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Oral Microbial Ecology

Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

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Page 1: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Oral Microbial Ecology

Page 2: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Ecology

Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions organisms have with each other and with their abiotic environment;

The ecosystem is composed of microbial communities living on specific sites surrounded by a different physical and chemical elements.

Page 3: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

 Ecosystems

 Ecosystems are composed of dynamically interacting parts including organisms, the communities they make up, and the non-living components of their environment;

Ecosystem processes, such as primary production, nutrient cycling, and various niche construction activities, regulate the flux of energy and matter through an environment.

Page 4: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Econiche

Definitions of  Hutchinson:“The set of biotic and abiotic conditions in

which a species is able to persist and maintain stable population sizes."

Page 5: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Niche

In ecology, a niche is a term describing the way of life of a species;

Each species have a separate, unique niche; The ecological niche describes how an organism

responds to the distribution of resources and competitors (e.g., by growing when resources are abundant, and when predators, parasites and pathogens are scarce) and how it in turn alters those same factors (e.g., limiting access to resources by other organisms, acting as a food source for predators and a consumer of prey).

Page 6: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Termite

Termite mounds with varied heights of chimneys regulate gas exchange, temperature and other environmental parameters that are needed to sustain the internal physiology of the entire colony.

Page 7: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Microflora

Living microorganisms that are so small that they can be seen only with a microscope and that maintain a more or less constant presence in a particular area;

Includes bacteria, viruses, protozoa, fungi.

Page 8: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Oral microflora

Oral microflora refers to the community of microorganisms coexisting in the oral cavity as its primary habitat;

These strains of bacteria colonize the various different surfaces present in the oral cavity, and communicate between each other through complex cell signaling processes;

The body’s own defenses also play a role in maintaining a balance and ensuring a healthy oral environment.

Page 9: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Normal - resident flora

In a healthy body, the internal tissues - blood, brain, muscle, etc., are normally free of microorganisms;

However, the surface tissues - skin and mucous membranes, are constantly in contact with environmental organisms and become readily colonized by various microbial species;

The mixture of organisms regularly found at any anatomical site is referred to as the normal flora or resident flora, some researchers prefer the term "indigenous microbiota".

Page 10: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Resident microflora

Typical microflora of a econiche;Microorganisms are separated and grouped

according to the different conditions of life;Resident microflora has an important

function in host: Digestive and nutritional; Competition with pathogenic microflora.

Page 11: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Transient Microbiota

Transient microbes are just passing through;Although they may attempt to colonize the

same areas of the body as do resident microbiota, transients are unable to remain in the body for extended periods of time due to: Competition from resident microbes; Elimination by the body’s immune system; Physical or chemical changes within the body that

discourage the growth of transient microbes.

Page 12: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Opportunistic microbes

Under normal conditions, resident and transient microbes cause the host no harm;

However, if the opportunity arises, some of these microbes are able to cause disease and become opportunistic pathogens.

Page 13: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

This can happen due to a number of different conditions:

When the immune system isn’t working properly, normal flora can overpopulate or move into areas of the body where they do not normally occur;

When the balance of normal microbes is disrupted, for example when a person takes broad spectrum antibiotics, microbes that are normally crowded out by resident microbes have an opportunity to take over;

Disease can result when normal flora are traumatically introduced to an area of the body that they do not normally occur in.

Page 14: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Endogenous microflora

 That is microflora already present in the body, but has previously been inapparent or dormant.

 Bacterial flora is endogenous bacteria, which is defined as bacteria that naturally reside in a closed system.

Page 15: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Exogenous microflora

Exogenous bacteria are microorganisms introduced to closed biological systems from the external world;

 They exist in aquatic and terrestrial environments, as well as the atmosphere;

Microorganisms in the external environment have existed on Earth for 3.5 billion years;

 Exogenous bacteria can be either benign or pathogenic.

Page 16: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

The origin of Oral Microflora

The microflora present in our mouths is acquired from birth, as newborn babies have no bacteria in their mouths;

Over time, the oral cavity becomes colonized by the strains of bacteria that eventually form the resident microflora, which establish a permanent population in the mouth;

Over time as the individual is further exposed to external sources of bacteria, the biodiversity of the oral cavity increases, to a point where stability is reached.

This is termed the climax community.

Page 17: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

The source of microorganisms

The source of these microorganisms mainly comes from saliva, although it also includes the food and water consumed by the individual;

This process takes place within the first few hours of life;

Majority of children obtain their resident microflora from their mothers, as they often possess identical strains of bacteria;

This is known as vertical transmission; Horizontal transmission also takes place as

children interact with their peers, and later in life between spouses and partners.

Page 18: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Formation of the ecosystem

The development of microbial community comprises an alternation of populations;

The process starts with the colonization of the environment of the first microbial population;

It fills the new space, modify it and makes it convenient for resettlement of new microbial population.

