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MOLECULAR CELL BIOLOGY CONCENTRATION Director: Dr. Alexander M. Ishov Associate Director: Dr. Eric A. Vitriol Basic Science Department: Anatomy & Cell Biology Department Chair: Dr. Yehia Daaka

MOLECULAR CELL BIOLOGY CONCENTRATION - … · genetics, biochemistry, molecular biology, immunology, and developmental biology What is Cell Biology? ... Started IDP: August 2008;

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Page 1: MOLECULAR CELL BIOLOGY CONCENTRATION - … · genetics, biochemistry, molecular biology, immunology, and developmental biology What is Cell Biology? ... Started IDP: August 2008;

MOLECULAR CELL BIOLOGY CONCENTRATION

Director: Dr. Alexander M. Ishov

Associate Director:Dr. Eric A. Vitriol

Basic Science Department:Anatomy & Cell Biology

Department Chair: Dr. Yehia Daaka

Page 2: MOLECULAR CELL BIOLOGY CONCENTRATION - … · genetics, biochemistry, molecular biology, immunology, and developmental biology What is Cell Biology? ... Started IDP: August 2008;

• Cell biology studies cells – their physiological properties,their structure, the organelles they contain, interactions withtheir environment, their life cycle, division and death

• Knowing the components of cells and how cells work isfundamental to all biological sciences

• Therefore, research in cell biology is closely related togenetics, biochemistry, molecular biology, immunology, anddevelopmental biology

What is Cell Biology?

Page 3: MOLECULAR CELL BIOLOGY CONCENTRATION - … · genetics, biochemistry, molecular biology, immunology, and developmental biology What is Cell Biology? ... Started IDP: August 2008;

Variety of research projects:

Cellular structure, organization and function

Microbes, insect, yeast, mammals

Stem cells, somatic cells, tumor cells

Transgenic animals

Cell Biology of Diseases:

Cancer biology and therapeutics

Aging, diabetes, immunity, angiogenesis, viral infection

MOLECULAR CELL BIOLOGY CONCENTRATION

Page 4: MOLECULAR CELL BIOLOGY CONCENTRATION - … · genetics, biochemistry, molecular biology, immunology, and developmental biology What is Cell Biology? ... Started IDP: August 2008;

• 12 Graduate students

National and International

• Over 60 Faculty members

MOLECULAR CELL BIOLOGY CONCENTRATION

Page 5: MOLECULAR CELL BIOLOGY CONCENTRATION - … · genetics, biochemistry, molecular biology, immunology, and developmental biology What is Cell Biology? ... Started IDP: August 2008;

MOLECULAR CELL BIOLOGY CONCENTRATION

Department Faculty Students

1) Anatomy Maria Zajac-Kaye Kelly Maengand Cell Biology Maria Zajac-Kaye Daniel Shabasvilli

Yehia Daaka Allyson SheaYehia Daaka Joseph BlackYi Qiu Johnson, AltaDaiqing Liao Iqbal Mahmud

2) Medicine Marck Brantly George Marek

3) Mol Gen Edward Scott Anna Rodgers& Micro

4) Pathology Naohiro Terada Joonseok Cho

5) Aging Shinichi Someya Mi-Jung Kim

6) Periodontology Ozlem Yilmaz Joann RobertsKevin Mchugh Ibraheem Bamaga

Page 6: MOLECULAR CELL BIOLOGY CONCENTRATION - … · genetics, biochemistry, molecular biology, immunology, and developmental biology What is Cell Biology? ... Started IDP: August 2008;

• Core IDP curriculum

• Advanced MCB curriculum Advanced Cell Biology: 4 credits, required for all MCB

students, Spring semester 3 more MCB credits

• Journal club:Molecular Cell Biology

• Data Club: semi-monthly, 45’ presentation, 15’ discussion

• Regular Committee Meetings (2/year)

• At least 1 first authorship paper

• At least 1 poster at national/international conference

MOLECULAR CELL BIOLOGY CONCENTRATION

Page 7: MOLECULAR CELL BIOLOGY CONCENTRATION - … · genetics, biochemistry, molecular biology, immunology, and developmental biology What is Cell Biology? ... Started IDP: August 2008;

