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    Chapter 5

    Eukaryotic Cells andMicroorganisms

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    Ancient Eukaryotes

    3

    Chloroplasts

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    Andrew Knoll

    Cell wall

    y.

    Andrew Knoll

    (a) (b)

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    Eukaryotic Microbes

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    The Eukaryotic Cell

    Nuclearmembranewith pores

    Nucleolus

    Nucleus

    Centrioles*

    Microvilli/Glycocalyx

    Rough endoplasmicreticulum withribosomes

    MitochondrionCell wall*

    Cell membrane

    Golgi apparatus

    Microtubules

    Chloroplast*

    *Structure not present in all cell types

    Smoothendoplasmicreticulum

    Lysosome

    Microfilaments

    Flagellum*

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    Organization of the Eukaryotic Cell

    6

    Endoplasmic reticulumGolgi complexMitochondriaChloroplasts

    AppendagesFlagellaCilia

    GlycocalyxCapsulesSlimes

    Cell wallCell/cytoplasmic membrane

    Organelles

    Cytoplasmic matrix

    Externalorganelles andother structures

    Boundary of cell

    Nuclear envelopeNucleolusChromosomes

    Nucleus

    Internalorganelles andother contents

    Microtubules

    MicrofilamentsCytoskeleton

    Ribosomes

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    Eukaryotic

    cell

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    External Structures Locomotor appendages: Flagella

    Long, sheathed cylinder containing microtubules in a9+2 arrangement

    Covered by an extension of the cell membrane

    10X thicker than prokaryotic flagella

    Function in motility

    short

    glycocalyxfringe

    ciliarymembrane

    singlet

    B subfiberof doublet

    outerdyneinarm

    (a)

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    y .

    Courtesy Richard Allen

    CellMembrane

    Courtesy Richard Allen

    Microtubules

    Cilium

    bb

    (b)

    (c) Whips back and

    forth and pushesin snakelikepattern

    Twiddles

    the tip

    Lashes, grabs

    the substrate,and pulls

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    Micronucleus

    Oral groove with gullet

    Macronucleus

    Contractile vacuole

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    External Structures Locomotor appendages: Cilia

    Similar in overall structure to flagella, but shorterand more numerous

    Found only on a single group of protozoa andcertain animal cells

    Function in motility, feeding, and filtering

    8(a) Power stroke Recovery stroke(b)

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    9

    External Structures Glycocalyx

    An outermost boundary that comes into direct contactwith environment

    Usually composed of polysaccharides Appears as a network of fibers, a slime layer or a

    capsule Functions in adherence, protection, and signal reception Beneath the glycocalyx

    Fungi and most algae have a thick, rigid cell wall Protozoa, a few algae, and all animal cells lack a cell

    wall and have only a membrane

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    Boundary of the Cell

    Cell wall Rigid, provides structural support and

    shape

    Fungi have thick inner layer of

    polysaccharide fibers composed of chitin orcellulose and a thin layer of mixed glycans

    Algae varies in chemical composition;substances commonly found include

    cellulose, pectin, mannans, silicon dioxide,and calcium carbonate

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    Boundary of the Cell

    Cytoplasmic (cell) membrane Typical bilayer of phospholipids and

    proteins

    Sterols confer stability

    Serves as selectively permeable barrier intransport

    Eukaryotic cells also contain membrane-

    bound organelles that account for 60-80%of their volume

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    Concept Check:

    Which part of the Eukaryotic cell is responsible forcontacting the outside environment and signaling

    between cells?

    A. Flagella

    B. Cell WallC. Glycocalyx

    D. Cell Membrane

    12

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    Internal Structures

    Nucleus Compact sphere, most

    prominent organelle ofeukaryotic cell

    Nuclear envelope

    composed of twoparallel membranesseparated by a narrowspace and is perforatedwith pores

    Containschromosomes

    Nucleolus dark areafor rRNA synthesis and

    ribosome assembly

    Nuclearenvelope

    Endoplasmic reticulum

    Nuclearpore

    Nucleolus

    Chromatin

    (a)

    Don Fawcett/Visuals Unlimited

    Nuclear pore

    Nucleolus Nuclear envelope

    (b)