Page 19: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

This process continues

Growing microbial community was enriched with different species living in complex;

The process of alternation of populations and enrichment of the community stops only when no available niches for colonization of new microbial species.

Page 20: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Climax community

The settlement of all econiches occurs relative stability of the system by the microorganisms – called climax community;

The stability of the community is based on the homeostasis, including compensatory mechanisms against the effects of various factors.

Page 21: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Bacteria during the life cycle

Oral colonization begins in the birth canal: Populations on the tongue and mucosa; Established during infancy - include anaerobes;

Tooth eruption provides non-shedding surfaces: The “window of infectivity” concept; Colonization from source sites and caregiver saliva;

Hormonal shifts - puberty and pregnancy: Can alter proportions of Gm- anerobes;

Complete loss of teeth shifts flora towards infant state: Dentures restore supragingival non-shedding sites; Implants restore supra- and subgingival sites.

Page 22: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Microflora at birth

At birth, the oral cavity is composed only of the soft tissues of the lips, cheeks, tongue and palate, which are kept moist by the secretions of the salivary glands.

At birth the oral cavity is sterile but rapidly becomes colonized from the environment, particularly from the mother in the first feeding.

 Streptococcus salivarius is dominant and may make up 98% of the total oral flora until the appearance of the teeth (6 - 9 months in humans).

Page 23: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Periods of formation of the oral ecosystem

The neonatal period: Mostly aerobes; Candida albicans - 54%; Obtained from the mother and the surrounding area;

Period before eruption: Facultative anaerobes and anaerobes; Streptococcus - 90%; Actinomyces; Candida albicans.

Page 24: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

After eruption

The eruption of the teeth during the first year leads to colonization by S. mutans and S. sanguis;

These bacteria require a nondesquamating (nonepithelial) surface in order to colonize;

They will persist as long as teeth remain; Other strains of streptococci adhere strongly

to the gums and cheeks but not to the teeth.

Page 25: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Period after eruption

Anaerobes: Actinomyces; Lactobacillus; Veillonella; Fusiformis; Spirochetes; Candida albicans.

Page 26: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Oral surfaces

The oral cavity contains various different forms of tissue which have different properties;

The microflora in the mouth is distributed according to the different types of surfaces present, which provide each particular species with its optimal growing environment;

Certain breeds of bacteria are dependent on specific surfaces to adhere to.

Page 27: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Diverse ecological niches in the oral cavity

The heterogeneity of tissue types in the oral cavity, such as teeth, tongue and mucosa, means that a variety of sites are available for colonization by oral microorganisms;

Each site has unique characteristics and allows those microorganisms best suited to the environment to inhabit the site;

The role of microorganisms in a habitat is referred as an ecological niche and a number of ecological niches exist in the oral cavity, including supragingival plaque, subgingival plaque and tongue coating.

These ecological niches can be characterized by the environmental factors and the metabolic characteristics of the microbial flora occupying these sites.

Page 28: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Mucosal Surfaces:

These include the palate, cheek and tongue, which have cells which are constantly replaced due to the normal wear-and-tear of the mouth;

The different mucosal surfaces also have different properties which contribute to the presence of different types of bacteria: Areas such as the palate contain keratinized squamous epithelium and

the softer non-keratinized areas such as the cheeks; The tongue is a unique surface with papillary structures, which

provides ample crevices for a wide variety of different strains of bacteria to reside;

The presence of these crypts allows for bacteria to be protected from the normal shedding and removal by saliva flow, and hence species not found elsewhere, such as obligate anaerobes, can be found on the dorsum of the tongue.

Page 29: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Mucosal reservoir sites

Smooth exfoliating surfaces: How do bacteria keep from being swept away?

Some oral species can invade epithelial cells: Requires communication between bacteria and cells; Bacteria “subvert” the cell to take them in:

Take control of the cytoskeleton; Can live and grow inside;

Can direct the cell to export them to other cells;Multi-species intracellular flora resembles

mixed biofilm.

Page 30: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Oral econiches

Hard structures – teeth, providing various locations for colonization: Subgingival; Supragingival;

Soft structures – mucosa: Cheeks, lips, tongue, gingiva, palate; Keratinized and nonkeratinized mucosa; Epithelium of the gingival sulcus.

Page 31: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Mucosa of the gingiva, palate, cheek, floor of the mouth

Streptococcus: S. oralis, S. sanguis;

Neisseria;Haemophilus;Veillonella.

Page 32: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Surface of the tongue

Streptococcus salivarius, S. mitis;Veillonella spp.;Peptostreptococcus spp.Gram + rods - Actinomyces spp.;Gram - rods - Bacteroides spp.;Obligate anaerobes black - rods and

spirochetes associated with periodontal diseases.

