2
ANTHROPOCENE Time to call time on human impact on planet p.254 WORLD VIEW Protect and pay for seagrass, marsh and mangrove p.255 POSER Cuttlefish finds imitation the sincerest form of protection p.256 There’s a time to be critical An accusation that referees are too demanding and editors too supine demands a response. Authors, editors and referees all have lessons to learn. L ast week one of our editors received the following from a referee of a paper currently under assessment: “I guess the issue with this kind of paper is that there are an almost limitless number of changes/additions that could be made, especially considering the complexity of the data presented here. I suspect that this paper might run into a few reviewer ‘issues’ as it cov- ers so much ground. In my review I have tried to be cognisant of your 27 April Nature article (‘End the wasteful tyranny of reviewer experi- ments’) and as such give this a ‘yes’ vote pending revisions.” In the same week, we received a note from another reviewer to the effect that the “tyranny of reviewer experiments” had significantly increased the impact of the claims made in a manuscript he assessed, and he hoped that the authors would agree that the further work was worth the effort. Clearly, some targets of the Nature article have taken note of it. In brief, that column, by Hidde Ploegh at the Massachusetts Institute of Technology in Cambridge, argued that referees too often ask for more experiments, and that editors too passively tend to pursue such requests (see Nature 472, 391; 2011). But for the paper mentioned above, the question of whether further work is required is still open until the editor decides otherwise. Our editors must ask themselves: would further work lift the paper over a threshold of robustness or significance that justifies publication in Nature, or is it already sufficient? And have other referees differing views about this? In resolving these questions, the editor will discuss the paper with colleagues and also with the referees. The accusation that editors are too passive was not specifically directed at Nature, but we take it seriously. We could too easily dis- count it on several grounds. Surveys of our published authors, as well as general surveys of scientists conducted independently, over- whelmingly support the view that papers have gained in their passage through peer review. Critics do not realize how much discussion and critical assessment underpins our editorial decisions. And without question, the ever-increasing pressure to publish is far too often lead- ing authors to submit papers that would gain substantially in scientific significance with some further work. It is important also to acknowledge that our referees generally put in very substantial amounts of labour on behalf of their fellow scientists, and make constructive suggestions that ensure that some of the extraordinary claims that Nature publishes are backed by the necessary evidence. Nevertheless, a more reflective response is also required. At Nature and at the Nature research journals, our teams of staff editors are expected to make their own conclusive judgements about a paper’s position below or above their journal’s threshold, and will often overrule referees’ expectations in this respect in either direc- tion. For example, we may decide that even if a paper lacks a new Getting personal Targeted therapies work, but need help to fulfil their potential. B iology is like economics, participants at a European Com- mission meeting on personalized medicine in Brussels heard last week: they are both complex and neither is properly understood. The view struck a chord with attending scientists and health-care economists, who felt that personalized medicine should be happening, and didn’t understand why, mostly, it isn’t. Personalized medicine aims to use the latest genomic knowledge and technologies to tailor treatments to individuals. Pivotal to the field are drugs that have been designed to hit a particular molecular pathway that has gone wrong in a disease. The European Medicines Agency has already approved around 15 such drugs for cancer therapy insight into mechanism, it represents a sufficient resource in the novelty of its data or technique to make a significant impact on the discipline. Conversely, we may decide that an additional piece of work would greatly increase a paper’s range or depth of impact, and make that a condition of publication — we hope to the ultimate benefit of the community and the authors themselves (see Nature 463, 850; 2010). But our editors do not necessarily have the expertise to judge whether, for example, an application of a novel technique or reagent has been adequately validated. Authors are free to challenge a request for more work in these circumstances, and an editor may seek technical advice from another expert to resolve the matter. Spurred by this discussion, we looked back at recent decisions. We soon found several cases in which, with technical guidance where necessary, we overruled a referee’s request for additional work — for example, when the editor felt that, contrary to a referee’s assertion, the gain in robustness would not be sufficient to justify the effort and delay. What lessons can be learnt, therefore? By authors: in the interests of robustness and genuine impact, resist the pressure to publish prema- turely. By editors everywhere: don’t be supine in the face of referees’ requests. And above all, by referees: please don’t ignore any impulse to demand more, but be self-critical too. “Referees generally put in very substantial amounts of labour on behalf of their fellow scientists.” 19 MAY 2011 | VOL 473 | NATURE | 253 THIS WEEK EDITORIALS © 2011 Macmillan Publishers Limited. All rights reserved

Getting personal

  • View
    212

  • Download
    0

Embed Size (px)

Citation preview

Page 1: Getting personal

ANTHROPOCENE Time to call time on human impact on planet p.254

WORLD VIEW Protect and pay for seagrass, marsh and mangrove p.255

POSER Cuttlefish finds imitation the sincerest

form of protection p.256

There’s a time to be criticalAn accusation that referees are too demanding and editors too supine demands a response. Authors, editors and referees all have lessons to learn.

