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Interdisciplinary research and open access - a talk by Matt Cockerill at Berlin 10 Open Access meeting (Stellenbosch, South Africa, November 8th 2012)
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Open Access and interdisciplinary research
Matthew Cockerill
Managing Director, BioMed Central
10th Berlin Open Access MeetingStellenbosch, South Africa
Thursday 8th November 2012
http://creativecommons.org/licenses/by-sa/2.5
Open access helps eliminate barriers between disciplines
Under a subscription-based model, institutions and departments often only subscribe to essential journals for the specific field
Under open access, research benefits from cross-fertilization with ideas from other areas
Some examples of cross-fertilization…
1. Malaria
By James Gathany (CDC - PHIL) Public domain,
Fields contributing towards under-standing and elimination of Malaria
• Parasitology• Immunology• Epidemiology• Infectious diseases• Clinical trials• Health services research
Malaria Journal’s influence
More than 400 articles published annually The field is now dominated by open
access journals Malaria Journal Parasites & Vectors PLoS One PLoS Neglected Tropical Diseases
Overall, 35% of malaria-related research in PubMed is now immediate open access
2. Veterinary research
By Sigurdas (Wikimedia commons) CC-BY-SA-3.0 http://creativecommons.org/licenses/by-sa/3.0,
Veterinary research is badly served by traditional model
Traditional veterinary journals are infrequently read/cited by non-vets
High quality veterinary research has tended to be published in “basic science” journals
Veterinary medicine and human medical research can benefit by sharing findings
Leading veterinary journals have embraced open access
2000 2001 2002 2003 2004 2005 2006 2007 2008 2009 2010 20110
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Acta Veterinaria Scandinavica(Year of transfer: 2006)
Impa
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acto
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Switched to open access with
BioMed Central
3. Sport science
By Robbie Dale (Flickr: Jess Ennis, Golden Girl) CC-BY-SA-2.0http://creativecommons.org/licenses/by-sa/2.0,
Cross-journal collaboration
4. Biofuels
Biofuels research• Plant
science/genetics/genomics/agronomy (Improving feedstock)
• Microbiology/Biotechnology(Improving processing & fermentation)
• Biochemistry (Re-engineering pathways)• Economics (Land-use change)
5. Flavour research
Research fields relating to Flavour
Chemistry / Biochemistry Neuroscience / Psychology Genetics / Genomics Public Health / Nutrition Obesity Food science Citizen science (chefs and more…)
6. Medical Case Reports
Cases DB
• Thousands of cases from all medical disciplines
• Text-mining enables convenient filtering by diagnosis, treatment, patient age etc
• Includes BioMed Central case reports and OA case reports from other publishers (available under CC license)
Open access and case reports
• Case reports are more useful when aggregated into a coherent database that spans medical disciplines
• Breaks down barriers between medical researchers, specialist clinicians, GPs and patients
7. Genome data
8. Open Data
Data-sharing and data repositories
Have taken off in certain areas Tend to be discipline-specific, e.g.
– Molecular sequence data (protein/dna)– Protein and chemical structures– Spectroscopy data– Biodiversity data– Public/government data
Interoperability is limited
GigaScience
Research involving “big data” Sharing datasets in reusable form
(e.g. the ISA-TAB standard) Using cloud-computing approaches to
allow computational analyses to be easily reproduced and reused
Part of wider ‘open data’ efforts at BioMed Central
Summary
Research rarely falls clearly into discrete disciplinary categories
The pen access model facilitates cross-fertilization between fields
Discipline-specific journals need no longer exist in isolation
Interdisciplinary journals are now viable and successful