Page 33: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Dental econiches

Supragingival plaque: On approximal surfaces; On occlusal surfaces - fissures, pits and grooves; Cervical;

Gram positive MO; Facultative anaerobes:

Streptococcus; Actinomyces;

Gram negative: Veillonella, Haemophilus, Bacteroides

Page 34: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Subgingival plaque

From healthy gingival sulcus isolate: Gram negative rods: Porphyromonas gingivalis; Porphyromonas endodontalis; Prevotella malaninogenica; Prevotella intermedia; Prevotella loesheii; Prevotella denticola.

Page 35: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Subgingival tooth surfaces

Narrow crevice between gingival epithelium and cementum

Low oxygen tensionfavorable for Gm- anaerobes;

Major site for interaction between bacteria and host tissues;

Species mix varies between each side and the center- distinct microenvironments.

Page 36: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Microorganisms in saliva

Depend on the microorganisms of all ecological niches;

Microbial composition of saliva is the most similar to the tongue.

Page 37: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Oral fluids

Oral surfaces washes of two liquids: Saliva; Gingival fluid;

They are the basis for maintaining oral ecosystem: Provide water; Nutrients; Adhesion; Antimicrobial factors.

Page 38: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Pathogenicity of microflora

Microflora usually is non-pathogenic and form an integral part of the host;

The presence of friendly resident microorganisms on oral surfaces contributes to the body’s defense against foreign pathogens, which are generally transient and can give rise to harmful infections.

This is known as colonization resistance;

Page 39: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Function of Microflora

Colonization resistance is firstly achieved through the saturation of oral surfaces with preexisting resident bacteria, which reduces the available sites left for the attachment of exogenous organisms;

Essential nutrients derived from the saliva and various proteins in the oral cavity are also more effectively utilized by the resident microflora, which inhibits infections via competition for resources;

Page 40: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Resident microflora modified the conditions of the mouth

It maintains unfavorable conditions for invading microbes;

Producing substances such as hydrogen peroxide that actively inhibits pathogen growth;

As a result, the harmony between the oral microflora and the body’s natural defenses acts as an effective deterrent to infections, and thus maintains the health of the host.

Page 41: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Variations in Microflora

Everyone has microflora, but it varies between people depending on the condition of their oral cavity;

Not all individuals would have the same microflora profile;

Not all bacteria are ubiquitous in all individuals.

Page 42: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Gingival crevicular fluid:

At the gingival margin, serum flows from the inside the gingiva into the mouth;

The flow of this fluid removes foreign microbes which do not adhere to these surfaces;

For the resident population, the flow of crevicular fluid provides these organisms with a source of nutrition;

They have specialised enzymes which can break down these proteins to provide them with the nutrients necessary for growth.

Page 43: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Teeth and artificial hard surfaces:

Microbes can accumulate on teeth; This generally forms a dense layer of bioflim

known as dental plaque; Fissures and deep grooves in the teeth

provide ideal conditions for the formation and build-up of dental plaque;

Most of the bacteria found in dental plaque is absent in individuals without teeth, such as babies.

Page 44: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

The role of saliva in the maintenance of a healthy oral environment

By acting as a buffer, saliva maintains the pH of the mouth, ensuring the optimal growth of the resident colonies;

Most of the microbes present in the mouth utilize the glycoproteins and proteins in the saliva as their main source of nutrition;

Proteins and glycoproteins of saliva are responsible for the formation of the pellicle, a film on the surface of the tooth enamel where the microorganisms of the microflora can adhere to. 

Page 45: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Salivary flow

It is responsible for the removal of non-endogenous bacteria which is unable to adhere to specific sites in the mouth;

Saliva acts a collector of these cells and facilitates their removal;

Areas which receive markedly less saliva flow, such as deep gingival crevices, proximal spaces and occlusal fissures, tend to have significantly higher levels of bacterial buildup;

Saliva is carrying bacteria - the main source of microbial transmission between individuals;

Saliva also circulates bacteria within the oral cavity, resulting in re-colonization of oral surfaces where the microflora might be removed via mechanical forces such as cleaning.

Page 46: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

The normal bacterial flora of the oral cavity

Benefit from the host who provides nutrients and habitat;

Occupy available colonization sites which makes it more difficult for other microorganisms to become established;

Contribute to host nutrition through the synthesis of vitamins, and they contribute to immunity by inducing low levels of circulating and secretory antibodies that may cross react with pathogens;

Exert microbial antagonism against exogenous species by production of inhibitory substances such as fatty acids, peroxides and bacteriocins.

Page 47: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

The oral flora are the usual cause of various oral diseases

Abscesses, dental caries, gingivitis, and  periodontal disease;

If oral bacteria can gain entrance into deeper tissues, they may cause abscesses of alveolar bone, lung, brain, or the extremities;

Such infections usually contain mixtures of bacteria with Bacteroides melaninogenicus often playing a dominant role;

If oral streptococci are introduced into wounds created by dental manipulation or treatment, they may adhere to heart valves and initiate subacute bacterial endocarditis.

