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THESE FILE CLARIFY YOUR DOUBT ABOUT THE GENE SUBSTRACTION METHODS....
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GENE SUBTRACTION
PRESENTED BYHARIS.P & ARUN C.S
MSC.BIOTECHNOLOGYMAC & AL-AZHAR
ERNAKULAM
INTRODUCTION
• GENE CLONING ENABLES DIRECTED CHANGES IN THE GENOTYPE OF PLANTS.
• PROJECTS ARE CARRIED OUT BY EXPLOITING THE POTENTIAL OF GENE ADDITION AND GENE SUBTRACTION.
• GENE ADDITION,CLONING IS USED TO ALTER PLANT CHARACTERISTICS BY PROVIDING MORE NEW GENES.
• GENE SUBTRACTION,INACTIVATION OF EXISTING GENES.
GENE SUBTRACTION
• NOT THE REMOVAL OF GENE BUT MERELY ITS INACTIVATION• GENE SUBTRACTION IS DONE BY ANTISENSE TECHNIQUE • RNA PRODUCED BY THIS TECH IS ANTISENSE RNA(asRNA)
ANTISENSE TECHNOLOGY
• GENE TO BE CLONED IS LIGATED INTO VECTOR IN REVERSE ORIENTATION.
• WHEN THIS CLONED GENE IS TRANSCRIBED,THE RNA SYNTHESISED IS THE REVERSE COMPLEMENT OF THE mRNA FROM THE NORMAL SEQUENCE
• THIS ANTISENSE RNA CAN PREVENT SYNTHESIS OF THE PRODUCT OF THE GENE WHICH IS DIRECTED AGAINST,THIS IS DUE TO THE HYBRIDIZATION BETWEEN ANTISENSE AND SENSE COPIES
• THIS BLOCK THE EXPRESSION BY DEGRADING DOUBLE STRANDED RNA BY CELLULAR RIBONUCLEASES
• PREVENTS RIBOSOMAL ATTACHMENT TO SENSE STRAND.
ANTISENSE RNA Gene in the correct orientation
promoter transcription
mRNA
Gene in the reverse orientation promoter
transcription Antisense RNA
INHIBITION OF GENE EXPRESSION BY ANTISENSE RNA
mRNA
antisense RNA
• I I I I I I I I I I I I I I I I mRNA• I I I I I I I I I I I I I I I I as RNA
• degraded by ribosomes• ribonucleases cannot attach
APPLICATION SLOW RIPENING TOMATOS
1. INACTIVATION OF POLYGALACTURONASE GENE • POLYGALACTURONASE ENZYME BREAKS DOWN THE
POLYGALUCTURONICACID COMPONENT OF CELLWALL.• PARTIAL INACTIVATION INCREASES THE TIME BETWEEN FLAVOUR
DEVELOPMENT AND SPOILAGE.
METHOD • OBTAIN 730bp RESTRICTION FRAGMENT FROM NORMAL
POLYGALACTURONASE GENE.• ORIENTATION OF FRAGMENT WAS REVERSED.• PROMOTER LIGATED TO THE START OF SEQUENCE
•
• POLYADENYLATION SIGNAL IS ATTACHED TO THE END.
• INSERTED THE CONSTRUCTION INTO A PLASMID VECTOR.
• INSIDE THE PLANT IT SYNTHESIS ANTISENCE RNA COMPLEMENTARY TO POLYGALACTURONACE mRNA .
• THIS PREVENTS TRANSLATION OF TARGET mRNA.
CONSTRUCTION OF ANTISENSE POLYGALACTURONASE.
polygalacturonase gene
R R
restriction ,ligation to control sequences in the reverse orientation
promoter antisense polygalacturo- polyadenylation signal nase gene
2. INACTIVATION OF ETHYLENE SYNTHESIS• ETHYLENE ACTS AS A HORMONE INVOLVING IN
THE LATER STAGE OF RIPENING.• METHOD S-ADENOSYLMETHIONINE ACC SYNTHASE
1-AMINOCYCLOPROPANE-1-CARBOXYLIC ACID (ACC)
ETHYLENE
• INACTIVATION OF ACC SYNTHASE ENZYME LEADS TO THE DECREASE IN PRODUCTION OF ETHYLENE.
OTHER EXAMPLES TARGET GENE
1. POLYGALACTURONASE
2. OXIDASE
3. STARCH SYNTHASE
MODIFIED CHARACTERISTICS
DELAY OF FRUIT SPOILAGE IN TOMATO
PREVENTION OF DISCOLORATION IN FRUITS AND VEGETABLES.
REDUCTION OF STARCH CONTENT IN VEGETABLES.