1
hIgG Titer (g/L) 0 1 2 3 4 ExpiFectamine CHO (with Enhancer and Feed) PEI (no Enhancer or Feed) 30fold TIter (mg/L) Roland Leathers, Chao Yan Liu, Virginia Spencer, Shyam Kumar, Jian Liu, Ping Liu, Henry Chiou * , Jonathan F. Zmuda Thermo Fisher Scientific, 7335ExecutiveWay, Frederick MD, * 5791 Van Allen Way, Carlsbad, CA. Figure 3. Characterization ofExpiCHOS Cells (A) ExpiCHOS cells. (B) Stability of protein exp ression ov er 18 pass ages. (C ) Growth c urve fo r ExpiCHOS cells grown in standard shake flask culture. ABSTRACT & INTRODUCTION C HO c ell s are the predominanthostfor biotherapeutic protein expressi on,with roughl y 70% of licensed bi ologi cs manufac tured i n CHO. Multi ple attri butes make CHO cell s desirable for bioproduction incl uding the ability to adapt to highdensit y s us pens ion culture in serumfree and chemicallydefined media and the incorporation of post translational modifications that are biol ogi call y ac ti ve in humans. For these reas ons, the ability to produce transi entCHOderi ved proteins earl y on during drug devel opment is highl y adv antageous to minimize, as muc h as pos s i ble, changes in protei n qualit y /func ti on observedwhen movi ng fromR&D to bioproduction. Unfortunatel y , C HO cell s express lower level s ofprotein than HEK293 cell s in exi sting transi ent sy s tems , in some instances 50100 times less than the best293based systems,and onl y modest titer improvements are obtained through the optimi zation of indi vidual component s of exi s ting trans ient C HO work flows . To address the s i gnifi cant unmet need for higher trans ient C HO protein titers , s ys tems bas ed approac hes w ere employ ed whereby the latest advances in cell cult ure media, feeds, transfection reagents and expression enhancers were optimized in conjunction with a new highexpressing CHOcell clone to generate a si mple and robust workflow for transient protein expression i n CHO cell s capabl e ofgenerating gram per liter protein titers in 1014 days. These advances will allow for unprecedent ed access to CHOderived proteins early on during candidate selection and may serve to revolutionize the use of CHO cells for transient protei n expressionduring thedrugdevelopmentprocess. CONCLUSIONS We descri be a s ys tems bas ed approac h for enhanc ing l evels of transi ent protein production i n CHO cells t hat all ows for the produc tion of rec ombi nant proteins at l evels exc eeding thos e of the Expi293 sys tem while mai ntaini ng acti vity,purityand gl yc osy lation patterns comparabl e to thos e obs erved i n s tably trans fec ted C HOS c ell s. This performance enhancement w as made pos s i ble through the incorporation ofmultiple novel reagents including: (1) a hi ghex pres s i ng CHO cell cl one,(2) a CD/AOF culture media that allows for hi gh dens ity CH O grow th and trans fec tion, (3) an optimi zed CHO cell trans fec ti on reagent, (4) a novel CHO feed optimi z ed for trans i ent trans fec tion c ult ure conditions, (5)a posttransfection enhancer solution and (6) a simple to perform workflow. ACKNOWLEDGEMENTS We woul d like to thank Mi chael Gillmeister for performing the glycan analysi s on the human IgG samples and Brian Paszkiet for assisti ng with the transfection effici enc y studies. ExpiCHO™: Surpassing the Performance of 293 in a Transient CHO Expression System Thermo Fisher Scientific • 5791 Van Allen Way • Carlsbad,CA 92008 • lifetechnologies.com Figure 5. Characteristics ofExpiFectamineCHO Transfection Reagent (Top panel) Ti me c ourse of GFP expr ession in ExpiCHOS c ells. Insets show flow cytom etry data fo r corresp onding cultu res. (A ) When used in conjunc tion with ExpiCHO Feed and E nhancer , ExpiFectamineCHO g ener ates gre ater th an 30f old highe r titers tha n PEI alone. (B) Despite the hig h density of cells at the time of t ransfecti on, plasmid DNA levels as low as 0.43 µg/ mL of final cultur e volume gene rate maxim al p rotein titers , co rresp onding to less than half of the indust ry sta ndar d o f 1. 