Page 48: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

DEFINITIONS:

• Commensal: An organism living in/on an organism of another species without injuring the host;

Parasite: An organism living in/on and at the expense of another organism (the host). Equivalent to a pathogen;

Opportunistic Pathogen: A commensal organism that can cause disease in certain circumstances ;

Symbiosis: The mutually beneficial association between two organisms ;

Aerobic Organism: requiring oxygen for growth and replication; Anaerobe: Organism that grows and replicates in the absence of

oxygen; not necessarily killed by oxygen; Strict anaerobe: Anaerobe killed by oxygen; Facultative anaerobe: Organism capable of growth and

replication in the presence or absence of oxygen;

Page 49: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Various streptococci in a biofilm in the oral cavity.

Page 50: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Members of Human Resident oral microflora

Gram-positive bacteria

Aerobes, facultative anaerobes, microaerophils

Anaerobes

Streptococcus Peptostreptococcus

S. anginosus P. anaerobius

S. cricetus P. micros

S. gordonii

S. mitis

S. mutans

S. oralis

S. rattus

S.salivarius

S. sanguinus

S. sorbinus

S. vestibularis

Stomatococcus – S. mucilaginosus

Page 51: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Important Oral Bacteria

1. Gram Positive organisms:• Rods (bacilli), cocci or irregular shape (pleomorphic);• Oxygen tolerance varies from aerobes to strict

anaerobes; • Most are fermentative;• Cell wall has thick peptidoglycan layer (penicillin has

effect by interfering production of this layer).

Page 52: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Streptococci:

Isolated from all sights of the mouth;Large proportion of resident microflora; Majority α-haemolytic.

Page 53: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Strep mutans:

Associated with caries; Associated with bacterial endocarditis.

Page 54: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Streptococcus mutans. 

Streptococcus mutans is the primary bacterium involved in plaque formation and initiation of dental caries;

  Viewed as an opportunistic infection, dental disease is one of the most prevalent and costly infectious diseases 

Page 55: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Strep salivarius:

Colonise mucosal surfaces especially the tongue.

Page 56: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Strep angiosus:

Isolated dental plaque & mucosal surfaces; Seen in maxillofacial infections, brain, liver

etc.

Page 57: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Strep mitis:

Opportunistic pathogens e.g. endocarditis.

Page 58: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Dental plaque

Scanning electron micrograph illustrating the diversity of microbes in plaque

Page 59: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Three important genera:

Actinomyces, facultative anaerobe; • Lactobacillus, produce lactic acid, facultative

anaerobe, role in dentine caries rather than enamel caries;

• Streptococcus facultative anaerobic cocci, produce lactic acid some implicated in caries.

Page 60: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Lactobacillus species

Lactobacilli in the oral cavity probably contribute to acid formation that leads to dental caries.

Page 61: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Important of Streptococci in the oral and their properties

Important Oral Species

Growth on hard surfaces

Pro-duction of Insol. Extra-cellular Polysa-ccharide

Pro-duction of Acid

Cariogenic

Endo-carditis isolates

S mutans + + + +++ +

S sanguis + + + ++ ++

S mitior +_

+_

+ +_

+++

S milleri + _ + + +

S salivarius

_ _ + _ _

Page 62: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Distribution of Streptococci in the oral cavity

Species Cheek Tongue Saliva Tooth

S.mutans _ _ +/- ++

S. mitior +++ +++ +++ +++

S. salivarius _ ++ ++ _

Page 63: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Biofilm formation 

Biofilms usually occur when one bacterial species attaches specifically or non specifically to a surface, and then secretes carbohydrate slime (exopolymer)  that imbeds the bacteria and attracts other microbes to the biofilm for protection or nutritional advantages. 

Page 64: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Biofilm

The classic biofilm that involves components of the normal flora of the oral cavity is the formation of dental plaque on the teeth;

Plaque is a naturally-constructed biofilm, in which the consortia of bacteria may reach a thickness of 300-500 cells on the surfaces of the teeth;

These accumulations subject the teeth and gingival tissues to high concentrations of bacterial metabolites, which result in dental disease.