Last week one of our editors received the following from a referee of a paper currently under assessment:

“I guess the issue with this kind of paper is that there are an almost limitless number of changes/additions that could be made, especially considering the complexity of the data presented here. I suspect that this paper might run into a few reviewer ‘issues’ as it cov-ers so much ground. In my review I have tried to be cognisant of your 27 April Nature article (‘End the wasteful tyranny of reviewer experi-ments’) and as such give this a ‘yes’ vote pending revisions.”

In the same week, we received a note from another reviewer to the effect that the “tyranny of reviewer experiments” had significantly increased the impact of the claims made in a manuscript he assessed, and he hoped that the authors would agree that the further work was worth the effort.

Clearly, some targets of the Nature article have taken note of it. In brief, that column, by Hidde Ploegh at the Massachusetts Institute of Technology in Cambridge, argued that referees too often ask for more experiments, and that editors too passively tend to pursue such requests (see Nature 472, 391; 2011).

But for the paper mentioned above, the question of whether further work is required is still open until the editor decides otherwise. Our editors must ask themselves: would further work lift the paper over a threshold of robustness or significance that justifies publication in Nature, or is it already sufficient? And have other referees differing views about this?

In resolving these questions, the editor will discuss the paper with colleagues and also with the referees.

The accusation that editors are too passive was not specifically directed at Nature, but we take it seriously. We could too easily dis-count it on several grounds. Surveys of our published authors, as well as general surveys of scientists conducted independently, over-whelmingly support the view that papers have gained in their passage through peer review. Critics do not realize how much discussion and critical assessment underpins our editorial decisions. And without question, the ever-increasing pressure to publish is far too often lead-ing authors to submit papers that would gain substantially in scientific significance with some further work.

It is important also to acknowledge that our referees generally put in very substantial amounts of labour on behalf of their fellow scientists, and make constructive suggestions that ensure that some of the extraordinary claims that Nature publishes are backed by the necessary evidence.

Nevertheless, a more reflective response is also required. At Nature and at the Nature research journals, our teams of staff

editors are expected to make their own conclusive judgements about a paper’s position below or above their journal’s threshold, and will often overrule referees’ expectations in this respect in either direc-tion. For example, we may decide that even if a paper lacks a new

Getting personalTargeted therapies work, but need help to fulfil their potential.

Biology is like economics, participants at a European Com-mission meeting on personalized medicine in Brussels heard last week: they are both complex and neither is properly

understood. The view struck a chord with attending scientists and health-care economists, who felt that personalized medicine should be happening, and didn’t understand why, mostly, it isn’t.

Personalized medicine aims to use the latest genomic knowledge and technologies to tailor treatments to individuals. Pivotal to the field are drugs that have been designed to hit a particular molecular pathway that has gone wrong in a disease. The European Medicines Agency has already approved around 15 such drugs for cancer therapy

insight into mechanism, it represents a sufficient resource in the novelty of its data or technique to make a significant impact on the discipline. Conversely, we may decide that an additional piece of work would greatly increase a paper’s range or depth of impact, and make that a condition of publication — we hope to the ultimate benefit of the community and the authors themselves (see Nature 463, 850; 2010).

But our editors do not necessarily have the expertise to judge whether, for example, an application of a novel technique or reagent has been adequately validated. Authors are free to challenge a request for more work in these circumstances, and an editor may seek technical advice from another expert to resolve the matter.

Spurred by this discussion, we looked back at recent decisions. We soon found several cases in which, with technical guidance where

necessary, we overruled a referee’s request for additional work — for example, when the editor felt that, contrary to a referee’s assertion, the gain in robustness would not be sufficient to justify the effort and delay.

What lessons can be learnt, therefore? By authors: in the interests of robustness and genuine impact, resist the pressure to publish prema-turely. By editors everywhere: don’t be supine in the face of referees’ requests.

And above all, by referees: please don’t ignore any impulse to demand more, but be self-critical too. ■

“Referees generally put in very substantial amounts of labour on behalf of their fellow scientists.”

1 9 M A Y 2 0 1 1 | V O L 4 7 3 | N A T U R E | 2 5 3

THIS WEEKEDITORIALS

© 2011 Macmillan Publishers Limited. All rights reserved

Page 2: Getting personal

The human epochOfficial recognition for the Anthropocene would focus minds on the challenges to come.

Geologists are used to dealing with heavy subjects, so who better to decide on one of the more profound debates of the time: does human impact on the planet deserve to be offi-

cially recognized? Are we living in a new geological epoch — the Anthropocene?

This is no idle conundrum. Although the term has long been used informally to refer to the current, human-dominated phase of Earth’s history, a working group of the International Commission on Strati graphy, the body that defines the divisions of geological time, is studying the case for making it official (see Nature 473, 133; 2011).

The Anthropocene would be a peculiar addition to the geological timescale. So far, it is more a prediction than a fact of Earth’s history, because many of its defining features are only starting to register in the rock record. And the driving force behind the geological transi-tion it labels is not a continental rearrangement, massive volcanism or an extraterrestrial impact — forces that have reshaped the planet in the past. Yet the Anthropocene does deserve proper recognition. It reflects a grim reality on the ground, and it provides a powerful framework for considering global change and how to manage it.