0 µg/mL plasmid DNA. Figure 6. Identification of OptimalPostTransfection Enhancers (A) Combinatio ns of differe nt expr ession enh ancers we re tested by multifact orial DOE for effects o n protein titers. Data f rom a sub set o f enh ancer combi nations are s hown, in dicating t he im pact of vario us enhance r for mulations o n pro tein titers . (B ) P rotein tit ers ar e reduc ed by 50% or more wit hout th e addition of the E xpiFectamineCHO E nhancer reagent. II. ExpiCHO Expression Medium and ExpiCHO Feed III. ExpiFectamineCHO Transfection Reagent VI. Kinetics of Protein Production Figure 7. Transient Transfection Protocol – 7 or 8Stepsto Protein Production Figure 1. SystemsBased Approach toIncreasedTransientProtein Expression I. Generation of HighExpressing ExpiCHOS Cells Transfection of CHO cells with Protein X Selection of high expressing clones by Clone Pix Clone expansion into 6 well dishes Screen clones for Protein Y expression Clone expansion into 30 mL shake flasks Screen clones for Protein Z expression Master Cell Bank Generation Figure 11. Glycosylation Patterns in CHO (Transient and Stable)and HEK293 Human IgG sup erna tant sam ples were collect ed and p urified usin g POROS® MabCaptu re® A resin . Following PNGase digestio n and A P TS labeling, glyca n profiles we re analyz ed on an Applie d B iosystems® 3500 S eries Genetic A nalyzer by capillary electrophoresis. Figure 4. Optimization of ExpiCHO Feed Addition (A) Fo r the Max Titer Protocol, additio n of s econd feed can be a dded on Day 4, 5, or 6 pos ttr ansfectio n with similar perfo rma nce. (B) Two equal volume fee ds on Days 1 and 5 p osttr ansfectio n do uble protei n titers. Figure 2. Workflow for Identifying HighExpressing CHOClones (A ) CHO cells were transiently tr ansfecte d and evalu ated fo r prot ein expressi on using th e ClonePix system ( Molecula r Devices ). (B) Selec ted cl ones w ere furt her evaluat ed via tr ansfectio n with plasmids for multiple protei ns. Control h uman IgG titers using an existi ng CHO clone a re shown as well as Control titers for the preclonal pool. B Figure 8. Kinetics of hIgG Expression (Green line ) Standar d Protocol consisting of on e feed and n o tempe ratu re shift. (Blue line) High Tite r Protocol co nsisting of one fee d a nd temp eratu re shift to 32°C. (R ed lin e) hIgG kinetics using the M ax Titer P rotocol consisting of two feeds and temperature shift to 32°C. A Media Cells Optimized Transient Expression V. Workflow IV. ExpiFectamineCHO Enhancer VII. Expression Levels of Various Transient Systems VIII. Glycan Analysis Days in Culture VCD (x 10 6 cells/mL) (solid line) % Viability (dotted line) 0 1 2 3 4 5 6 7 8 0 5 10 15 20 25 0 50 100 ExpiCHO Expression Media Attributes One media for growth and transfection Formulated specifically for transient transfection Chemicallydefine d (CD) A nimal originfree (A OF S erumfree P roteinfree Manufactured under cGMP S upports highdensity cell growth Matched to a specific feed Free from regulatory/im po rt/e xp ort limitations ExpiCHOSCellLine Attributes Derived from GMP CHOS cells A dapted for highdensity culture Nonclumpy, singlecell phenotype S hort doubling time (~17 hours) S table growth and expression over 20+ passages Figure 10. Titers in FreeStyleCHO,Expi293 and ExpiCHO E xpression levels of hu man I gG, Rabbit IgG a nd E ryth ropoi etin in FreeS tyleCHO, E xpi2 93 an d E xpiCHO transient expr ession syste ms ar e shown . E xpiCHO titers ran ge fr om 2 5x – 1 60x th ose of Fr eeS tyleCHO and 2x – 4x those obtained using the Expi293 system. hIgG Titer (mg/L) One Feed Two Feeds Day 3 Day 5 Day 7 B A C A B A B hIgG (mg/L) ExpiFectamine Enhancer 0 1000 2000 3000 4000 + Figure 9. Scalability of the ExpiCHO System 160x 3x 95x 4x 25x 2x 0.14 0.28 0.43 0.57 0.71 0.86 0 1 2 3 Titer (g/L) DNA Concentration (μg/mL) Expi293 ExpiCHO Stable CHOS 0% 10% 20% 30% 40% 50% 60% 70% 80% 90% G0 A1 G2F Man5A1F G1F_2 G1F_1 G0F D4 D5 D6 D7 0 1 2 Titer (g/L) Timing of Second Feed 125mL 250mL 500mL 1L 2L 3L 0 1000 2000 3000 4000 Titer (hIgG) mg/L 125rpm 70rpm 25m L 50m L 100m L 200m L 400m L 750m L Flask Size Transfection Volume Shake Speed 32°C E nhancer 2 feeds 32°C E nhancer 1 feed 37°C E nhancer 1 feed Days of Culture Titer (g/L) 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 0 1 2 3 Max Titer Protocol High Titer Protocol Standard Protocol Expi293 ExpiCHO