Advanced MCB curriculum

Fall Semester:• Transcriptional Control of Growth & Proliferation• Organization of Cells and Tissues• Integrative Aging Physiology• Mitochondrial Biology in Aging and Disease• The Nucleus

Spring Semester:• Advanced Cell Biology• RNA Interference and MicroRNAs• Protein Trafficking• Mechanisms of Aging• Stem Cell Biology• Advanced Stem Cell Biology – Regenerative Medicine• Apoptosis

Page 8: MOLECULAR CELL BIOLOGY CONCENTRATION - … · genetics, biochemistry, molecular biology, immunology, and developmental biology What is Cell Biology? ... Started IDP: August 2008;

• Core IDP curriculum

• Advanced MCB curriculum Advanced Cell Biology: 4 credits, required for all MCB

students, Spring semester 3 more MCB credits

• Journal club:Molecular Cell Biology

• Data Club: semi-monthly, 45’ presentation, 15’ discussion

• Regular Committee Meetings (2/year)

• At least 1 first authorship paper

• At least 1 poster at national/international conference

MOLECULAR CELL BIOLOGY CONCENTRATION

Page 9: MOLECULAR CELL BIOLOGY CONCENTRATION - … · genetics, biochemistry, molecular biology, immunology, and developmental biology What is Cell Biology? ... Started IDP: August 2008;

Former MCB student:Serena Giovinazzi

Mechanisms of Chemotherapy Resistance in Breast Cancer

Started IDP: August 2008; Joined lab: April 2009

Publications:1. Giovinazzi S, et al., Oncogene (2012).2. Giovinazzi S, et al., Cell Death Differ (2013).3. Giovinazzi S, et al., Cell Cycle (2013).4. Giovinazzi S, et al., Oncotarget (2014)

Conferences:American Society for Cell Biology 2011, 2012, 2013American Association for Cancer Research, 2012

Awards:Gold Medal, Medical Guild Research Competition, College of Medicine, 2012

PhD dissertation:March 2012

Current Position:

Postdoc, Florida State University

Page 10: MOLECULAR CELL BIOLOGY CONCENTRATION - … · genetics, biochemistry, molecular biology, immunology, and developmental biology What is Cell Biology? ... Started IDP: August 2008;

Faculty and Research

MOLECULAR CELL BIOLOGY CONCENTRATION

Page 11: MOLECULAR CELL BIOLOGY CONCENTRATION - … · genetics, biochemistry, molecular biology, immunology, and developmental biology What is Cell Biology? ... Started IDP: August 2008;

L. Shannon Holliday, PhDAssociate Professor of Orthodontics and Anatomy & Cell Biology

Exosomes: novel regulators of bone remodeling

Communication between osteoclasts (bone resorbing cells) and osteoblasts (bone forming cells) is vital for the maintenance of healthy bone. We have identified exosomes that are released from osteoclasts as novel regulators of bone remodeling.

Efforts are underway to characterize the composition and regulatory activity of osteoclast-derived exosomes. Communication may involve protein signaling, mRNAs or microRNAs. Funded by R21 DE023900

Page 12: MOLECULAR CELL BIOLOGY CONCENTRATION - … · genetics, biochemistry, molecular biology, immunology, and developmental biology What is Cell Biology? ... Started IDP: August 2008;

12

Name: Shinichi Someya, PhDAssistant ProfessorDepartment of Aging and Geriatric Research

Area of Research:Mechanisms of hearing loss and inner ear aging, Neurodegeneration, Mitochondrial dysfunction

Page 13: MOLECULAR CELL BIOLOGY CONCENTRATION - … · genetics, biochemistry, molecular biology, immunology, and developmental biology What is Cell Biology? ... Started IDP: August 2008;

Role of Autophagy in Cancer and Cardiovascular Disease

Project 1: Autophagy is a constitutive degradative pathway necessary for cellular homeostasis, but has been exploited by some cancer cells for survival and chemotherapy resistance. We have identified and characterized a novel anti-autophagy compound that effectively suppresses the growth of osteosarcoma and prostate cancer tumors in mouse models.

