1
Ana Trabanino. ENT. [email protected] Andy Michel. ENT. [email protected] Yosra Helmy. FAHRP. [email protected] Gireesh Rajashekara. FAHRP. [email protected] CFAES provides research and related educational programs to clientele on a nondiscriminatory basis. For more information, visit go.osu.edu/cfaesdiversity. INTRODUCTION Fall armyworm, Spodoptera frugiperda (Lepidoptera:Noctuidae), is considered one of the most detrimental pests of agriculture 4 , due to its ability to feed on a broad range of economically important crops and its adaptive potential to several insecticides 2,4 . For the past decades, fall armyworm (FAW) control has heavily relied on transgenic plants expressing Bacillus thuringiensis (Bt) traits 4 . However, there are now existing FAW populations exhibiting resistance to Bt, which threatens food security worldwide 2,3,4,8 . RNA interference (RNAi) is a post-transcriptional, gene silencing mechanism that has shown great potential in insect pest control by targeting biologically important genes that cause insect mortality 13,14 . This technique has been successful in many important insect pests such as mosquitos, aphids, bed bugs and beetles 14 . Yet, current approaches in lepidopteran pests remain ineffective 10,13 . The use of nanoparticles has been an emerging tactic to overcome obstacles in RNAi 15 . The use of nanoparticles can improve RNAi mode of action by increasing the bioavailability of siRNA as well as stabilizing and protecting siRNA from degradation 15 . Therefore, the goal of this study is to determine if RNAi can be achieved in FAW using nanoparticles coupled with siRNA targeting Vacuolar protein sorting associating protein 4 (VPS4) gene, a key regulator for vesicle trafficking7. We hypothesize that gene expression will be significantly lower or knocked-down on FAW larvae treated with nanoparticles coupled and the targeted siRNA ( VPS4 ). METHODS siRNA and nanoparticle preparation siRNA targeting the gene of interest VPS4 “si VPS " (GenBank accession number JN584642.1) and siRNA used as negative control SCRAMBLE ”siSCRAM” (randomized sequence sequence with no matches to the target gene) were designed using ThermoFisher ® BLOCK-iT RNAi and synthesized through Sigma Aldrich ® . Three different type of nanoparticles were prepared by the Rajashekara Laboratory from the Department of Food Animal Health Research Program (CFAES/OSU, Wooster). All nanoparticle were prepared with si VPS and siSCRAM separately following established protocols. Nanoparticles used: perfluorocarbon-based (PFC) 5 , chitosan 6 , and poly-lactic-glycolic acid (PLGA) 1 . Every solution had varying siRNA and nanoparticle concentrations depending on nanoparticle type based on each protocol. Having a total of 6 treatments . Nanoparticle and siRNA delivery Nanoparticle and siRNA solution was delivered to 1st instar FAW larvae using a nebulizer compressor 12 . For every treatment, 30 FAW larvae were aerosolized with the respective treatment (nanoparticle and siRNA) solution for 10 minutes. After aerosolizing, every larva was placed in a labeled individual cup with artificial diet. Gene expression and statistical analyses Following 24 hours after aerosolization, 8 larvae from every treatment were collected for RNA isolation and cDNA synthesis. Gene expression was measured through RT-qPCR. All analyses were performed in R (R Core Team 2019). VPS4 gene expression was normalized using the Delta Ct method 9 . Differences in VPS 4 gene expression in the three different nanoparticle type were evaluated using Welch two sample T-Test. RESULTS CONCLUSIONS Our results suggest that delivering siRNA and nanoparticle complex through aerosol spray to FAW, specifically with PLGA nanoparticle, show potential for RNAi as a pest control strategy in lepidopteran pests. PLGA nanoparticle was the only treatment that showed a significant decrease in gene expression. PFC and Chitosan nanoparticles also showed a slight but not significant decrease, which may be due to differences in nanoparticle and siRNA concentrations. SIGNIFICANCE This study can be used as baseline for RNAi as an alternative, species-specific pest management strategy. This technique can be used as a tactic to mitigate insect resistance and control pests in an environmental conscious, different mode of action than common insecticides. BIBLIOGRAPHY 1.Aldayel, A. M., Naguib, Y. W., O’Mary, H. L., Li, X., Niu, M., Ruwona, T. B., & Cui, Z. (2016). Acid-Sensitive Sheddable PEGylated PLGA Nanoparticles Increase the Delivery of TNF-α siRNA in Chronic Inflammation Sites. Molecular Therapy - Nucleic Acids, 5(July), e340. https://doi.org/10.1038/mtna.2016.39 2.Bernardi, D., Salmeron, E., Horikoshi, R. J., Bernardi, O., Dourado, P. M., Carvalho, R. A., … Omoto, C. (2015). Cross- Resistance between Cry1 Proteins in Fall Armyworm (Spodoptera frugiperda) May Affect the Durability of Current