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    Nuclear changes during Mitosis

    14

    Cleavage furrow

    Chromatin

    Nucleolus

    Nuclear envelope

    Cell membrane

    Cytoplasm

    Daughter cells

    Interphase

    Prophase

    Chromosome

    Earlymetaphase

    Spindle fibers

    Chromosome

    Centromere

    Metaphase

    Early anaphase

    Late anaphase

    Early telophase

    Telophase

    Centrioles

    1

    2

    3

    4

    5

    6

    7

    8

    (resting state priorto cell division)

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    Internal Structures

    Endoplasmic reticulum two types:

    Rough endoplasmic reticulum (RER) originatesfrom the outer membrane of the nuclear envelope

    and extends in a continuous network throughcytoplasm; rough due to ribosomes; proteinssynthesized and shunted into the ER for packagingand transport; first step in secretory pathway

    Smooth endoplasmic reticulum (SER) closedtubular network without ribosomes; functions innutrient processing, synthesis, and storage of lipids

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    Rough endoplasmic reticulum

    16

    (a)

    (b)

    (c)

    RER membrane

    mRNARibosome

    Protein beingsynthesized

    Small subunit

    Large subunit

    Cisterna

    Polyribosomes

    Polyribosomes

    Cisterna

    Nuclear envelopeNuclear pore

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    17

    Internal Structures

    Golgi apparatus

    Modifies, stores, andpackages proteins

    Consists of a stack offlattened sacs calledcisternae

    Transportvesicles

    Endoplasmicreticulum

    Condensingvesicles

    Cisternae

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    Internal Structures

    Transport Processes

    Transitional vesiclesfrom the ER containingproteins go to the Golgi

    apparatus formodification andmaturation

    Condensing vesiclestransport proteins toorganelles or secretoryproteins to the outside

    nucleus RER Golgi vesicles secretion 18

    Ribosomeparts

    Cell membrane

    Secretory vesicle

    Secretion by exocytosis

    Nucleus

    Roughendoplasmicreticulum

    Transitionalvesicles

    Golgiapparatus

    Condensingvesicles

    Nucleolus

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    Internal Structures Lysosomes

    Vesicles containingenzymes that originate fromGolgi apparatus

    Involved in intracellulardigestion of food particles

    and in protection againstinvading microbes

    Vacuoles Membrane bound sacs

    containing particles to bedigested, excreted, or stored

    Phagosome vacuole merged with a

    lysosome

    Food vacuole

    Lysosome

    Merger oflysosome

    and vacuole

    Phagosome

    Digestion

    Digestive vacuole

    Engulfmentof food

    Formation of foodvacuole

    Golgi apparatus

    Food

    particle

    Lysosomes

    Cell membrane

    Nucleus

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    Inner membrane

    CircularDNA strand

    Matrix

    Cristae

    (a) Outer membrane

    70S ribosomes

    20

    Internal Structures Mitochondria

    Function in energyproduction

    Consist of an outermembrane and an

    inner membrane withfolds called cristae

    Cristae hold theenzymes and electroncarriers of aerobicrespiration

    Divide independentlyof cell

    Contain DNA and

    prokaryotic ribosomes

    Cristae

    (darker lines)

    Matrix(lighter spaces)

    (b) Don Fawcett/Visuals Unlimited

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    Internal Structures

    Chloroplast Convert the energy of

    sunlight into chemicalenergy throughphotosynthesis

    Found in algae andplant cells

    Outer membranecovers inner

    membrane folded intosacs,thylakoids,stacked into grana

    Primary producers oforganic nutrients for

    other organisms

    70S ribosomes

    CircularDNA strand

    Granum Thylakoids

    Chloroplast envelope(double membrane)

    Stroma matrix

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    Internal Structures

    Ribosomes Composed of rRNA and proteins

    Scattered in cytoplasm or associated with RER

    Larger than prokaryotic ribosomes Function in protein synthesis

    RER membrane

    mRNARibosome

    Protein beingsynthesized

    Small subunit

    Large subunit

    Cisterna

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    Cellmembrane

    Ribosomes

    Roughendoplasmicreticulum

    Microtubule

    Microfilaments

    Mitochondrion

    (a) 23

    Internal Structures Cytoskeleton

    Flexible framework of proteins, microfilaments andmicrotubules form network throughout cytoplasm

