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Page 1: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

http://bioenfapesp.org

FAPESP BIOENERGY PROGRAM BIOEN

Page 2: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Brazilian External Dependence on Oil

2

Page 3: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Brazilian Cane, Sugar and Ethanol Production

First period: “necessity” Now: a great “opportunity”!!

-

100.000

200.000

300.000

400.000

500.000

600.000

74/75 78/79 82/83 86/87 90/91 94/95 98/99 02/03 06/07

Su

ga

rca

ne

(1

t)

-

5.000

10.000

15.000

20.000

25.000

30.000

35.000

Eth

an

ol (1

06 lit

res

) &

Su

ga

r (1

03 t

)

Sugar

Sugarcane

Ethanol

Brazil increased ethanol production and the same time that increased its sugar production

3Source: UNICA

Page 4: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

0%

10%

20%

30%

40%

50%

60%

Non-Renewable Renewable

En

erg

y s

ou

rces i

n B

razil,

2006

47% of Brazil’s energy comes from renewable sources (2009)

4

cane

18%

Renewables in Brazil: 47%; World: 13%; OECD: 7,2%

08082010; Programa FAPESP BIOEN

Page 5: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Energy from renewable sourcesSome industrialized countries

5

Source: IEA, Renewables Factsheet, 2007

10052010;bioenergy-in-brazil-20100510.pptx;CHBritoCruz & BIOEN

Page 6: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Energy CaneSugarcane Mill

Page 7: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Brazilian Bioethanol production costs are the cheapest in the world

Industry estimates the cost of producing ethanol from sugarcane at approximately US$ 0.29/L (1 gallon = US$ 1.00).

(Goldemberg, Nigro e Coelho, 2008).

Page 8: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Total bioethanol production for 2010/11 is projected at 28.5 billion L

Total sugarcane production is estimated to be 664,33 ton/ha for 2010/2011

54,6% (362,8 million tons) for ethanol (20,14 billlion L hydrated and 8,4 billion L anyhidride)

45,4% (301,6 million tons) for sugar (38,7 million tons)

405 plants of which 157 are exclusive to ethanol

Page 9: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Sugarcane for ethanol uses 0.4% of total area

9

Area used for sugarcane for ethanol (3.4Mha, 0.4%)

Area used for agriculture (76.7 Mha, 9%)

Rural properties area (355 Mha, 42%)

Total country area (851 Mha, 100%)

Source: Horta Nogueira e Seabra (2008)

Small bioenergy footprint

Pasture 200 MhaSoya 22 Mha

Page 10: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Average yield 80 ton/hectare

High yield variety: 260 ton/ha in 13 months (commercial at Agrovale, Bahia) and 299 ton/ha (experimental at Fazenda Busato, Bahia)

Page 11: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Sugarcane, the most productive of cultivated plants - a large biomass

Commercial sugarcane is vegetatively propagated through stem cuttings

In 12 months the plant will reach 4-5 meters with the extractable culm measuring 2-3 meters

After harvest, underground buds will sprout giving rise to a new crop (6 harvests)

C4 carbohydrate metabolism - large amount of carbon partitioned into sucrose (up to 42%

of the stalk dry weight, around 0.7 M in mature internodes)

Fonte: International Energy Agencia (2005). *ISPA

Page 12: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Biofuel yield per hectare

12

FAO, “The state of agriculture 2008”

08082010; Programa FAPESP BIOEN

Ethanol

Biodiesel

Page 13: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Produ�‹ o de cana-de-a�œcar no Brasil (milh› es

de toneladas)

0,00

100,00

200,00

300,00

400,00

500,00

1975

1978

1981

1984

1987

1990

1993

1996

1999

2002

2005

Ano

(mil

h›e

s t

on

)

Cultivar Biomass and Ethanol Production in Brazil

70’s

Hoje

82 %

0

5

10

15

20

25

30

35

40

45

50

55

60

65

70

até

1990

1992 1993 1995 1996 1998 1999 2000 2001 2002 2003 2005 2006

Biomass/ha Sugar

Page 14: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Sugarcane improvement is lagging behind

Page 15: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Cellulosic Ethanol

70’s

Today

82 %

In 10 years?