Pyramided Bt Maize Hybrids in Brazil. PLOS ONE, 10(10), e0140130. https://doi.org/10.1371/journal.pone.0140130 3.Carvalho, R. A., Omoto, C., Field, L. M., Williamson, M. S., & Bass, C. (2013). Investigating the Molecular Mechanisms of Organophosphate and Pyrethroid Resistance in the Fall Armyworm Spodoptera frugiperda. PLoS ONE, 8(4). https://doi.org/10.1371/journal.pone.0062268 4.Fatoretto, J. C., Michel, A. P., Silva Filho, M. C., & Silva, N. (2017). Adaptive Potential of Fall Armyworm (Lepidoptera: Noctuidae) Limits Bt Trait Durability in Brazil. Journal of Integrated Pest Management, 8(1), 17. https://doi.org/10.1093/jipm/pmx011 5.Kaneda, M. M., Sasaki, Y., Lanza, G. M., Milbrandt, J., & Wickline, S. A. (2010). Mechanisms of nucleotide trafficking during siRNA delivery to endothelial cells using perfluorocarbon nanoemulsions. Biomaterials, 31(11), 3079–3086. https://doi.org/10.1016/j.biomaterials.2010.01.006 6.Katas, H., & Alpar, H. O. (2006). Development and characterisation of chitosan nanoparticles for siRNA delivery. Journal of Controlled Release, 115(2), 216–225. https://doi.org/10.1016/j.jconrel.2006.07.021 7.Li, Z., & Blissard, G. W. (2012). Cellular VPS4 Is Required for Efficient Entry and Egress of Budded Virions of Autographa californica Multiple Nucleopolyhedrovirus. Journal of Virology, 86(1), 459–472. https://doi.org/10.1128/jvi.06049-11 8.Mamta, B., & Rajam, M. V. (2017). RNAi technology: a new platform for crop pest control. Physiology and Molecular Biology of Plants, 23(3), 487–501. https://doi.org/10.1007/s12298-017-0443-x 9.Schmittgen, T. D., & Livak, K. J. (2008). Analyzing real-time PCR data by the comparative CT method. Nature Protocols, 3(6), 1101–1108. https://doi.org/10.1038/nprot.2008.73 10.Singh, I. K., Singh, S., Mogilicherla, K., Shukla, J. N., & Palli, S. R. (2017). Comparative analysis of double-stranded RNA degradation and processing in insects. Scientific Reports, 7(1), 17059. https://doi.org/10.1038/s41598-017-17134-2 11.Storer, N. P., Babcock, J. M., Schlenz, M., Meade, T., Thompson, G. D., Bing, J. W., & Huckaba, R. M. (2010). Discovery and Characterization of Field Resistance to Bt Maize: <I>Spodoptera frugiperda</I> (Lepidoptera: Noctuidae) in Puerto Rico. Journal of Economic Entomology, 103(4), 1031–1038. https://doi.org/10.1603/EC10040 12.Thairu, M. W., Skidmore, I. H., Bansal, R., Nováková, E., Hansen, T. E., Li-Byarlay, H., … Hansen, A. K. (2017). Efficacy of RNA interference knockdown using aerosolized short interfering RNAs bound to nanoparticles in three diverse aphid species. Insect Molecular Biology, 26(3), 356–368. https://doi.org/10.1111/imb.12301 13.Yoon, J.-S., Gurusamy, D., & Palli, S. R. (2017). Accumulation of dsRNA in endosomes contributes to inefficient RNA interference in the fall armyworm, Spodoptera frugiperda. Insect Biochemistry and Molecular Biology, 90, 53–60. https://doi.org/10.1016/j.ibmb.2017.09.011 14.Zhang, J., Khan, S. A., Heckel, D. G., & Bock, R. (2017). Next-Generation Insect-Resistant Plants: RNAi-Mediated Crop Protection. Trends in Biotechnology, 35(9), 871–882. https://doi.org/10.1016/j.tibtech.2017.04.009 15.Zhou, J., Shum, K. T., Burnett, J. C., & Rossi, J. J. (2013). Nanoparticle-based delivery of RNAi therapeutics: Progress and challenges. Pharmaceuticals, 6(1), 85–107. https://doi.org/10.3390/ph6010085 ACKNOWLEDGEMENTS We thank the Center of Applied Plant Sciences (CAPS) for the funding for this project. Optimizing RNA interference in fall armyworm, Spodoptera frugiperda using improved nanoparticles Ana Trabanino 1 , Yosra A. Helmy 2 , Gireesh Rajashekara 2 & Andy Michel 1 1 The Ohio State University, Department of Entomology 2 The Ohio State University, Food Animal Health Research Program DEPARTMENT OF ENTOMOLOGY Nanoparticles + siRNA FAW larvae Mesh Fig. 2. The technique of “Nanoparticle + siRNA complex” delivery to the FAW larvae with the nebulizer compressor. 0.010 0.014 0.018 0.022 PFCScram PFCVPS siSCRAM siVPS Normalized expression A Treatments 0.007 0.009 0.011 0.013 Chscram CHVPS siSCRAM siVPS Normalized Expression B Treatments Normalized Expression 0.003 0.004 0.005 0.006 PLGAScram siSCRAM siVPS * Treatments C Fig. 3. mRNA expression of VPS gene in FAW larvae aerosolized with A) PFC nanoparticle (P=0.2738), B) Chitosan nanoparticle (P=0.3102) and C) PLGA nanoparticle (P=0.004). All samples were normalized to reference gene RPL11 using Delta Ct method. Samples per treatment=8. Black points represent mRNA normalized expression per larva, red point represents the mean of the mRNA expression in each treatment and red line the standard deviation. NS =not significant. Asterisk represents treatments significantly different. Statistical analysis used Welch two sample t-test. Fig. 1. A) Severe damage of one FAW larva in a corn ear (Picture by John C. French 2019. B) Corn foliage damage caused by FAW (Picture by Plantix 2018). A B