    Involved in movement of cytoplasm, amoeboidmovement, transport, and structural support

    (b)Courtesy of Life Technologies, Carlsbad, CA

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    Comparing Prokaryotes, Eukaryotes & Viruses

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    Concept Check:

    The Eukaryotic organelle that is responsible for transportingvesicles inside the cells is the

    A. Golgi

    B. Smooth Endoplasmic Reticulum

    C. Rough Endoplasmic Reticulum

    D. Nucleus

    25

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    Phylogenetic Relationships between Eukaryotes

    26

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    Naegleria

    Euglena

    Zea (corn)

    Eukarya

    (a)

    EVOLUTIONAR

    YADVANCEMENTOFTHEEUKARYO

    TES

    Animals

    True Fungi

    (Eumycota)

    Plants

    Stramenopiles

    (formerly

    heterokonts

    or chrysophytes)

    Golden-brown and

    yellow-green algaXanthophytes

    Brown algaeDiatoms

    Water molds

    (Oomycota)

    Ciliates

    Colponema

    DinoflagellatesHaplosporidia

    Apicomplexans

    Entamoebids

    AmoeboflagellatesKinetoplastidsEuglenids

    Parabasilids (Trichomonas)

    Diplomonads (Giardia)Oxymonads

    Microsporidia

    Metazoa

    MyxozoaChoanoflagellates

    Zygomycota

    Kingdom Animalia

    Kingdom Eumycota

    Kingdom Plantae

    Kingdom ProtistaDivision Chlorophyta

    Division Rhodophyta

    Division Chrysophyta

    Division PhaeophytaDivision Bacillariophyta

    Division Euglenophyta

    Phylum Sarcomastigophora

    Phylum Ciliophora

    Division Pyrrophyta

    Phylum Apicomplexa

    Traditional Kingdoms

    and Subcategories

    Taxonomy Based on mRNA Analysis

    Ascomycota

    Basidiomycota

    Chytridiomycota(chytrids)

    Land plantsGreen algae

    Cryptomonads

    Red algae

    Alveolates

    Entamoebae

    Universal

    Ancestor

    Lack

    mitochondria

    Phylum Sarcomastigophora

    (b)

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    Survey of Eukaryotic Microbes

    Fungi

    Algae

    Protozoa

    Parasitic worms

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    Kingdom Fungi 100,000 species divided into 2 groups:

    Macroscopic fungi (mushrooms, puffballs, gillfungi)

    Microscopic fungi (molds, yeasts)

    Majority are unicellular or colonial; a few havecellular specialization

    George Barron, University of Guelph, CANADA

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    Microscopic Fungi Exist in two morphologies:

    Yeast round ovoid shape, asexual reproduction

    Hyphae long filamentous fungi or molds

    Some exist in either formdimorphic

    characteristic of some pathogenic molds

    Septum

    Dr. Judy A. Murphy, San Joaquin Delta College, Department of Microscopy, Stocton, CAJanice Carr/CDC

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    Fungal Nutrition

    All are heterotrophic Majority are harmless

    saprobes living off deadplants and animals

    Some are parasites, livingon the tissues of otherorganisms, but none areobligate

    Mycoses fungalinfections

    Extremely widespreaddistribution in manyhabitats

    (a)

    (b)

    Kathy Park Talaro

    New Zealand Dermatological Society

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    F l O i ti

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    Fungal Organization

    Yeast soft, uniform texture and appearance

    Reproduce through an asexual process called budding

    Janice Carr/CDC

    Fungal (Yeast) Cell(a)

    Ribosomes

    Mitochondrion

    Endoplasmicreticulum

    Nucleus

    Nucleolus

    Cell membrane

    Golgi apparatus

    Cell wall

    Storage vacuole

    Bud scarBud

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    Bud

    Nucleus Bud scars

    Pseudohypha(c)

    (b)

    F l O i i

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    Septa

    Septate hyphae

    Nucleus

    NucleiSeptum with pores

    As in Penicillium As in Rhizopus

    Nonseptate hyphae

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    32

    Fungal Organization

    Filamentous fungi mass of hyphae called

    mycelium;cottony, hairy, or velvety texture Hyphae may be divided by cross wallsseptate