Page 65: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Aerobes, facultative anaerobes, microaerophils Anaerobes

Cocci Neisseria

N. flavescens N. mucosa N. sicca N. subflava

Branhamella B. catarrhalis

Veillonella V. atypica V. dispar V. parvula

Gram-negative bacteria

Page 66: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

2. Gram Negative organisms

Many Gram-negative bacteria found in the mouth, especially in established/subgingival plaque;

Cocci, rods, filamantous rods, spindle shaped or spiral shaped;

Range of oxygen tolerance but most important

strict or facultative anaerobes; Some fermentative, produce acids which other

organisms use acids as an energy source, others produce enzymes which break down tissue;

Page 67: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Most important Gram negative bacteria:

Porphyromonas: P. gingivalis major periodontal pathogen; Prevotella: P. intermedia a periodontal pathogen; Fusobacterium: F. nucleatum periodontal pathogen; Actinobacillus/Aggregatibacter: A.actinomycetemcomitans associated

with aggressive periodontitis; Treponema: group important in acute periodontal conditions i.e

ANUG; Neisseria; Veillonella.

Page 68: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Rods

Actinomyces

A. naeslundii

A. odontolyticus

A. viscosus

A. israelii

A. meyeri

Actinomyces and various proteolytic bacteria are commonly found in human carious dentin and cementum, which suggests that they are secondary invaders that contribute to the progression of the lesions

Page 69: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Actinomyces:

Short pleomorphic rods with branching; Major proportion of plaque; Increase in gingivitis; Associated with root caries.

Page 70: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Habitat Comment

Lips, cheek, palate

Tongue

•Biomass limited by desquamation;

•Some surfaces have specialised host cell types;

•Highly papillated surface ;

•Acts as a reservoir for obligate anaerobes .

Microbial habitats

Page 71: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Habitat Comment

Teeth

Gingival crevice /Pocket

Non-shedding surface enabling large masses of microbes to accumulate (dental plaque biofilm);

Teeth have distinct surfaces for microbial colonisation (Smooth surfaces, pits & fissures etc) will support distinct micro flora due to their biological properties;

Health - aerobic, disease - anaerobic.

Teeth and Gingival crevice

Page 72: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Cheeks, lips, palate- descquamation;- Saliva is major

influence;- Microflora has small

deversity;- Sterptococcus spp.

Predominate;- Some periodontal pathogens persist by invading buccal cells

Teeth- Non-shredding

surfaces;- Stagnant sites – food

impaction possible;-Diverse microflora –site

variation;- Many obligate

anerobes;- Influenced by saliva

and GCF;- Streptococcus,

Actinomyces, Veillonella, Fusobacterium,

Prevotella, Treponema, unculturable organisms.

TongueHigh papillated surface;Some anaerobic sites;

Desquamation;Diverse microflora;

Facultative and obligate anerobes;Streptococcus, Actinomyces, Rothia, Nisseria, some Gr-

anaerobes.

Page 73: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

The tongue

A shedding surface;

Structure includes crypts and fissures;

Favorable for Gm- anaerobes.

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Smooth surface plaque

Approximal plaque

Fissure plaque

Supra-gingival plaque

Sub-gingival plaque

Gingival crevice plaque

Page 75: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Factors Affecting Growth of Microorganisms in the oral cavity

1. Temperature; 2. REDOX Potential / Anaerobiosis; 3. pH; 4. Nutrients (endogenous & exogenous (diet); 5. Host Defences (Innate & Acquired immunity); 6. Host genetics (changes in immune response etc); 7. Antimicrobial agents & inhibitors.

Page 76: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Temperature

Relatively constant - 34˚-36 ˚;Life allows a large number of

microorganisms;The temperature is variable on the teeth and

mucosa;When eating microorganisms colonized there

are exposed to extreme temperatures;No evidence of metabolic disorders in

microorganisms to these short periods.

Page 77: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

pH, or hydrogen ion concentration

Affects their metabolism;In the mouth pH varies between 6.7 and 7.3; It is maintained by saliva through:

salivary flow; buffer systems;

In an acid medium in the eco niches are developed: Lactobacillus; Str. mutans;

In the gingival sulcus pH is alkaline -7.5 - 8.5; In the gingival fluid pH is 7,5 - 7,9 . It develops

periodonto-pathogenic microorganisms.

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Redox potential and anaerobiosis

Under the action of the enzymes some of the components are subjected to oxidation, and others to reduction;

These processes depend on the oxygen and are redox potential;

In a predominance of reduction processes have a negative redox potential and develop anaerobic microorganisms;

With positive redox potential are buccal and palatal mucosa and the back part of the tongue;

With negative redox potential are approximal surfaces, fissures and gingival sulcus.

Page 79: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Nutrients

Desquamated epithelial cells;Gingival fluid;Saliva;Residues from host`s food;Products of metabolism of other microbial

species.

Page 80: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Host factors

Host defense mechanisms;Hormonal changes; Stress; Genetic factors.

Page 81: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Relationships with the host

Host defenses in the mouth: Epithelial cells:

Barrier function; Innate immunity - sensors (Toll-like receptors);

Inflammatory mediators, antimicrobial peptides; Salivary antimicrobial factors - DENT 5302; Mucosal antibodies (secretory IgA); Cell-mediated immunity (T-cells);

In most cases, host defenses tolerate oral bacteria The predominant relationships are commensal.

