystem services
Codata Workshop 13
Architecture Components
Species Specimens
subject data
video audio
behavioural data
Responsible Description
cadastral data
Temperature Humidity
environmental data
experiment data
Species Specimens
subject data
video audio
behavioural data
Responsible Description
cadastral data
Temperature Humidity
environmental data
experiment data
Data Experiment Model
Virtual network center of ecosystem services
Virtual network center of ecosystem services
Codata Workshop 14
Architecture Components
experiment dataexperiment data
experiment data
WMIB ACL
weblab data
weblab services
wmib_get : read data from deviceswmib_set : set up a weblab deviceannounce : shows weblabs capabilitiesretrieve : retrive weblabs experimentsrecord : record experiment data
weblab model
experiment dataexperiment data
experiment data
WMIB ACL
weblab data
weblab services
wmib_get : read data from deviceswmib_set : set up a weblab deviceannounce : shows weblabs capabilitiesretrieve : retrive weblabs experimentsrecord : record experiment data
weblab model
Data Weblab Model
Virtual network center of ecosystem services
Virtual network center of ecosystem services
Codata Workshop 15
Architecture Components
Weblab MIB (WMIB) extract
Virtual network center of ecosystem services
Virtual network center of ecosystem services
Codata Workshop 16
Architecture Components
Portal Model
experiment dataexperiment dataweblabs
PORTAL DATA
portal model
experiment dataexperiment dataweblabs
PORTAL DATA
portal model
Virtual network center of ecosystem services
Virtual network center of ecosystem services
Codata Workshop 17
Architecture Components
Weblab model considering security requirements
Coordinator
Authorization WEBLAB
Local ACL
Authentication
Local AuthenticationDatabase
Log Database
CoordinatorPortalLogger
Coordinator
Authorization WEBLAB
Local ACL
Authentication
Local AuthenticationDatabase
Log Database
CoordinatorPortalLogger
Virtual network center of ecosystem services
Virtual network center of ecosystem services
Codata Workshop 18
Future Works
Apply a metadata standard to manage portal/provider Weblab interactions (EML – Ecological Metadata Language);
Apply the consolidate architecture to the Weblab on photosynthesis and CO2 assimilation Laboratory.
Virtual network center of ecosystem services
Virtual network center of ecosystem services
Codata Workshop 19
Next steps● Video databases: increase number of species/behaviors● Real time video
Higher resolution videoComplete connection to TIDIA network (Gbps)Long term experimentsWeb control over recording
Final commentsFinal comments
Codata Workshop 20
Thank you!Thank you!
http://www.ib.usp.br/vinces
Acknowledgements: FAPESP for the financial supportAcknowledgements: FAPESP for the financial support
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