40-60 % 12.000/h

a

Page 16: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

BIOEN DIVISIONS

BIOMASSContribute with knowledge and technologies for Sugarcane ImprovementEnable a Systems Biology approach for Biofuel Crops

PROCESSING AND ETHANOL TECHNOLOGIESIncreasing productivity (amount of ethanol by sugarcane ton), energy saving, water saving and minimizing environmental impacts

ENGINESFlex-fuel engines with increased performance, durability and decreased consumption, pollutant emissions

BIOREFINERIES AND ALCOHOL CHEMISTRYComplete substitution of fossil fuel derived compoundsSugarchemistry for intermediate chemical production and alcoholchemistry as a petrochemistry substitute

IMPACTSStudies to consolidate sugarcane ethanol as the leading technology path to ethanol and derivatives productionHorizontal themes: Social and Economic Impacts, Environmental studies and Land Use

Page 17: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

6 Calls for Projects

55 projects granted118 fellowshipsR$ 57 million (FAPESP)

2 9

5

13

3

10

30

46

118 Fellowships

Fellowship (Visiting schollar)

Fellowship (PhD)

Fellowship (Direct PhD)

Fellowship (Scientific Initiation)

Fellowship (Young Researcher)

Fellowship (Masters)

Fellowship (Post-doc)

6

8

25

16

55 Grants

Grant (Young Researcher)

Grant (PITE)

Grant ("Temático")

Grant (Regular)

Page 18: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

30% of the projects are related to Chemistry

0 5 10 15 20 25 30 35

Agronomy

Biophysics

Biochemistry

Botany

Information Technologies

Food Technologies

Ecology

Economy

Materials Engineering

Mecanical Engineering

Nuclear Engineering

Chemical Engineering

Environmental Engineering

Pharmaceutical sciences

Physics

Genetics

Geosciences

Interdisciplinary

Mathematics

Microbiology

Chemistry

Série1

Page 19: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

6 Calls for Projects

5 DivisionsR$ 57 million (FAPESP)

13.066.846

30.538.839

3.327.769

3.325.014

Budget grants

Biofuel Technologies

Biomass

Biorefinery

Impacts

19

20

6

8

1

DIvisions

Biofuel Technologies

Biomass

Biorefinery

Impacts

Engines

Page 20: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

314 researchers under the BIOEN Program

84%

8%

2%

BRAZIL

USA

FRANCE

GERMANY

THE NETHERLANDS

DENMARK

SPAIN

AUSTRALIA

AUSTRIA

CHINA

FINLAND

PORTUGAL

BRAZIL 262

USA 26

FRANCE 7

GERMANY 4

THE NETHERLANDS 4

DENMARK 3

SPAIN 3

AUSTRALIA 1

AUSTRIA 1

CHINA 1

FINLAND 1

PORTUGAL 1

Page 21: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

52 foreign researchers from 36 institutions

BIOEN Foreign Partners (11 countries)

AUSTRALIA2%

AUSTRIA2%

CHINA 2%

DENMARK6%

FINLAND2%

FRANCE13%

GERMANY7%

PORTUGAL2%

SPAIN6%

NETHERLANDS9%

USA50%

AUSTRALIA

AUSTRIA

CHINA

DENMARK

FINLAND

FRANCE

GERMANY

PORTUGAL

SPAIN

THE NETHERLANDS

USA

USA 26

FRANCE 7

GERMANY 4

THE NETHERLANDS 4

DENMARK 3

SPAIN 3

AUSTRALIA 1

AUSTRIA 1

CHINA 1

FINLAND 1

PORTUGAL 1

TOTAL 52

Page 22: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

State of São Paulo Bioenergy Research Center

• Proposed by FAPESP, USP, Unicamp and UNESP to the State of São Paulo government

• BIOEN Research Areas

• Investment (R$ 165 million)

– R$ 55 million from the State Government (R$ 45 M already committed)

– R$ 55 million from the Universities

– R$ 55 million from FAPESP

23092009; FAPESP BIOEN22

Page 23: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

BIOMASS DIVISION

Improvement of Biomass (Agronomy, Breeding, Biotechnology)Identify new paths to genetically manipulate the energy metabolism of cultivated

plants, creating new biofuel alternatives

Contribute with knowledge and technologies for Sugarcane ImprovementEnable a Systems Biology approach for Biofuel Crops

• Uncover metabolic networks related to the production of carbohydrates and sucrose through the use of “omics” technologies• Integrate the results in a single platform and develop bioinformatic tools to assess the information• Discovery of genes associated with agronomic characteristics of interest• Development of new sugar cane cultivars• Signaling, regulation of gene expression and regulatory networks• Genetic transformation of sugarcane and other grasses • Molecular markers, statistical-genetics, mapping and breeding• Sequencing, physical, genetic and molecular mapping of genomes • Understand cell wall structure, architecture and biological function• Discover new cellulolytic fungi species capable of degrading biomass• Refine field practices for enhancing crop production including soil management, fertilization and precision agriculture• Improve control of weed, pests, and diseases though chemical or biological control, resistant varieties and field practices

Page 24: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Brazil has great tradition in sugarcane cultivation

(since 1532)

• 8.0 million ha

• World leader

• Several public and private institutions

dedicated to P&D

• Very competitive costs and production

technology

• Breeding Programs (since 1910)IAC (1934)