ExpiCHO™:’’Surpassing’the’Performance’ of’’’’’’ 293in ... ·  · 2015-09-07transient CHOprotein titers, ... ’’Surpassing’the’Performance’ of’’’’’’

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Page 1: ExpiCHO™:’’Surpassing’the’Performance’ of’’’’’’ 293in ... ·  · 2015-09-07transient CHOprotein titers, ... ’’Surpassing’the’Performance’ of’’’’’’

hIgG  Titer  (g/L)

0

1

2

3

4

ExpiFectamine  CHO(with  Enhancer  and  Feed)

PEI(no  Enhancer  or  Feed)

30-­fold

TIter  (m

g/L)

Day  3

Day  5

Day  7

Roland  Leathers,  Chao  Yan  Liu,  Virginia  Spencer,  Shyam Kumar,  Jian  Liu,  Ping  Liu,  Henry  Chiou*,  Jonathan  F.  ZmudaThermo  Fisher  Scientific,  7335  Executive  Way,  Frederick  MD,  *5791  Van  Allen  Way,  Carlsbad,  CA.

Figure 3. Characterization ofExpiCHO-­SCells(A) ExpiCHO-­S cells. (B) Stability of protein exp ression ov er 18 pass ages. (C ) Growth c urve fo rExpiCHO-­S cells grown in standard shake flask culture.

ABSTRACT & INTRODUCTIONCHO cells are the predominanthost for biotherapeutic protein expression,with roughly70% of licensed biologics manufactured in CHO. Multiple attributes make CHO cellsdesirable for bioproduction including the ability to adapt to high-­density suspensionculture in serum-­free and chemically-­defined media and the incorporation of post-­translational modifications thatare biologically-­active in humans. For these reasons,the ability to produce transientCHO-­derived proteins early on during drug developmentis highly advantageous to minimize, as much as possible, changes in proteinquality/function observedwhen moving fromR&D to bioproduction. Unfortunately,CHOcells express lower levels ofprotein than HEK293 cells in existing transientsystems, insome instances 50-­100 times less than the best293-­based systems,and only modesttiter improvements are obtained through the optimization of indiv idual components ofexisting transientCHO workflows. To address the significant unmet need for highertransientCHO protein titers,systems-­based approaches were employed whereby thelatest advances in cell culture media, feeds, transfection reagents and expressionenhancers were optimized in conjunction with a new high-­expressing CHOcell c lone togenerate a simple and robust workflow for transient protein expression in CHO cellscapable ofgenerating gramper liter protein titers in 10-­14 days. These advances willallow for unprecedented access to CHO-­derived proteins early on during candidateselection and may serve to revolutionize the use of CHO cells for transient proteinexpressionduring thedrugdevelopmentprocess.