    Vegetative hyphae digest and absorb nutrients

    Reproductive hyphae produce spores for reproduction

    32

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    Fungal Reproduction Primarily through spores formed on reproductive

    hyphae Asexual reproduction spores are formed through

    budding or mitosis; conidia or sporangiospores

    George Barron, University of Guelph, CANADA

    (a) Vegetative Hyphae (b) Reproductive Hyphae

    Surfacehyphae

    Submergedhyphae

    Hypha

    Germ tube

    Rhizoids

    Spore

    Substrate

    Spores

    (c) Germination

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    (d)

    T f A l M ld S

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    Types of Asexual Mold Spores

    ArthrosporesChlamydospores Phialospores

    Porospore

    Microconidia

    Macroconidia

    Sporangiophore

    Sporangiospore

    Columella

    Sporangium

    1

    4 5

    1

    2

    2 3

    ConidiaSporangiospore

    Sterigma

    Conidiophore

    Blastospores

    (a) (b)

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    Fungal Reproduction

    Sexual reproduction spores are formedfollowing fusion of two different strains andformation of sexual structure

    Zygospores, ascospores, and basidiospores

    Sexual spores and spore-forming structuresare one basis for classification

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    Formation of zygospores

    Sporangium

    Stolon

    Rhizoid

    + Strain

    Sporesgerminate.

    Germinatingzygospore

    Strain

    Mature zygospore

    Zygote

    Asexual Phase

    Sexual Phase

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    Production of ascospores

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    Production of ascospores

    Ascospores

    Asci

    Fruitingbody

    Cup fungus

    Antheridium (male)

    + Hypha

    Ascogonium(female)

    Sterile hyphae

    Ascogenoushyphae

    Hypha

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    Zygote nucleithat undergo meiosis

    prior to formationof asci

    Formation of basidiospores in a mushroom

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    Formation of basidiospores in a mushroom

    Pair of nuclei fuseto form diploid nucleus.

    Basidium

    Portion of gillcovered withbasidia

    Cap

    Gill

    Annulus

    Stalk

    + Basidiospore

    Button

    Basidiospore

    Basidium

    Diploid nucleusundergoes meiosisto produce fourhaploid nuclei.

    Soil,plantlitter

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    Basidiospore

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    Fungal Classification

    Kingdom Eumycota is subdivided into several phylabased upon the type of sexual reproduction:

    1. Phylum Zygomycota zygospores; mostlysporangiospores and some conidia

    2. Phylum Ascomycota ascospores; conidia

    3. Phylum Basidiomycota basidiospores; conidia

    4. Phylum Chytridomycota flagellated spores

    5. Fungi that produce only Asexual Spores (Imperfect)

    Di it f F i

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    Chytrid cells

    Diatom cell

    10.0 mm

    Diversity of Fungi

    40

    Kathy Park Talaro George Barron, University of Guelph, CANADA George Barron, University of Guelph, CANADA

    Gregory M. Filip Joyce E. Longcore, University of Maine

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    Fungal Identification

    Isolation on specific media Macroscopic and microscopic observation of:

    Asexual spore-forming structures and spores

    Hyphal type Colony texture and pigmentation

    Physiological characteristics

    Genetic makeup

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    Roles of Fungi

    Adverse impact Mycoses, allergies, toxin production

    Destruction of crops and food storages

    Beneficial impact

    Decomposers of dead plants and animals

    Sources of antibiotics, alcohol, organic acids,vitamins

    Used in making foods and in genetic studies

    Human Fungal Infections

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    Human Fungal Infections

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    Concept Check:

    Fungi are generally classified according to their

    A. Type of sexual spore

    B. Type of asexual spore

    C. Type of hyphae

    D. Type of habitat

    44

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    The Protists

    Algae - eukaryoticorganisms, usuallyunicellular and colonial,that photosynthesize

    with chlorophyll a Protozoa - unicellular

    eukaryotes that lacktissues and share

    similarities in cellstructure, nutrition, lifecycle, and biochemistry

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    EVOLUTIONARY

    ADVANCEMENTOFTHEEUKARYOTE

    S

    Animals

    True Fungi

    (Eumycota)