Campos (1946-1972)

CTC (ex Copersucar, 1968)

Ridesa (1971)

Canavialis (2003)

Fertilizer experiments. IAC, 1938

Sugarcane production

Page 25: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Domestication and early evolution of sugarcane

Saccharum

officinarum

Chewing

Saccharum sinence

Saccharum barberi

(crosses to wild relatives

natural hybrids)

Sugar extraction

SE Asia

Pacific Islands

Intertropics Persia

Manufacturing

Mediterranean

Spain

Canary

Madeira

West Africa

Cottage

industries

World

trade

plantation

factories

Saccharum

officinarum

clones

Dominican

Republic

Brasil

S. officinarum X

S. spontaneum

(interspecific

hybrids)

Java

India

Modern

Breeding

Mo

dern

su

garc

an

e c

ult

ivars

Page 26: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Interspecific breeding: a major breakthrough in modern sugarcane breeding

Solved some of the disease problems but also provided increased yields,

improved ratooning ability and adaptability for growth under various stress

conditions

Genome organization of a

modern cultivar

Each bar represents a

chromosome

Chromosomes in the same

column are homologuesS. officinarum

S. spontaneum

Contributing genera: Saccharum, Erianthus, Miscanthus, Sclerostachya and Narenga

Saccharum genus (six polyploid taxonomic groups):

Wild species Early cultivars Marginal species

S. spontaneum (2n=40 to 128) S. officinarum (2n= 80) S. edule (2n = 60 to 122))

S. robustum (2n= 60, 80 and up to 200) S. barberi (2n=81-124)

S. sinense (2n=116-120)

Giant Genome (n 750-930 Mpb) Polyploid (2n = 70-120 cromossomos) ~10 Gb

Page 27: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

50 labs

200 researchers

238000 ESTs

43000 Transcripts

The SUCEST EST Sequencing Project

26 libraries - 13 cultivars - Over 90% of sugarcane genes tagged

Page 28: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Defining Initiatives for Sugarcane Genomics and Biotechnology in Brazil

Page 29: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

R570 BAC Library

R570 BAC library (HindIII)= 103,296 clones(Tomkins et al, 1999, TAG)1.3x total genome equivalent14x basic genome equivalent

http://bacman.sourceforge.net

Screening for gene-rich regions by membrane hybridization, overgo or 3D-pools

Page 30: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Statistics of Align - Sequences = 15

Identical Sites = 133,845 (97.4%) - Pairwise % Identity = 67.6% - Freq % of non-gaps = A: 43,107 28.5%; C: 33,665 22.3%; G: 34,215 22.6%; T: 40,174 26.6%; N: 3 0.0% GC: 67,880 44.3%

Finding the 5´ and 3´ UTRs and promoter regions using sorghum as reference

BAC by BAC Structural Annotation

[ BAC_NAME] Shcrba_022_o20

[Annotation_Ref_Gene_1] Replication protein A 70kDa

[Synonyms] REPA1, Replication factor A protein 1, Replication protein A 70 kDa DNA-binding

[Zea_mays_gene] GRMZM2G115013 [Sorghum_bicolor_Genomic_Blastn] Chr 4 [Sorghum_Bicolor_Gene] Sb04g034780 [SEQ_GENE]

gtggtagtt... [SEQ_5Kb_5’UTR] tgg... [SEQ_5Kb_3’UTR] tgg... [ORIENTATION] (+/-) [LINK_GBROWSE] http://...

Page 31: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

dec/10 assembly

A

B C D

EF

G

H

Shotgun sequencing of sugarcane genome (SP80-3280)

Leaf DNA from the sugarcane variety SP80 3280 was broken into 500 to 1000 bp fragments (average ~650 bp) and sequenced using 454

10 runs were made using 2 gaskets

~11 million reads were obtained

~3.5 Gbp were sequenced

8 contigs align to SbGI; 96% identity 71% coverage

Page 32: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

A draft of the sugarcane monoploid genome (1 Gb)

Genome organization of a

modern cultivar

Each bar represents a

chromosome

Chromosomes in the same

column are homologuesS. officinarum

S. spontaneum

Giant Genome (n 750-930 Mpb) Polyploid (2n = 70-120 cromossomos) ~10 Gb

Page 33: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Area Crossings

Bi-parental Crossings

Multiple Crossings

Breeding

Seedlings

Page 34: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

New Varieties

13 clones in

final phase

168 clones in

Experimental Trials

619 clones in T3

6.792 clones in T2 (1.349 Clones Brix > RB855156)

398.477 Seedlings in T1

Total: 406,069 genotypes

2006

12 years

Selection

Page 35: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Sugarcane Map incorporating double and triple dose markers (SSR, EST-SSR, RFLP)