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  • Ana Trabanino. ENT. [email protected]

    Andy Michel. ENT. [email protected]

    Yosra Helmy. FAHRP. [email protected] Rajashekara. FAHRP. [email protected]

    CFAES provides research and related educational programs to clientele on a nondiscriminatory basis. For more information, visit go.osu.edu/cfaesdiversity.

    INTRODUCTION

    Fall armyworm, Spodoptera frugiperda (Lepidoptera:Noctuidae), is considered one of the most detrimental pests of agriculture4, due to its ability to feed on a broad range of economically important crops and its adaptive potential to several insecticides2,4.

    For the past decades, fall armyworm (FAW) control has heavily relied on transgenic plants expressing Bacillus thuringiensis (Bt) traits4. However, there are now existing FAW populations exhibiting resistance to Bt, which threatens food security worldwide2,3,4,8.

    RNA interference (RNAi) is a post-transcriptional, gene silencing mechanism that has shown great potential in insect pest control by targeting biologically important genes that cause insect mortality13,14. This technique has been successful in many important insect pests such as mosquitos, aphids, bed bugs and beetles14. Yet, current approaches in lepidopteran pests remain ineffective10,13.

    The use of nanoparticles has been an emerging tactic to overcome obstacles in RNAi15. The use of nanoparticles can improve RNAi mode of action by increasing the bioavailability of siRNA as well as stabilizing and protecting siRNA from degradation15.

    Therefore, the goal of this study is to determine if RNAi can be achieved in FAW using nanoparticles coupled with siRNA targeting Vacuolar protein sorting associating protein 4 (VPS4) gene, a key regulator for vesicle trafficking7.

    We hypothesize that gene expression will be significantly lower or knocked-down on FAW larvae treated with nanoparticles coupled and the targeted siRNA (VPS4).