    Plants

    Stramenopiles

    (formerly

    heterokonts

    or chrysophytes)

    Golden-brown and

    yellow-green algaXanthophytes

    Brown algaeDiatoms

    Water molds(Oomycota)

    Ciliates

    Colponema

    Dinoflagellates

    Haplosporidia

    Apicomplexans

    Entamoebids

    Amoeboflagellates

    KinetoplastidsEuglenids

    Parabasilids (Trichomonas)

    Diplomonads (Giardia)Oxymonads

    Microsporidia

    Metazoa

    Myxozoa

    Choanoflagellates

    Zygomycota

    Kingdom Animalia

    Kingdom Eumycota

    Kingdom Plantae

    Kingdom Protista

    Division Chlorophyta

    Division Rhodophyta

    Division Chrysophyta

    Division PhaeophytaDivision Bacillariophyta

    Division Euglenophyta

    Phylum Sarcomastigophora

    Phylum Ciliophora

    Division Pyrrophyta

    Phylum Apicomplexa

    Traditional Kingdoms

    and Subcategories

    Taxonomy Based on mRNA Analysis

    Ascomycota

    BasidiomycotaChytridiomycota

    (chytrids)

    Land plantsGreen algae

    Cryptomonads

    Red algae

    Alveolates

    Entamoebae

    UniversalAncestor

    Lack

    mitochondria

    Phylum Sarcomastigophora

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    Algae

    Photosynthetic organisms Microscopic forms are

    unicellular, colonial,filamentous

    Macroscopic forms arecolonial and multicellular

    Contain chloroplasts withchlorophyll and otherpigments

    Cell wall

    May or may not haveflagella

    Ribosomes

    Flagellum

    Cytoplasm

    Nucleus

    Nucleolus

    Golgi

    apparatus

    Cell membrane

    Mitochondrion

    Starch vacuoles

    Cell wall

    Chloroplast

    Algal Cell(a)

    (b)

    Jan Hinsch/Photo Researchers, Inc

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    Algae

    Most are free-living infresh and marine waterplankton

    Provide basis of food webin most aquatic habitats

    Produce large proportionof atmospheric O2

    Dinoflagellates can causered tides and give off

    toxins that cause foodpoisoning withneurological symptoms

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    Classified according to types of pigments and cell wall Used for cosmetics, food, and medical products

    Algae Classification

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    Protozoa

    Diverse group of 65,000 species Vary in shape, lack a cell wall

    Most are unicellular; colonies are rare

    Most are harmless, free-living in a moist habitat

    Some are animal parasites and can be spread byinsect vectors

    All are heterotrophic lack chloroplasts

    Cytoplasm divided into ectoplasm and endoplasm Feed by engulfing other microbes and organic

    matter

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    Protozoa

    Most have locomotorstructures flagella, cilia,or pseudopods

    Exist as trophozoitemotile feeding stage

    Many can enter into adormant resting stagewhen conditions areunfavorable for growth andfeedingcyst

    All reproduce asexually,mitosis or multiple fission;many also reproducesexuallyconjugation

    Trophozoiteis reactivated.

    Trophozoite(active, feeding stage)

    Cell rounds up,loses motility.

    Cyst wallbreaks open.

    Mature cyst(dormant, resting stage)

    Early cyst wallformation

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    Protozoan Identification Classification is difficult because of diversity

    Simple grouping is based on method of motility,reproduction, and life cycle

    1. Mastigophora primarily flagellar motility, someflagellar and amoeboid; sexual reproduction

    2. Sarcodina primarily amoeba; asexual by fission;most are free-living

    3. Ciliophora cilia; trophozoites and cysts; most arefree-living, harmless

    4. Apicomplexa motility is absent except malegametes; sexual and asexual reproduction; complexlife cycle all parasitic

    Mastigophora

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    Mastigophora

    Protozoan Cell(a)

    Cell membrane

    Glycocalyx

    Ribosomes

    Mitochondrion

    Endoplasmicreticulum

    NucleusPellicle

    Nucleolus

    Cell membrane

    Golgi apparatus

    Water vacuole

    Centrioles

    Flagellum

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    (b)Janice Carr/CDC

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    Sarcodina

    53

    Nucleus

    Food vacuoles

    ContractilevacuolesPseudopods(a) (b)

    David Patterson/MBL/Biological Discovery in Woods Hole

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    Ciliophora

    54

    (a)

    Oral ciliain groove

    Gullet

    Food

    vacuoles

    Macronucleus

    Micronucleus

    Watervacuole

    Eric Russell, BioMEDIA ASSOCIATES

    Copyright The McGraw-Hill Companies, Inc. Permission required for reproduction or display.