Mollinari, M; Silva, RR; Margarido, GRA; Marconi, TG; Souza, AP; Garcia, AAF

SP80-180 x SP80-4966, 200 individuals

934 markers

Final map with 347 linked markers329 single dose (239 1:1 and 90 3:1)16 double dose 2 triple doseAssembled in 102 linkage groupsThe total map length 2,880.3 cM (4,361.3) with a density of 7.6 cM (11.6)

Page 36: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Setting up the priorities

Page 37: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

1 – Gene DiscoveryGenes associated to agronomic traits of interestGene function evaluationC4 model plant system2 – PhysiologySucrose metabolism, carbon partitioning, photosynthesis, stress responses3 - Genome SequenceFull length transcriptsSurveys of several genomes Gene enrichment methods for regions to be sequenced BAC library with 10x coverageBAC screening mthods4 - International Bioinformatics International Consortium5 – TransgenicsExpression vectorsComplete ORFeomePromotersScreening methods for phenotyping (metabolomics, qPCR, biochemical assays, cell wall)6 - Marker identificationIntegrated databases and translation of transcriptome data to marker assays

Biotechnological Roadmap for Sugarcane Improvement

Page 38: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

How far can we go?

Waclawovsky, A. J., Sato, P. M., Lembke, G. M., Moore, P. H. and Souza, G. M. Sugarcane for Bioenergy Production: an assessment of yield and regulation of sucrose content (Plant Biotech. J. 2010)

High yield variety: 260 ton/ha in 13 months (commercial at Agrovale, Bahia) and 299 ton/ha (experimental at Fazenda Busato, Bahia)

Page 39: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Waclawovsky, A. J., Sato, P. M., Lembke, G. M., Moore, P. H. and Souza, G. M. Sugarcane for Bioenergy Production: an assessment of yield and regulation of sucrose content (Plant Biotech. J. 2010)

Potential yield of sugarcane

Teoretical potential of sugarcane crop production

Page 40: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Approach

Over 50 cultivars and ancestor genotypes are being evaluated at the sequencing, expression and physiological level

SP80-3280 as a reference cultivar

Contrast:High vs LowPrecocious vs LateTolerant vs Susceptible

RB867515

S. officinarumS. robustum

S. sinensisS. spontaneum

Page 41: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Genetical Genomics of Traits of interest

Progeny 1

Genotypes Brix

Sucrose

% m/m

Glucose

% m/m

Fructose

% m/m

Progeny 2

Genotypes Brix

CTC98-241 18.00 7.311 1.322 0.988 C158 18.3

CTC98-242 18.60 9.183 1.430 1.014 C121 18.8

CTC98-243 19.20 10.956 0.649 0.602 C171 16.8

CTC98-244 14.60 11.161 0.633 0.646 C496 17

CTC98-246 18.80 10.974 0.709 0.545 C11 19.2

CTC98-252 18.00 6.370 0.840 0.579 C6 18.2

CTC98-253 19.60 11.120 0.660 0.643 C113 21

CTC98-258 18.00 6.739 1.116 0.865

CTC98-261 7.00 1.14 0.878 0.755 C436 13.9

CTC98-262 7.40 1.37 0.968 0.823 C292 15

CTC98-265 6.40 0.49 1.200 1.090 C231 13.9

CTC98-268 4.80 0.70 0.342 0.326 C38 12.9

CTC98-271 6.00 0.92 1.098 0.992 C250 11.5

CTC98-272 6.80 1.07 0.725 0.632 C405 15.2

CTC98-277 7.40 1.58 0.774 0.716 C144 13.2

CTC98-279 7.80 1.74 1.318 1.066

Page 42: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

SnRK1

Phosphorylates sucrose phosphate synthase (SPS) and nitrate reductase (NR), which together with binding of 14-3-3 proteins inhibits their activity

category sub category 1 sub category 2 HB vs LB MIn vs IIn Drought ABA Sucrose Glucose

adapter 14-3-3 protein GF14 1 3adapter 14-3-3 protein GF14 4adapter 14-3-3 protein GF14 2adapter 14-3-3 protein GF14 1protein kinase SNF-like kinase caneSnRK1-2 1 2 3

A B

C D

R

R

fStorage parenchyma (R), Phloem (f), Fiber and bundle parenchymal cells (arrows), Bundle distal

cells (ce), Bundle proximal cells (ci)

Page 43: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

SNF-like Protein kinases

Boudsocq & Lauriere (2005)Plant Physiol. 138,1185-1194

Rocha et al. (2007). BMC Genomics 8, 71

Page 44: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Physiology of sucrose and biomass accumulation