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Host defense mechanisms

Removing the microorganisms through stimulation of salivary flow;

Specific protection: SIg A;

Nonspecific protection: Mucin; Antimicrobial factors:

Lysozyme; Lactoferrin; Salivary peroxidase; Histatine-rich peptides; Cistatin; Leukocytes; Complement.

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Removing of the microorganisms

The majority of microorganisms in the mouth is removed by washing action of saliva;

Salivary flow is stimulated by muscle activity of lips and tongue.

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Specific protection - Secretory IgA system

SIgA-antibodies reduce microbial adhesion to enamel epithelium and through: Neutralizing enzymes microorganisms; Neutralize toxins and viruses;   Synergy with other antibacterial agents such as

lysozyme, lactoferrin, peroxidase and mucin;Protects the mucosa of penetration of

antigens;Helps complement activation.

Page 85: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Mucin

Provides a protective coating of enamel and mucosa;

Catches microorganisms and antigens like in a trap;

Limits microorganisms penetration into tissues;

Eliminates microorganisms with continuous updating of mucin layer combined with washing action of saliva flow;

As part of peliculla protects teeth from demineralization.

Page 86: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Acquired

pellicle

saliva

sIgA

Flow rate;Mucin/agglutinins;Lysozyme-protease-

anion system;Lactoferrin;

Salivary peroxidase system;

Histatin-rich polypeptides.

IgG, (IgA, IgM)

complement polymorphs.------------------

-Gingival

crevicular fluid

Page 87: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Flora of normal, healthy dentate mouth

% (approx) Bacteria

85%

Streptococci Veillonella Gram positive Diptheroids Gram negative anaerobic rods

5-7% Neissaeria

2% Lactobacilli

1% Staphylococci & Micrococci

Remainder Other bacteria, fungi, protozoa & viruses

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Difference between mature supra & sub-gingival plaque

Characteristic Supra gingival Sub gingival

Grams stain Gram + or -ve Mainly Gram –ve

Morphotypes Cocci, branching rods, filaments & spirochaetes

Mainly rods & spirochaetes

Energy Metabolism Facultative, some anaerobic

Mainly anaerobic

Energy source Mainly ferment carbohydrate

Many proteolytic forms

Motility Few Many

Pathology Caries & gingivitis Gingivitis & periodontitis

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Oral flora changes with ageTime during a lifetime

MAJOR COMPONENTS & CHANGES IN ORAL FLORA

Newborn Oral cavity sterile. Soon colonised by facultative and aerobic organisms; esp S. salivarius

6 months Flora becomes more complex & includes anaerobic orgs eg. Veillonella sp. & Fusobacteria

Tooth eruption Increase in complexity. S sanguis, S mutans and A viscosus appear. New habitats include hard surfaces and gingival crevice.

Child to adult Various anaerobes frequently found inc. Members of the Bacteroidaceae. Spirochaetes isolated more frequently

Loss of teeth Disappearance of S mutan, S sanguis, spirochaetes and many anaerobes

Dentures etc Reappearance of bacteria able to grow on hard surfaces

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Oral ecological zones

Mostly the same species present, but proportions differ;

High biomass sites: Non-shedding surfaces:

Supragingival tooth surfaces; Subgingival tooth surfaces;

Shedding surface: The tongue;

Low biomass (reservoir) sites; Shedding oral mucosal surfaces:

Buccal, palate, external gingiva, floor of mouth;Saliva as a transitional zone.

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Ecological succession

1° colonizers (Gram+)Streptococci bind pellicle

proteins from saliva - DENT 5302;

2° colonizers (Gram-)Bridge species - F.

nucleatumBind other bacteria

3° colonizers (Gram-)Porphyromonas gingivalis

Page 92: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Biofilm on tooth surfaces

- The “natural habitat” of most oral bacteria;- A structured multi-species community;- Bacteria embedded in matrix with water channels;- Attachment - growth - ecological succession – maturation.-

Page 93: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Adherence and microcolonies

Biofilms are initiated by bacterial adherence to a surface;

Isolated cells bind receptors on surface;

Replication (growth) is required to form single-species microcolonies;

Growth requires “quorum sensing”.

In vitro biofilm by Streptococcus sanguinisSEM by Tracy Grossman

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Salivary transportQuorum sensing tells

bacteria when to grow, and when it’s time to go;

Bacteria at the outer surface of mature biofilms are signaled to detach and become planktonic;

The goal is to find a new home;

Different genes are active in planktonic and biofilm states.˚Saliva is the transport medium for planktonic oral bacteria:-They don’t grow unless they encounter another surface;˚Exfoliated epithelial cells in saliva can also transport bacteria;-A protected environment.