CONCLUSIONSWe describe a systems-­based approach for enhancing levels of transient proteinproduction in CHO cells that allows for the production of recombinant proteins at levelsexceeding those of the Expi293 systemwhile maintaining activ ity,purityand glycosylationpatterns comparable to those observed in stably transfected CHO-­S cells. Thisperformance enhancementwas made possible through the incorporation ofmultiple novelreagents including: (1) a high-­expressing CHO cell c lone, (2) a CD/AOF culture mediathat allows for high density CHO growth and transfection, (3) an optimized CHO celltransfection reagent, (4) a novel CHO feed optimized for transient transfection cultureconditions, (5)a post-­transfection enhancer solution and (6) a simple to performworkflow.

ACKNOWLEDGEMENTSWe would like to thank Michael Gillmeister for performing the glycan analysis on thehuman IgG samples and Brian Paszkiet for assisting with the transfection effic iencystudies.

ExpiCHO™:    Surpassing   the  Performance   of            293  in  a  Transient   CHO  Expression   System

Thermo  Fisher  Scientific   •  5791  Van  Allen  Way  •  Carlsbad,  CA  92008  •  lifetechnologies.com

Figure 5. Characteristics ofExpiFectamineCHO TransfectionReagent(Top panel) Ti me c ourse of GFP expr ession in ExpiCHO-­S c ells. Insets show flow cytometry data fo rcorresp onding cultu res. (A) When used in conjunc tion with ExpiCHO Feed and Enhancer ,ExpiFectamineCHO g ener ates gre ater th an 30-­f old highe r titers tha n PEI alone. (B) Despite the hig hdensity of cells at the time of t ransfecti on, plasmid DNA levels as low as 0.43 µg/ mL of final cultur evolume gene rate maximal p rotein titers , co rresp onding to less than half of the indust ry sta ndar d o f 1. 0µg/mL plasmid DNA.

Figure 6. Identification of OptimalPost-­Transfection Enhancers(A) Combinatio ns of differe nt expr ession enh ancers we re tested by multi-­fact orial DOE for effects o nprotein titers. Data f rom a sub -­set o f enh ancer combi nations are s hown, in dicating t he impact of vario usenhance r formulations o n pro tein titers . (B) Protein tit ers ar e reduc ed by 50% or more wit hout th eaddition of the ExpiFectamineCHO Enhancer reagent.

II.    ExpiCHO  Expression  Medium  and  ExpiCHO  Feed

III.    ExpiFectamineCHO   Transfection  Reagent

VI.    Kinetics  of  Protein  Production

Figure 7.Transient Transfection Protocol– 7 or 8Stepsto Protein Production

Figure 1. Systems-­BasedApproach toIncreasedTransientProtein Expression

I.    Generation  of    High-­Expressing  ExpiCHO-­S  CellsTransfection  of  CHO  cells  with  

Protein  X

Selection  of  high  expressing  clones  by  

Clone  Pix

Clone  expansion  into  6  well  dishes

Screen  clones  for  Protein  Y  expression  

Clone  expansion  into  30  mL  shake  

flasks

Screen  clones  for  Protein    Z  expression

Master  Cell  Bank  Generation

Figure 11. Glycosylation Patterns in CHO (Transient and Stable)andHEK293Human IgG sup erna tant samples were collect ed and p urified usin g POROS® MabCaptu re® A resin .Following PNGase digestio n and APTS labeling, glyca n profiles we re analyz ed on an Applie dBiosystems® 3500 Series Genetic Analyzer by capillary electrophoresis.

Figure 4. Optimization of ExpiCHO FeedAddition(A) Fo r the Max Titer Protocol, additio n of s econd feed can be a dded on Day 4, 5, or 6 pos t-­tr ansfectio nwith similar perfo rma nce. (B) Two equal volume fee ds on Days 1 and 5 p ost-­tr ansfectio n do uble protei ntiters.