Waclawovsky, A. J., Sato, P. M., Lembke, C. G., Moore, P. H and Souza, G. M.Sugarcane for Bioenergy Production: an assessment of yield and regulation of sucrose content. Plant Biotechnology Journal (2010)

Page 45: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Regulation of sucrose accumulation and biomass

Hemicellulose and pectin synthesis

Cellulose synthesis

Sucrose synthesis

Sucrose synthesis

Drought responses

Drought responses

Waclawovsky, A. J., Sato, P. M., Lembke, C. G., Moore, P. H and Souza, G. M. Sugarcane for Bioenergy Production: an assessment of yield and regulation of sucrose content. Plant Biotechnology Journal (accepted)

Page 46: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

BIOEN - HC 03-2010 GSB Project 46

Sugarcane crop production

• Southeastern BR: > 1100 mm rain– Rainfed– “Salvage” irrigation to ensure

germination in dry periods– Irrigation is option for higher

yields

• Northeastern BR: irregular ou insufficient rain– Part of the area is irrigated

GSB Project

Page 47: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

BIOEN - HC 03-2010 GSB Project 47

• In most regions irrigation is not necessary

(except salvage irrigation in some areas)

• Breeding programs: search for drought tolerant varieties: dry winter and soils with low water holding capacity

• Industry: Legislation restricts water use in new projects to maximum 1 m3/t cane.

– Great water use efficient improvements in the last 20 years (5.6 to 1.8 m3/t cane)

– Model mill: 0.46 m3/t

• More strict laws for surface water protection

Water use in sugarcane in Brazil

Page 48: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Sensors (30, 60, 90 cm)

Irrigation

Drought Field Experiments with 10 genotypes: Goianésia, Goiás (CW)

10 genotypes (pre-selected based on performance over 2009 from a group of 100 clones)

IAC

Page 49: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Drought Field Experiments with 6 cultivars: São Paulo, Pernambuco, Alagoas (SE, NE)

irrigated Non-irrigated USP, UNICAMP, UFV, UFAL, UFPE, UFRPE

Page 50: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Plant Information

Variety, Location, Sample, Replicate

Sugarcane Physiology and Technological Data

Measures

IRGA, LAI, SPAD,Fluorometer, Brix, etc

Treatment

Condition, Field/Vase, Date/Time

Statistical MeasuresMicroarray Expression

Phenotype Explanation/Interested Genes

Statistical Analysis

Pathways/Annotation

Page 51: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Sugarcane Transgenics

Explants: Immature Leaves

CEBTEC and IQ - USP

Callus Induction

Regeneration Selective Medium

Greenhouse

PCR and qPCRRooting Shoot Growth

Production of transgenic sugarcane plants

0

0,02

0,04

0,06

0,08

0,1

0,12

4A

-07

4A

-18

4B

-09

5A

-07

5A

-02

6A

C-3

A

6A

C-3

B

6A

C-0

6

10

-03

11

-10

11

-29

11

-34

11

-40

11

-41

12

-01

12

-20

12

-21

18

A-0

4

19

B-0

7

19

B-0

8

20

B-0

3

Nív

el d

e e

xp

res

opKannVazio

pKannPP2c

A (Photosynthetic rate)

0.00

5.00

10.00

15.00

20.00

25.00

30.00

irrigated drought rew atering

µm

ol m

-2 s

-1

6AC-3

5A-07

4B-09

18A04

18A-01

11-34

11-29

silenced

control

Page 52: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Sugarcane transgenic plants with increased sucrose content:3 CIPKs gene silencing using RNAi

Papini-Terzi, F. S., Rocha, F. R., Vêncio, R. Z. N., Felix, J. M., Branco, D., Waclawovsky, A. J., Del-Bem, L. E. V., Lembke, C. G., Costa, M. D-B. L., Nishiyama-Jr, M. Y., Vicentini, R., Vincentz, M., Ulian, E. C., Menossi, M., Souza, G. M. (2009). Genes associated with sucrose content. BMC Genomics 10, 120. doi:10.1186/1471-2164-10-120

Genes associated to sucrose content, sugarcane with increased sucrose levels USPTO Patent US 11/716,262. PCT/BR2007/000282. Gláucia Mendes Souza, Flávia Stal Papini-Terzi, Flávia Riso Rocha, Alessandro Jaquiel Waclawovsky, Ricardo Zorzetto Nicollielo Vêncio, Josélia Oliveira Marques, Juliana de Maria Felix, Marcelo Menossi Teixeira, Marcos Buckeridge, Amanda Pereira de Souza, Eugênio César Ulian.Universidade de São Paulo, Unicamp, Centralcool, CTC and FAPESP

Page 53: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Gene Expression

Physiology

Sequencing

Gene Categorization Functional Annotation

TFs

Kinases

Cell Wall

Phosphatases

cDNA Chip

qRT-PCR miRNA

oligo Chip

Gene Ontology

Pathways

GRASSIUS

Molecular Markers

KEGG

Genome

PromotersSUCEST

Functional Genomics

The SUCEST-FUN DB is based on five main topics: Gene Annotation, Gene Expression, Public Resources, Sequencing Projects and Functional Genomics.