    Yuuji Tsukii, Protist Information Server

    (b)

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    Apicomplexa

    55

    (a)

    Cytostome(mouth)

    Foodvacuole

    Endoplasmicreticulum

    Nucleus

    Cell membrane

    Mitochondrion

    Cytostome Food vacuoles Nucleus

    (b)Michael Riggs et al, Infection and Immunity, Vol. 62, #5, May 1994, p. 1931

    ASM

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    Pathogenic Protozoa

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    Pathogenic Protozoa

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    Important Protozoan Pathogens

    Pathogenicflagellates Trypanosomes

    Trypanosoma

    T. bruceiAfricansleeping sickness

    T. cruziChagasdisease; SouthAmerica

    (a) InfectiveTrypanosome

    (b) Mode ofinfection

    Cycle inthe Wild

    Reduviidbug

    Cycle inHuman

    Dwellings

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    Important Protozoan Pathogens

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    Important Protozoan Pathogens

    Infective amoebas Entamoeba

    histolytica amebicdysentery; worldwide

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    Cysts infood, water

    (a)

    Trophozoitesreleased

    (b)

    Largeintestinesite ofinfection

    Eaten

    Food,water Feces

    Cysts exitMature cysts

    Smallintestine

    Maturetrophozoites

    Stomach

    (c)

    (d)

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    Concept Check:

    Which of the following descriptions is true of both Algaeand Protozoa?

    A. They are both photosynthetic

    B. They are both always unicellular

    C. They both contain mitochondria

    D. They are both heterotrophs

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    Parasitic Helminths

    Multicellular animals, organs for reproduction,digestion, movement, protection

    Parasitize host tissues

    Have mouthparts for attachment to or

    digestion of host tissues Most have well-developed sex organs that

    produce eggs and sperm

    Fertilized eggs go through larval period in or

    out of host body

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    Major Groups of Parasitic Helminths

    1. Flatworms flat, no definite body cavity;digestive tract a blind pouch; simple excretoryand nervous systems

    Cestodes (tapeworms)

    Trematodes or flukes, are flattened, nonsegmentedworms with sucking mouthparts

    2. Roundworms (nematodes) round, acomplete digestive tract, a protective surface

    cuticle, spines and hooks on mouth; excretoryand nervous systems poorly developed

    Helminth Classification and

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    Helminth Classification and

    Identification

    Classify according to shape, size, organ development,presence of hooks, suckers, or other special structures, modeof reproduction, hosts, and appearance of eggs and larvae

    Identify by microscopic detection of worm, larvae, or eggs

    Esophagus

    Ventralsucker

    Cuticle

    Uterus

    Testes

    (b)(a)

    Scolex

    Cuticle

    Proglottid

    Fertile eggsImmature eggsSuckers

    Pharynx

    Intestine

    Vas deferens

    Ovary

    Seminalreceptacle

    Excretory

    bladder

    Oral sucker

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    Distribution and Importance of

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    Distribution and Importance ofParasitic Worms

    Approximately 50 species parasitize humans

    Distributed worldwide; some restricted to certaingeographic regions with higher incidence in

    tropics

    Acquired through ingestion of larvae or eggs infood; from soil or water; some are carried by

    insect vectors Afflict billions of humans

    Lifecycle of the Pinworm

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    Lifecycle of the Pinworm

    Cross-infection

    Self-

    infection

    Fertileegg

    FemaleAnus

    Copulatory

    spicule

    MaleEggs

    Mouth

    Cuticle Mouth

    Autoinoculation

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    Concept Check:

    Helminths are in the Domain ________ and

    in the Kingdom ___________.