    METHODS

    siRNA and nanoparticle preparationsiRNA targeting the gene of interest VPS4 “siVPS" (GenBank accession number JN584642.1) and siRNA used as negative control SCRAMBLE ”siSCRAM” (randomized sequence sequence with no matches to the target gene) were designed using ThermoFisher® BLOCK-iT RNAi and synthesized through Sigma Aldrich®.Three different type of nanoparticles were prepared by the Rajashekara Laboratory from the Department of Food Animal Health Research Program (CFAES/OSU, Wooster). All nanoparticle were prepared with siVPS and siSCRAM separately following established protocols. Nanoparticles used: perfluorocarbon-based (PFC)5, chitosan6, and poly-lactic-glycolic acid (PLGA)1. Every solution had varying siRNA and nanoparticle concentrations depending on nanoparticle type based on each protocol. Having a total of 6 treatments.

    Nanoparticle and siRNA deliveryNanoparticle and siRNA solution was delivered to 1st instar FAW larvae using a nebulizer compressor12.For every treatment, 30 FAW larvae were aerosolized with the respective treatment (nanoparticle and siRNA) solution for 10 minutes. After aerosolizing, every larva was placed in a labeled individual cup with artificial diet.

    Gene expression and statistical analysesFollowing 24 hours after aerosolization, 8 larvae from every treatment were collected for RNA isolation and cDNA synthesis. Gene expression was measured through RT-qPCR.All analyses were performed in R (R Core Team 2019). VPS4 gene expression was normalized using the Delta Ct method9. Differences in VPS4 gene expression in the three different nanoparticle type were evaluated using Welch two sample T-Test.

    RESULTS CONCLUSIONS

    Our results suggest that delivering siRNA and nanoparticle complex through aerosol spray to FAW, specifically with PLGA nanoparticle, show potential for RNAi as a pest control strategy in lepidopteran pests. PLGA nanoparticle was the only treatment that showed a significant decrease in gene expression. PFC and Chitosan nanoparticles also showed a slight but not significant decrease, which may be due to differences in nanoparticle and siRNA concentrations.

    SIGNIFICANCEThis study can be used as baseline for RNAi as an alternative, species-specific pest management strategy. This technique can be used as a tactic to mitigate insect resistance and control pests in an environmental conscious, different mode of action than common insecticides.

    BIBLIOGRAPHY1.Aldayel, A. M., Naguib, Y. W., O’Mary, H. L., Li, X., Niu, M., Ruwona, T. B., & Cui, Z. (2016). Acid-Sensitive Sheddable

    PEGylated PLGA Nanoparticles Increase the Delivery of TNF-α siRNA in Chronic Inflammation Sites. Molecular Therapy -Nucleic Acids, 5(July), e340. https://doi.org/10.1038/mtna.2016.39

    2.Bernardi, D., Salmeron, E., Horikoshi, R. J., Bernardi, O., Dourado, P. M., Carvalho, R. A., … Omoto, C. (2015). Cross-Resistance between Cry1 Proteins in Fall Armyworm (Spodoptera frugiperda) May Affect the Durability of Current Pyramided Bt Maize Hybrids in Brazil. PLOS ONE, 10(10), e0140130. https://doi.org/10.1371/journal.pone.0140130

    3.Carvalho, R. A., Omoto, C., Field, L. M., Williamson, M. S., & Bass, C. (2013). Investigating the Molecular Mechanisms of Organophosphate and Pyrethroid Resistance in the Fall Armyworm Spodoptera frugiperda. PLoS ONE, 8(4). https://doi.org/10.1371/journal.pone.0062268

    4.Fatoretto, J. C., Michel, A. P., Silva Filho, M. C., & Silva, N. (2017). Adaptive Potential of Fall Armyworm (Lepidoptera: Noctuidae) Limits Bt Trait Durability in Brazil. Journal of Integrated Pest Management, 8(1), 17. https://doi.org/10.1093/jipm/pmx011

    5.Kaneda, M. M., Sasaki, Y., Lanza, G. M., Milbrandt, J., & Wickline, S. A. (2010). Mechanisms of nucleotide trafficking during siRNA delivery to endothelial cells using perfluorocarbon nanoemulsions. Biomaterials, 31(11), 3079–3086. https://doi.org/10.1016/j.biomaterials.2010.01.006

    6.Katas, H., & Alpar, H. O. (2006). Development and characterisation of chitosan nanoparticles for siRNA delivery. Journal of Controlled Release, 115(2), 216–225. https://doi.org/10.1016/j.jconrel.2006.07.021

    7.Li, Z., & Blissard, G. W. (2012). Cellular VPS4 Is Required for Efficient Entry and Egress of Budded Virions of Autographacalifornica Multiple Nucleopolyhedrovirus. Journal of Virology, 86(1), 459–472. https://doi.org/10.1128/jvi.06049-11