Transgenic Plant

SUCEST-FUN DB (http://sucest-fun.org)

Page 54: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

http://sucest-fun.org

Page 55: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Lignin Biosynthesis is associated to sucrose content

Genes associated to sucrose content, sugarcane with increased sucrose levels USPTO Patent US 11/716,262. PCT/BR2007/000282. Gláucia Mendes Souza, Flávia Stal Papini-Terzi, Flávia Riso Rocha, Alessandro Jaquiel Waclawovsky, Ricardo Zorzetto Nicollielo Vêncio, Josélia Oliveira Marques, Juliana de Maria Felix, Marcelo Menossi Teixeira, Marcos Buckeridge, Amanda Pereira de Souza, Eugênio César Ulian.Universidade de São Paulo, Unicamp, Centralcool, CTC and FAPESP

Page 56: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

PROCESSING DIVISION

Engineering, processing and equipment design aspects of bioethanol productionCellulosic Ethanol

Increasing productivity (amount of ethanol by sugarcane ton), energy saving, water saving and minimizing environmental impacts

• Identify and improve bottlenecks in ethanol production chain at the mill (reception, juice extraction, hydrolysis process, among others)• Improve fermentation process yield• Optimization of water recycling and energy efficiency• Improve separation processes especially to dehydrated ethanol• Develop cellulosic ethanol technology focusing the following objectives:

Characterization and development of physical-chemical pretreatment of bagasse for ligninocellulose hydrolysisDevelopment of acid catalyzed and biocatalyzed saccharification Development of high performance cellulases and hydrolases Reduction of the impact of fermentation inhibitorsDevelopment of microorganism strains capable to efficient fermentation of pentoses and hexosesByproducts recovery

Page 57: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Energetic Potential of Sugarcane

Page 58: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Co-regeneration

Co-generation in 2009/10 = 1.800 MW (3% of electricity matrix)In 2020 = 14.000 MW (14% equals 1 Itaipu) Investments of R$ 45 billion until 2015 on Co-generation (boilers from 21 bar to 92 bar)Eolic = 602 MW (2009)UN approved 140 new Clean Energy Generation Projects for Carbon CreditsWater usage decreased from 5 to 1 million m3/processed ton

Page 59: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

RB92579

RB98710RB855113

RB863129RB931003

SP79-1011

RB93509

RB961552

RB9629

VAT90-212RB72454

RB951541

RB931566RB867515

15,0 15,5 16,0 16,5 17,0 17,5 18,0 18,5 19,0 19,5 20,0 20,5

BRIX

200

220

240

260

280

300

320TC

H

65 60 55 50 45 40 35 30

Fazenda Busato – Bom Jesus da Lapa - BA

Page 60: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

BIOREFINERIES DIVISION

Industrial units near sugar and alcohol industrial facilities that take advantage of renewable raw materials available (ethanol, sugar, CO2, bagasse, trash, yeasts) to produce high added value products

Sugarchemistry for intermediate chemical productionAlcoholchemistry as a petrochemistry substitute

SYNTHETIC BIOLOGY

Complete substitution of fossil fuel derived compounds

• Consorted bioethanol-biodiesel-biokerosene production • Develop products from ethanol via acetaldehyde and ethylene route • Perform Chemical synthesis of intermediate oxygenated chemicals (alcohols, acid ketones), polymers (PHA, lactic acid), nutraceuticals directly from sucrose• Develop biocatalysis for transformations of carbohydrates in valuable chemicals• Bio-based chemicals using a synthetic biology approach

Industrial microbiology Bioprospection and directed evolution of microorganisms

Automation, robotics for screening and selection of organisms Metabolic engineering Design of proteins and enzymesDNA synthesis, expression systems Systems biologySynthetic chemistry Consolidated bioprocessing

Page 61: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Third Generation Bioethanol is produced from algal/glycerin/bagasse biomass either from catalytical or biological fermentation of syngas.

A branch of Third Generation Bioethanol has a major appeal of consuming carbon dioxide produced in the First and Second Generation processes :

great impact of almost zero CO2 emission within the

whole integrated process.

Project GoalsZero Carbon Emission Biorefinery Concept

Rubens Maciel (Unicamp)

Page 62: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Project GoalsZero Carbon Emission Biorefinery Concept

Rubens Maciel (Unicamp)

Page 63: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Project GoalsZero Carbon Emission Biorefinery Concept

Rubens Maciel (Unicamp)

From microorganism model to large scale plant operation, with proposition of integrated alternative routes and alternative processes of production, fermentation and bioethanol separation high efficient plants.