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Interspecies collaboration - O2

Streptococcus cristatus: Facultative species: Can live w/ or w/o O2;

Uses up O2 when available;

Fusobacterium nucleatum: Robust anaerobe; Binding strep improves

survival when O2 is present;

Porphyromonas gingivalis: Sensitive anaerobe; Coaggregation essential to

survival when O2 is present.

Page 96: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Inter-species competition

Many oral species produce substances that can kill closely related competitors;

Overlay experiment:Streptococcus

sobrinus lawn;Spotted with wild-type

Streptococcus mutans strain producing mutacins I and IV

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Inter-species communication

Streptococci ferment CHO;Excrete lactic acid;Veillonella use lactate made

by Strep for nutrition;They are biofilm buddies.

Strep can make amylase;Starch-digesting enzyme;Enhances lactate excretion;Veillonella send a chemical

signal to activate transcription of Strep amylase gene;

Bacteria sense other species.

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Collaborative invasion

Tissue culture experiment:

F. nucleatum invades epithelial cells;

S. cristatus does not invade cells;

After coaggregation, S. cristatus is carried inside by F. nucleatum.

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Criteria for colonization

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Adhesion

Major milestone allowing resistance of the microorganisms against washing action of the saliva;

Provides from adhesins of the microbial surface and receptors on oral surfaces.

Page 101: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

microbial adhesins

Constructed of: Polysaccharides; Lipoteichoic acid; Glycosyltransferase; Carbohydrate-binding proteins;

They are located in the cell wall in the form of: Fimbriae; Fibrils; Capsules.

Page 102: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

salivary components bacterial components

Mucin;Glycoproteins;Amylase;Lysozyme;IgA, IgG;Proline-rich

proteins.

Glycosyltransferase;Glucans.

Receptors on the oral structures

Page 103: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

MECHANISMS OF ADHESION BYORAL BACTERIA

Adherence mechanisms of oral bacteria are essential to bacterial colonization of the oral cavity;

In their absence, bacteria become part of the salivary flow and are swallowed;

Consequently, oral bacteria have evolved several mechanisms to fulfill this role.

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The first organisms to attach are the primary (early) colonizers and primary colonization is mediated through specific or non-specific physio-chemical interactions with components of an adsorbed, organic conditioning film;

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Mechanism of adhesion

Nonspecific chemical and physical interactions: Example: Lipoteichoic acid at the microbial surface

interacts with the negative charged components of the host by Ca, H ions or hydrophobic coatings;

Then act strong stereo-chemically interactions;

Microorganisms can adhere to the surface of the already colonized microorganisms – coaggregation.

Page 106: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Inter-bacterial coaggregation

1μM 1μM

Streptococcus cristatus coaggregating with F. nucleatum - adhesins interacting with receptors;Coaggregation is important in ecological succession;Fusobacterium nucleatum is considered a bridge species

because it is a promiscuous coaggregator.

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Mechanism of the coaggregation

Coaggregation interactions are believed to contribute to the development of biofilms by two routes: The first route is by single cells in suspension specifically

recognizing and adhering to genetically distinct cells in the developing biofilm;

The second route is by the prior coaggregation in suspension of secondary colonizers followed by the subsequent adhesion of this coaggregate to the developing biofilm;

In both cases, bacterial cells in suspension (planktonic cells) specifically adhere to cells in the biofilm in a process known as coadhesion.

Page 108: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Ecological significance of bacterial coaggregation

Specific coaggregation processes are likely to have an important ecological role as an integral process in the development and maintenance of mixed-species biofilm communities;

Allows adhesion of the microorganisms, who are not able to direct adhesion;

Strengthens bacterial attachment;Increases the stability of the plaque matrix.

Page 109: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

 Bacterial attachment to a surface can be divided into several distinct phases

Primary and reversible adhesion;Secondary and irreversible adhesion;Biofilm formation.

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Adhesion is dependent on:

A contact: Start of interaction;

A dose: There is a certain amount of micro-organisms;

Frequency of exposure: Partial colonization;

Adsorption: By electrostatic forces to the surface of pellicle; With specific receptors on the cell surfaces; With fibrillere coupling end.

Page 111: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Retention

Adaptation;Growth;Reproduction;Accumulation.

Page 112: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Ecological relationships

Independence Life free from influences, management or control of

other organisms;Favorable relationships – commensal;

One type of benefit, but others did not suffer;Pathological.

Page 113: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Microbial relationships

There are a complex of relationships between different microbial species: Neutral; Antagonistic microbial interactions; Synergistic.

Page 114: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Neutral

Relationship between two species living together without affecting each other - neither favorable nor unfavorable.

Page 115: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Synergy

Relationships between the two microbial species living together, wherein both are mutually favored, leading to enhancement of the effects of each of these.