    8.Mamta, B., & Rajam, M. V. (2017). RNAi technology: a new platform for crop pest control. Physiology and Molecular Biology of Plants, 23(3), 487–501. https://doi.org/10.1007/s12298-017-0443-x

    9.Schmittgen, T. D., & Livak, K. J. (2008). Analyzing real-time PCR data by the comparative CT method. Nature Protocols, 3(6), 1101–1108. https://doi.org/10.1038/nprot.2008.73

    10.Singh, I. K., Singh, S., Mogilicherla, K., Shukla, J. N., & Palli, S. R. (2017). Comparative analysis of double-stranded RNA degradation and processing in insects. Scientific Reports, 7(1), 17059. https://doi.org/10.1038/s41598-017-17134-2

    11.Storer, N. P., Babcock, J. M., Schlenz, M., Meade, T., Thompson, G. D., Bing, J. W., & Huckaba, R. M. (2010). Discovery and Characterization of Field Resistance to Bt Maize: Spodoptera frugiperda (Lepidoptera: Noctuidae) in Puerto Rico. Journal of Economic Entomology, 103(4), 1031–1038. https://doi.org/10.1603/EC10040

    12.Thairu, M. W., Skidmore, I. H., Bansal, R., Nováková, E., Hansen, T. E., Li-Byarlay, H., … Hansen, A. K. (2017). Efficacy of RNA interference knockdown using aerosolized short interfering RNAs bound to nanoparticles in three diverse aphid species. Insect Molecular Biology, 26(3), 356–368. https://doi.org/10.1111/imb.12301

    13.Yoon, J.-S., Gurusamy, D., & Palli, S. R. (2017). Accumulation of dsRNA in endosomes contributes to inefficient RNA interference in the fall armyworm, Spodoptera frugiperda. Insect Biochemistry and Molecular Biology, 90, 53–60. https://doi.org/10.1016/j.ibmb.2017.09.011

    14.Zhang, J., Khan, S. A., Heckel, D. G., & Bock, R. (2017). Next-Generation Insect-Resistant Plants: RNAi-Mediated Crop Protection. Trends in Biotechnology, 35(9), 871–882. https://doi.org/10.1016/j.tibtech.2017.04.009

    15.Zhou, J., Shum, K. T., Burnett, J. C., & Rossi, J. J. (2013). Nanoparticle-based delivery of RNAi therapeutics: Progress and challenges. Pharmaceuticals, 6(1), 85–107. https://doi.org/10.3390/ph6010085

    ACKNOWLEDGEMENTSWe thank the Center of Applied Plant Sciences (CAPS) for the funding for this project.

    Optimizing RNA interference in fall armyworm, Spodopterafrugiperda using improved nanoparticles

    Ana Trabanino1, Yosra A. Helmy2, Gireesh Rajashekara2 & Andy Michel11The Ohio State University, Department of Entomology 2 The Ohio State University, Food Animal Health Research Program

    DEPARTMENT OF ENTOMOLOGY

    Nanoparticles+ siRNA

    FAW larvaeMesh

    Fig. 2. The technique of “Nanoparticle + siRNA complex” delivery to the FAW larvae with the nebulizer compressor.

    0.010

    0.014

    0.018

    0.022

    PFCScram PFCVPSNP

    Expressio

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    siSCRAM siVPS

    Nor

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    expr

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    Treatments

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    0.011

    0.013

    Chscram CHVPSNP

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    0.005

    0.006

    PLGAScram PLGAVPSNP

    Expressio

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    siSCRAM siVPS

    *

    Treatments

    C

    Fig. 3. mRNA expression of VPS gene in FAW larvae aerosolized with A) PFC nanoparticle (P=0.2738), B) Chitosan nanoparticle (P=0.3102) and C) PLGA nanoparticle (P=0.004). All samples were normalized to reference gene RPL11 using Delta Ct method. Samples per treatment=8. Black points represent mRNA normalized expression per larva, red point represents the mean of the mRNA expression in each treatment and red line the standard deviation. NS =not significant. Asterisk represents treatments significantly different. Statistical analysis used Welch two sample t-test.

    Fig. 1. A) Severe damage of one FAW larva in a corn ear (Picture by John C. French 2019. B) Corn foliage damage caused by FAW (Picture by Plantix 2018).

    A B