Figure 2.Workflow for IdentifyingHigh-­ExpressingCHOClones(A) CHO cells were transiently tr ansfecte d and evalu ated fo r prot ein expressi on using th e ClonePixsystem (Molecula rDevices ). (B) Selec ted cl ones w ere furt her evaluat ed via tr ansfectio n with plasmidsfor multiple protei ns. Control h uman IgG titers using an existi ng CHO clone a re shown as well asControl titers for the pre-­clonal pool.

B

Figure 8. Kinetics of hIgG Expression(Green line ) Standar d Protocol consisting of on e feed and n o tempe ratu re shift. (Blue line) High Tite rProtocol co nsisting of one fee d a nd temp eratu re shift to 32°C. (R ed lin e) hIgG kinetics using the MaxTiter Protocol consisting of two feeds and temperature shift to 32°C.

A

Media

Cells

Optimized  Transient  Expression  

V.    Workflow

IV.    ExpiFectamineCHO   Enhancer

VII.  Expression  Levels  of  Various  Transient  Systems

VIII.    Glycan  Analysis

Days  in  Culture

VCD  (x  106cells/mL)

(solid  line) %

 Viability

(dotted  line)

0 1 2 3 4 5 6 7 80

5

10

15

20

25

0

50

100

ExpiCHO  Expression  Media  Attributes• One   media   for   growth   and   transfection

• Formulated   specifically   for   transient   transfection• Chemically-­define d   (CD)• Animal   origin-­free   (AOF

• Serum-­free• Protein-­free

• Manufactured   under   cGMP• Supports   high-­density   cell   growth• Matched   to   a   specific   feed

• Free   from   regulatory/impo rt/e xp ort   limitations

ExpiCHO-­S  Cell  Line  Attributes• Derived   from   GMP   CHO-­S   cells

• Adapted   for   high-­density   culture• Non-­clumpy,   single-­cell   phenotype• Short   doubling   time   (~17   hours)

• Stable   growth   and   expression   over   20+  passages

Figure 10. Titers in FreeStyleCHO,Expi293 andExpiCHOExpression levels of human I gG, Rabbit IgG a nd Eryth ropoi etin in FreeStyleCHO, Expi2 93 an d ExpiCHOtransient expr ession systems ar e shown . ExpiCHO titers ran ge fr om2 5x – 1 60x th ose of Fr eeStyleCHOand 2x – 4x those obtained using the Expi293 system.

hIgG  Titer  (mg/L)

One  Feed Two  Feeds

TIter  (m

g/L)

Day  3

Day  5

Day  7

B

A

C

A B

A B

hIgG  (m

g/L)

ExpiFectamine  Enhancer

0

1000

2000

3000

4000

+ -­

Figure 9. Scalability of the ExpiCHO System

160x 3x 95x 4x 25x 2x

0.14 0.28 0.43 0.57 0.71 0.860

1

2

3

Titer  (g/L)

DNA  Concentration  (µg/mL)

Expi293 ExpiCHO Stable  CHO-­S0%

10%

20%

30%

40%

50%

60%

70%

80%

90%

G0

A1

G2F

Man5A1F

G1F_2

G1F_1

G0F

D4 D5 D6 D70

1

2

Titer  (g/L)

Timing  of  Second  Feed

125mL 250mL 500mL 1L 2L 3L0

1000

2000

3000

4000

Titer  (hIgG)  m

g/L

125rpm 70rpm

 25mL                      50mL                    100mL                      200mL                  400mL                  750mL

Flask  Size

Transfection  Volume

Shake  Speed

32°CEnhancer2  feeds

32°CEnhancer1  feed

37°CEnhancer1  feed

Days  of  Culture

Titer  (g/L)

0 1 2 3 4 5 6 7 8 9 10 11 12 13 140

1

2

3

Max  Titer  Protocol

High  Titer  ProtocolStandard  Protocol

Expi293

ExpiCHO