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Example of synergy

Various microorganisms may cooperate to use substances which are not able to metabolise themselves; P. gingivalis and F. Nucleatum are unite to hydrolyze

casein.

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Antagonism

Relationship of two microbial species living together, yielding inhibition of their function, and less effect on the independent operation of each one of them.

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Mechanisms of microbial antagonism

Competition for adhesion receptors;Competition for nutrients;Production of inhibitory substances:

Organic fatty acids; Hydrogen peroxide: Dairy complex; Antibiotics; Enzymes; Bacteriocins.

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An example of microbial antagonism

S. mutans and Lactobacillus produce lactic acid;

It is caused an acidic environment;It inhibits the growth of S.sanguis and S.

oralis, and gram negative microorganisms;Separation bacteriocins inhibit gram positive

microorganisms.

Page 120: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Host – microorganisms relationships

Symbiosis;Comensal;Mutualism;Parasitism.

Page 121: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Symbiosis

Symbiotic relationships include those associations in which one organism lives on another, or where one partner lives inside the other .

Page 122: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Commensalism

Commensalism describes a relationship between two living organisms where one benefits and the other is not significantly harmed or helped;

Commensal relationships may involve one organism using another for transportation or for housing , or it may also involve one organism using something another created, after its death.

Page 123: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Mutualism

Mutualism is any relationship between individuals of different species where both individuals benefit;

During mutualistic symbioses, the host cell lacks some of the nutrients, which are provided by the endosymbiont;

As a result, the host favors endosymbiont's growth processes within itself by producing some specialized cells;

These cells affect the genetic composition of the host in order to regulate the increasing population of the endosymbionts and ensuring that these genetic changes are passed onto the offspring via vertical transmission. 

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Mutualistic relationship

Coaggregating cells can possess a combined metabolic advantage over single cells;

Mutualistic relationship that allowed each to grow where neither grew alone;

Example: coaggregating partnership of S. oralis and Actinomyces naeslundii formed a nutritionally beneficial, mutualistic relationship that allowed each to grow where neither grew alone.

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Parasitism

A parasitic relationship is one in which one member of the association benefits while the other is harmed;

 This is also known as antagonistic or antipathetic symbiosis.

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Influence of external factors

Diets;Oral hygiene and antimicrobial agents;Drugs and diseases.

Page 127: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Diets

Food high in carbohydrates increases the development of Str. mutans and Lactobacillus;

A diet high in protein inhibits the development of Lactobacillus.

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oral Hygiene

Good oral hygiene: Facultative aerobes; Acidogenious microorganisms;

Neglected oral hygiene: Anaerobes; Proteolytic microorganisms.

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Antimicrobial agents

Fluorides have depressing effect on microbial p-ment;

Reducing sugar transport;Reduce their glycolytic activity;Suppress the acid tolerance of gram +

microorganisms,

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Drugs and diseases

Patients with reduced salivation have reduced capacity to remove sugars, reduced buffering capacity and reduced protection;

Antibiotics suppress the resident microflora, leading to over-development of antibiotic resistant species - Candida and allow colonization of exogenous pathogens such as Enterobacteriaceae.

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Beneficial effect of the microflora on the body

Prevention of exogenous and endogenous infections;

Stimulating an immune response;Renewal and healing of the epithelium;Delivery of certain biological factors to the

host.

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Adverse effects

Source of endogenous infection;Change the local environment to

physiological conditions facilitating exogenous microbial overdeveloped;

Create hypersensitivity in macroorganism to microbial agents.

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Protective mechanisms in the mouth

Page 134: Oral Microbial Ecology. Ecology Ecology (from Greek) is the scientific study of interactions among organisms and their environment, such as the interactions

Protective mechanisms in the mouth

1. Protection of enamel;2. Protection of the oral mucosa;3. Protection of the oral physiological fluid;4. Protective mechanisms of microbial life.

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Enamel Protection

Protects underlying tooth structure and tissue;

Provides the physiological mineralization;Opportunity for remineralization.

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Protection of the oral mucosa

Protection of the epithelium by keranitization cell exfoliation Renewal and regeneration intercellular connections Relationship between cell layers Langerhans cells receptors

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Protection of other layers of the mucousa

Basement membrane: Lamina Propria:

Connective tissue cells; Blood element;s Collagen fibers; Matrix;

Receptors;Innervation.

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Protection of the physiological content - saliva

Mechanical washing;Salivary anti-caries activity;Buffer systems;Immunoglobulins;Enzymes.

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Protective mechanisms of gingival fluid

Microphages;Macrophages;Immunoglobulins;Urea;ALP;Lysozyme;Lactoferrin;Epithelial timoactive factor.

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Protective mechanisms of microorganisms

Prevention of exogenous and endogenous infections;

Renewal and healing of the epithelium;Stimulating an immune response;Development of oral tolerance;Delivery of certain biological factors to the

host.