Page 64: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Sugar

Glycose

Sacarose

FE

RM

EN

TA

TIO

N

Ethanol

Acetic acid

Lactic Acid

butanol Acetone ethanol

CH

EM

ICA

L S

YN

TH

ES

IS

Acetaldhyde

Anhydride acetic

Ethyl Acetate

Vinyl Acetate

Crotonaldhyde

Paraldhyde

Butanol

Buthyl Acetate

Piridine

Nicotinamide

Glycol

Butadiene

Glyoxalate

Succinic acid

Biorefinery Concept: Some Chemical Products via fermentation

Learning curve already competitive

Page 65: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Etilene

Ethanol

Acetaldehyde

Acetic acid

Propene

Propylene

___Acrylic Acid

Glycerol

Lactic acid

Butadiene

Butanodiol

Succinic acid

BIOMASSH

YD

RO

LY

SIS

Sugar

Glycose

Sacarose

Xylose

Arabynose

FE

RM

EN

TA

TIO

N

Other Products to be obtained from biomass

Learning curve costs have to be reduced

Page 66: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Sugarcane sucrose

Microorganism Selection

(bioprospection and

collection analysis)

Culture Medium Optimization

Mathematic modeling and

metabolic route selection

(structured model)

Fermentation

Lactic Acid L- and D-Separation/Purification

ProductionKi

netics

ProcessesDehydration reductionAcrylic Acid Propionic

Acid

Process

OptimizationKinetics Modeling Process Control

New Products: Green Acrylic Acid

AÇÚCAR

metionina Acetil-CoA

Piruvato

DMSP

glicerol

Lactato

metilcitrato

propanoil-CoA

Ácido Acrílico

Acrilil-CoA

lactoil-CoA

3-HP-CoA 3-HP 3-hidroxipropanol

-alanina

propanoato

malonil-CoA

aspartato

oxaloacetato

-alanina

metilmal-CoA

-alanina-CoA

mal.semiald

Page 67: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

ENGINES DIVISION

Research to consolidate ethanol as the renewable substitute for gasoline on a short to medium term (10 to 20 years), with the evolution of internal combustion engines, and on a long term with fuel cells.

Flex-fuel engines with increased performance, durability, less fuel consumption and less pollutant emissions

Adjust the engine compression ratioSolve the cold-starting problem when using only ethanolUnderstand the role of ethanol in new engine configurations (direct fuel injection together with port injection and turbo-chargers to decrease fuel consumption and CO2 emission) Study compatibility with after-treatment devices used for emissions controlDevelop ethanol or sugarcane products with physical-chemical properties adequate for compression ignition engines

Page 68: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

IMPACTS DIVISION

Ethanol as a global strategic fuel

Studies to consolidate sugarcane ethanol as the leading technology path to ethanol and derivatives production

Monitoring biofuels expansion, new technologies and its impacts on sustainability (economic, social and environmental)

Providing/generating data and tools for establishing measurable indicators of sustainability of bioenergy Developing methodologies/models to integrate areas related to sustainability from a global perspective

Land use changesGHG emissions

Biomass and soil carbon stocksWater use

BiodiversityRegional income generationJob creation and migration

Integrating tools

Page 69: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Where can we plant sugarcane?

Amazon Rainforest

Pantanal

Atlantic Forest

Other important preservation areas

Above 12% slope area

High

Average

Low (World average)

Inapropriate

69

Source: Leite et al. 2009

POTENTIAL FOR SUGAR CANE PRODUCTION: SOIL AND CLIMATE - WITHOUT IRRIGATION

Page 70: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

615 GL of Ethanol will substitute for 30% of the world’s gasoline

2004 2025

Gasoline consumption 1,200 GL 1,700 GL

Ethanol consumption 30 GL

Ethanol substituting 30% gasoline 615 GL

70

Área disponível no Brasil: 60 Mha (Zoneamento para Cana, Set 2009, aptidão

Alta e Média)

@ 10 kL/Ha (usando somente sacarose da cana) 600 GL por ano

@ 20kL/Ha (usando sacarose e celulose) 1.200 GL/ano

10052010;bioenergy-in-brazil-20100510.pptx;CHBritoCruz & BIOEN

Page 71: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Expansion of sugarcane to new land areas

Southwest: dry winter

Marginal land, pastureland, and poor soils

Research:

• Drought resistance

• Crop breeding to new environments

• Soil/chemical management for deep

rooting (addition of calcium)

• Chemical/fertilizer supply to compensate

for deficiencies in new land areas

• Revise nutritional needs: (inorganic

nutrients are 5% of plant dry matter)

• Optimize the use of fertilizers and

chemicals (Sugarcane: 13% of fertilizer

used in Brazil)

• Recycle nutrients of crop and industry

residues

Page 72: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Agro-environmental Protocol for burning phasing-out

BIOEN - HC 03-2010 GSB Project 72

UNICA, 2010

Page 73: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Manual harvestingNumber of workers to cut cane manually:

1.000.000.000 t (projection)6 t cane / man.day180 days / seasonapproximately 1000 t cane / man.seasonMeans 1.000.000 men cutting cane

Cane needs to be burned - EnvironmentalLower yields, higher costsor mechanization with less, but better jobs?

