BioEmergences workflow for the reconstruction of cell lineages … · 2017. 6. 7. · CNRS...

Nadine Peyriéras, Thierry Savy, Mark HammonsUSR3695 CNRS BioEmergences

Gif-sur-Yvette

BioEmergences workflow for the reconstruction of cell lineages

from 3D+time microscopy images

Data Gurchenkov, Duloquin (BioEmergences lab)

e-infrastructure concept: webservice for shared database and tools

http://bioemergences.eu

BioEmergences  Webservice    email  to:  nadine.peyrieras@cnrs.fr  

for  registra:on5  

Thierry Savy - Mov-IT software

Multilevel dynamics modeled from 3D+time imaging data

BioEmergences  workflow    Faure  et  al.  Nature  Comm.  2016  

Gene  expression  atlas    Castro  et  al.  Plos  Comp  Biol  2014    Kinema:c  analysis  Pastor  et  al.  BioArxiv  

MECAGEN  Delile  et  al.  Nature  Comm.  2017  

Complex  Systems  Digital  Campus:    CS-­‐DC  UNESCO  UniTwin  hTp://cs-­‐dc.org/  

120  Universi:es  -­‐  26  Countries  -­‐  4  Con:nents  

A  shared  Ecosystem  for  research  and  educa:on  

Collaborators MMU Manchester René Doursat CNRS Montpellier Georges Lutfalla PHLAM Lille Pierre Suret University of Bratislava Karol Mikula UPM Madrid Maria Ledesma LOB Polyechnique Emmanuel Beaurepaire LPM Polyechnique Denis Grebenkov IPGG Jacques Fattaccioli

LAL IDG Michel Jouvin ccIN2P3 Jean Yves Nief Banyuls Marine Station Villefranche/mer Marine Station Industrial partner PhaseView - Cyprian Wozniak

Current members Paul BourgineAdil BakayanClovis BéraudMathieu BouyrieSylvia BruneauJulien DumontDimitri Fabrèges Monique Frain Mark HammonsMatthieu HerrmannFanny HussonYannick KergosienAntonio OrtizDavid PastorAdeline RauschThierry SavyJuan Simoes

Former membersIngrid ColinAudrey ColinLouise DuloquinDimitri FabrègesBenoit LombardotGaëlle RecherBarbara RizziPaul Villoutreix

INRA Jouy en Josas V. Duranthon, N. Daniel INRA Jouy en Josas C. Langevin, P. Boudinot Institut Pasteur JF Nicolas, E. Hirsinger Agroparistech Antoine Cornejuols

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