Project 2: Chronic periodontitis has been linked to atherosclerotic plaques and cardiovascular disease. We have shown that P. gingivalis, a bacterium associated with this oral disease, subverts autophagy causing endothelial dysfunction thereby promoting atherosclerosis. Our goal is to modulate autophagy in order to prevent this progressive disease.

William A Dunn, Jr. PhDProfessor, Anatomy and Cell BiologyReyes, L., et al. (2013) Deletion of lipoprotein PG0717 in P. gingivalis W83 reduces gingipain activity and alters trafficking in and response by host cells. PloS One 8(9): e74230.

Akin, D., et al. (2014) A novel ATG4B antagonist inhibits autophagy and has a negative impact on osteosarcoma tumors. Autophagy. 10(11): 2021-35.

Page 14: MOLECULAR CELL BIOLOGY CONCENTRATION - … · genetics, biochemistry, molecular biology, immunology, and developmental biology What is Cell Biology? ... Started IDP: August 2008;

The overall research interest in my lab is to study the function and regulation of epigenetic modifiers in hematopoiesis and other normal or abnormal developmental program.

Yi Qiu, Ph.DAssistant Professor

Ongoing projects:

• Role of histone deacetylase 6 in controlling erythrocyte enucleationprocesses.

• Understanding the function of histone deacetylase 1 in regulating master regulators of erythroid differentiation.

• The function of histone deacetylase 1 in regulating the assembly and recruitment of basal transcription machinery.

• Identification of epigenetic modifiers which are required for cancer stem cells self-renewal.

• Discovery of new histone deacetylase inhibitors for treatment of human cancer.

Page 15: MOLECULAR CELL BIOLOGY CONCENTRATION - … · genetics, biochemistry, molecular biology, immunology, and developmental biology What is Cell Biology? ... Started IDP: August 2008;

Edward K.L. Chan, PhD, ProfessorDepartment of Oral BiologyDepartment of Anatomy and Cell Biologyhttp://edward-chan.dental.ufl.edu/

High miR-21 = poor prognosis in oral cancer patients

Production of TNF-α, IL-1, IL-6 and other cytokines

miR-146a

Bacteria

LPS Flagellin

TLR5

NF-kB

miR-132/-212

CREB

IL-1R

IL-1β

Myd

doso

me

form

atio

n

PGNTLR1/2TLR2/6

miR-155

Macroph

age‐specific?

NF-kB

MD2CD14

TLR4

Gene transcription

TRAF6

IRAK2/IRAK1

IRAK4

MyD88

Innate immuneresponse

Cytokineresponse

Page 16: MOLECULAR CELL BIOLOGY CONCENTRATION - … · genetics, biochemistry, molecular biology, immunology, and developmental biology What is Cell Biology? ... Started IDP: August 2008;

Motor neurons Neuromuscular junctions

Actin polymerization

Actin structures Actin dynamics

Lamellipodia

ALS

The Vitriol Lab

Page 17: MOLECULAR CELL BIOLOGY CONCENTRATION - … · genetics, biochemistry, molecular biology, immunology, and developmental biology What is Cell Biology? ... Started IDP: August 2008;

Alexander M. Ishov Associate Professor,

Anatomy & Cell BiologyE-mail: [email protected]

Research Interests:• Nuclear Structure and Function in

normal and stress conditions• Mechanisms of Chemotherapy

Resistance in Breast Cancer• Epigenetic Regulation of Gene

Expression

USP7 controls mitotic spindle assembly and chemotherapy resistance

Page 18: MOLECULAR CELL BIOLOGY CONCENTRATION - … · genetics, biochemistry, molecular biology, immunology, and developmental biology What is Cell Biology? ... Started IDP: August 2008;

MOLECULAR CELL BIOLOGY CONCENTRATION

Questions?

Contact Info:

Alexander M. Ishov [email protected]

Or

Eric A. Vitriol [email protected]