Human activity is set to leave an indelible mark on the geological record. Deforestation, mining and road building have unleashed tides

of sediment down rivers and onto the ocean floor. Fossil-fuel use and land clearance have already emitted perhaps a quarter as much carbon into the atmosphere as was released during one of the greatest plan-etary crises of the past, the Palaeocene–Eocene Thermal Maximum 55 million years ago. Now, as then, corals and other organisms are recording a global carbon-isotope shift. The increasing acidification of the oceans as they absorb carbon dioxide will dissolve carbonate from deep sediments, and what is likely to be the sixth great mass extinction in Earth’s history will gather speed, adding vivid new markers to the record.

But is it too soon to declare an end to the Holocene, the stable, largely benign epoch that has lasted just 11,700 years — a heartbeat in geological time? What impact will an official change in the geological timescale have on the funding and status of Holocene studies? And is it wise for stratigraphers to endorse a term that comes gift-wrapped as a weapon for those on both sides of the political battle over the fate of the planet?

The scale of the changes already under way and the real value of a unified approach to studying human influences on the planet should surely quash these concerns. The Anthropocene is defined not just by climate change or extinctions, but by a linked set of effects on Earth and its biosphere, from perturbations in the nitrogen cycle to the dispersal of species around the globe. Official recognition of the concept would invite cross-disciplinary science. And it would encour-age a mindset that will be important not only to fully understand the transformation now occurring but to take action to control it.

Humans may yet ensure that these early years of the Anthropocene are a geological glitch and not just a prelude to a far more severe dis-ruption. But the first step is to recognize, as the term Anthropocene invites us to do, that we are in the driver’s seat. ■

NATURE.COMTo comment online, click on Editorials at:go.nature.com/xhunqv

and is set to approve several more in the next year or so.The personalized approach faces two major problems: complex

biology and complex economics. The pathway involved is often not well understood, and most targeted drugs are so expensive that health-care systems and insurance companies don’t want to pay for them, even if they reduce waste and should therefore save on overall treatment costs in the long term. The drug gefitinib, for example, costs around €20,000 (US$28,000) per patient and targets the EGFR pathway, which is disrupted in fewer than 15% of patients with lung cancer. What’s more, targeted drugs need to be accompanied by diag-nostic tests to identify suitable patients, yet many health-care systems have no mechanism to pay for the tests. The result is an absurd situ-ation in which expensive drugs can be prescribed without testing, and therefore to some patients who will gain no benefit.

As arguments about the value of personalized medicine rage around the world, France has found its own solution — at least for cancer, where molecular medicine is most advanced. In 2005, the country said it would pay for the treatment of every citizen shown to be likely to benefit from targeted drugs. Its National Cancer Institute set up 28 platforms for molecular genetics at university hospitals and cancer centres with expertise in both molecular and pathological analysis. Biopsies of cancerous tissue from patients all over France are sent to these platforms for a battery of 20 or so genetic tests. If the tissue displays a genetic signature in any molecular pathway targeted by one of the drugs, the patient gets treated with it. The platforms develop the tests themselves, and are already working on a test to accompany a drug that researchers hope will be approved this year for melanoma. Targeted drugs now account for 57% of France’s cancer-treatment budget. The Czech Republic has a similar system.

The model seems to work. The French platforms have so far tested samples from around 15,000 people with lung cancer for alterations in the EGFR pathway. Just over 1,700 patients tested positive and were given gefitinib until they stopped responding (an average of

38 weeks). That has cost France €35 million. Had all 15,000 patients been given an eight-week course of gefitinib just to see whether they would respond, it would have cost the nation another €69 million — with no extra benefit.

Some assessments, however, have concluded that personalized drugs do not offer enough benefit to justify the cost. It will not be easy to persuade the spectrum of state health systems and health-insur-ance companies that personalized medicine makes economic sense. Understandably, they will want a lot more evidence that it works.

Much reluctance also seems to come from a medical profession unused to needing genetic tests to select patients and from inflexible bureaucratic systems. The European Commission’s health directorate could help by encourag-ing European countries to harmonize their health-technology assessments, or even by issuing its own (non-binding) conclusions on which targeted drugs it considers cost-effective. And the commission’s research directorate could provide greater support for efforts to translate the results of pre-

clinical research on molecular pathways into the clinic, which it plans to do in its 2012 call for proposals.

Amid the excitement and attention paid to cancer, it is crucial to remember that other conditions — such as psychiatric disor-ders — carry just as great a societal burden, yet remain too poorly understood to benefit. The research directorate has enabled a great deal of fundamental research on animal models designed to under-stand such complex conditions, and it must continue to do so, in parallel with its translational efforts. We are at the beginning of personalized medicine in the clinic. But we are also just starting to understand the mechanisms behind most of the diseases that are likely to gain the most. ■

“As arguments about the value of personalized medicine rage around the world, France has found its own solution.”

2 5 4 | N A T U R E | V O L 4 7 3 | 1 9 M A Y 2 0 1 1

EDITORIALSTHIS WEEK

© 2011 Macmillan Publishers Limited. All rights reserved