Social challenges: labour

Manual harvesting482 total men

US$ 6,56 / t

Mechanical harvest66 total men

US$ 4,08 / t

Page 74: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Burned X Green Cane

Burning phasing out in 2014/2017 in São Paulo

Green cane:Thick mulch of plant residues (8-14 t/ha DM)better soil protection and nutrient cycling (C, N)

Challenges: Problems with some insectsDifficult to incorporate fertilizers (lower efficiency, nutrient losses)Some varieties have reduced sprouting

Research needs: Assess environmental gains due to cycling, soil protection, C accumulation in soilCreate varieties adapted to green caneAdequate management practices to green cane

Pests and Diseasesmay compromise cane production

Disease resistant varietiesBiological Control (viable for several pests in sugarcane)Chemical control and crop management: combination of best management practices to minimize use of pesticides

Page 75: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

BIOEN - HC 03-2010 GSB Project 75

• Unburned sugarcane (green cane)– +50% of sugarcane area (and

increasing)

– Deposition of large amounts of plant material on soil surface (8 to 16 t/ha DM)

– Large root system

– Soil and water conservation

– Potential to increase soil C

Sugarcane: Soil C

Depends on the referenceForest into sugarcane: loss of soil CDegraded pasture, row crops into sugarcane: soil accumulates C

Page 76: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

gCO2eq/Mj

RFS a: Preliminary rule; b: final rule, no trash for energy and marginal electricity credit; c: final rule, trash for energy and marginal electricity credit (substitute thermal plant); LCFS a: no electricity credit; b: average electricity credit and mechanically harvested. Source: EPA; CARB; European Commission; Macedo (2009) all trash, marginal electricity credit and improved co-generation. RED: still deciding on ILUC, less credit for co-generation, sustability criteria under discussion

Sugarcane Ethanol GHG Emissions

Page 77: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Trash: preserve soil or use for co-generation and 2nd. generation ethanol?

ARA 003, 2007(Penatti, 2004)

Probably not

Research data in Brazil (CTC) shows that leaving 40% of trash is enough

Amounts may vary with soil type and region/climate

More research needed

Constant addition of OM needed to maintain soil chemical and biological quality

Is all the trash necessary to maintain soil fertility?

Page 78: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),
Page 79: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Land

Sugarcane

Pasture

Crop rotation with fallow lands

(Soybean, corn, peanuts, etc.)

Distillery(Sugar, Alcohol, Energy,

Livestock Feed)

Feedlot

Cattle

Biodigester

Lot sales

Manure

Biogas

Fertilizer

Feed

Source: NIPE-CGEE (2009)LuísCortez-June14,2010

Bioethanol and Livestock Integration

Page 80: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Recycling of residues

Improve recycling of residues (vinasse, filter cake, ashes, plant residues etc)

Page 81: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

BIOEN - HC 03-2010 GSB Project 81

Filter cake and vinasse are regularly applied to the field

Page 82: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

FAPESP BIOENERGY PROGRAM BIOEN

http://bioenfapesp.org

Program CoordinatorGlaucia Mendes SouzaDepartamento de BioquímicaInstituto de QuímicaUniversidade de São Paulo

CommitteeMarie-Anne VanSluysInstituto de Biociências - Universidade de São Paulo

Rubens MacielFaculdade de Engenharia QuímicaUniversidade Estadual de Campinas

Heitor CantarellaInstituto AgronômicoSecretaria de Agricultura e Abastecimento do Estado de São Paulo

Andre Nassar ICONE

Page 83: FAPESP BIOENERGY PROGRAM BIOEN · Enable a Systems Biology approach for Biofuel Crops PROCESSING AND ETHANOL TECHNOLOGIES Increasing productivity (amount of ethanol by sugarcane ton),

Biomass Feedstock DevelopmentEthanol and Biofuel Technologies

Ethanolchemistry and BiorefineriesConversion technologies: Engines, Turbines, Fuel Cells

Sustainability and ImpactsBioenergy Market: Clean Tech Opportunities

Renewable Energy Policy

http://bbest.org.br